Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,502,304	(T)_5→6	coding (679/1218 nt)	b4279 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,502,299	1	.	T	99.0%	2121.3 / 8.4	574	coding (674/1218 nt)	b4279	putative transport protein
Reads supporting (aligned to +/- strand): ref base . (2/4); new base T (296/272); total (298/276)
Fisher's exact test for biased strand distribution p-value = 4.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 667 total aligned reads displayed.

GTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑T‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTC  >  NC_000913/4502207‑4502386

 tGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t                                                                                         <  1:5531515/93‑1 (MQ=255)

  ggATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑t                                                                                       <  2:3584876/93‑1 (MQ=255)

   gATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tt                                                                                      <  2:3183967/93‑1 (MQ=255)

    aTTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑ttt                                                                                     >  1:7269794/1‑93 (MQ=255)

     ttGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tttt                                                                                    <  1:3098607/93‑1 (MQ=255)

      tGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑ttttt                                                                                   >  2:1162033/1‑92 (MQ=255)

       gAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tttttg                                                                                  >  2:6672947/1‑91 (MQ=255)

        aaGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tttttgt                                                                                 >  2:2978938/1‑90 (MQ=255)

         aGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tttttgtc                                                                                >  1:8229190/1‑89 (MQ=255)

         aGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tttttgtc                                                                                >  1:2931638/1‑89 (MQ=255)

         aGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑t‑tttttgtc                                                                                >  2:2864590/1‑89 (MQ=255)

            tAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTAt                                                                              >  2:8732947/1‑93 (MQ=255)

            tAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTAt                                                                              <  2:429669/93‑1 (MQ=255)

             aaaTATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTAtt                                                                             <  2:5830412/93‑1 (MQ=255)

              aaTATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTAttt                                                                            <  1:6673634/93‑1 (MQ=255)

              aaTATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTAttt                                                                            >  2:5475181/1‑93 (MQ=255)

               atatAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTg                                                                           >  2:7700089/1‑93 (MQ=255)

                tataAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTgg                                                                          <  1:1897538/93‑1 (MQ=255)

                tataAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTgg                                                                          <  1:990509/93‑1 (MQ=255)

                 ataAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGt                                                                         <  1:6108350/93‑1 (MQ=255)

                 ataAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGt                                                                         >  1:1196313/1‑93 (MQ=255)

                  taAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTg                                                                        >  1:1757406/1‑93 (MQ=255)

                   aaGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGc                                                                       <  1:2624226/93‑1 (MQ=255)

                      gATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCaaa                                                                    >  1:2328894/1‑93 (MQ=255)

                      gATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCaaa                                                                    >  1:6340809/1‑93 (MQ=255)

                       aTAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAAGCTCTATGATCATTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAAc                                                                   <  2:8125555/93‑1 (MQ=255)

                        tAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACt                                                                  >  1:1618787/1‑93 (MQ=255)

                        tAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACt                                                                  >  2:9318101/1‑93 (MQ=255)

                         aaaTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTg                                                                 <  2:220616/93‑1 (MQ=255)

                         aaaTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTg                                                                 >  1:9500707/1‑93 (MQ=255)

                            tCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGcc                                                              <  2:3426629/93‑1 (MQ=255)

                            tCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGcc                                                              <  2:1643219/93‑1 (MQ=255)

                            tCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCCATGATCGGTTTCCTCGTC‑TGG‑T‑GGTTGTCTATGTGGTGCAAACTGGcc                                                              >  2:8930768/1‑93 (MQ=255)

                              aaCATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGa                                                            >  2:9080703/1‑93 (MQ=255)

                               aCATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGAt                                                           >  1:5656100/1‑93 (MQ=255)

                                 aTTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATaa                                                         >  1:5445954/1‑93 (MQ=255)

                                  tttttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATaat                                                        >  2:4035574/1‑92 (MQ=255)

                                  tttttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATaaa                                                        <  1:8067156/93‑1 (MQ=255)

                                  tttttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGCGCAAACTGGCCGATaaa                                                        >  1:7973351/1‑93 (MQ=255)

                                  tgtttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATaaa                                                        <  2:9824974/91‑1 (MQ=255)

                                   ttttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAAc                                                       <  1:4472488/93‑1 (MQ=255)

                                    tttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACg                                                      <  1:8921581/93‑1 (MQ=255)

                                       gtctgtctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGac                                                   >  1:783852/1‑93 (MQ=255)

                                       gtctgtctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGac                                                   <  1:8637479/93‑1 (MQ=255)

                                        tctgtctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGact                                                  <  2:8346440/93‑1 (MQ=255)

                                            tctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActt                                              >  1:9104012/1‑93 (MQ=255)

                                            tctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActt                                              <  1:4678683/93‑1 (MQ=255)

                                            tctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActt                                              >  2:649982/1‑93 (MQ=255)

                                              ttCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtcc                                            >  1:9161862/1‑93 (MQ=255)

                                              ttCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtcc                                            >  1:146829/1‑93 (MQ=255)

                                              ttCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtcc                                            >  2:6256911/1‑93 (MQ=255)

                                                  gAAAACCCCATCTTTCAATCTCTACGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACttccttcc                                        <  2:8543055/93‑1 (MQ=255)

                                                  aaaaaCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACttccttcc                                        <  1:6893151/92‑1 (MQ=255)

                                                   aaaaCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTtccttcct                                       >  2:5253735/1‑93 (MQ=255)

                                                    aaaCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTa                                      >  1:6041853/1‑93 (MQ=255)

                                                     atccACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTAc                                     <  2:4408612/91‑1 (MQ=255)

                                                     aaCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTAc                                     <  1:3557547/93‑1 (MQ=255)

                                                        cacaTCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTGCTTCCTACCTg                                  >  2:5637549/1‑93 (MQ=255)

                                                        cacaTCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTg                                  <  2:6078218/93‑1 (MQ=255)

                                                          caTCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGc                                <  2:5153095/93‑1 (MQ=255)

                                                           aTCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCa                               >  2:6543979/1‑93 (MQ=255)

                                                             cTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGATGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGa                             <  1:3839712/93‑1 (MQ=255)

                                                             cTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑TGTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGa                             <  1:9678457/93‑1 (MQ=255)

                                                               ttCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATa                           <  2:7331085/93‑1 (MQ=255)

                                                                tCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATaa                          >  2:1784817/1‑93 (MQ=255)

                                                                tCAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATaa                          <  1:10018652/93‑1 (MQ=255)

                                                                 cAATCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAAt                         >  2:3037505/1‑93 (MQ=255)

                                                                  aaTCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATg                        >  2:7579707/1‑93 (MQ=255)

                                                                  aaTCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATg                        >  1:8477732/1‑93 (MQ=255)

                                                                   aTCTCTATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATgg                       <  2:7858809/93‑1 (MQ=255)

                                                                     ctctATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAg                     >  1:6453775/1‑93 (MQ=255)

                                                                      tctATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGt                    >  1:7561565/1‑93 (MQ=255)

                                                                      tctATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGt                    >  2:2756729/1‑93 (MQ=255)

                                                                       ctATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGtt                   >  2:4587718/1‑93 (MQ=255)

                                                                        tATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTATCTGGCAGATAATGGAGTTa                  >  1:5021862/1‑93 (MQ=255)

                                                                        tATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTa                  <  2:4719447/93‑1 (MQ=255)

                                                                        tATGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTa                  <  1:4194600/93‑1 (MQ=255)

                                                                         aTGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTaa                 >  1:3356505/1‑93 (MQ=255)

                                                                         aTGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTaa                 <  2:1970105/93‑1 (MQ=255)

                                                                          tGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAt                <  1:1988329/93‑1 (MQ=255)

                                                                          tGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAt                >  1:5938866/1‑93 (MQ=255)

                                                                          tGATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAt                <  2:8248839/93‑1 (MQ=255)

                                                                           gATCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATa               <  2:1001150/93‑1 (MQ=255)

                                                                            aTCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATAc              >  1:4412537/1‑93 (MQ=255)

                                                                             tCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACa             <  1:4770878/93‑1 (MQ=255)

                                                                             tCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACa             <  2:3802359/93‑1 (MQ=255)

                                                                             tCGTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACa             >  2:495722/1‑93 (MQ=255)

                                                                               gTTTTCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGt           >  1:3237778/1‑93 (MQ=255)

                                                                                ttttCCTCGTCTT‑T‑T‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          <  1:9311082/93‑1 (MQ=255)

                                                                                ttttCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          <  1:272376/93‑1 (MQ=255)

                                                                                ttttCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          >  1:52890/1‑93 (MQ=255)

                                                                                ttttCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          >  2:5351337/1‑93 (MQ=255)

                                                                                 tttCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTgg         <  1:2151298/93‑1 (MQ=255)

                                                                                   tCCTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTc       >  1:704918/1‑93 (MQ=255)

                                                                                     cTCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAt     >  2:6947112/1‑93 (MQ=255)

                                                                                      tCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAtt    >  2:1366305/1‑93 (MQ=255)

                                                                                      tCGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAtt    <  2:2602918/93‑1 (MQ=255)

                                                                                       cGTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAttt   <  2:7108738/93‑1 (MQ=255)

                                                                                        gTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTc  >  2:951160/1‑93 (MQ=255)

                                                                                        gTC‑T‑GTT‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTc  >  2:5024712/1‑93 (MQ=255)

GTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTC‑T‑G‑T‑TTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTC  >  NC_000913/4502207‑4502386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 375 total aligned reads displayed.

ATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGA  >  NC_000913/4502211‑4502397

ATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTT                                                                                               >  SRR4302540.4674280/1‑94 (MQ=60)

ATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTT                                                                                               >  SRR4302540.1563411/1‑94 (MQ=60)

ATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTT                                                                                               >  SRR4302540.704133/1‑94 (MQ=60)

ATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTT                                                                                               >  SRR4302540.5530772/1‑94 (MQ=60)

 TTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGACAACCACATCTTTCAATCTCTATGATCGTTTTCCTCTTCTG‑T‑T‑TTTT                                                                                              >  SRR4302540.8162859/1‑94 (MQ=60)

 TTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTT                                                                                              <  SRR4302540.4992050/94‑1 (MQ=60)

 TTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTT                                                                                              <  SRR4302540.2158477/94‑1 (MQ=60)

 TTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTT                                                                                              <  SRR4302540.1815248/94‑1 (MQ=60)

 TTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTT                                                                                              <  SRR4302540.6256872/94‑1 (MQ=60)

 TTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTT                                                                                              >  SRR4302540.6803068/1‑94 (MQ=60)

  TGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTtg                                                                                             >  SRR4302540.8141429/1‑92 (MQ=60)

  TGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTtg                                                                                             >  SRR4302540.2259582/1‑92 (MQ=60)

  TGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTtg                                                                                             >  SRR4302540.4778311/1‑92 (MQ=60)

    AAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTC                                                                                            >  SRR4302540.2963799/1‑94 (MQ=60)

    AAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTC                                                                                            >  SRR4302540.6166264/1‑94 (MQ=60)

    AAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTC                                                                                            >  SRR4302540.8324846/1‑94 (MQ=60)

     AGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCT                                                                                           >  SRR4302540.7729393/1‑94 (MQ=60)

       ATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTAT                                                                                         >  SRR4302540.3398391/1‑94 (MQ=60)

       ATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTAT                                                                                         <  SRR4302540.5715805/94‑1 (MQ=60)

        TAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATT                                                                                        <  SRR4302540.7811034/94‑1 (MQ=60)

         AAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTT                                                                                       <  SRR4302540.8497758/94‑1 (MQ=60)

         AAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTT                                                                                       >  SRR4302540.7880493/1‑94 (MQ=60)

         AAATATAAGGATAAATCAAAATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTT                                                                                       <  SRR4302540.414030/94‑1 (MQ=60)

          AATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTG                                                                                      <  SRR4302540.6747367/94‑1 (MQ=60)

           ATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGG                                                                                     >  SRR4302540.2702447/1‑94 (MQ=60)

           ATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGG                                                                                     >  SRR4302540.4814794/1‑94 (MQ=60)

            TATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGT                                                                                    <  SRR4302540.1000617/94‑1 (MQ=60)

            TATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGT                                                                                    >  SRR4302540.1208624/1‑94 (MQ=60)

             ATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTG                                                                                   <  SRR4302540.3276844/94‑1 (MQ=60)

             ATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTG                                                                                   <  SRR4302540.6176379/94‑1 (MQ=60)

             ATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTG                                                                                   >  SRR4302540.1776454/1‑94 (MQ=60)

              TAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGC                                                                                  >  SRR4302540.809987/1‑94 (MQ=60)

              TAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGC                                                                                  >  SRR4302540.9387109/1‑94 (MQ=60)

              TAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGC                                                                                  >  SRR4302540.1867885/1‑94 (MQ=60)

              TAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGC                                                                                  >  SRR4302540.1690062/1‑94 (MQ=60)

               AAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCA                                                                                 >  SRR4302540.3106996/1‑94 (MQ=60)

               AAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCA                                                                                 >  SRR4302540.3663236/1‑94 (MQ=60)

               AAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCA                                                                                 <  SRR4302540.2652604/94‑1 (MQ=60)

                AGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAA                                                                                >  SRR4302540.2681919/1‑94 (MQ=60)

                AGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAA                                                                                <  SRR4302540.5234949/94‑1 (MQ=60)

                 GGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAA                                                                               >  SRR4302540.2833446/1‑94 (MQ=60)

                 GGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAA                                                                               >  SRR4302540.2898419/1‑94 (MQ=60)

                 GGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAA                                                                               >  SRR4302540.2353980/1‑94 (MQ=60)

                  GATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAAC                                                                              >  SRR4302540.3004533/1‑94 (MQ=60)

                  GATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAAC                                                                              <  SRR4302540.193936/94‑1 (MQ=60)

                   ATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACT                                                                             >  SRR4302540.1636542/1‑94 (MQ=60)

                   ATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACT                                                                             <  SRR4302540.9255996/94‑1 (MQ=60)

                   ATAAATCAACATTTTTGTCTGTCGTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑TGTTTGTCTATTTGGTGCAAACT                                                                             <  SRR4302540.1671988/94‑1 (MQ=60)

                     AAATCAACATTTTTGTCTGTCTTCAGAAACCCACGTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGG                                                                           <  SRR4302540.5399387/94‑1 (MQ=60)

                     AAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGG                                                                           >  SRR4302540.4466003/1‑94 (MQ=60)

                      AATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGC                                                                          >  SRR4302540.6525272/1‑94 (MQ=60)

                       atttttttttttttttttaaaaaaaaccctcttttttaaattcttTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCC                                                                         <  SRR4302540.9188857/49‑1 (MQ=60)

                        TCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCG                                                                        <  SRR4302540.8096279/94‑1 (MQ=60)

                         CAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGA                                                                       >  SRR4302540.9259441/1‑94 (MQ=60)

                         CAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGA                                                                       >  SRR4302540.8709131/1‑94 (MQ=60)

                          AACATTTTTGTCTTTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGAT                                                                      <  SRR4302540.6525931/94‑1 (MQ=60)

                          AACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGAT                                                                      <  SRR4302540.8990766/94‑1 (MQ=60)

                           ACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATA                                                                     >  SRR4302540.6183767/1‑94 (MQ=60)

                           ACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATA                                                                     <  SRR4302540.6111261/94‑1 (MQ=60)

                            CATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAA                                                                    >  SRR4302540.2437040/1‑94 (MQ=60)

                            CATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAA                                                                    <  SRR4302540.7159833/94‑1 (MQ=60)

                             ATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAA                                                                   >  SRR4302540.8066247/1‑94 (MQ=60)

                              TTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAAC                                                                  <  SRR4302540.7299240/94‑1 (MQ=60)

                              TTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAAC                                                                  <  SRR4302540.970625/94‑1 (MQ=60)

                              TTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAAC                                                                  <  SRR4302540.9307502/94‑1 (MQ=60)

                               TTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACG                                                                 >  SRR4302540.1358491/1‑94 (MQ=60)

                               TTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACG                                                                 <  SRR4302540.9370913/94‑1 (MQ=60)

                               TTGTGTCTGTCTTCAGAAAACCACATCTTTTAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACG                                                                 <  SRR4302540.7009752/94‑1 (MQ=60)

                                TTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGG                                                                <  SRR4302540.9025023/94‑1 (MQ=60)

                                  TGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGAC                                                              >  SRR4302540.792187/1‑94 (MQ=60)

                                   GTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACT                                                             >  SRR4302540.2144174/1‑94 (MQ=60)

                                   GTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACT                                                             <  SRR4302540.8737815/94‑1 (MQ=60)

                                     CTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTct                                                           >  SRR4302540.3331444/1‑92 (MQ=60)

                                     CTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTAC                                                           >  SRR4302540.7132364/1‑94 (MQ=60)

                                     CTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTAC                                                           >  SRR4302540.3260922/1‑94 (MQ=60)

                                      TGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACT                                                          >  SRR4302540.6285012/1‑94 (MQ=60)

                                      TGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACT                                                          >  SRR4302540.9969543/1‑94 (MQ=60)

                                        TCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTC                                                        >  SRR4302540.3513659/1‑94 (MQ=60)

                                        TCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTC                                                        <  SRR4302540.4728740/94‑1 (MQ=60)

                                         CTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCC                                                       >  SRR4302540.2226498/1‑94 (MQ=60)

                                          TTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCT                                                      <  SRR4302540.2735184/94‑1 (MQ=60)

                                          TTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCT                                                      >  SRR4302540.9230619/1‑94 (MQ=60)

                                          TTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCT                                                      <  SRR4302540.1138546/94‑1 (MQ=60)

                                             AGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCC                                                   >  SRR4302540.150883/1‑94 (MQ=60)

                                             AGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTCGCCGATAAACGGACTACTTCCTTCC                                                   <  SRR4302540.6009444/94‑1 (MQ=60)

                                              GAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCT                                                  <  SRR4302540.1592370/94‑1 (MQ=60)

                                              GAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCT                                                  <  SRR4302540.1903693/94‑1 (MQ=60)

                                              AAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCT                                                  <  SRR4302540.6969631/94‑1 (MQ=60)

                                               AAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTA                                                 >  SRR4302540.6108954/1‑94 (MQ=60)

                                               AAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTA                                                 <  SRR4302540.6777094/94‑1 (MQ=60)

                                               AAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTA                                                 >  SRR4302540.4421047/1‑94 (MQ=60)

                                               AAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACCGACTACTctcctcatc                                                 >  SRR4302540.8349945/1‑85 (MQ=60)

                                                AAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTAC                                                >  SRR4302540.2594777/1‑94 (MQ=60)

                                                 AACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACC                                               <  SRR4302540.3596417/94‑1 (MQ=60)

                                                 AACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACC                                               <  SRR4302540.1468581/94‑1 (MQ=60)

                                                 AACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACC                                               <  SRR4302540.10094258/94‑1 (MQ=60)

                                                 AACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACC                                               <  SRR4302540.8023093/94‑1 (MQ=60)

                                                 AACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACC                                               <  SRR4302540.10094260/94‑1 (MQ=60)

                                                  ACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCT                                              <  SRR4302540.4530222/94‑1 (MQ=60)

                                                  ACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCT                                              <  SRR4302540.1301327/94‑1 (MQ=60)

                                                  ACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCT                                              >  SRR4302540.5596853/1‑94 (MQ=60)

                                                   CCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTG                                             >  SRR4302540.3103384/1‑94 (MQ=60)

                                                   CCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTG                                             <  SRR4302540.2180563/94‑1 (MQ=60)

                                                    cccagtttttAATCTCTATGGTCGTTTTCATCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGG                                            <  SRR4302540.3517998/84‑1 (MQ=60)

                                                    CACATCTTTTAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGG                                            <  SRR4302540.9106080/94‑1 (MQ=60)

                                                    CACATCTTTCAATGTCTATGATCGTTGTCCTCGACTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGG                                            <  SRR4302540.534807/94‑1 (MQ=60)

                                                    CACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGG                                            <  SRR4302540.5740412/94‑1 (MQ=60)

                                                    CACATCTTTCAATCTCGATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGG                                            <  SRR4302540.4818310/94‑1 (MQ=60)

                                                     ACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTACTACCTGGC                                           >  SRR4302540.66609/1‑94 (MQ=60)

                                                      CATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCA                                          <  SRR4302540.5518088/94‑1 (MQ=60)

                                                      CATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCA                                          >  SRR4302540.6373689/1‑94 (MQ=60)

                                                       ATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAG                                         >  SRR4302540.8868552/1‑94 (MQ=60)

                                                       ATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAG                                         >  SRR4302540.611689/1‑94 (MQ=60)

                                                       ATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAG                                         >  SRR4302540.2061341/1‑94 (MQ=60)

                                                        TCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGA                                        <  SRR4302540.5677531/94‑1 (MQ=60)

                                                        TCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGA                                        >  SRR4302540.6058539/1‑94 (MQ=60)

                                                         CTTTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGATGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGAT                                       <  SRR4302540.3881470/94‑1 (MQ=60)

                                                         CTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑TGT‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGAT                                       <  SRR4302540.9792327/94‑1 (MQ=60)

                                                           TTCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAA                                     <  SRR4302540.8423999/94‑1 (MQ=60)

                                                            TCAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAAT                                    <  SRR4302540.10135262/94‑1 (MQ=60)

                                                             CAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATG                                   >  SRR4302540.8576199/1‑94 (MQ=60)

                                                             CAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATG                                   <  SRR4302540.4190849/94‑1 (MQ=60)

                                                             CAATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATG                                   >  SRR4302540.7894570/1‑94 (MQ=60)

                                                              AATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGG                                  <  SRR4302540.9618711/94‑1 (MQ=60)

                                                              AATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGG                                  >  SRR4302540.1924797/1‑94 (MQ=60)

                                                              AATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGG                                  <  SRR4302540.3541931/94‑1 (MQ=60)

                                                               ATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGA                                 >  SRR4302540.5211152/1‑94 (MQ=60)

                                                               ATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGA                                 >  SRR4302540.1992294/1‑94 (MQ=60)

                                                               ATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGA                                 <  SRR4302540.821201/94‑1 (MQ=60)

                                                               ATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGA                                 >  SRR4302540.5016177/1‑94 (MQ=60)

                                                               ATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGA                                 <  SRR4302540.3979919/94‑1 (MQ=60)

                                                               ATCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGA                                 >  SRR4302540.9512889/1‑94 (MQ=60)

                                                                TCTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAG                                >  SRR4302540.6525615/1‑94 (MQ=60)

                                                                 CTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGT                               >  SRR4302540.7646377/1‑94 (MQ=60)

                                                                 CTCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGT                               >  SRR4302540.4718027/1‑94 (MQ=60)

                                                                  TCTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTT                              >  SRR4302540.6436037/1‑94 (MQ=60)

                                                                   CTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTATCTGGCAGATAATGGAGTTA                             >  SRR4302540.5076223/1‑94 (MQ=60)

                                                                   CTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTA                             <  SRR4302540.8157664/94‑1 (MQ=60)

                                                                   CTATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTA                             >  SRR4302540.3480545/1‑94 (MQ=60)

                                                                    TATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAA                            >  SRR4302540.4352032/1‑94 (MQ=60)

                                                                    TATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAA                            >  SRR4302540.9738477/1‑94 (MQ=60)

                                                                    TATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAA                            <  SRR4302540.2007047/94‑1 (MQ=60)

                                                                    TATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAA                            <  SRR4302540.8650905/94‑1 (MQ=60)

                                                                    TATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAA                            <  SRR4302540.4240230/94‑1 (MQ=60)

                                                                     ATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAT                           >  SRR4302540.5554665/1‑94 (MQ=60)

                                                                     ATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAT                           >  SRR4302540.6004514/1‑94 (MQ=60)

                                                                     ATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAT                           <  SRR4302540.9482178/94‑1 (MQ=60)

                                                                     ATGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAT                           <  SRR4302540.9561061/94‑1 (MQ=60)

                                                                      TGATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATA                          >  SRR4302540.3263662/1‑94 (MQ=60)

                                                                       GATCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTACAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATAA                         >  SRR4302540.8022565/1‑94 (MQ=60)

                                                                         TCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAG                       <  SRR4302540.9149377/94‑1 (MQ=60)

                                                                         TCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAG                       <  SRR4302540.4821841/94‑1 (MQ=60)

                                                                         TCGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAG                       <  SRR4302540.6672161/94‑1 (MQ=60)

                                                                          CGTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGT                      <  SRR4302540.547924/94‑1 (MQ=60)

                                                                           GTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCTAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTG                     >  SRR4302540.7498944/1‑94 (MQ=60)

                                                                           GTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTG                     <  SRR4302540.100452/94‑1 (MQ=60)

                                                                           GTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTG                     >  SRR4302540.53417/1‑94 (MQ=60)

                                                                           GTTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTG                     <  SRR4302540.5881169/94‑1 (MQ=60)

                                                                            TTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGG                    <  SRR4302540.4484523/94‑1 (MQ=60)

                                                                            TTTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGG                    <  SRR4302540.275058/94‑1 (MQ=60)

                                                                             TTTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGT                   >  SRR4302540.2212032/1‑94 (MQ=60)

                                                                              TTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTC                  <  SRR4302540.957933/94‑1 (MQ=60)

                                                                              TTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTC                  >  SRR4302540.712485/1‑94 (MQ=60)

                                                                              TTCCTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTC                  >  SRR4302540.922399/1‑94 (MQ=60)

                                                                                 CTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATT               >  SRR4302540.7521597/1‑94 (MQ=60)

                                                                                 CTCGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATT               <  SRR4302540.4463834/94‑1 (MQ=60)

                                                                                   CGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTC             >  SRR4302540.682855/1‑94 (MQ=60)

                                                                                   CGTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTC             >  SRR4302540.335039/1‑94 (MQ=60)

                                                                                    GTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCA            >  SRR4302540.8779876/1‑94 (MQ=60)

                                                                                    GTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCA            >  SRR4302540.1072625/1‑94 (MQ=60)

                                                                                    GTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCA            >  SRR4302540.7573874/1‑94 (MQ=60)

                                                                                    GTCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCA            >  SRR4302540.2482818/1‑94 (MQ=60)

                                                                                     TCTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAA           <  SRR4302540.139658/94‑1 (MQ=60)

                                                                                      CTGTT‑T‑TTTGTCTATTTGGTGCGAACTGGCCGATAAACGGAATACATCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAAC          <  SRR4302540.9071157/94‑1 (MQ=60)

                                                                                      CTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAAC          <  SRR4302540.511598/94‑1 (MQ=60)

                                                                                      CTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAAC          >  SRR4302540.6717331/1‑94 (MQ=60)

                                                                                      CTGTT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTCCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAAC          <  SRR4302540.1109707/94‑1 (MQ=60)

                                                                                       tgtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACT         >  SRR4302540.5766486/4‑94 (MQ=60)

                                                                                       tgtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACT         >  SRR4302540.3370574/4‑94 (MQ=60)

                                                                                        gtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTC        <  SRR4302540.9849960/92‑1 (MQ=60)

                                                                                        gtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTC        <  SRR4302540.1261843/92‑1 (MQ=60)

                                                                                        gtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTC        >  SRR4302540.3195707/3‑94 (MQ=60)

                                                                                        gtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTC        <  SRR4302540.3273523/92‑1 (MQ=60)

                                                                                        gtT‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTC        >  SRR4302540.6428690/3‑94 (MQ=60)

                                                                                        T‑T‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCT       <  SRR4302540.3595796/94‑1 (MQ=60)

                                                                                        T‑T‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCT       <  SRR4302540.9143129/94‑1 (MQ=60)

                                                                                        T‑T‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCT       <  SRR4302540.6496333/94‑1 (MQ=60)

                                                                                          T‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTG      <  SRR4302540.3797483/94‑1 (MQ=60)

                                                                                            T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGA     <  SRR4302540.3011847/94‑1 (MQ=60)

                                                                                              TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGCTCATGGAGCTAATACAGTGGTCATTTCAACTCTGAT    >  SRR4302540.5555540/1‑94 (MQ=60)

                                                                                              TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGAT    <  SRR4302540.5062866/94‑1 (MQ=60)

                                                                                              TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGAT    <  SRR4302540.4040995/94‑1 (MQ=60)

                                                                                              TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGAT    <  SRR4302540.598039/94‑1 (MQ=60)

                                                                                              TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGAT    <  SRR4302540.7219059/94‑1 (MQ=60)

                                                                                               TTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATG   <  SRR4302540.8270415/94‑1 (MQ=60)

                                                                                               TTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATG   <  SRR4302540.3169504/94‑1 (MQ=60)

                                                                                               TTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATG   >  SRR4302540.3034353/1‑94 (MQ=60)

                                                                                               TTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATG   >  SRR4302540.4292499/1‑94 (MQ=60)

                                                                                                TGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGA  >  SRR4302540.3350857/1‑94 (MQ=60)

                                                                                                TGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGA  >  SRR4302540.8606700/1‑94 (MQ=60)

ATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTG‑T‑T‑TTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGA  >  NC_000913/4502211‑4502397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`