Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,555,020 A→G M280T (ATG→ACG)  yjiE ← putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,555,0200AG99.8% 1355.6 / ‑5.1 415M280T (ATG→ACG) yjiEputative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (192/222);  total (192/223)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.06e-01

Only 100 of 425 total aligned reads displayed.

AGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG  >  NC_000913/4554928‑4555109
                                                                                            |                                                                                         
actccGAAGCTGGAGAATGTCAGCTAAGCACAATCTGCAGCTCGCGGAGGTCACGCCAGCAGTATTAGAAAACGGGATTCATGAGGGTATTCa                                                                                           >  2:1347309/5‑93 (MQ=255)
  tGCGACACTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTc                                                                                         <  1:1148474/93‑1 (MQ=255)
   gCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTcc                                                                                        <  1:4701478/93‑1 (MQ=255)
    cGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCg                                                                                       <  2:4443721/93‑1 (MQ=255)
    cGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCg                                                                                       <  2:6695130/93‑1 (MQ=255)
     gACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCgg                                                                                      >  1:7623252/1‑93 (MQ=255)
      aCGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGCTTCATGCGGGTATTCGTACGGt                                                                                     >  2:5220972/1‑93 (MQ=255)
       cGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTa                                                                                    <  1:6457923/93‑1 (MQ=255)
       cGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTa                                                                                    <  2:6474464/93‑1 (MQ=255)
       cGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTa                                                                                    <  1:1685819/93‑1 (MQ=255)
          tGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGc                                                                                 >  1:4655179/1‑93 (MQ=255)
            gtgaAGGTCAGCGAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCAt                                                                               <  2:8425777/91‑1 (MQ=255)
             agaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATa                                                                              >  2:2680688/1‑93 (MQ=255)
             agaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATa                                                                              >  1:6064385/1‑93 (MQ=255)
              gaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAg                                                                             <  2:5581820/93‑1 (MQ=255)
               aaTGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAgg                                                                            >  1:5260939/1‑93 (MQ=255)
                aTGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGc                                                                           >  2:3535668/1‑93 (MQ=255)
                 tGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGcc                                                                          >  1:6834094/1‑93 (MQ=255)
                 tGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGcc                                                                          >  2:5384109/1‑93 (MQ=255)
                 tGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGcc                                                                          <  2:8020837/93‑1 (MQ=255)
                   tCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTg                                                                        >  1:2750301/1‑93 (MQ=255)
                     aGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGaa                                                                      <  2:8594078/93‑1 (MQ=255)
                      gCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAAt                                                                     <  2:5824167/93‑1 (MQ=255)
                       cTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATc                                                                    <  1:1559055/93‑1 (MQ=255)
                       cTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATc                                                                    <  2:9235897/93‑1 (MQ=255)
                        tAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCg                                                                   <  2:6314571/93‑1 (MQ=255)
                        tAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCg                                                                   <  1:6296285/93‑1 (MQ=255)
                            cacaATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGAt                                                               <  1:7956138/93‑1 (MQ=255)
                            cacaATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGAt                                                               >  1:5487778/1‑93 (MQ=255)
                             acaATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATc                                                              >  2:8873722/1‑93 (MQ=255)
                             acaATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATc                                                              >  2:6609421/1‑93 (MQ=255)
                             acaATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATc                                                              <  1:309310/93‑1 (MQ=255)
                             acaATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATc                                                              <  2:1284604/93‑1 (MQ=255)
                              caATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCa                                                             >  1:3537970/1‑93 (MQ=255)
                                aTCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCAcc                                                           >  1:4325632/1‑93 (MQ=255)
                                aTCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCAcc                                                           <  2:1931462/93‑1 (MQ=255)
                                aTCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCAcc                                                           <  2:3676926/93‑1 (MQ=255)
                                  ctcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAg                                                         <  1:885448/93‑1 (MQ=255)
                                   tcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGt                                                        <  1:3945570/93‑1 (MQ=255)
                                    ccAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGtt                                                       <  1:6755883/93‑1 (MQ=255)
                                    ccAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGGATTCGTCCGGTATGCATAGGCCTGAATCGGGATGACCAGtt                                                       >  2:9034260/1‑93 (MQ=255)
                                      aGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGTCTGAATCGGGATCACCAGTTCg                                                     <  1:5080283/93‑1 (MQ=255)
                                      aGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCg                                                     >  2:231865/1‑93 (MQ=255)
                                       gCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGt                                                    <  1:1780643/93‑1 (MQ=255)
                                          cgcgCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTccc                                                 <  1:9319396/93‑1 (MQ=255)
                                             gcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAt                                              <  2:9660076/93‑1 (MQ=255)
                                             gcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAt                                              >  1:9206286/1‑93 (MQ=255)
                                             acAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAt                                              <  1:2230428/92‑1 (MQ=255)
                                                gTTCACGCCAGAAGCGTTCGGCAACGTGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCa                                           <  2:813826/93‑1 (MQ=255)
                                                gTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCa                                           <  2:1088739/93‑1 (MQ=255)
                                                 ttCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAg                                          >  2:6875133/1‑93 (MQ=255)
                                                 ttCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAg                                          <  1:702069/93‑1 (MQ=255)
                                                 ttCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAg                                          >  2:3778032/1‑93 (MQ=255)
                                                 ttCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAg                                          <  2:4980604/93‑1 (MQ=255)
                                                  tCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGt                                         >  1:3345804/1‑93 (MQ=255)
                                                    aCGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTAc                                       <  2:6114948/93‑1 (MQ=255)
                                                     cGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACa                                      >  1:10012068/1‑93 (MQ=255)
                                                      gCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACaa                                     >  1:5747553/1‑93 (MQ=255)
                                                       ccAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAc                                    >  2:7189974/1‑93 (MQ=255)
                                                       ccAGAAGCGTACGGCAACGGGATTCATGCGGTTATTCGTCCGGTATGCATAGGCCTGAATCGGTATCACCAGTTCGTCCCGATTCAGTACAAc                                    <  1:2634996/93‑1 (MQ=255)
                                                        cAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACg                                   >  2:7041819/1‑93 (MQ=255)
                                                         aGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGa                                  >  1:9872330/1‑93 (MQ=255)
                                                          gAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCCGTTCGTCCCGATTCAGTACAACGAg                                 >  2:9793858/1‑93 (MQ=255)
                                                          gAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTAAAACGAg                                 >  2:947984/1‑93 (MQ=255)
                                                             gCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCCCCAGTTCGTCCCGATTCAGTACAACGAGCtt                              <  2:2182971/93‑1 (MQ=255)
                                                              ggTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTc                             <  1:3245009/92‑1 (MQ=255)
                                                               gTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTcc                            <  2:2907305/93‑1 (MQ=255)
                                                                ttCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTccc                           >  1:1903975/1‑93 (MQ=255)
                                                                ttCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTccc                           >  1:2895451/1‑93 (MQ=255)
                                                                ttCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTccc                           >  1:8586796/1‑93 (MQ=255)
                                                                    gCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTg                       >  2:1601549/1‑93 (MQ=255)
                                                                     cAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGc                      <  1:7770184/93‑1 (MQ=255)
                                                                       aCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGa                    >  1:4259666/1‑93 (MQ=255)
                                                                       aCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGa                    >  2:7900306/1‑93 (MQ=255)
                                                                       aCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGa                    >  2:7408145/1‑93 (MQ=255)
                                                                          ggATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAAtt                 <  1:4179476/93‑1 (MQ=255)
                                                                           gATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAAttt                >  1:205830/1‑93 (MQ=255)
                                                                             ttCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCt              <  1:8141755/93‑1 (MQ=255)
                                                                             ttCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCt              >  1:5143350/1‑93 (MQ=255)
                                                                               cATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttg            >  2:4263754/1‑93 (MQ=255)
                                                                                aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           <  2:3065277/93‑1 (MQ=255)
                                                                                aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           <  2:399436/93‑1 (MQ=255)
                                                                                aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           >  2:7705062/1‑93 (MQ=255)
                                                                                aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           <  1:899884/93‑1 (MQ=255)
                                                                                 tGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgtt          <  2:2586923/93‑1 (MQ=255)
                                                                                    gggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGa       >  1:7253215/1‑93 (MQ=255)
                                                                                    gggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGa       <  2:9780979/93‑1 (MQ=255)
                                                                                    gggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGa       <  1:9431855/93‑1 (MQ=255)
                                                                                     ggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGAt      >  2:1402404/1‑93 (MQ=255)
                                                                                     ggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGAt      <  2:4770767/93‑1 (MQ=255)
                                                                                     ggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGAt      <  1:8295692/93‑1 (MQ=255)
                                                                                     ggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGATCGTCACGATTCAGTACAACGAGCTTTACGCTGCGCATTTCTTGTTggtt      >  1:4036544/1‑91 (MQ=255)
                                                                                       tATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATgg    >  1:4484210/1‑93 (MQ=255)
                                                                                       tATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATgg    >  2:6212819/1‑93 (MQ=255)
                                                                                       tATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATgg    <  1:974389/93‑1 (MQ=255)
                                                                                       tATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATgg    >  2:3379635/1‑93 (MQ=255)
                                                                                        aTTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGc   <  1:8498091/93‑1 (MQ=255)
                                                                                        aTTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGc   >  2:1787633/1‑93 (MQ=255)
                                                                                         ttCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCg  >  1:4906382/1‑93 (MQ=255)
                                                                                         ttCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCg  >  1:7529265/1‑93 (MQ=255)
                                                                                            |                                                                                         
AGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG  >  NC_000913/4554928‑4555109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.
CAGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACT  >  NC_000913/4554927‑4555113
                                                                                             |                                                                                             
CAGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCG                                                                                               <  SRR4302540.2650329/94‑1 (MQ=60)
CAGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCG                                                                                               >  SRR4302540.2195673/1‑94 (MQ=60)
CAGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCG                                                                                               >  SRR4302540.1281625/1‑94 (MQ=60)
CAGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCG                                                                                               <  SRR4302540.4040460/94‑1 (MQ=60)
  GTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTC                                                                                             >  SRR4302540.1999277/1‑94 (MQ=60)
  GTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTC                                                                                             <  SRR4302540.6329427/94‑1 (MQ=60)
  GTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTC                                                                                             >  SRR4302540.4549865/1‑94 (MQ=60)
   TGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCC                                                                                            <  SRR4302540.3576729/94‑1 (MQ=60)
   TGCGACACTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCC                                                                                            <  SRR4302540.1160449/94‑1 (MQ=60)
   GGCGACGCTTGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCC                                                                                            <  SRR4302540.7964643/94‑1 (MQ=60)
    GCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCG                                                                                           <  SRR4302540.4751724/94‑1 (MQ=60)
     CGAGGCTGAAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGG                                                                                          <  SRR4302540.8056531/94‑1 (MQ=60)
     CGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGG                                                                                          >  SRR4302540.7708986/1‑94 (MQ=60)
     CGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGG                                                                                          >  SRR4302540.4017527/1‑94 (MQ=60)
     CGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGG                                                                                          <  SRR4302540.5956099/94‑1 (MQ=60)
        CGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTAT                                                                                       <  SRR4302540.1704110/94‑1 (MQ=60)
        CGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTAT                                                                                       <  SRR4302540.1699621/94‑1 (MQ=60)
        CGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTAT                                                                                       <  SRR4302540.9807920/94‑1 (MQ=60)
        CGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTAT                                                                                       <  SRR4302540.3210322/94‑1 (MQ=60)
         GCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATG                                                                                      >  SRR4302540.5388260/1‑94 (MQ=60)
          CTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGC                                                                                     >  SRR4302540.8678679/1‑94 (MQ=60)
          CTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGC                                                                                     >  SRR4302540.4704998/1‑94 (MQ=60)
           TGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCA                                                                                    >  SRR4302540.9500919/1‑94 (MQ=60)
           TGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCA                                                                                    >  SRR4302540.5208881/1‑94 (MQ=60)
            GGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCAT                                                                                   >  SRR4302540.9908199/1‑94 (MQ=60)
            GGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCAT                                                                                   <  SRR4302540.8525775/94‑1 (MQ=60)
             GAGAATTTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATA                                                                                  <  SRR4302540.3322166/94‑1 (MQ=60)
              AGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAG                                                                                 <  SRR4302540.3754161/94‑1 (MQ=60)
              AGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAG                                                                                 <  SRR4302540.5350267/94‑1 (MQ=60)
              AGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAG                                                                                 <  SRR4302540.7639506/94‑1 (MQ=60)
              AGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAG                                                                                 >  SRR4302540.6790323/1‑94 (MQ=60)
              AGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAG                                                                                 <  SRR4302540.1963495/94‑1 (MQ=60)
               GAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGG                                                                                >  SRR4302540.5318336/1‑94 (MQ=60)
               GAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGG                                                                                <  SRR4302540.769525/94‑1 (MQ=60)
               GAATGGCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGG                                                                                <  SRR4302540.5713662/94‑1 (MQ=60)
                ACTGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGCGATTCATGCGGGTATTCGTCCGGTATGCATAGGC                                                                               <  SRR4302540.6456391/94‑1 (MQ=60)
                AATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGC                                                                               >  SRR4302540.3495702/1‑94 (MQ=60)
                AATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGC                                                                               <  SRR4302540.6456390/94‑1 (MQ=60)
                 ATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCC                                                                              >  SRR4302540.930862/1‑94 (MQ=60)
                 ATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCC                                                                              >  SRR4302540.4411155/1‑94 (MQ=60)
                 ATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCC                                                                              <  SRR4302540.4174569/94‑1 (MQ=60)
                 ATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCC                                                                              >  SRR4302540.6909784/1‑94 (MQ=60)
                  TGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCT                                                                             >  SRR4302540.2733609/1‑94 (MQ=60)
                  TGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCT                                                                             <  SRR4302540.4826578/94‑1 (MQ=60)
                  TGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCT                                                                             <  SRR4302540.787522/94‑1 (MQ=60)
                  TGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGCATTCGTCCGGTATGCATAGGACT                                                                             >  SRR4302540.1055708/1‑94 (MQ=60)
                   GTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTG                                                                            >  SRR4302540.2780020/1‑94 (MQ=60)
                    TCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGA                                                                           >  SRR4302540.1585273/1‑94 (MQ=60)
                    TCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGA                                                                           <  SRR4302540.1870279/94‑1 (MQ=60)
                      AGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAAT                                                                         >  SRR4302540.555476/1‑94 (MQ=60)
                      AGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAAT                                                                         >  SRR4302540.7489234/1‑94 (MQ=60)
                      AGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAAT                                                                         <  SRR4302540.7373459/94‑1 (MQ=60)
                       GCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATC                                                                        <  SRR4302540.4526649/94‑1 (MQ=60)
                       GCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATC                                                                        <  SRR4302540.3918548/94‑1 (MQ=60)
                       GCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATC                                                                        >  SRR4302540.4021805/1‑94 (MQ=60)
                        CTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCG                                                                       <  SRR4302540.1576181/94‑1 (MQ=60)
                        CTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCG                                                                       <  SRR4302540.3496715/94‑1 (MQ=60)
                        CTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCG                                                                       >  SRR4302540.5109552/1‑94 (MQ=60)
                        CTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCG                                                                       <  SRR4302540.430496/94‑1 (MQ=60)
                        CTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCG                                                                       >  SRR4302540.4026173/1‑94 (MQ=60)
                         TAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGG                                                                      <  SRR4302540.6366391/94‑1 (MQ=60)
                         TAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGG                                                                      <  SRR4302540.6353897/94‑1 (MQ=60)
                            GCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGAT                                                                   <  SRR4302540.171359/94‑1 (MQ=60)
                            GCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGCATTCGTACGGTATGCATAGGCCTGAATCGGGAT                                                                   >  SRR4302540.6547623/1‑94 (MQ=60)
                             CACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATC                                                                  <  SRR4302540.6202860/94‑1 (MQ=60)
                             CACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATC                                                                  <  SRR4302540.8048878/94‑1 (MQ=60)
                              ACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCA                                                                 <  SRR4302540.312378/94‑1 (MQ=60)
                              ACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCA                                                                 >  SRR4302540.3576599/1‑94 (MQ=60)
                                AATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACC                                                               >  SRR4302540.9503021/1‑94 (MQ=60)
                                AATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACC                                                               >  SRR4302540.4372726/1‑94 (MQ=60)
                                AATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACC                                                               >  SRR4302540.5939571/1‑94 (MQ=60)
                                 ATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCA                                                              >  SRR4302540.9396819/1‑94 (MQ=60)
                                 ATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCA                                                              <  SRR4302540.9385631/94‑1 (MQ=60)
                                  TCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAG                                                             <  SRR4302540.302944/94‑1 (MQ=60)
                                   CTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGT                                                            >  SRR4302540.2971325/1‑94 (MQ=60)
                                   CTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGT                                                            <  SRR4302540.894842/94‑1 (MQ=60)
                                   CTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGT                                                            >  SRR4302540.3062979/1‑94 (MQ=60)
                                    TCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTT                                                           <  SRR4302540.5206451/94‑1 (MQ=60)
                                     CCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTC                                                          <  SRR4302540.6830533/94‑1 (MQ=60)
                                     CCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTC                                                          <  SRR4302540.9450367/94‑1 (MQ=60)
                                     CCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTC                                                          >  SRR4302540.1618502/1‑94 (MQ=60)
                                       AGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGTCTGAATCGGGATCACCAGTTCGT                                                        <  SRR4302540.5135208/94‑1 (MQ=60)
                                        GCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTC                                                       <  SRR4302540.8823693/94‑1 (MQ=60)
                                        GCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTC                                                       <  SRR4302540.1799976/94‑1 (MQ=60)
                                        GCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTC                                                       <  SRR4302540.1799977/94‑1 (MQ=60)
                                        GCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTC                                                       >  SRR4302540.7027951/1‑94 (MQ=60)
                                         CTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCC                                                      <  SRR4302540.4853608/94‑1 (MQ=60)
                                          TCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCC                                                     <  SRR4302540.7163035/94‑1 (MQ=60)
                                          TCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCC                                                     <  SRR4302540.5496606/94‑1 (MQ=60)
                                           CGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCG                                                    <  SRR4302540.9430596/94‑1 (MQ=60)
                                            GCGCAGTTCACGCGAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGA                                                   <  SRR4302540.6886526/94‑1 (MQ=60)
                                            GCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGA                                                   <  SRR4302540.8542744/94‑1 (MQ=60)
                                             CGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAT                                                  >  SRR4302540.2110392/1‑94 (MQ=60)
                                             CGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAT                                                  <  SRR4302540.9273684/94‑1 (MQ=60)
                                              GCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATT                                                 >  SRR4302540.2581796/1‑94 (MQ=60)
                                              GCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATT                                                 >  SRR4302540.4440305/1‑94 (MQ=60)
                                              GCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATT                                                 <  SRR4302540.4275997/94‑1 (MQ=60)
                                              GCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATT                                                 <  SRR4302540.2892680/94‑1 (MQ=60)
                                              ACAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATT                                                 <  SRR4302540.2254452/94‑1 (MQ=60)
                                               CAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTC                                                >  SRR4302540.4729101/1‑94 (MQ=60)
                                               CAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCATCCCCATTC                                                >  SRR4302540.8506081/1‑94 (MQ=60)
                                                AGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCA                                               >  SRR4302540.1801501/1‑94 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGCTTCAG                                              >  SRR4302540.9312887/1‑94 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAG                                              >  SRR4302540.4418226/1‑94 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAG                                              <  SRR4302540.4273059/94‑1 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAG                                              >  SRR4302540.4064264/1‑94 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAG                                              <  SRR4302540.8090092/94‑1 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAG                                              <  SRR4302540.8349992/94‑1 (MQ=60)
                                                 GTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAG                                              >  SRR4302540.315716/1‑94 (MQ=60)
                                                  TTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGT                                             <  SRR4302540.709603/94‑1 (MQ=60)
                                                  TTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGT                                             <  SRR4302540.7720541/94‑1 (MQ=60)
                                                  TTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGT                                             <  SRR4302540.7720542/94‑1 (MQ=60)
                                                  TTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGT                                             >  SRR4302540.3382508/1‑94 (MQ=60)
                                                   TCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTA                                            <  SRR4302540.6875886/94‑1 (MQ=60)
                                                    CACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTAC                                           <  SRR4302540.211220/94‑1 (MQ=60)
                                                     ACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACA                                          >  SRR4302540.10128643/1‑94 (MQ=60)
                                                     ACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACA                                          <  SRR4302540.1138467/94‑1 (MQ=60)
                                                      CGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAA                                         >  SRR4302540.5810954/1‑94 (MQ=60)
                                                       GCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAC                                        <  SRR4302540.490128/94‑1 (MQ=60)
                                                       GCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAC                                        <  SRR4302540.4295739/94‑1 (MQ=60)
                                                       GCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAC                                        <  SRR4302540.9825571/94‑1 (MQ=60)
                                                       GCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAC                                        <  SRR4302540.6547010/94‑1 (MQ=60)
                                                        CCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACG                                       >  SRR4302540.6254444/1‑94 (MQ=60)
                                                        CCAGAAGCGTACGGCAACGGGATTCATGCGGTTATTCGTCCGGTATGCATAGGCCTGAATCGGTATCACCAGTTCGTCCCGATTCAGTACAACG                                       <  SRR4302540.2663528/94‑1 (MQ=60)
                                                         CAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGTTTCAGTACAACGA                                      >  SRR4302540.9987624/1‑94 (MQ=60)
                                                         CAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGA                                      <  SRR4302540.5127453/94‑1 (MQ=60)
                                                          AGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTCCAACGAG                                     >  SRR4302540.1854664/1‑94 (MQ=60)
                                                          AGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAG                                     <  SRR4302540.3325200/94‑1 (MQ=60)
                                                           GAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCATTACAACAAGC                                    >  SRR4302540.2589855/1‑94 (MQ=60)
                                                            AAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCT                                   <  SRR4302540.7844572/94‑1 (MQ=60)
                                                            AAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCT                                   <  SRR4302540.3300474/94‑1 (MQ=60)
                                                            AAGCGTGCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCT                                   <  SRR4302540.3161996/94‑1 (MQ=60)
                                                             AGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTT                                  >  SRR4302540.6956361/1‑94 (MQ=60)
                                                             AGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTT                                  <  SRR4302540.2771044/94‑1 (MQ=60)
                                                             AGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTT                                  <  SRR4302540.6597953/94‑1 (MQ=60)
                                                             AGCGTTCGCGAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCTCCAGTTCGTCCCGATTCAGTACAACGAGCTT                                  <  SRR4302540.2680224/94‑1 (MQ=60)
                                                               GGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCC                                <  SRR4302540.3280336/94‑1 (MQ=60)
                                                               CGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCC                                <  SRR4302540.8782455/94‑1 (MQ=60)
                                                               CGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCC                                <  SRR4302540.8261926/94‑1 (MQ=60)
                                                                GTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCC                               >  SRR4302540.3516663/1‑94 (MQ=60)
                                                                GTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCC                               >  SRR4302540.8686616/1‑94 (MQ=60)
                                                                GTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCC                               >  SRR4302540.2927028/1‑94 (MQ=60)
                                                                GTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCC                               >  SRR4302540.1924787/1‑94 (MQ=60)
                                                                   CGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCT                            >  SRR4302540.5265529/1‑94 (MQ=60)
                                                                   CGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCT                            <  SRR4302540.5163697/94‑1 (MQ=60)
                                                                    GGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTG                           >  SRR4302540.5067929/1‑94 (MQ=60)
                                                                    GGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTG                           >  SRR4302540.9883128/1‑94 (MQ=60)
                                                                     GCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGC                          <  SRR4302540.172058/94‑1 (MQ=60)
                                                                      CAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATGACCAGTTCGTCCCCATTCAGTACAACGAGCTTCCCGCTGCG                         >  SRR4302540.1210620/1‑94 (MQ=60)
                                                                      CAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCG                         <  SRR4302540.7861029/94‑1 (MQ=60)
                                                                       AACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGA                        >  SRR4302540.4306003/1‑94 (MQ=60)
                                                                       AACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGA                        >  SRR4302540.9221532/1‑94 (MQ=60)
                                                                       AACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGA                        >  SRR4302540.9085261/1‑94 (MQ=60)
                                                                       AACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGGCCCGATTCAGTACAACGAGCTTCCCCATGCGA                        >  SRR4302540.1096905/1‑94 (MQ=60)
                                                                        ACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGGTCGTCCCGATTCAGTACAACGAGCTTCCCCCTGCGAA                       >  SRR4302540.8659005/1‑94 (MQ=60)
                                                                          GGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCCTCCCGCTGCGAATT                     >  SRR4302540.9060094/1‑94 (MQ=60)
                                                                           GGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTT                    <  SRR4302540.4224862/94‑1 (MQ=60)
                                                                           GGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTT                    >  SRR4302540.207848/1‑94 (MQ=60)
                                                                           GGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTT                    <  SRR4302540.4742432/94‑1 (MQ=60)
                                                                             ATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCT                  >  SRR4302540.457944/1‑94 (MQ=60)
                                                                             ATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCT                  >  SRR4302540.5717370/1‑94 (MQ=60)
                                                                             ATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCT                  >  SRR4302540.5199051/1‑94 (MQ=60)
                                                                              TTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTT                 >  SRR4302540.902516/1‑94 (MQ=60)
                                                                              TTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTT                 <  SRR4302540.8236256/94‑1 (MQ=60)
                                                                               TCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTG                <  SRR4302540.4174778/94‑1 (MQ=60)
                                                                                CATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGT               >  SRR4302540.4733567/1‑94 (MQ=60)
                                                                                 ATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTT              >  SRR4302540.2200322/1‑94 (MQ=60)
                                                                                 ATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTT              >  SRR4302540.2867521/1‑94 (MQ=60)
                                                                                 ATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTT              <  SRR4302540.909448/94‑1 (MQ=60)
                                                                                 ATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTT              >  SRR4302540.5726991/1‑94 (MQ=60)
                                                                                 ATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTT              >  SRR4302540.10048886/1‑94 (MQ=60)
                                                                                 ATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTT              <  SRR4302540.5015489/94‑1 (MQ=60)
                                                                                   GCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGG            >  SRR4302540.889507/1‑94 (MQ=60)
                                                                                    CGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGA           >  SRR4302540.1494116/1‑94 (MQ=60)
                                                                                    CGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGA           >  SRR4302540.7334157/1‑94 (MQ=60)
                                                                                     GGGTATTTGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGAT          <  SRR4302540.9543887/94‑1 (MQ=60)
                                                                                     GGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGAT          <  SRR4302540.9543888/94‑1 (MQ=60)
                                                                                     GGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGATCGTCACGATTCAGTACAACGAGCTTTACGCTGCGCATTTCTTGTTGGTT          >  SRR4302540.4080065/1‑94 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGTATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         <  SRR4302540.8190032/94‑1 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         >  SRR4302540.7564771/1‑94 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         >  SRR4302540.4347976/1‑94 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         <  SRR4302540.748886/94‑1 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         >  SRR4302540.6111677/1‑94 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         <  SRR4302540.2370393/94‑1 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         <  SRR4302540.8190033/94‑1 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         <  SRR4302540.6483132/94‑1 (MQ=60)
                                                                                      GGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATG         <  SRR4302540.8392021/94‑1 (MQ=60)
                                                                                       GTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGG        <  SRR4302540.8925045/94‑1 (MQ=60)
                                                                                       GTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGG        >  SRR4302540.4532845/1‑94 (MQ=60)
                                                                                        TATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGG       >  SRR4302540.705978/1‑94 (MQ=60)
                                                                                        TATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGC       <  SRR4302540.721578/94‑1 (MQ=60)
                                                                                        TATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGC       <  SRR4302540.984396/94‑1 (MQ=60)
                                                                                         ATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG      <  SRR4302540.5138874/94‑1 (MQ=60)
                                                                                         ATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG      <  SRR4302540.8596835/94‑1 (MQ=60)
                                                                                         ATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG      >  SRR4302540.7613543/1‑94 (MQ=60)
                                                                                           TCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTA    <  SRR4302540.9018662/94‑1 (MQ=60)
                                                                                           TCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTA    <  SRR4302540.9724276/94‑1 (MQ=60)
                                                                                             GTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGcagtcct  >  SRR4302540.6827334/1‑87 (MQ=60)
                                                                                             GTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACT  >  SRR4302540.3603293/1‑94 (MQ=60)
                                                                                             GTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACT  >  SRR4302540.6827332/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGTGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACT  >  NC_000913/4554927‑4555113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑