Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,486,295	T→C	D446G (GAC→GGC)	yjgR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,486,295	0	T	C	90.6%	956.3 / 68.8	372	D446G (GAC→GGC)	yjgR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (18/17); new base C (156/181); total (174/198)
Fisher's exact test for biased strand distribution p-value = 5.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 385 total aligned reads displayed.

TTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCG  >  NC_000913/4486203‑4486384

   tGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCAt                                                                                        >  2:3935263/1‑93 (MQ=255)

    ggCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATc                                                                                       <  2:4812590/93‑1 (MQ=255)

       cATTGTTTGCACCACGCCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAc                                                                                    <  1:8201957/93‑1 (MQ=255)

       cATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAc                                                                                    <  2:1313525/93‑1 (MQ=255)

        aTTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAcc                                                                                   >  1:8899797/1‑93 (MQ=255)

        aTTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAcc                                                                                   <  2:9357931/93‑1 (MQ=255)

        aTTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAcc                                                                                   <  2:4503453/93‑1 (MQ=255)

         ttGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCg                                                                                  >  1:2650950/1‑93 (MQ=255)

         ttGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAccc                                                                                  >  1:8171837/1‑92 (MQ=255)

         ttGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCg                                                                                  >  1:3116538/1‑93 (MQ=255)

         gtGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCg                                                                                  >  2:6161415/2‑93 (MQ=255)

             ttGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTAc                                                                              <  2:8198729/93‑1 (MQ=255)

               gCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCACTCCACCAAGAATGCCGTCATCCACCGCTACct                                                                            >  1:5285969/1‑93 (MQ=255)

               gCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACct                                                                            >  1:1484921/1‑93 (MQ=255)

                caccacaccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACctc                                                                           >  1:9383804/1‑93 (MQ=255)

                 accacaccaTCTTTCTTCCTGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCCATCCACCAAGAATGCCGCCATCCACCGCTACctct                                                                          >  2:3577987/1‑93 (MQ=255)

                 accacaccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACctct                                                                          >  2:8709029/1‑93 (MQ=255)

                   caccccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCttt                                                                        <  2:3776436/93‑1 (MQ=255)

                   cacaccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCttt                                                                        >  2:5171938/1‑93 (MQ=255)

                     caccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTcc                                                                      <  2:5826338/93‑1 (MQ=255)

                      cccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTccc                                                                     <  1:4475328/92‑1 (MQ=255)

                      cccaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTccc                                                                     <  1:6712838/92‑1 (MQ=255)

                      accaTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTccc                                                                     >  2:9710660/1‑93 (MQ=255)

                         aTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCttt                                                                  <  2:5558050/93‑1 (MQ=255)

                          tctttcttCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTc                                                                 >  2:7485461/1‑93 (MQ=255)

                          tctttcttCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTc                                                                 >  1:7669127/1‑93 (MQ=255)

                            tttcttCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTcgc                                                               >  1:6588650/1‑93 (MQ=255)

                            tttcttCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTcgc                                                               >  1:1900916/1‑93 (MQ=255)

                            tttcttCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTcgc                                                               <  1:7226333/93‑1 (MQ=255)

                             ttcttcCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTcgcg                                                              >  2:4287181/1‑93 (MQ=255)

                              tcttcCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCgg                                                             <  1:1656592/93‑1 (MQ=255)

                                ttcCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGgga                                                           <  1:9080345/93‑1 (MQ=255)

                                 tcCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGggag                                                          <  1:4979968/93‑1 (MQ=255)

                                   ccgccgCGTGGTCCGGTAGTGCCGAACAAAATATCTTTCAATCCACCAACAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGggagga                                                        <  1:9986652/93‑1 (MQ=255)

                                   ccgccgCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGggagga                                                        <  1:7837824/93‑1 (MQ=255)

                                     gccgcGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGatt                                                      <  1:989287/93‑1 (MQ=255)

                                     gccgcGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGatt                                                      <  2:1758419/93‑1 (MQ=255)

                                     gccgcGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGatt                                                      <  2:6896098/93‑1 (MQ=255)

                                      ccgcGTGGTCCGGTAGTGTCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGatta                                                     <  2:2244614/93‑1 (MQ=255)

                                       cgcgTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGattat                                                    >  1:8388590/1‑93 (MQ=255)

                                        gcgTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGattatt                                                   >  2:341638/1‑93 (MQ=255)

                                        gcgTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGattatt                                                   <  1:8550001/93‑1 (MQ=255)

                                        gcgTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGattatt                                                   <  1:9127494/93‑1 (MQ=255)

                                         cgTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTAttt                                                  <  2:4704477/93‑1 (MQ=255)

                                          gTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTAtttt                                                 >  2:8513720/1‑93 (MQ=255)

                                               ccGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTtgctgc                                            >  1:1356012/1‑93 (MQ=255)

                                               ccGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTtgctgc                                            <  1:6971658/93‑1 (MQ=255)

                                               ccGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTtgctgc                                            <  1:5025680/93‑1 (MQ=255)

                                                 ggTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTc                                          >  2:2459996/1‑93 (MQ=255)

                                                  gTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCg                                         >  1:10027134/1‑93 (MQ=255)

                                                  gTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCg                                         <  1:5139757/93‑1 (MQ=255)

                                                       gCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACt                                    <  1:4148808/93‑1 (MQ=255)

                                                       gCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCATTTCGCGGGAGGATTATTTTGCTGCTCGGTACt                                    >  2:2967424/1‑93 (MQ=255)

                                                         cGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTgg                                  >  1:3521336/1‑93 (MQ=255)

                                                         cGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTgg                                  <  1:6276427/93‑1 (MQ=255)

                                                         cGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTgg                                  <  1:8277379/93‑1 (MQ=255)

                                                           aaCAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGcc                                <  1:1182429/93‑1 (MQ=255)

                                                           aaCAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGcc                                <  2:2600506/93‑1 (MQ=255)

                                                            aCAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCt                               >  2:910498/1‑93 (MQ=255)

                                                            aCAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGATACTGGCCt                               >  1:5603740/1‑93 (MQ=255)

                                                              aaaaTATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGa                             >  1:7454784/1‑93 (MQ=255)

                                                                   atCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGcc                        >  1:2808160/1‑93 (MQ=255)

                                                                      cTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCttt                     <  1:6801563/93‑1 (MQ=255)

                                                                      cTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCttt                     <  2:6546936/93‑1 (MQ=255)

                                                                       ttCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCtttt                    >  1:7978004/1‑93 (MQ=255)

                                                                       ttCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCtttt                    <  2:602650/93‑1 (MQ=255)

                                                                       ttCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCtttt                    <  2:3193448/93‑1 (MQ=255)

                                                                       ttCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCtttt                    <  2:8272383/93‑1 (MQ=255)

                                                                        tCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCttttt                   >  2:3048546/1‑93 (MQ=255)

                                                                         cAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTATTg                  <  2:7239423/93‑1 (MQ=255)

                                                                          aaTCCTCCAAGACTGCACCCATCCACCGCTACCTCTTTCCCTGTCGCGGGAGTATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGc                 <  2:1618581/93‑1 (MQ=255)

                                                                          aaTCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGc                 >  2:1488361/1‑93 (MQ=255)

                                                                          aaTCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGc                 >  1:3825342/1‑93 (MQ=255)

                                                                          aaTCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGACTTTTCGc                 >  2:2385958/1‑93 (MQ=255)

                                                                           aTCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCTCGGGAGGATGATTTTGGTGCTCGGTACTGGCCTGAAAGCCTTTTTGCa                >  2:7751605/1‑93 (MQ=255)

                                                                            tCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCTGTACTGGCCTGAAAAACTTTTTTCaa               >  1:4845821/1‑93 (MQ=255)

                                                                            tCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCaa               >  2:7988947/1‑93 (MQ=255)

                                                                            tCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCaa               >  1:8680512/1‑93 (MQ=255)

                                                                            tCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCaa               <  2:2889332/93‑1 (MQ=255)

                                                                              caccaAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACa             <  2:3118902/93‑1 (MQ=255)

                                                                               accaAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAt            >  2:7079138/1‑93 (MQ=255)

                                                                                ccaAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAtc           <  1:6224945/93‑1 (MQ=255)

                                                                                ccaAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAtc           <  2:7878377/93‑1 (MQ=255)

                                                                                 caAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAtct          <  1:2514045/93‑1 (MQ=255)

                                                                                 caAGAATGCCGCCATCCACCGCCACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAtct          >  1:5810655/1‑93 (MQ=255)

                                                                                  aaGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAtctc         <  1:106850/93‑1 (MQ=255)

                                                                                  aaGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAtctc         >  1:2231701/1‑93 (MQ=255)

                                                                                   aGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCa        <  1:2324275/93‑1 (MQ=255)

                                                                                    gAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCAt       <  2:2026603/93‑1 (MQ=255)

                                                                                     aaggccgccATCCACCGCTACCTCTTTCCCTTTGGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATa      <  2:88791/90‑1 (MQ=255)

                                                                                     aaTGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATa      <  2:5866682/93‑1 (MQ=255)

                                                                                     aaTGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATa      <  2:4953742/93‑1 (MQ=255)

                                                                                     aaTGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATa      >  1:9686753/1‑93 (MQ=255)

                                                                                      aTGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAg     <  2:2226615/93‑1 (MQ=255)

                                                                                      aTGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAg     <  1:6401393/93‑1 (MQ=255)

                                                                                      aTGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAg     >  1:2023677/1‑93 (MQ=255)

                                                                                       tGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAgg    >  1:3027293/1‑93 (MQ=255)

                                                                                       tGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAgg    <  2:6662438/93‑1 (MQ=255)

                                                                                        gccgccATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGc   >  1:5480123/1‑93 (MQ=255)

                                                                                        gCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTGCTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGc   <  1:3740032/93‑1 (MQ=255)

TTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCG  >  NC_000913/4486203‑4486384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 222 total aligned reads displayed.

CTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGATT  >  NC_000913/4486202‑4486388

CTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGC                                                                                               >  SRR4302540.9682547/1‑94 (MQ=60)

CTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGC                                                                                               >  SRR4302540.4175695/1‑94 (MQ=60)

CTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGC                                                                                               >  SRR4302540.8099189/1‑94 (MQ=60)

 TTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCC                                                                                              <  SRR4302540.3021652/94‑1 (MQ=60)

 TTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCC                                                                                              <  SRR4302540.8976554/94‑1 (MQ=60)

 TTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCC                                                                                              >  SRR4302540.9350811/1‑94 (MQ=60)

  tgcggccatggttggcagCACACCGTCTTTCTTCCCGCCGCGTGGGCCGGTAGTGCCGAACAAAATATCCATCAATCCACCAATAATGCCGCCA                                                                                             <  SRR4302540.382935/76‑1 (MQ=60)

   TTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCAT                                                                                            >  SRR4302540.2539792/1‑94 (MQ=60)

    TGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATC                                                                                           >  SRR4302540.8364475/1‑94 (MQ=60)

    TGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATC                                                                                           >  SRR4302540.1128731/1‑94 (MQ=60)

     GGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCC                                                                                          >  SRR4302540.3149674/1‑94 (MQ=60)

      GCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCA                                                                                         <  SRR4302540.3012467/94‑1 (MQ=60)

       CCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCAC                                                                                        <  SRR4302540.1246056/94‑1 (MQ=60)

       CCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAC                                                                                        <  SRR4302540.8283983/94‑1 (MQ=60)

       CCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCAC                                                                                        >  SRR4302540.7652395/1‑94 (MQ=60)

        CATTGTTTGCACCACGCCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACC                                                                                       <  SRR4302540.8297268/94‑1 (MQ=60)

        CATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACC                                                                                       <  SRR4302540.8503986/94‑1 (MQ=60)

        CATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACC                                                                                       <  SRR4302540.6677765/94‑1 (MQ=60)

        CATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACC                                                                                       <  SRR4302540.8297269/94‑1 (MQ=60)

        CATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACC                                                                                       >  SRR4302540.9002825/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCG                                                                                      >  SRR4302540.2679709/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCG                                                                                      >  SRR4302540.8266751/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCG                                                                                      <  SRR4302540.6900186/94‑1 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCG                                                                                      >  SRR4302540.89729/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCG                                                                                      >  SRR4302540.5923318/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCG                                                                                      >  SRR4302540.3620756/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCG                                                                                      >  SRR4302540.3150612/1‑94 (MQ=60)

         ATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCC                                                                                      >  SRR4302540.8266750/1‑94 (MQ=60)

          TTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGC                                                                                     >  SRR4302540.5070685/1‑94 (MQ=60)

          TTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGC                                                                                     >  SRR4302540.9272522/1‑94 (MQ=60)

           TGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCT                                                                                    >  SRR4302540.181235/1‑94 (MQ=60)

            GTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTA                                                                                   <  SRR4302540.4848797/94‑1 (MQ=60)

             tttgcaccgcgctgTCTTTCTTCCCGCCGCGTGGGCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTAC                                                                                  <  SRR4302540.2185325/80‑1 (MQ=60)

              TTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACC                                                                                 >  SRR4302540.6153626/1‑94 (MQ=60)

               TGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCACTCCACCAAGAATGCCGTCATCCACCGCTACCT                                                                                >  SRR4302540.5343726/1‑94 (MQ=60)

               TGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCT                                                                                >  SRR4302540.1501225/1‑94 (MQ=60)

                GCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTC                                                                               >  SRR4302540.9495494/1‑94 (MQ=60)

                 CACCACGCCCTCTTTGTTCCCGCCGCGTGGGCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATTCCGCCATCCACCGCTACCTCT                                                                              <  SRR4302540.8365431/94‑1 (MQ=60)

                 CACCACACCATCTTTCTTCCCGGCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCT                                                                              >  SRR4302540.1860592/1‑94 (MQ=60)

                   CCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTT                                                                            <  SRR4302540.1526295/94‑1 (MQ=60)

                    CACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTC                                                                           <  SRR4302540.8210111/94‑1 (MQ=60)

                     CCACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCC                                                                          <  SRR4302540.7513403/94‑1 (MQ=60)

                      CACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCC                                                                         >  SRR4302540.5135564/1‑94 (MQ=60)

                       CCCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCT                                                                        <  SRR4302540.4523877/94‑1 (MQ=60)

                       CCCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCT                                                                        <  SRR4302540.6786913/94‑1 (MQ=60)

                       CCCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCT                                                                        <  SRR4302540.239374/94‑1 (MQ=60)

                       ACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCT                                                                        >  SRR4302540.5003995/1‑94 (MQ=60)

                         CATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTT                                                                      <  SRR4302540.5869110/94‑1 (MQ=60)

                         CATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTT                                                                      >  SRR4302540.2982802/1‑94 (MQ=60)

                          CTCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCTTCCACCGCTACCTCTTTCCCTTTC                                                                     <  SRR4302540.1940704/94‑1 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTCCCTCTTTCCCTTTC                                                                     <  SRR4302540.1476489/94‑1 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTC                                                                     >  SRR4302540.7755570/1‑94 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTC                                                                     <  SRR4302540.9450368/94‑1 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTC                                                                     <  SRR4302540.2290556/94‑1 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTC                                                                     >  SRR4302540.7755569/1‑94 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTC                                                                     >  SRR4302540.3427161/1‑94 (MQ=60)

                          ATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTC                                                                     >  SRR4302540.267313/1‑94 (MQ=60)

                           TCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCG                                                                    <  SRR4302540.9684558/94‑1 (MQ=60)

                            CTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGC                                                                   >  SRR4302540.6661627/1‑94 (MQ=60)

                            CTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGC                                                                   >  SRR4302540.1921704/1‑94 (MQ=60)

                             TTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCG                                                                  <  SRR4302540.6575679/94‑1 (MQ=60)

                             TTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCG                                                                  <  SRR4302540.7306909/94‑1 (MQ=60)

                             TTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCG                                                                  <  SRR4302540.2732861/94‑1 (MQ=60)

                              TTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGG                                                                 >  SRR4302540.712172/1‑94 (MQ=60)

                              TTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGG                                                                 <  SRR4302540.5049018/94‑1 (MQ=60)

                              TTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGG                                                                 >  SRR4302540.1110464/1‑94 (MQ=60)

                              TTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGG                                                                 <  SRR4302540.151594/94‑1 (MQ=60)

                               TCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGG                                                                <  SRR4302540.1674645/94‑1 (MQ=60)

                                CTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGA                                                               >  SRR4302540.3828529/1‑94 (MQ=60)

                                CTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGA                                                               >  SRR4302540.1208048/1‑94 (MQ=60)

                                 TTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAG                                                              <  SRR4302540.9189426/94‑1 (MQ=60)

                                  TCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGG                                                             <  SRR4302540.5033876/94‑1 (MQ=60)

                                  TCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGG                                                             >  SRR4302540.1309584/1‑94 (MQ=60)

                                   CCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGA                                                            <  SRR4302540.6047539/94‑1 (MQ=60)

                                    CCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCTTTCAATCCACCAACAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGAT                                                           <  SRR4302540.10103071/94‑1 (MQ=60)

                                    CCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGAT                                                           <  SRR4302540.6322390/94‑1 (MQ=60)

                                    CCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGAT                                                           >  SRR4302540.6762365/1‑94 (MQ=60)

                                    CCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGAT                                                           <  SRR4302540.7929399/94‑1 (MQ=60)

                                    CCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGAT                                                           <  SRR4302540.7929398/94‑1 (MQ=60)

                                      GCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTA                                                         <  SRR4302540.1435123/94‑1 (MQ=60)

                                      GCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTA                                                         >  SRR4302540.2292827/1‑94 (MQ=60)

                                       CCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTAT                                                        >  SRR4302540.8485923/1‑94 (MQ=60)

                                        CGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATT                                                       >  SRR4302540.7900932/1‑94 (MQ=60)

                                        CGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATT                                                       <  SRR4302540.6460411/94‑1 (MQ=60)

                                        CGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATT                                                       <  SRR4302540.5027087/94‑1 (MQ=60)

                                        CGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATT                                                       >  SRR4302540.3374739/1‑94 (MQ=60)

                                         GCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTT                                                      >  SRR4302540.305925/1‑94 (MQ=60)

                                         GCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTT                                                      <  SRR4302540.8649320/94‑1 (MQ=60)

                                         GCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTT                                                      >  SRR4302540.3601721/1‑94 (MQ=60)

                                         GCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTT                                                      <  SRR4302540.9237206/94‑1 (MQ=60)

                                          GGTGGCCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTT                                                     <  SRR4302540.2581548/94‑1 (MQ=60)

                                          CGTGGTCCTGTATTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTT                                                     <  SRR4302540.5202163/94‑1 (MQ=60)

                                          CGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTT                                                     >  SRR4302540.8007033/1‑94 (MQ=60)

                                          CGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTT                                                     <  SRR4302540.6330155/94‑1 (MQ=60)

                                          CGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTT                                                     <  SRR4302540.7265910/94‑1 (MQ=60)

                                          CGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTT                                                     <  SRR4302540.5202164/94‑1 (MQ=60)

                                           GTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTG                                                    >  SRR4302540.4815811/1‑94 (MQ=60)

                                            TGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGC                                                   <  SRR4302540.407265/94‑1 (MQ=60)

                                              GTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTG                                                 <  SRR4302540.8486319/94‑1 (MQ=60)

                                               TCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGC                                                >  SRR4302540.3848765/1‑94 (MQ=60)

                                               TCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGC                                                >  SRR4302540.1370298/1‑94 (MQ=60)

                                                CCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCT                                               <  SRR4302540.7049143/94‑1 (MQ=60)

                                                CCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCT                                               <  SRR4302540.5080079/94‑1 (MQ=60)

                                                 CGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTC                                              >  SRR4302540.8451034/1‑94 (MQ=60)

                                                 CGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTC                                              >  SRR4302540.2047889/1‑94 (MQ=60)

                                                  GGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCG                                             >  SRR4302540.10143800/1‑94 (MQ=60)

                                                   GTAGTGTCTATCAAAATATCCTTCAATCCACCAATAATGCCCCCCTCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGG                                            <  SRR4302540.1534408/94‑1 (MQ=60)

                                                   GTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGG                                            <  SRR4302540.755168/94‑1 (MQ=60)

                                                   GTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGG                                            <  SRR4302540.5626182/94‑1 (MQ=60)

                                                    TAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGT                                           <  SRR4302540.9941514/94‑1 (MQ=60)

                                                    TAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGT                                           <  SRR4302540.9941515/94‑1 (MQ=60)

                                                      GTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTAC                                         >  SRR4302540.8183335/1‑94 (MQ=60)

                                                        GCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTCGCTGCTCGGTACTG                                       <  SRR4302540.6791445/94‑1 (MQ=60)

                                                         CCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGG                                      >  SRR4302540.3559714/1‑94 (MQ=60)

                                                         CCGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGG                                      <  SRR4302540.234745/94‑1 (MQ=60)

                                                          CGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGC                                     >  SRR4302540.5599002/1‑94 (MQ=60)

                                                          CGAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGC                                     <  SRR4302540.6346252/94‑1 (MQ=60)

                                                           GAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCC                                    >  SRR4302540.6329262/1‑94 (MQ=60)

                                                           AAACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCC                                    <  SRR4302540.2328599/94‑1 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCT                                   <  SRR4302540.6402592/94‑1 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCT                                   >  SRR4302540.5126088/1‑94 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCT                                   <  SRR4302540.5483825/94‑1 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCT                                   <  SRR4302540.1194636/94‑1 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCT                                   <  SRR4302540.6799891/94‑1 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCT                                   <  SRR4302540.6402591/94‑1 (MQ=60)

                                                            AACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGATACTGGCCT                                   >  SRR4302540.5665400/1‑94 (MQ=60)

                                                             ACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTG                                  >  SRR4302540.9195029/1‑94 (MQ=60)

                                                             ACAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCCCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTG                                  >  SRR4302540.9195030/1‑94 (MQ=60)

                                                              CAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGA                                 >  SRR4302540.5114227/1‑94 (MQ=60)

                                                              CAAAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGA                                 >  SRR4302540.7537895/1‑94 (MQ=60)

                                                                AAATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAA                               <  SRR4302540.1696452/94‑1 (MQ=60)

                                                                 AATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAG                              <  SRR4302540.7853296/94‑1 (MQ=60)

                                                                  ATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGC                             >  SRR4302540.838937/1‑94 (MQ=60)

                                                                  ATATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGC                             >  SRR4302540.2117012/1‑94 (MQ=60)

                                                                   TATCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCC                            >  SRR4302540.2838486/1‑94 (MQ=60)

                                                                     TCCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTT                          >  SRR4302540.961743/1‑94 (MQ=60)

                                                                      CCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGATGATTATTTTGCTTCTCGGTACTGGCCTGAAAGTCTTT                         >  SRR4302540.5365835/1‑94 (MQ=60)

                                                                      CCTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTT                         <  SRR4302540.6480369/94‑1 (MQ=60)

                                                                       CTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGTAAGCCTTTT                        >  SRR4302540.4236540/1‑94 (MQ=60)

                                                                       CTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTT                        <  SRR4302540.6876819/94‑1 (MQ=60)

                                                                       CTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTT                        <  SRR4302540.8421366/94‑1 (MQ=60)

                                                                       CTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTT                        >  SRR4302540.7122690/1‑94 (MQ=60)

                                                                       CTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTT                        <  SRR4302540.8567841/94‑1 (MQ=60)

                                                                       CTTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTT                        >  SRR4302540.8070943/1‑94 (MQ=60)

                                                                        TTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTT                       <  SRR4302540.5513977/94‑1 (MQ=60)

                                                                        TTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTT                       >  SRR4302540.5070077/1‑94 (MQ=60)

                                                                        TTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTT                       >  SRR4302540.4766642/1‑94 (MQ=60)

                                                                        TTCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTT                       >  SRR4302540.7977675/1‑94 (MQ=60)

                                                                         TCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTG                      >  SRR4302540.10042068/1‑94 (MQ=60)

                                                                         TCAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTG                      <  SRR4302540.6951402/94‑1 (MQ=60)

                                                                          CAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGC                     >  SRR4302540.5244729/1‑94 (MQ=60)

                                                                          CAATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGC                     >  SRR4302540.3866971/1‑94 (MQ=60)

                                                                           AATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCA                    >  SRR4302540.4458390/1‑94 (MQ=60)

                                                                            ATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCTGTACTGGCCTGAAAAACTTTTTTCAA                   >  SRR4302540.4897734/1‑94 (MQ=60)

                                                                            ATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAA                   >  SRR4302540.8781324/1‑94 (MQ=60)

                                                                            ATCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAA                   >  SRR4302540.8781325/1‑94 (MQ=60)

                                                                             TCCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAAC                  <  SRR4302540.1424688/94‑1 (MQ=60)

                                                                              CCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACA                 <  SRR4302540.3977797/94‑1 (MQ=60)

                                                                              CCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACA                 >  SRR4302540.395633/1‑94 (MQ=60)

                                                                              CCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACA                 <  SRR4302540.8744855/94‑1 (MQ=60)

                                                                              CCACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACA                 <  SRR4302540.8744853/94‑1 (MQ=60)

                                                                               CACCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACAT                <  SRR4302540.9150846/94‑1 (MQ=60)

                                                                                CCCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATC               <  SRR4302540.3039717/94‑1 (MQ=60)

                                                                                 CCAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGACTTTTTGCAACATCT              >  SRR4302540.2596725/1‑94 (MQ=60)

                                                                                 CCAAGAATGCCGCCATCCACCGCCACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCT              >  SRR4302540.5874878/1‑94 (MQ=60)

                                                                                  CAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTC             <  SRR4302540.2541207/94‑1 (MQ=60)

                                                                                  CAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTC             >  SRR4302540.2255728/1‑94 (MQ=60)

                                                                                  CAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTC             >  SRR4302540.10058489/1‑94 (MQ=60)

                                                                                  CAAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTC             >  SRR4302540.1079132/1‑94 (MQ=60)

                                                                                   AAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCA            <  SRR4302540.7511323/94‑1 (MQ=60)

                                                                                   AAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCA            <  SRR4302540.8799943/94‑1 (MQ=60)

                                                                                   AAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCA            >  SRR4302540.10052359/1‑94 (MQ=60)

                                                                                   AAGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCA            <  SRR4302540.107997/94‑1 (MQ=60)

                                                                                    AGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCAT           <  SRR4302540.3857279/94‑1 (MQ=60)

                                                                                    AGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCAT           <  SRR4302540.1040564/94‑1 (MQ=60)

                                                                                    AGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCAT           >  SRR4302540.6711438/1‑94 (MQ=60)

                                                                                    AGAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCAT           <  SRR4302540.4225548/94‑1 (MQ=60)

                                                                                     GAATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATA          >  SRR4302540.9800708/1‑94 (MQ=60)

                                                                                      AATGCCGNCNNCCACCGCTACNNNTNTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAG         <  SRR4302540.5429816/94‑1 (MQ=60)

                                                                                      AATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAG         <  SRR4302540.9905444/94‑1 (MQ=60)

                                                                                      AATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAG         >  SRR4302540.2045544/1‑94 (MQ=60)

                                                                                      AATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAG         >  SRR4302540.9230652/1‑94 (MQ=60)

                                                                                       ATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGG        >  SRR4302540.3060542/1‑94 (MQ=60)

                                                                                       ATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGG        <  SRR4302540.8148228/94‑1 (MQ=60)

                                                                                       ATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGG        <  SRR4302540.6472643/94‑1 (MQ=60)

                                                                                       ATGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGG        >  SRR4302540.2759785/1‑94 (MQ=60)

                                                                                        TTCCGCCATCCCCCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTCAAAGCCTTTTTGCAACATCTCATAGGC       <  SRR4302540.958967/94‑1 (MQ=60)

                                                                                        TGCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGC       >  SRR4302540.5540444/1‑94 (MQ=60)

                                                                                         GCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTGCTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCG      <  SRR4302540.3780833/94‑1 (MQ=60)

                                                                                         GCCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCG      <  SRR4302540.5703933/94‑1 (MQ=60)

                                                                                          CCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGG     <  SRR4302540.3683006/94‑1 (MQ=60)

                                                                                          CCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGG     >  SRR4302540.5960022/1‑94 (MQ=60)

                                                                                          CCGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGG     >  SRR4302540.3228661/1‑94 (MQ=60)

                                                                                           CGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGA    >  SRR4302540.7544958/1‑94 (MQ=60)

                                                                                           CGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGA    >  SRR4302540.7544959/1‑94 (MQ=60)

                                                                                           CGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGA    <  SRR4302540.7340991/94‑1 (MQ=60)

                                                                                           CGCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGA    >  SRR4302540.6685956/1‑94 (MQ=60)

                                                                                            GCCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGAT   >  SRR4302540.3197109/1‑94 (MQ=60)

                                                                                             CCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGATT  >  SRR4302540.8383690/1‑94 (MQ=60)

                                                                                             CCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTCTTTGCAACATCTCATAGGCGGATT  >  SRR4302540.8697272/1‑94 (MQ=60)

CTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAATGCCGTCATCCACCGCTACCTCTTTCCCTTTCGCGGGAGGATTATTTTGCTGCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGATT  >  NC_000913/4486202‑4486388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`