Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,520,082 |
A→G |
H527H (CAT→CAC) |
yjhG ← |
putative dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,520,082 | 0 | A | G | 100.0%
| 657.7
/ NA
| 203 | H527H (CAT→CAC) | yjhG | putative dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (115/88); total (115/88) |
Only 100 of 204 total aligned reads displayed.
GCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC > NC_000913/4519995‑4520171
|
cTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTAc > 2:2915339/1‑93 (MQ=255)
cTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACACCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTag > 2:581877/1‑92 (MQ=255)
ccGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCg < 2:6235875/93‑1 (MQ=255)
cGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGt > 1:3429696/1‑93 (MQ=255)
ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTa > 1:616668/1‑93 (MQ=255)
ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTa > 2:2621224/1‑93 (MQ=255)
ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATg > 2:6056484/1‑93 (MQ=255)
ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATg > 1:4051036/1‑93 (MQ=255)
ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATg > 2:1016981/1‑93 (MQ=255)
cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGa < 2:6012232/93‑1 (MQ=255)
cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGa > 2:5723300/1‑93 (MQ=255)
aGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGAc < 1:1895583/93‑1 (MQ=255)
aGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGAc > 1:486327/1‑93 (MQ=255)
gcgcTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACa > 1:1640889/1‑93 (MQ=255)
cgcTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAg > 2:3233855/1‑93 (MQ=255)
cTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGAt > 2:3621964/1‑93 (MQ=255)
ttCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATg > 1:3004930/1‑93 (MQ=255)
tgtccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCtt < 2:4606536/90‑1 (MQ=255)
ggCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTc < 1:2097855/93‑1 (MQ=255)
ggCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTc < 1:5642473/93‑1 (MQ=255)
gCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCa < 2:1171842/93‑1 (MQ=255)
cccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAgg < 2:3439651/93‑1 (MQ=255)
ccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg > 1:229302/1‑93 (MQ=255)
ccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg < 2:673670/93‑1 (MQ=255)
ccACATGGCAGATGCACGCTCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAggg < 1:3243211/93‑1 (MQ=255)
cacaTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGc < 1:1079970/93‑1 (MQ=255)
acaTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCa > 1:1845594/1‑93 (MQ=255)
tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg < 2:2469496/93‑1 (MQ=255)
tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg > 2:4348283/1‑93 (MQ=255)
tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTg < 1:5390676/93‑1 (MQ=255)
ccGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTa < 2:5532126/93‑1 (MQ=255)
cGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTaa < 2:5584680/93‑1 (MQ=255)
cGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTaa > 2:4208051/1‑93 (MQ=255)
gATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAc > 2:3081873/1‑93 (MQ=255)
gATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAc > 1:962570/1‑93 (MQ=255)
tGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCt > 2:2286295/1‑93 (MQ=255)
gCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTg < 1:4136074/93‑1 (MQ=255)
gCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTg < 1:2562660/93‑1 (MQ=255)
gCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTg < 2:3557168/93‑1 (MQ=255)
gCACGCGCAAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTg < 2:1227874/93‑1 (MQ=255)
aCGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGt > 2:4758077/1‑93 (MQ=255)
aCGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGt > 2:4863206/1‑93 (MQ=255)
aCGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGt < 1:2068586/93‑1 (MQ=255)
cgcgCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTa < 1:6033460/93‑1 (MQ=255)
cgcgCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTa < 1:3486791/93‑1 (MQ=255)
gcgcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAg > 1:50494/1‑93 (MQ=255)
cgcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAgg > 1:6298003/1‑93 (MQ=255)
gcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGt > 2:4727417/1‑93 (MQ=255)
gcCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGt < 1:1112425/93‑1 (MQ=255)
ccAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGtt > 1:1687707/1‑93 (MQ=255)
cAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGttt > 2:4056391/1‑93 (MQ=255)
aGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttc > 2:843545/1‑93 (MQ=255)
aGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttc < 2:250017/93‑1 (MQ=255)
tAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttctt > 1:2052368/1‑93 (MQ=255)
tAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTttctt < 2:2734141/93‑1 (MQ=255)
gAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTcc > 2:6169342/1‑93 (MQ=255)
gAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTcc > 1:3329592/1‑93 (MQ=255)
gAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTcc > 1:4721075/1‑93 (MQ=255)
aaaCGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCa < 1:571122/93‑1 (MQ=255)
aaCGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAt > 2:3310397/1‑93 (MQ=255)
aCGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATc > 2:5465298/1‑93 (MQ=255)
cGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATcc > 2:1655755/1‑93 (MQ=255)
cGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATcc < 1:5861597/93‑1 (MQ=255)
gCCCGAGAAACGTGCATCAGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATccc < 1:688185/93‑1 (MQ=255)
cGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGt > 2:1311776/1‑93 (MQ=255)
cGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGt > 2:3951653/1‑93 (MQ=255)
cGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGt < 1:5382054/93‑1 (MQ=255)
gagaAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTa > 1:93599/1‑93 (MQ=255)
gagaAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTa > 2:2113824/1‑93 (MQ=255)
agaAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTAc > 2:5105813/1‑93 (MQ=255)
aaCGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTg > 1:2189323/1‑93 (MQ=255)
aCGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGa > 1:1223100/1‑93 (MQ=255)
cGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGaa < 2:1697910/93‑1 (MQ=255)
cGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGaa < 2:5663865/93‑1 (MQ=255)
gTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAg > 2:4156600/1‑93 (MQ=255)
gTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAg < 2:3754053/93‑1 (MQ=255)
tGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAgg < 2:449283/93‑1 (MQ=255)
tGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAgg > 1:3128083/1‑93 (MQ=255)
gCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGt > 1:159520/1‑93 (MQ=255)
aTCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTcc > 1:2802684/1‑93 (MQ=255)
tCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGAACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCa > 2:5076592/1‑93 (MQ=255)
cGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCaa < 1:5482485/93‑1 (MQ=255)
cGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCaa < 2:1911735/93‑1 (MQ=255)
cGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCaa < 2:1547601/93‑1 (MQ=255)
gTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACg > 2:1468586/1‑93 (MQ=255)
tGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGc < 2:1056405/93‑1 (MQ=255)
tGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGc > 2:4656028/1‑93 (MQ=255)
gATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGcc > 2:5692012/1‑93 (MQ=255)
aTTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCa > 1:3838485/1‑93 (MQ=255)
ttAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaa < 1:4411986/93‑1 (MQ=255)
ttAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaa < 2:3717020/93‑1 (MQ=255)
ttAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaa < 2:1567843/93‑1 (MQ=255)
aaCGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaata > 2:5864804/1‑93 (MQ=255)
aCGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaataa > 2:5548651/1‑93 (MQ=255)
aCGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaataa < 1:3234060/93‑1 (MQ=255)
aCGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCaataa > 2:6248994/1‑93 (MQ=255)
gAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATg > 2:2217675/1‑93 (MQ=255)
aaaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGa > 1:3471044/1‑93 (MQ=255)
aaaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGGAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGa > 2:4471452/1‑93 (MQ=255)
aaCGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAc > 1:4887160/1‑93 (MQ=255)
|
GCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC > NC_000913/4519995‑4520171
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG > NC_000913/4519989‑4520174
|
CATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACG < SRR4302533.2097976/94‑1 (MQ=60)
ATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCCTCGGTGATTAACGAAACGT > SRR4302533.6099673/1‑94 (MQ=60)
GCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTA < SRR4302533.975814/94‑1 (MQ=60)
CTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACC > SRR4302533.3484704/1‑94 (MQ=60)
TCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCG < SRR4302533.2118027/94‑1 (MQ=60)
CCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGT > SRR4302533.3450884/1‑94 (MQ=60)
CGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTA > SRR4302533.620287/1‑94 (MQ=60)
GCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATG > SRR4302533.1909908/1‑94 (MQ=60)
GCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATG > SRR4302533.4075712/1‑94 (MQ=60)
CCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGA < SRR4302533.953441/94‑1 (MQ=60)
CAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGAC > SRR4302533.489239/1‑94 (MQ=60)
AGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACA > SRR4302533.1650830/1‑94 (MQ=60)
AGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACA > SRR4302533.2216146/1‑94 (MQ=60)
AGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACA < SRR4302533.1907153/94‑1 (MQ=60)
CGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGA < SRR4302533.4928850/94‑1 (MQ=60)
GCTTCGGGCCCCACAGGACCGATGCACGCGCCTGTATAATCGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGAT < SRR4302533.6310752/94‑1 (MQ=60)
CTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATG > SRR4302533.2431402/1‑94 (MQ=60)
CTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATG > SRR4302533.3023310/1‑94 (MQ=60)
CTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTT > SRR4302533.1904123/1‑94 (MQ=60)
CTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTT > SRR4302533.5714794/1‑94 (MQ=60)
CTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTT < SRR4302533.3870614/94‑1 (MQ=60)
CTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTT > SRR4302533.3220603/1‑94 (MQ=60)
GGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCA < SRR4302533.5676577/94‑1 (MQ=60)
GGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCA < SRR4302533.2110770/94‑1 (MQ=60)
GGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCA < SRR4302533.5490026/94‑1 (MQ=60)
GCCCCCGATGGCGGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAG < SRR4302533.6076947/94‑1 (MQ=60)
CCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGG > SRR4302533.4858363/1‑94 (MQ=60)
CCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGG > SRR4302533.230725/1‑94 (MQ=60)
CCACATGGCAGATGCACGCTCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGC < SRR4302533.3263198/94‑1 (MQ=60)
CACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCA < SRR4302533.1086334/94‑1 (MQ=60)
CACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCA > SRR4302533.1856847/1‑94 (MQ=60)
ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTG < SRR4302533.287800/94‑1 (MQ=60)
ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTG < SRR4302533.2071811/94‑1 (MQ=60)
ATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTG > SRR4302533.4247028/1‑94 (MQ=60)
TGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGG < SRR4302533.5423068/94‑1 (MQ=60)
GGCCGATGCACGCGCCAGTAGAAACGCCAGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTGCCGTATGACAGATGCTTCAGGGCACTGGT < SRR4302533.5975558/94‑1 (MQ=60)
CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAA > SRR4302533.4908089/1‑94 (MQ=60)
CGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAAC > SRR4302533.968227/1‑94 (MQ=60)
TGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTG < SRR4302533.1199447/94‑1 (MQ=60)
GCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGG < SRR4302533.2578437/94‑1 (MQ=60)
GCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGG < SRR4302533.4161176/94‑1 (MQ=60)
ACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTA < SRR4302533.2081329/94‑1 (MQ=60)
CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG > SRR4302533.50839/1‑94 (MQ=60)
CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG < SRR4302533.5633780/94‑1 (MQ=60)
CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG < SRR4302533.6070022/94‑1 (MQ=60)
CGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAG < SRR4302533.3508293/94‑1 (MQ=60)
GCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGG > SRR4302533.6335593/1‑94 (MQ=60)
CGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGT < SRR4302533.1303600/94‑1 (MQ=60)
GCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTT < SRR4302533.3717652/94‑1 (MQ=60)
GCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTT > SRR4302533.1697935/1‑94 (MQ=60)
GCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTT < SRR4302533.1119025/94‑1 (MQ=60)
GTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTT > SRR4302533.2065032/1‑94 (MQ=60)
AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC > SRR4302533.3350172/1‑94 (MQ=60)
AGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCC > SRR4302533.4749699/1‑94 (MQ=60)
AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT < SRR4302533.574495/94‑1 (MQ=60)
AAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCAT < SRR4302533.2104532/94‑1 (MQ=60)
CGCCCGGGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCC < SRR4302533.3446927/94‑1 (MQ=60)
CGCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCC < SRR4302533.5897037/94‑1 (MQ=60)
GCCCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCT < SRR4302533.4650641/94‑1 (MQ=60)
GCCCGAGAAACGTGCATCAGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCT < SRR4302533.692254/94‑1 (MQ=60)
CCGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGT > SRR4302533.412213/1‑94 (MQ=60)
CGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTA < SRR4302533.5414389/94‑1 (MQ=60)
CGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTA > SRR4302533.1607005/1‑94 (MQ=60)
CGAGAAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTA > SRR4302533.94189/1‑94 (MQ=60)
AAACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTG > SRR4302533.2202811/1‑94 (MQ=60)
AACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGA > SRR4302533.1230435/1‑94 (MQ=60)
ACGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAA < SRR4302533.825347/94‑1 (MQ=60)
CGTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATGCCTGTACCTGAAG > SRR4302533.1736380/1‑94 (MQ=60)
GTGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGG > SRR4302533.3147314/1‑94 (MQ=60)
TGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGT > SRR4302533.679985/1‑94 (MQ=60)
TGCATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGT > SRR4302533.160539/1‑94 (MQ=60)
CATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCC > SRR4302533.2819933/1‑94 (MQ=60)
ATCGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCA > SRR4302533.5419541/1‑94 (MQ=60)
CGGTGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAAC < SRR4302533.5515535/94‑1 (MQ=60)
TGATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCC > SRR4302533.1680440/1‑94 (MQ=60)
GATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCA > SRR4302533.3861936/1‑94 (MQ=60)
GATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCA > SRR4302533.3256400/1‑94 (MQ=60)
ATTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAA > SRR4302533.3275618/1‑94 (MQ=60)
TTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAAT < SRR4302533.1092098/94‑1 (MQ=60)
TTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAAT < SRR4302533.5346965/94‑1 (MQ=60)
TTAACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAAT < SRR4302533.4438630/94‑1 (MQ=60)
AACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAA < SRR4302533.4146916/94‑1 (MQ=60)
ACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAAT < SRR4302533.577303/94‑1 (MQ=60)
ACGAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAAT < SRR4302533.3253986/94‑1 (MQ=60)
GAAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGA > SRR4302533.3492470/1‑94 (MQ=60)
AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC > SRR4302533.2579627/1‑94 (MQ=60)
AAACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGAC > SRR4302533.4916771/1‑94 (MQ=60)
AACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACC < SRR4302533.3102804/94‑1 (MQ=60)
AACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACC < SRR4302533.349311/94‑1 (MQ=60)
ACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCA < SRR4302533.873908/94‑1 (MQ=60)
ACGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCA > SRR4302533.3348464/1‑94 (MQ=60)
CGTGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG < SRR4302533.5260727/94‑1 (MQ=60)
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GATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAG > NC_000913/4519989‑4520174
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
