Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,520,082	A→G	H527H (CAT→CAC)	yjhG ←	putative dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,520,082	0	A	G	99.7%	1263.2 / ‑5.1	389	H527H (CAT→CAC)	yjhG	putative dehydratase
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (193/195); total (193/196)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.22e-01

Only 100 of 398 total aligned reads displayed.

GGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG  >  NC_000913/4519993‑4520174

gggCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGc                                                                                           <  2:8334817/93‑1 (MQ=255)

    cTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTAc                                                                                       <  1:328522/93‑1 (MQ=255)

     tCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTAcc                                                                                      <  2:4919650/93‑1 (MQ=255)

     tCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTAcc                                                                                      >  1:6045804/1‑93 (MQ=255)

     tCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTAcc                                                                                      >  2:2132784/1‑93 (MQ=255)

     tCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCAGTGATTAACGAAACGTGCTTAcc                                                                                      >  2:6710028/1‑93 (MQ=255)

        ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTa                                                                                   <  2:9259381/93‑1 (MQ=255)

        ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTa                                                                                   <  2:7779996/93‑1 (MQ=255)

        ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCCAGAAACGTGCATCGGTGATTAACGAAACGTGATTACCGTa                                                                                   >  1:6813961/1‑93 (MQ=255)

         gCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTAt                                                                                  <  1:9105234/93‑1 (MQ=255)

          ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATg                                                                                 <  1:1886180/93‑1 (MQ=255)

           cAGCGCTGCTGGCACCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGa                                                                                <  2:5400926/93‑1 (MQ=255)

             gcgcTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACa                                                                              >  2:7328523/1‑93 (MQ=255)

             gcgcTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACa                                                                              <  1:5838012/93‑1 (MQ=255)

              cgcTTCTGGACCCACAAGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAg                                                                             <  1:8971130/93‑1 (MQ=255)

                cTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGAt                                                                           >  1:7294078/1‑93 (MQ=255)

                 ttCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATg                                                                          >  1:10041458/1‑93 (MQ=255)

                  tCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGc                                                                         <  2:1415948/93‑1 (MQ=255)

                      gCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCa                                                                     <  2:8198043/93‑1 (MQ=255)

                      gCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCa                                                                     >  2:2988888/1‑93 (MQ=255)

                       ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCTGAGAAACGTGCATCGGGGATTAACGAAAGGTGCTTACCGTATGAGAGATGCTTCAg                                                                    >  2:407829/1‑93 (MQ=255)

                       ccccACATGGCAGGTGCAGACGCCAGTAGAAACGCTCGAGACACGTGCATCGGTGATTAACGAAACGGGCTTACCGTATGTCAGATGCTTCAg                                                                    <  2:4009857/93‑1 (MQ=255)

                         ccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg                                                                  <  2:5230302/93‑1 (MQ=255)

                         ccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg                                                                  <  2:1035871/93‑1 (MQ=255)

                         ccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg                                                                  >  1:720314/1‑93 (MQ=255)

                         ccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg                                                                  >  1:7322355/1‑93 (MQ=255)

                          cacaTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGc                                                                 <  2:7161847/93‑1 (MQ=255)

                           acaTGGCGGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCa                                                                <  1:374373/93‑1 (MQ=255)

                           acaTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCa                                                                >  2:418005/1‑93 (MQ=255)

                            caTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCAc                                                               <  2:3386971/93‑1 (MQ=255)

                              tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg                                                             >  2:7898354/1‑93 (MQ=255)

                              tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg                                                             >  1:2127552/1‑93 (MQ=255)

                              tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg                                                             >  2:946128/1‑93 (MQ=255)

                              tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg                                                             >  1:7859101/1‑93 (MQ=255)

                                gCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGt                                                           <  1:9390730/93‑1 (MQ=255)

                                gCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGt                                                           <  2:7081886/93‑1 (MQ=255)

                                 ccGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTa                                                          <  1:8676234/93‑1 (MQ=255)

                                  cGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTaa                                                         <  1:9897060/93‑1 (MQ=255)

                                   gATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAc                                                        >  1:2330954/1‑93 (MQ=255)

                                   gATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAc                                                        >  1:50296/1‑93 (MQ=255)

                                    aTGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAcc                                                       <  2:8813736/93‑1 (MQ=255)

                                    aTGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAcc                                                       <  2:850535/93‑1 (MQ=255)

                                     tGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGGATGACAGATGCTTCAGGGCACTGGTAAccg                                                      >  1:2590689/1‑92 (MQ=255)

                                      gCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTg                                                     >  1:4723053/1‑93 (MQ=255)

                                           cgcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAgg                                                <  2:1985512/93‑1 (MQ=255)

                                            gcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGt                                               >  1:6619203/1‑93 (MQ=255)

                                            gcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGt                                               >  2:6109472/1‑93 (MQ=255)

                                            gcCAGTAGAAACGCACGAGAAACGCGCAACGGGGATTAAAGAAACGTGATTACCGAATGACAGATGCTTCAGGGCACTGGTAACCTGGGAGGt                                               >  2:4716740/1‑93 (MQ=255)

                                             ccAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGtt                                              >  2:7379169/1‑93 (MQ=255)

                                             ccAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGtt                                              <  2:179634/93‑1 (MQ=255)

                                              cAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTCGTAACCTGGTATGttt                                             >  1:5310017/1‑93 (MQ=255)

                                               aGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttc                                            >  1:9580024/1‑93 (MQ=255)

                                                gTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttct                                           >  1:1731761/1‑93 (MQ=255)

                                                 tAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttctt                                          >  1:2879271/1‑93 (MQ=255)

                                                 tAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttctt                                          >  2:354078/1‑93 (MQ=255)

                                                 tAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttctt                                          <  1:3092195/93‑1 (MQ=255)

                                                  aGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttcttc                                         <  1:1470635/93‑1 (MQ=255)

                                                  aGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttcttc                                         <  1:5571747/93‑1 (MQ=255)

                                                   gAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTcc                                        >  2:1329663/1‑93 (MQ=255)

                                                     aaCGCCCGAGAAACGTGCGTCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAt                                      >  2:9834171/1‑93 (MQ=255)

                                                     aaCGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAt                                      >  1:3453276/1‑93 (MQ=255)

                                                      aCGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATc                                     >  2:6295773/1‑93 (MQ=255)

                                                        gCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATccc                                   >  2:3707089/1‑93 (MQ=255)

                                                        gCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATccc                                   <  2:281755/93‑1 (MQ=255)

                                                        gCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATccc                                   >  2:587685/1‑93 (MQ=255)

                                                        gCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATccc                                   <  2:2676106/93‑1 (MQ=255)

                                                        gCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATccc                                   <  1:8030940/93‑1 (MQ=255)

                                                         cccGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCt                                  <  1:4390347/93‑1 (MQ=255)

                                                          ccGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTg                                 >  1:9065090/1‑93 (MQ=255)

                                                             agaAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAc                              <  1:4568365/93‑1 (MQ=255)

                                                             agaAACGTGCATCGGTGATTAACGAAAAGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAc                              >  1:3926604/1‑93 (MQ=255)

                                                              gaAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAcc                             <  2:6229899/93‑1 (MQ=255)

                                                              gaAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAcc                             >  1:2194548/1‑93 (MQ=255)

                                                                aaCGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTg                           >  1:829887/1‑93 (MQ=255)

                                                                 aCGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGa                          <  2:6781091/93‑1 (MQ=255)

                                                                   gTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAg                        <  2:6977542/93‑1 (MQ=255)

                                                                      gcgcGGTGATGAAAGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTc                     <  1:12787/90‑1 (MQ=255)

                                                                        tctgTGATTAACGAAATGTGCTTACCGTATGACAGATGCTTCAGGGCACAGGTAACCTGGTAGGTTTCTTCCATCCCTGTTCCTGAAGGTCCa                   >  2:8965433/4‑93 (MQ=255)

                                                                        tCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCa                   >  2:6588288/1‑93 (MQ=255)

                                                                         cGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCaa                  <  1:4097088/93‑1 (MQ=255)

                                                                         cGGTGATTAACAAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCaa                  <  2:7424305/93‑1 (MQ=255)

                                                                           gTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAAcc                >  1:8604514/1‑92 (MQ=255)

                                                                           gTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACg                >  2:770703/1‑93 (MQ=255)

                                                                           gTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACg                >  2:5083174/1‑93 (MQ=255)

                                                                            tGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGc               >  2:3179166/1‑93 (MQ=255)

                                                                            tGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGc               >  2:9726586/1‑93 (MQ=255)

                                                                            tGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGc               >  2:8718433/1‑93 (MQ=255)

                                                                            tGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGc               >  2:6465131/1‑93 (MQ=255)

                                                                               ttAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaa            >  2:3610271/1‑93 (MQ=255)

                                                                               ttAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaa            <  2:2386301/93‑1 (MQ=255)

                                                                               ttAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaa            >  2:9127924/1‑93 (MQ=255)

                                                                                   cGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaataat        <  2:1525381/93‑1 (MQ=255)

                                                                                    gAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATg       <  1:6450764/93‑1 (MQ=255)

                                                                                    gAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATg       >  1:7523917/1‑93 (MQ=255)

                                                                                     aaaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGa      <  2:382016/93‑1 (MQ=255)

                                                                                     aaaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGa      <  2:4386968/93‑1 (MQ=255)

                                                                                     aaaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGa      <  1:567961/93‑1 (MQ=255)

                                                                                     aaaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGa      <  2:5704988/93‑1 (MQ=255)

                                                                                      aaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAc     >  1:5274113/1‑93 (MQ=255)

                                                                                      aaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGGAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAACAATGAc     >  1:7670044/1‑93 (MQ=255)

GGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG  >  NC_000913/4519993‑4520174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGA  >  NC_000913/4519989‑4520175

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACG                                                                                               >  SRR4302540.4703644/1‑94 (MQ=60)

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACG                                                                                               >  SRR4302540.1113347/1‑94 (MQ=60)

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACG                                                                                               >  SRR4302540.4899028/1‑94 (MQ=60)

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACG                                                                                               <  SRR4302540.6555781/94‑1 (MQ=60)

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACG                                                                                               >  SRR4302540.6667843/1‑94 (MQ=60)

 ATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGT                                                                                              <  SRR4302540.4726315/94‑1 (MQ=60)

 ATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGT                                                                                              <  SRR4302540.301810/94‑1 (MQ=60)

 ATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGT                                                                                              <  SRR4302540.2475139/94‑1 (MQ=60)

 ATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGT                                                                                              >  SRR4302540.9243495/1‑94 (MQ=60)

 ATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGT                                                                                              >  SRR4302540.1429915/1‑94 (MQ=60)

  TGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTG                                                                                             <  SRR4302540.3060388/94‑1 (MQ=60)

     GGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTT                                                                                          <  SRR4302540.10039545/94‑1 (MQ=60)

     GGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTT                                                                                          <  SRR4302540.4771768/94‑1 (MQ=60)

     GGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTT                                                                                          <  SRR4302540.141500/94‑1 (MQ=60)

       CCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTAC                                                                                        <  SRR4302540.3194869/94‑1 (MQ=60)

        CTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACC                                                                                       >  SRR4302540.6112973/1‑94 (MQ=60)

        CTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACC                                                                                       <  SRR4302540.4970882/94‑1 (MQ=60)

        CTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACC                                                                                       <  SRR4302540.331814/94‑1 (MQ=60)

         TCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCG                                                                                      >  SRR4302540.8861896/1‑94 (MQ=60)

         TCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCA                                                                                      <  SRR4302540.8092155/94‑1 (MQ=60)

          CCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGT                                                                                     >  SRR4302540.1211216/1‑94 (MQ=60)

           CGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCCAGAAACGTGCATCGGTGATTAACGAAACGTGATTACCGTA                                                                                    >  SRR4302540.6889375/1‑94 (MQ=60)

            GGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTAT                                                                                   <  SRR4302540.1986349/94‑1 (MQ=60)

            GGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTAT                                                                                   >  SRR4302540.3090089/1‑94 (MQ=60)

            CGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTAT                                                                                   <  SRR4302540.2470336/94‑1 (MQ=60)

             GCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATG                                                                                  <  SRR4302540.9214652/94‑1 (MQ=60)

              GCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGA                                                                                 <  SRR4302540.6597772/94‑1 (MQ=60)

              CCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCTAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGA                                                                                 <  SRR4302540.6779923/94‑1 (MQ=60)

              CCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGA                                                                                 <  SRR4302540.1906830/94‑1 (MQ=60)

              CCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGA                                                                                 >  SRR4302540.9166852/1‑94 (MQ=60)

              CCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGA                                                                                 <  SRR4302540.874756/94‑1 (MQ=60)

               CAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGAC                                                                                >  SRR4302540.8075408/1‑94 (MQ=60)

               CAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGAC                                                                                >  SRR4302540.8485305/1‑94 (MQ=60)

                AGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACA                                                                               <  SRR4302540.4477111/94‑1 (MQ=60)

                AGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACA                                                                               >  SRR4302540.567578/1‑94 (MQ=60)

                 GCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAG                                                                              <  SRR4302540.5817240/94‑1 (MQ=60)

                 GCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAG                                                                              >  SRR4302540.3238140/1‑94 (MQ=60)

                 GCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAG                                                                              <  SRR4302540.5902567/94‑1 (MQ=60)

                  CGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGA                                                                             <  SRR4302540.7642274/94‑1 (MQ=60)

                  CGCTTCTGGACCCACAAGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGA                                                                             <  SRR4302540.9077646/94‑1 (MQ=60)

                   GCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGAT                                                                            >  SRR4302540.7375481/1‑94 (MQ=60)

                   GCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGAT                                                                            >  SRR4302540.1585681/1‑94 (MQ=60)

                   GCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGAT                                                                            <  SRR4302540.4767298/94‑1 (MQ=60)

                    CTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATG                                                                           >  SRR4302540.33673/1‑94 (MQ=60)

                    CTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATG                                                                           >  SRR4302540.10158209/1‑94 (MQ=60)

                     TTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGC                                                                          >  SRR4302540.2198580/1‑94 (MQ=60)

                      TCTGGCCCCACATGTCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCT                                                                         <  SRR4302540.3693448/94‑1 (MQ=60)

                      TCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCT                                                                         <  SRR4302540.10114465/94‑1 (MQ=60)

                       CTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTT                                                                        <  SRR4302540.6111269/94‑1 (MQ=60)

                       CTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTT                                                                        <  SRR4302540.4758252/94‑1 (MQ=60)

                         GGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCA                                                                      >  SRR4302540.3566797/1‑94 (MQ=60)

                         GGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCA                                                                      >  SRR4302540.6787413/1‑94 (MQ=60)

                          GCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAG                                                                     <  SRR4302540.7765162/94‑1 (MQ=60)

                          GCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAG                                                                     <  SRR4302540.7338728/94‑1 (MQ=60)

                          GCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAG                                                                     <  SRR4302540.3891347/94‑1 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTATCGAAACGAGCTTACCGTATGACAGATGCTTCAGG                                                                    >  SRR4302540.6537943/1‑94 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG                                                                    >  SRR4302540.2213837/1‑94 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG                                                                    <  SRR4302540.7572138/94‑1 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG                                                                    <  SRR4302540.955897/94‑1 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG                                                                    <  SRR4302540.7572139/94‑1 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG                                                                    <  SRR4302540.60884/94‑1 (MQ=60)

                           CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG                                                                    <  SRR4302540.3926370/94‑1 (MQ=60)

                            CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG                                                                   >  SRR4302540.728035/1‑94 (MQ=60)

                            CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG                                                                   >  SRR4302540.2112379/1‑94 (MQ=60)

                            CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG                                                                   >  SRR4302540.7329697/1‑94 (MQ=60)

                            CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG                                                                   >  SRR4302540.7404134/1‑94 (MQ=60)

                            CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG                                                                   >  SRR4302540.7404135/1‑94 (MQ=60)

                            CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG                                                                   >  SRR4302540.2984647/1‑94 (MQ=60)

                               ACATGGCGGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCAC                                                                <  SRR4302540.378248/94‑1 (MQ=60)

                               ACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCAC                                                                >  SRR4302540.7675711/1‑94 (MQ=60)

                                 ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTG                                                              <  SRR4302540.6834813/94‑1 (MQ=60)

                                 ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTG                                                              >  SRR4302540.7950929/1‑94 (MQ=60)

                                 ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTG                                                              >  SRR4302540.2150379/1‑94 (MQ=60)

                                 ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTG                                                              <  SRR4302540.8369800/94‑1 (MQ=60)

                                  TGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGG                                                             <  SRR4302540.616782/94‑1 (MQ=60)

                                   GGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGT                                                            <  SRR4302540.9530898/94‑1 (MQ=60)

                                   GGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGT                                                            <  SRR4302540.3222132/94‑1 (MQ=60)

                                    GCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTA                                                           <  SRR4302540.9502480/94‑1 (MQ=60)

                                     CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAA                                                          <  SRR4302540.8777007/94‑1 (MQ=60)

                                      CGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAC                                                         <  SRR4302540.6932662/94‑1 (MQ=60)

                                      CGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAC                                                         >  SRR4302540.50799/1‑94 (MQ=60)

                                      CGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAC                                                         >  SRR4302540.2356063/1‑94 (MQ=60)

                                      CGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAC                                                         <  SRR4302540.10012652/94‑1 (MQ=60)

                                       GATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACC                                                        >  SRR4302540.6535247/1‑94 (MQ=60)

                                       GATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACC                                                        >  SRR4302540.8803029/1‑94 (MQ=60)

                                       CATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACC                                                        <  SRR4302540.2565816/94‑1 (MQ=60)

                                        ATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCT                                                       >  SRR4302540.2191439/1‑94 (MQ=60)

                                        ATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCT                                                       <  SRR4302540.7297730/94‑1 (MQ=60)

                                        ATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCT                                                       >  SRR4302540.2618628/1‑94 (MQ=60)

                                        ATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGGATGACAGATGCTTCAGGGCACTGGTAACCG                                                       >  SRR4302540.2618624/1‑94 (MQ=60)

                                         TGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTG                                                      >  SRR4302540.7251678/1‑94 (MQ=60)

                                         TGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTG                                                      >  SRR4302540.4773498/1‑94 (MQ=60)

                                         TGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTG                                                      <  SRR4302540.3818208/94‑1 (MQ=60)

                                          GCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGG                                                     >  SRR4302540.1547867/1‑94 (MQ=60)

                                          GCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGG                                                     >  SRR4302540.7955619/1‑94 (MQ=60)

                                           CACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGT                                                    <  SRR4302540.1824677/94‑1 (MQ=60)

                                             CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAACCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG                                                  <  SRR4302540.73963/94‑1 (MQ=60)

                                             CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG                                                  >  SRR4302540.6357386/1‑94 (MQ=60)

                                             CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG                                                  <  SRR4302540.73962/94‑1 (MQ=60)

                                              GCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGG                                                 >  SRR4302540.2265373/1‑94 (MQ=60)

                                              GCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGG                                                 >  SRR4302540.4594699/1‑94 (MQ=60)

                                              GCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGAACTGGTAACCTGGTAGG                                                 >  SRR4302540.2750264/1‑94 (MQ=60)

                                               CGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGT                                                >  SRR4302540.6692497/1‑94 (MQ=60)

                                               CGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGT                                                >  SRR4302540.6692493/1‑94 (MQ=60)

                                               CGCCAGTAGAAACGCCAGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGT                                                <  SRR4302540.9099618/94‑1 (MQ=60)

                                                 CCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTT                                              <  SRR4302540.3452551/94‑1 (MQ=60)

                                                  CAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTC                                             >  SRR4302540.9693151/1‑94 (MQ=60)

                                                  CAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTC                                             >  SRR4302540.1403883/1‑94 (MQ=60)

                                                   AGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCT                                            <  SRR4302540.261499/94‑1 (MQ=60)

                                                   AGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCT                                            >  SRR4302540.1750450/1‑94 (MQ=60)

                                                   AGTAGAAACGCCCGAGAAACGGGCATCGGTGATTAACGAAACGGGCTTACCGTATGACAGATGTTTAAGGGCACTGGTAACCTGGTAGGTTTCT                                            >  SRR4302540.855353/1‑94 (MQ=60)

                                                    GTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTT                                           >  SRR4302540.2910587/1‑94 (MQ=60)

                                                    GTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTT                                           >  SRR4302540.5738358/1‑94 (MQ=60)

                                                     TAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTC                                          <  SRR4302540.3126110/94‑1 (MQ=60)

                                                     TAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTC                                          <  SRR4302540.9521424/94‑1 (MQ=60)

                                                     TAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTC                                          <  SRR4302540.9390440/94‑1 (MQ=60)

                                                      AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC                                         <  SRR4302540.5633097/94‑1 (MQ=60)

                                                      AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC                                         <  SRR4302540.1486710/94‑1 (MQ=60)

                                                      AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC                                         <  SRR4302540.5177717/94‑1 (MQ=60)

                                                      AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC                                         >  SRR4302540.5759201/1‑94 (MQ=60)

                                                      AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC                                         >  SRR4302540.8896482/1‑94 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       >  SRR4302540.3986550/1‑94 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       <  SRR4302540.2303116/94‑1 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       >  SRR4302540.4348269/1‑94 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       >  SRR4302540.3490848/1‑94 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       <  SRR4302540.1751551/94‑1 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       <  SRR4302540.5313181/94‑1 (MQ=60)

                                                        AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT                                       <  SRR4302540.8233137/94‑1 (MQ=60)

                                                         atctCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATC                                      <  SRR4302540.5362686/90‑1 (MQ=60)

                                                            GCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCT                                   <  SRR4302540.8124309/94‑1 (MQ=60)

                                                             CCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTG                                  >  SRR4302540.9173934/1‑94 (MQ=60)

                                                             CCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTG                                  <  SRR4302540.4437991/94‑1 (MQ=60)

                                                             CCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTG                                  >  SRR4302540.9173935/1‑94 (MQ=60)

                                                              CCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGT                                 <  SRR4302540.5456333/94‑1 (MQ=60)

                                                              CCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGT                                 >  SRR4302540.9738435/1‑94 (MQ=60)

                                                              CCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGT                                 <  SRR4302540.3991241/94‑1 (MQ=60)

                                                              CCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGT                                 <  SRR4302540.5456334/94‑1 (MQ=60)

                                                                GAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAC                               >  SRR4302540.1933269/1‑94 (MQ=60)

                                                                GAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAC                               >  SRR4302540.8738392/1‑94 (MQ=60)

                                                                GAGAAACGTGCATCGGTGATTAACGAAAAGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAC                               >  SRR4302540.3969079/1‑94 (MQ=60)

                                                                 AGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACC                              >  SRR4302540.2218250/1‑94 (MQ=60)

                                                                 AGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACC                              <  SRR4302540.4617684/94‑1 (MQ=60)

                                                                  GAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCT                             <  SRR4302540.4541386/94‑1 (MQ=60)

                                                                   AAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTG                            >  SRR4302540.838708/1‑94 (MQ=60)

                                                                     ACGTGCATTGGTGATTAACGAAACGTGCGTACCGTATTCCAGATGCTTCAGGGCACTGCTAACCTCGTAGGTTTCTTCCATCCCTGTACCTGAA                          <  SRR4302540.4318423/94‑1 (MQ=60)

                                                                     ACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAA                          <  SRR4302540.6106207/94‑1 (MQ=60)

                                                                     ACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAA                          <  SRR4302540.9087655/94‑1 (MQ=60)

                                                                     ACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAA                          <  SRR4302540.8763466/94‑1 (MQ=60)

                                                                      CGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAG                         >  SRR4302540.4282984/1‑94 (MQ=60)

                                                                      CGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAG                         <  SRR4302540.9792398/94‑1 (MQ=60)

                                                                       GTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGT                        >  SRR4302540.478942/1‑94 (MQ=60)

                                                                       GTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGG                        <  SRR4302540.9179937/94‑1 (MQ=60)

                                                                       GTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGG                        <  SRR4302540.3452289/94‑1 (MQ=60)

                                                                        TGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGC                       >  SRR4302540.5713473/1‑94 (MQ=60)

                                                                        TGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGC                       >  SRR4302540.7611724/1‑94 (MQ=60)

                                                                         GCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTC                      >  SRR4302540.4999677/1‑94 (MQ=60)

                                                                          gcgCGGTGATGAAAGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCC                     <  SRR4302540.12922/91‑1 (MQ=60)

                                                                          CATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCC                     >  SRR4302540.5537867/1‑94 (MQ=60)

                                                                          CATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCC                     <  SRR4302540.12921/94‑1 (MQ=60)

                                                                           ATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATaagcgctagatcggaagag                    >  SRR4302540.9342968/1‑75 (MQ=60)

                                                                           ATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCA                    >  SRR4302540.9190872/1‑94 (MQ=60)

                                                                           ATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCA                    >  SRR4302540.5824289/1‑94 (MQ=60)

                                                                             CGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAAC                  <  SRR4302540.1754591/94‑1 (MQ=60)

                                                                             CGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAAC                  <  SRR4302540.5104006/94‑1 (MQ=60)

                                                                             CGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAAC                  <  SRR4302540.7596014/94‑1 (MQ=60)

                                                                             CGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAAC                  <  SRR4302540.4141287/94‑1 (MQ=60)

                                                                              GGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACC                 >  SRR4302540.8704506/1‑94 (MQ=60)

                                                                               GTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGC                <  SRR4302540.231454/94‑1 (MQ=60)

                                                                                TGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCC               >  SRR4302540.1506447/1‑94 (MQ=60)

                                                                                TGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCC               >  SRR4302540.922057/1‑94 (MQ=60)

                                                                                   TTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAAT            >  SRR4302540.3636270/1‑94 (MQ=60)

                                                                                    TAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATA           <  SRR4302540.5351073/94‑1 (MQ=60)

                                                                                    TAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATA           >  SRR4302540.6471366/1‑94 (MQ=60)

                                                                                    TAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATA           <  SRR4302540.79151/94‑1 (MQ=60)

                                                                                     AACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAA          <  SRR4302540.8273340/94‑1 (MQ=60)

                                                                                     AACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAA          <  SRR4302540.3095259/94‑1 (MQ=60)

                                                                                      ACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAAT         >  SRR4302540.7837332/1‑94 (MQ=60)

                                                                                       CGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATG        >  SRR4302540.7608091/1‑94 (MQ=60)

                                                                                        GAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGA       <  SRR4302540.7183378/94‑1 (MQ=60)

                                                                                        GAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGA       >  SRR4302540.8533624/1‑94 (MQ=60)

                                                                                        GAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGA       <  SRR4302540.140126/94‑1 (MQ=60)

                                                                                        GAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGA       <  SRR4302540.6522563/94‑1 (MQ=60)

                                                                                         AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC      >  SRR4302540.5331694/1‑94 (MQ=60)

                                                                                         AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC      >  SRR4302540.2748975/1‑94 (MQ=60)

                                                                                         AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC      <  SRR4302540.574132/94‑1 (MQ=60)

                                                                                         AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC      >  SRR4302540.5331695/1‑94 (MQ=60)

                                                                                         AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGGAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAACAATGAC      >  SRR4302540.7756523/1‑94 (MQ=60)

                                                                                          AACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACC     >  SRR4302540.1873304/1‑94 (MQ=60)

                                                                                           ACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCA    >  SRR4302540.3398141/1‑94 (MQ=60)

                                                                                           ACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCA    >  SRR4302540.9013651/1‑94 (MQ=60)

                                                                                           ACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCA    <  SRR4302540.8521289/94‑1 (MQ=60)

                                                                                            CGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG   >  SRR4302540.4911842/1‑94 (MQ=60)

                                                                                            CGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG   >  SRR4302540.4911845/1‑94 (MQ=60)

                                                                                            CGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG   <  SRR4302540.1432469/94‑1 (MQ=60)

                                                                                            CGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG   <  SRR4302540.7818176/94‑1 (MQ=60)

                                                                                            CATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG   >  SRR4302540.3993623/1‑94 (MQ=60)

                                                                                             GTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGA  >  SRR4302540.3939895/1‑94 (MQ=60)

                                                                                             GTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGA  <  SRR4302540.5709993/94‑1 (MQ=60)

                                                                                             GTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGA  >  SRR4302540.7516069/1‑94 (MQ=60)

                                                                                             GTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGA  >  SRR4302540.779054/1‑94 (MQ=60)

GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGA  >  NC_000913/4519989‑4520175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`