Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,551,614 |
T→C |
L382P (CTG→CCG) |
uxuB → |
D‑mannonate oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,551,614 | 0 | T | C | 100.0%
| 756.9
/ NA
| 237 | L382P (CTG→CCG) | uxuB | D‑mannonate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/108); total (129/108) |
Only 100 of 252 total aligned reads displayed.
CGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGG > NC_000913/4551524‑4551703
|
cGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTccgc < 2:2255186/93‑1 (MQ=255)
gctgctGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTccgct < 2:3139637/93‑1 (MQ=255)
ctgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTccgctg > 1:1237695/1‑93 (MQ=255)
tgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTCCCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTgg < 1:56245/93‑1 (MQ=255)
tgctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTgg < 2:5056670/93‑1 (MQ=255)
gctgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGa > 2:1037344/1‑93 (MQ=255)
tgATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGAcc > 2:2972905/1‑93 (MQ=255)
gATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTCGCAGATTGCGATGGACGGCAGCCAGCAGTTACCGCAGCGTCCGCTGGAccc > 1:4442818/1‑93 (MQ=255)
aTCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCg < 1:1624575/93‑1 (MQ=255)
tCGAGCGTTTCAGCATCCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCgg < 2:2617276/93‑1 (MQ=255)
gAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTg > 1:3771426/1‑93 (MQ=255)
aGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGc > 1:451133/1‑93 (MQ=255)
aGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGc > 2:4003391/1‑93 (MQ=255)
gTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTc < 2:5200168/93‑1 (MQ=255)
gTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTc < 2:1229009/93‑1 (MQ=255)
tttCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCt > 1:4115152/1‑93 (MQ=255)
ttCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGCTACCGCAGCGTCCGCTGGACCCGGTGCGTCTg > 1:1788073/1‑93 (MQ=255)
tCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGc > 1:676435/1‑93 (MQ=255)
tCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGc > 2:2151448/1‑93 (MQ=255)
tCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGc < 1:1845008/93‑1 (MQ=255)
cAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCa < 1:1393781/93‑1 (MQ=255)
cAGCAACCCGTCTCTGCGTCACAGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCa < 1:1874091/93‑1 (MQ=255)
gCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCAcc > 1:6297394/1‑93 (MQ=255)
cAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCt < 1:1386005/93‑1 (MQ=255)
cAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGAAGCGTCAGCTGGACCCGGTGCGTCTGCACCt > 1:1828982/1‑93 (MQ=255)
aaCCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTg > 2:5657210/1‑93 (MQ=255)
cccGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCa > 1:227176/1‑93 (MQ=255)
cGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGCGCGTCTGCACCTGCaaa > 1:5717081/1‑93 (MQ=255)
gTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaaaa < 2:2934249/93‑1 (MQ=255)
gTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaaaa > 2:622554/1‑93 (MQ=255)
gTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCaaaa < 1:4158043/93‑1 (MQ=255)
tctcTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAc > 1:2615702/1‑93 (MQ=255)
ctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggc < 2:403170/93‑1 (MQ=255)
ctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggc > 2:3171370/1‑93 (MQ=255)
ctGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGCTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggc < 1:3305114/93‑1 (MQ=255)
tGCGTCGCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcg < 2:2318047/93‑1 (MQ=255)
tGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcg > 2:333646/1‑93 (MQ=255)
tGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcg > 1:4875888/1‑93 (MQ=255)
gCGTCCCCGTACCTGGCAGATTGCGATTGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAcggcgg < 1:5748787/93‑1 (MQ=255)
cGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACggcggc < 2:4160267/93‑1 (MQ=255)
gTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCa > 2:4784838/1‑93 (MQ=255)
gTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCa < 1:4768434/93‑1 (MQ=255)
tcgccGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTACACCTGCAAAACGGCGGCAg < 2:2537135/90‑1 (MQ=255)
tCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAg > 1:2196661/1‑93 (MQ=255)
cACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGc > 1:2355169/1‑93 (MQ=255)
aCCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCt > 1:2331770/1‑93 (MQ=255)
ccGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTg < 1:5783432/93‑1 (MQ=255)
gTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGc < 2:4647135/93‑1 (MQ=255)
tACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCg < 2:847741/93‑1 (MQ=255)
ccTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTc < 1:866488/93‑1 (MQ=255)
ccTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTc > 2:2480628/1‑93 (MQ=255)
cTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCa > 2:555311/1‑93 (MQ=255)
ggCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCAcc < 1:4639566/93‑1 (MQ=255)
ggCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCAcc < 2:3554211/93‑1 (MQ=255)
aGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTgg < 2:5523775/93‑1 (MQ=255)
aGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTgg < 1:5956721/93‑1 (MQ=255)
gATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTggg > 1:3280031/1‑92 (MQ=255)
gATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgc > 2:1122231/1‑93 (MQ=255)
gATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgc > 1:4000925/1‑93 (MQ=255)
gATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGACGGCAGCTGGCGTCACCTGgc > 2:201972/1‑93 (MQ=255)
aTTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgcg > 1:3061794/1‑93 (MQ=255)
aTTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgcg > 2:1534912/1‑93 (MQ=255)
ttGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgcgc < 2:1803170/93‑1 (MQ=255)
ttGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGgcgc > 2:3535045/1‑93 (MQ=255)
tGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCt < 1:1351276/93‑1 (MQ=255)
gCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTg > 1:1039724/1‑93 (MQ=255)
cGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTgg < 1:6200979/93‑1 (MQ=255)
gATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTggg > 1:2465877/1‑93 (MQ=255)
gATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTggg > 1:6275602/1‑93 (MQ=255)
gATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTggg > 2:6115175/1‑93 (MQ=255)
aTGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGc > 1:1655930/1‑93 (MQ=255)
tGGCCGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCg < 2:2678890/93‑1 (MQ=255)
tGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCg < 2:3952295/93‑1 (MQ=255)
gACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGtg > 1:3161209/1‑93 (MQ=255)
cGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGtggc < 1:815525/93‑1 (MQ=255)
cAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGtggctgg > 1:5025983/1‑93 (MQ=255)
aGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGtggctggc > 1:534318/1‑93 (MQ=255)
ccAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGgctggctg < 2:3259458/93‑1 (MQ=255)
ccAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGgctggctg < 1:3509579/93‑1 (MQ=255)
cAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGctggctgg > 2:1478652/1‑93 (MQ=255)
cAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGctggctgg > 2:4395607/1‑93 (MQ=255)
gAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGag > 2:1647740/1‑92 (MQ=255)
gAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAt < 1:976936/93‑1 (MQ=255)
aaGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCGGGATg > 1:4865087/1‑93 (MQ=255)
aGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGc < 2:3701379/93‑1 (MQ=255)
ttACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGt > 2:6002490/1‑93 (MQ=255)
aCCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTa > 2:6039889/1‑93 (MQ=255)
ccGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTac < 1:2098629/93‑1 (MQ=255)
ccGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTac < 1:5183839/93‑1 (MQ=255)
ccGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTac < 1:698298/93‑1 (MQ=255)
cGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTaca > 1:3566510/1‑93 (MQ=255)
cAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACAcc > 1:1069863/1‑93 (MQ=255)
aGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACAccc > 2:5485713/1‑93 (MQ=255)
gCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCa < 2:5340038/93‑1 (MQ=255)
gCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCa < 2:1349274/93‑1 (MQ=255)
gCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCa < 2:1210145/93‑1 (MQ=255)
cGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAg < 1:2934281/93‑1 (MQ=255)
cGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAg < 2:5775338/93‑1 (MQ=255)
gTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAgg < 2:4531043/93‑1 (MQ=255)
gTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAgg < 1:199172/93‑1 (MQ=255)
|
CGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGG > NC_000913/4551524‑4551703
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGT > NC_000913/4551521‑4551707
|
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302533.4892313/94‑1 (MQ=60)
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302533.3969846/94‑1 (MQ=60)
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302533.3574073/94‑1 (MQ=60)
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302533.2089934/94‑1 (MQ=60)
CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCC < SRR4302533.1979294/94‑1 (MQ=60)
GCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTG > SRR4302533.1245088/1‑94 (MQ=60)
CTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGG < SRR4302533.1412622/94‑1 (MQ=60)
TGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTCCCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGA < SRR4302533.56620/94‑1 (MQ=60)
CTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACC > SRR4302533.104638/1‑94 (MQ=60)
CTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACC < SRR4302533.686959/94‑1 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCC > SRR4302533.3415442/1‑94 (MQ=60)
TGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTCGCAGATTGCGATGGACGGCAGCCAGCAGTTACCGCAGCGTCCGCTGGACCC > SRR4302533.4469687/1‑94 (MQ=60)
GATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCG < SRR4302533.6330035/94‑1 (MQ=60)
ATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGG < SRR4302533.1634414/94‑1 (MQ=60)
CGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTG > SRR4302533.5557211/1‑94 (MQ=60)
CGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTG < SRR4302533.4956352/94‑1 (MQ=60)
CGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTG > SRR4302533.6243017/1‑94 (MQ=60)
CGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTG > SRR4302533.3794545/1‑94 (MQ=60)
GAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGC > SRR4302533.453832/1‑94 (MQ=60)
CGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTC > SRR4302533.4101255/1‑94 (MQ=60)
GTTTCAGCACCCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCT < SRR4302533.3302043/94‑1 (MQ=60)
GTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCT > SRR4302533.4140157/1‑94 (MQ=60)
TTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTG < SRR4302533.5781414/94‑1 (MQ=60)
TTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTG > SRR4302533.1798941/1‑94 (MQ=60)
TTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGCTACCGCAGCGTCCGCTGGACCCGGTGCGTCTG > SRR4302533.1798942/1‑94 (MQ=60)
TTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGC > SRR4302533.680432/1‑94 (MQ=60)
TCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCA < SRR4302533.1856260/94‑1 (MQ=60)
CAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCAC < SRR4302533.1402181/94‑1 (MQ=60)
CAGCAACCCGTCTCTGCGTCACAGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCAC < SRR4302533.1885511/94‑1 (MQ=60)
AGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACC > SRR4302533.6334975/1‑94 (MQ=60)
AGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACC > SRR4302533.857355/1‑94 (MQ=60)
GCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGAAGCGTCAGCTGGACCCGGTGCGTCTGCACCT > SRR4302533.1840150/1‑94 (MQ=60)
CAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTG > SRR4302533.4564040/1‑94 (MQ=60)
CAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTG < SRR4302533.1394345/94‑1 (MQ=60)
CAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTG < SRR4302533.1851008/94‑1 (MQ=60)
ACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCA > SRR4302533.228588/1‑94 (MQ=60)
CCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGCGCGTCTGCACCTGCAAA > SRR4302533.5751609/1‑94 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAACAC > SRR4302533.529817/1‑94 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAC > SRR4302533.2631756/1‑94 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAC < SRR4302533.4183238/94‑1 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAC > SRR4302533.2581199/1‑94 (MQ=60)
GTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAAC > SRR4302533.2227759/1‑94 (MQ=60)
TCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACG < SRR4302533.2178916/94‑1 (MQ=60)
CTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGG > SRR4302533.314017/1‑94 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG > SRR4302533.4905429/1‑94 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG > SRR4302533.4905428/1‑94 (MQ=60)
CTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGCTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCG < SRR4302533.3325524/94‑1 (MQ=60)
TGTGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGG < SRR4302533.69298/94‑1 (MQ=60)
TGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGG < SRR4302533.33249/94‑1 (MQ=60)
TGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGG < SRR4302533.1659811/94‑1 (MQ=60)
GCGTCCCCGTACCTGGCAGATTGCGATTGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGC < SRR4302533.5783468/94‑1 (MQ=60)
GCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGC < SRR4302533.5737634/94‑1 (MQ=60)
CGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCG > SRR4302533.1394447/1‑94 (MQ=60)
GTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAG < SRR4302533.4797338/94‑1 (MQ=60)
GTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAG > SRR4302533.443213/1‑94 (MQ=60)
GTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAG > SRR4302533.2210197/1‑94 (MQ=60)
TCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGC > SRR4302533.2369733/1‑94 (MQ=60)
CACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCT > SRR4302533.2346207/1‑94 (MQ=60)
CACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCT < SRR4302533.3994509/94‑1 (MQ=60)
CACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCG > SRR4302533.1546087/1‑94 (MQ=60)
CCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGG < SRR4302533.3172946/94‑1 (MQ=60)
CCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGG < SRR4302533.5818361/94‑1 (MQ=60)
CGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGC < SRR4302533.4599770/94‑1 (MQ=60)
CGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGC > SRR4302533.5864995/1‑94 (MQ=60)
ACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTC < SRR4302533.2723273/94‑1 (MQ=60)
CCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCA < SRR4302533.871565/94‑1 (MQ=60)
CCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCA > SRR4302533.6318016/1‑94 (MQ=60)
CCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCA > SRR4302533.5290428/1‑94 (MQ=60)
GGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCT < SRR4302533.4667678/94‑1 (MQ=60)
GCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTG > SRR4302533.344648/1‑94 (MQ=60)
GCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTG < SRR4302533.3075145/94‑1 (MQ=60)
CAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGG < SRR4302533.2701346/94‑1 (MQ=60)
CAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGG < SRR4302533.6021870/94‑1 (MQ=60)
CAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGG > SRR4302533.1711892/1‑94 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGG > SRR4302533.3300280/1‑94 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC > SRR4302533.2034796/1‑94 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC < SRR4302533.3793421/94‑1 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC > SRR4302533.4025287/1‑94 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC < SRR4302533.5992755/94‑1 (MQ=60)
AGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGC > SRR4302533.320530/1‑94 (MQ=60)
GATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCG > SRR4302533.3080586/1‑94 (MQ=60)
GTTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGC < SRR4302533.371184/94‑1 (MQ=60)
TGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTG > SRR4302533.1045835/1‑94 (MQ=60)
TGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTG < SRR4302533.1359404/94‑1 (MQ=60)
GCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGG > SRR4302533.4130911/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302533.6313076/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG < SRR4302533.1109501/94‑1 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302533.2481087/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG > SRR4302533.2341916/1‑94 (MQ=60)
CGATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGG < SRR4302533.6238171/94‑1 (MQ=60)
GATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGC > SRR4302533.1665953/1‑94 (MQ=60)
ATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAGAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCG > SRR4302533.1987980/1‑94 (MQ=60)
ATGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCG > SRR4302533.1389291/1‑94 (MQ=60)
TGGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGG > SRR4302533.740237/1‑94 (MQ=60)
GGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTG > SRR4302533.63899/1‑94 (MQ=60)
GGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTG > SRR4302533.3180662/1‑94 (MQ=60)
GGACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTG < SRR4302533.5136907/94‑1 (MQ=60)
ACGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGC > SRR4302533.2298124/1‑94 (MQ=60)
CGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCT > SRR4302533.4961698/1‑94 (MQ=60)
CGGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCT < SRR4302533.820305/94‑1 (MQ=60)
GGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTG > SRR4302533.911986/1‑94 (MQ=60)
GGCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCAGGCGTCACCTGGCGCTGGGCGTGGCTG > SRR4302533.3562912/1‑94 (MQ=60)
GCAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGG > SRR4302533.5056417/1‑94 (MQ=60)
CAGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGC > SRR4302533.537497/1‑94 (MQ=60)
AGCCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCT < SRR4302533.1200931/94‑1 (MQ=60)
CCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGG > SRR4302533.2156517/1‑94 (MQ=60)
CCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGG < SRR4302533.3531215/94‑1 (MQ=60)
CCAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTCG > SRR4302533.1845023/1‑94 (MQ=60)
CAGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGA > SRR4302533.81694/1‑94 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAT < SRR4302533.5808181/94‑1 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAT > SRR4302533.4447023/1‑94 (MQ=60)
AGAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGAT < SRR4302533.1987927/94‑1 (MQ=60)
GAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATG < SRR4302533.982668/94‑1 (MQ=60)
GAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATG < SRR4302533.129210/94‑1 (MQ=60)
GAAGTTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCGGGATG > SRR4302533.4894570/1‑94 (MQ=60)
AGTTACCGCAGCGTCCGCTGGACCCGGCGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCG > SRR4302533.6062667/1‑94 (MQ=60)
TTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTT < SRR4302533.4881617/94‑1 (MQ=60)
TTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTT < SRR4302533.4172359/94‑1 (MQ=60)
TTACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTT < SRR4302533.1834833/94‑1 (MQ=60)
TACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTA > SRR4302533.2394938/1‑94 (MQ=60)
ACCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTAC < SRR4302533.934319/94‑1 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA < SRR4302533.702429/94‑1 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA < SRR4302533.5215132/94‑1 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA < SRR4302533.2111576/94‑1 (MQ=60)
CCGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACA > SRR4302533.3588488/1‑94 (MQ=60)
CGCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACAC > SRR4302533.5744588/1‑94 (MQ=60)
GCAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACC > SRR4302533.1076164/1‑94 (MQ=60)
CAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCC < SRR4302533.4480133/94‑1 (MQ=60)
CAGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCC > SRR4302533.241779/1‑94 (MQ=60)
AGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCA < SRR4302533.467923/94‑1 (MQ=60)
AGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCA > SRR4302533.5810218/1‑94 (MQ=60)
AGCGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGGTTCACCCA > SRR4302533.1391744/1‑94 (MQ=60)
CGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGG < SRR4302533.1872614/94‑1 (MQ=60)
CGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGG < SRR4302533.2952222/94‑1 (MQ=60)
CGTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGG < SRR4302533.482174/94‑1 (MQ=60)
GTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGG < SRR4302533.2352925/94‑1 (MQ=60)
GTCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGG < SRR4302533.200432/94‑1 (MQ=60)
TCCGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGC < SRR4302533.1122293/94‑1 (MQ=60)
CGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGggg > SRR4302533.2813041/1‑91 (MQ=60)
CGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGT < SRR4302533.2445590/94‑1 (MQ=60)
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CGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGT > NC_000913/4551521‑4551707
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
