Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,551,614 |
T→C |
L382P (CTG→CCG) |
uxuB → |
D‑mannonate oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,551,614 | 0 | T | C | 99.6%
| 856.0
/ ‑5.4
| 272 | L382P (CTG→CCG) | uxuB | D‑mannonate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (143/128); total (143/129) |
| Fisher's exact test for biased strand distribution p-value = 4.74e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 |
Only 100 of 287 total aligned reads displayed.
CGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAG > NC_000913/4551524‑4551702
|
cGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTccgc > 2:8868902/1‑93 (MQ=255)
ctgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTccgctg > 2:4297088/1‑93 (MQ=255)
ctgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTccgctg > 2:5938784/1‑93 (MQ=255)
tgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTgg > 2:3739280/1‑93 (MQ=255)
tgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTgg < 2:3952749/93‑1 (MQ=255)
gctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGa < 2:6438303/93‑1 (MQ=255)
gctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCAATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGa < 2:6542672/93‑1 (MQ=255)
tgATCGAGTGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGAcc < 1:1620772/93‑1 (MQ=255)
tgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGAcc < 1:1470728/93‑1 (MQ=255)
tgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGAcc < 1:9021119/93‑1 (MQ=255)
tgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGAcc < 1:5083424/93‑1 (MQ=255)
gATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGAccc < 1:9347203/93‑1 (MQ=255)
aTCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCg < 1:9276282/93‑1 (MQ=255)
gAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTg > 2:1878340/1‑93 (MQ=255)
aGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGc > 1:6316055/1‑93 (MQ=255)
gCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCg > 1:6247944/1‑93 (MQ=255)
gCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCg > 2:4620336/1‑93 (MQ=255)
cGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGt > 2:5902288/1‑93 (MQ=255)
cGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGt > 2:1499621/1‑93 (MQ=255)
gTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTc < 2:3611372/93‑1 (MQ=255)
gTTTCAGCAACCCATCTCTGCGTCCCCGTCCATAGCAGATTGCGATGGAAGGCAGCCAGAGGTTACCGCAGCGACCGCTGGACCCGGTGCGTc < 1:8948816/93‑1 (MQ=255)
tttCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCt > 1:7486760/1‑93 (MQ=255)
tttCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCt < 1:1552225/93‑1 (MQ=255)
tttCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCt > 2:5205817/1‑93 (MQ=255)
ttCAGCAACCCGTCTCTGCGTCACCGTCCCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTg < 2:834020/93‑1 (MQ=255)
cAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCa < 2:413810/93‑1 (MQ=255)
gCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCATCGTCCGCTTGAACCGGAGCGTCTGCAcc > 2:5610917/1‑93 (MQ=37)
cAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCt > 2:1343901/1‑93 (MQ=255)
cAACCCGTCTCTGCGTCACCGTACCTGGCAGATGGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCt < 2:232471/93‑1 (MQ=255)
aCCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCCCCTGc > 1:1875220/1‑93 (MQ=255)
ccGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaa > 2:1944638/1‑93 (MQ=255)
ccGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaa < 1:6613033/93‑1 (MQ=255)
ccGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaa > 2:7868839/1‑93 (MQ=255)
ccGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaa > 1:9861803/1‑93 (MQ=255)
gTCTCTGCGTCCCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaaaa < 2:7552369/93‑1 (MQ=255)
gTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaaaa > 1:4258589/1‑93 (MQ=255)
gTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaaaa > 1:3301552/1‑93 (MQ=255)
tctcTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAc < 2:9914312/93‑1 (MQ=255)
tctcTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAc < 2:860387/93‑1 (MQ=255)
ctctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcg < 2:6006806/93‑1 (MQ=255)
ctcgGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcg < 2:2157404/93‑1 (MQ=255)
tctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcgg > 1:1155368/1‑93 (MQ=255)
tctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcgg > 1:4349156/1‑93 (MQ=255)
tctGCGTCACCGTACATGGCAGATTGCGATGGACGGCAGCCAGCAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcgg < 2:8987692/93‑1 (MQ=39)
ctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCTCTGGACCCGGTGCGTCTGCACCTGCAAAAcggc > 1:9715383/1‑93 (MQ=255)
ctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggc < 1:2132218/93‑1 (MQ=255)
tGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcg > 1:9458217/1‑93 (MQ=255)
gCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcgg < 2:6229862/93‑1 (MQ=255)
gCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcgg > 1:6696899/1‑93 (MQ=255)
gTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCa > 2:7215639/1‑93 (MQ=255)
gTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCa > 2:258366/1‑93 (MQ=255)
tCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAg > 1:4578138/1‑93 (MQ=255)
tCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTACGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAg > 1:4562640/1‑93 (MQ=255)
cACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGc > 2:976379/1‑93 (MQ=255)
aCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCt > 2:164883/1‑93 (MQ=255)
aCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCt > 1:1397863/1‑93 (MQ=255)
aCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGAGTCTGCACCTGCAAAACGGCGGCAGCt > 2:3845655/1‑93 (MQ=255)
tACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCg > 1:8080952/1‑93 (MQ=255)
tACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCg < 1:5763246/93‑1 (MQ=255)
aCCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGt > 1:6752656/1‑93 (MQ=255)
aCCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGt < 2:3008717/93‑1 (MQ=255)
cTGGCAGATTGCGACGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGAGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCa > 2:7023979/1‑93 (MQ=255)
tGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCAc > 2:5086395/1‑93 (MQ=255)
tGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCAc > 2:8661282/1‑93 (MQ=255)
tGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCAc < 1:6869758/93‑1 (MQ=255)
gCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCCCCt > 1:2000185/1‑93 (MQ=255)
gCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCt < 1:2748140/93‑1 (MQ=255)
gCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCt < 2:3881736/93‑1 (MQ=255)
gCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCt < 1:4891750/93‑1 (MQ=255)
gCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCt > 2:2530883/1‑93 (MQ=255)
aGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTgg < 1:1021662/93‑1 (MQ=255)
aGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTgg > 2:7146143/1‑93 (MQ=255)
gATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgc < 1:5177570/93‑1 (MQ=255)
gATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgc > 1:599330/1‑93 (MQ=255)
aTTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGGCACCTGgcg > 2:4953542/1‑93 (MQ=255)
ttGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgcgc < 1:9229558/93‑1 (MQ=255)
gCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTg < 1:2642300/93‑1 (MQ=255)
gCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTg < 1:8449102/93‑1 (MQ=255)
gATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTggg > 1:333908/1‑93 (MQ=255)
tGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCg > 1:182069/1‑93 (MQ=255)
tGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCg < 2:128040/93‑1 (MQ=255)
ggCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGtggct < 2:2882583/93‑1 (MQ=255)
gCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGtggctg < 2:4587019/93‑1 (MQ=255)
ccAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGgctggctg > 2:732006/1‑93 (MQ=255)
cAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGctggctgg < 2:7287227/93‑1 (MQ=255)
cAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCCGGCGCTGGGCGCGGctggctgg > 2:2276255/1‑93 (MQ=255)
aGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGa < 2:4762762/93‑1 (MQ=255)
gAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAt > 1:2385277/1‑93 (MQ=255)
gAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAt < 1:5182040/93‑1 (MQ=255)
gTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCg < 2:66671/93‑1 (MQ=255)
ttACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGt > 1:5525454/1‑93 (MQ=255)
ccGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTac < 1:3802455/93‑1 (MQ=255)
cGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTaca < 2:5397124/93‑1 (MQ=255)
cAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGGTGCGTTACAcc > 2:7411605/1‑93 (MQ=255)
cAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACAcc < 1:7635157/93‑1 (MQ=255)
gCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCGCCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCa < 1:10010777/93‑1 (MQ=255)
gCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCa < 2:3160688/93‑1 (MQ=255)
gCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCa < 2:9594291/93‑1 (MQ=255)
cGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAg < 2:9419593/93‑1 (MQ=255)
cGTCCGCTGAACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAg < 2:4799245/93‑1 (MQ=255)
|
CGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAG > NC_000913/4551524‑4551702
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGT > NC_000913/4551521‑4551707
|
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302540.9204447/94‑1 (MQ=60)
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302540.6632152/94‑1 (MQ=60)
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302540.1538028/94‑1 (MQ=60)
CGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCT > SRR4302540.9356265/1‑94 (MQ=60)
GCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTG > SRR4302540.371674/1‑94 (MQ=60)
CTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCCGAAGTTACCGCAGCGTCCGCTGG > SRR4302540.4785479/1‑94 (MQ=60)
CTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGG > SRR4302540.4441186/1‑94 (MQ=60)
CTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGG > SRR4302540.7640273/1‑94 (MQ=60)
TGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGA > SRR4302540.1559468/1‑94 (MQ=60)
CTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACC > SRR4302540.5197785/1‑94 (MQ=60)
CTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTCGACC > SRR4302540.1076262/1‑94 (MQ=60)
TGATCGAGTGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC < SRR4302540.1638538/94‑1 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC > SRR4302540.8345104/1‑94 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC < SRR4302540.5138384/94‑1 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC < SRR4302540.1486806/94‑1 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC > SRR4302540.6199724/1‑94 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC < SRR4302540.9129366/94‑1 (MQ=60)
GATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCG > SRR4302540.5072094/1‑94 (MQ=60)
GATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCG < SRR4302540.9458549/94‑1 (MQ=60)
gccgcGCGTTTCAGCAACCCGTCTCTGCGTCCCCGTCCCTGGCAGATTGCGATGGCCGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG < SRR4302540.9482356/89‑1 (MQ=60)
ATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG > SRR4302540.244318/1‑94 (MQ=60)
ATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG < SRR4302540.9387184/94‑1 (MQ=60)
ATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG < SRR4302540.8166275/94‑1 (MQ=60)
ATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG > SRR4302540.9478978/1‑94 (MQ=60)
ATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG < SRR4302540.9956338/94‑1 (MQ=60)
TCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGT < SRR4302540.6842916/94‑1 (MQ=60)
TCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGT < SRR4302540.4404476/94‑1 (MQ=60)
CGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTG < SRR4302540.665590/94‑1 (MQ=60)
GAGGGGTTCAGCAACCCGTCTCTGCGTCCCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGC < SRR4302540.3159993/94‑1 (MQ=60)
GAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGC < SRR4302540.4304709/94‑1 (MQ=60)
GAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGC > SRR4302540.6386388/1‑94 (MQ=60)
GAGCGGTTCACCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGC < SRR4302540.924196/94‑1 (MQ=60)
AGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCG > SRR4302540.6317476/1‑94 (MQ=60)
CGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTC > SRR4302540.9193171/1‑94 (MQ=60)
CGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTC > SRR4302540.5714502/1‑94 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACTGCAGCCAGAAGGTACCGCAGCGTCCGCTGGACCCGGTGCGTCT > SRR4302540.2316352/1‑94 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCT < SRR4302540.6096363/94‑1 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCT < SRR4302540.4933966/94‑1 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCT > SRR4302540.7570334/1‑94 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCT > SRR4302540.9400572/1‑94 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCG > SRR4302540.6697320/1‑94 (MQ=60)
TTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTG < SRR4302540.1569321/94‑1 (MQ=60)
TCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCA > SRR4302540.3897641/1‑94 (MQ=60)
AGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACC > SRR4302540.2223281/1‑94 (MQ=60)
AGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACC > SRR4302540.9381863/1‑94 (MQ=60)
AACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCCCCTGC > SRR4302540.1895761/1‑94 (MQ=60)
CCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAA > SRR4302540.9977020/1‑94 (MQ=60)
CCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAA < SRR4302540.6686259/94‑1 (MQ=60)
CGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAA > SRR4302540.3337693/1‑94 (MQ=60)
CGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAA > SRR4302540.6776825/1‑94 (MQ=60)
CGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAA > SRR4302540.4304916/1‑94 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAC > SRR4302540.3355247/1‑94 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAC > SRR4302540.1036671/1‑94 (MQ=60)
GTCTCTGCGTCACCGTAACTGGCAGACTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCTCCTGCAAAAC < SRR4302540.9076879/94‑1 (MQ=60)
CTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGG > SRR4302540.1267194/1‑94 (MQ=60)
CTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGG > SRR4302540.252500/1‑94 (MQ=60)
CTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGG > SRR4302540.1167395/1‑94 (MQ=60)
CTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGG > SRR4302540.4396471/1‑94 (MQ=60)
CTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGG > SRR4302540.3189913/1‑94 (MQ=60)
TCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCTCTGGACCCGGTGCGTCTGCACCTGCAAAACGGC > SRR4302540.9829538/1‑94 (MQ=60)
TCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGC < SRR4302540.1974252/94‑1 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG > SRR4302540.5235414/1‑94 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG > SRR4302540.9570450/1‑94 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG < SRR4302540.1789363/94‑1 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG < SRR4302540.2155107/94‑1 (MQ=60)
TGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGG > SRR4302540.6770822/1‑94 (MQ=60)
GTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAG > SRR4302540.4627508/1‑94 (MQ=60)
GTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAG > SRR4302540.4611930/1‑94 (MQ=60)
GTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTACGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAG > SRR4302540.4611927/1‑94 (MQ=60)
GCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGC < SRR4302540.9523632/94‑1 (MQ=60)
CACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCT > SRR4302540.1412875/1‑94 (MQ=60)
CACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCT > SRR4302540.6025729/1‑94 (MQ=60)
ACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTG > SRR4302540.2142777/1‑94 (MQ=60)
CGTACCTGGCAGATTGCGATGGACGGCAGCCAGACGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGC < SRR4302540.1469333/94‑1 (MQ=60)
CGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGC > SRR4302540.2089250/1‑94 (MQ=60)
CGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGC > SRR4302540.2690186/1‑94 (MQ=60)
CGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGC > SRR4302540.1806925/1‑94 (MQ=60)
GTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCG > SRR4302540.8174747/1‑94 (MQ=60)
TACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGT > SRR4302540.6827270/1‑94 (MQ=60)
TACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGT < SRR4302540.5826881/94‑1 (MQ=60)
CCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCA > SRR4302540.6919453/1‑94 (MQ=60)
CCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGGCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCC > SRR4302540.8131352/1‑94 (MQ=60)
TGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACC < SRR4302540.6945912/94‑1 (MQ=60)
GGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCCCCT > SRR4302540.2021844/1‑94 (MQ=60)
GCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTG < SRR4302540.2777832/94‑1 (MQ=60)
GCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTG < SRR4302540.4944352/94‑1 (MQ=60)
CAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGG < SRR4302540.6812666/94‑1 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC > SRR4302540.605757/1‑94 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC < SRR4302540.1032029/94‑1 (MQ=60)
GATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCG < SRR4302540.5233921/94‑1 (MQ=60)
TTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCT < SRR4302540.9340197/94‑1 (MQ=60)
TTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCT < SRR4302540.7601082/94‑1 (MQ=60)
TTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCT < SRR4302540.2916207/94‑1 (MQ=60)
GCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGG < SRR4302540.2670956/94‑1 (MQ=60)
GCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGG < SRR4302540.8547191/94‑1 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302540.6358978/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302540.4342047/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302540.6358977/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302540.337266/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302540.3347200/1‑94 (MQ=60)
ATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCG > SRR4302540.8938601/1‑94 (MQ=60)
ATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCG > SRR4302540.183884/1‑94 (MQ=60)
TGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGT < SRR4302540.5207515/94‑1 (MQ=60)
GGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTG > SRR4302540.1306921/1‑94 (MQ=60)
GCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGG > SRR4302540.1577441/1‑94 (MQ=60)
GCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGG < SRR4302540.1883109/94‑1 (MQ=60)
AGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCT < SRR4302540.1540995/94‑1 (MQ=60)
AGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCT > SRR4302540.835296/1‑94 (MQ=60)
GCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTG > SRR4302540.6400458/1‑94 (MQ=60)
GCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTG > SRR4302540.5328935/1‑94 (MQ=60)
CAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCCCCTGGCGCTGGGCGTGGCTGGCTGGT > SRR4302540.9686298/1‑94 (MQ=60)
CAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGA > SRR4302540.1577732/1‑94 (MQ=60)
CAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGA > SRR4302540.5358297/1‑94 (MQ=60)
CAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGA < SRR4302540.4363883/94‑1 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAT > SRR4302540.9616948/1‑94 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAT > SRR4302540.2410976/1‑94 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAT > SRR4302540.8776596/1‑94 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAG > SRR4302540.9431890/1‑94 (MQ=60)
GAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATG > SRR4302540.10161047/1‑94 (MQ=60)
GAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATG < SRR4302540.5238449/94‑1 (MQ=60)
AAGTTCCCGCAGCGGCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGAGTGGCTGGCTGGATGC < SRR4302540.2752016/94‑1 (MQ=60)
AAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGC < SRR4302540.7445299/94‑1 (MQ=60)
GTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGT > SRR4302540.148504/1‑94 (MQ=60)
GTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGT > SRR4302540.5586301/1‑94 (MQ=60)
TTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTT < SRR4302540.7350211/94‑1 (MQ=60)
TACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTA < SRR4302540.4622240/94‑1 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA > SRR4302540.9962983/1‑94 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA < SRR4302540.3843876/94‑1 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA < SRR4302540.1922650/94‑1 (MQ=60)
CGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACAC < SRR4302540.5718491/94‑1 (MQ=60)
GCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACC < SRR4302540.4953770/94‑1 (MQ=60)
CAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCC < SRR4302540.7721052/94‑1 (MQ=60)
CAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCC > SRR4302540.586561/1‑94 (MQ=60)
GCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCGCCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAG < SRR4302540.10127342/94‑1 (MQ=60)
GTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGgtgcggtcaacccagcg > SRR4302540.5975623/1‑77 (MQ=60)
GTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGG > SRR4302540.5975624/1‑94 (MQ=60)
TCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGC > SRR4302540.1720877/1‑94 (MQ=60)
TCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGC < SRR4302540.8838094/94‑1 (MQ=60)
TCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGC < SRR4302540.7916143/94‑1 (MQ=60)
TCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGC < SRR4302540.1488593/94‑1 (MQ=60)
TCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGC < SRR4302540.260876/94‑1 (MQ=60)
CCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCG > SRR4302540.1291510/1‑94 (MQ=60)
CGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGT < SRR4302540.8579309/94‑1 (MQ=60)
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CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGT > NC_000913/4551521‑4551707
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
