Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,572,726	T→C	P341P (CCT→CCC)	yjiU →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,572,726	0	T	C	100.0%	1342.6 / NA	414	P341P (CCT→CCC)	yjiU	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (204/210); total (204/210)

Only 100 of 436 total aligned reads displayed.

CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA  >  NC_000913/4572636‑4572815

ccATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCaa                                                                                         >  2:1835332/1‑93 (MQ=255)

  aTTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAc                                                                                       <  2:2524927/93‑1 (MQ=255)

   ttATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg                                                                                      >  2:7802126/1‑93 (MQ=255)

   ntNTCTTNAGCCTGAAGTGTTNAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg                                                                                      <  1:7321103/92‑1 (MQ=255)

    tATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACgg                                                                                     >  1:7515092/1‑93 (MQ=255)

     aTCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGa                                                                                    >  2:6605120/1‑93 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   >  1:6789871/1‑93 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   >  1:50639/1‑93 (MQ=255)

       cTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACt                                                                                  >  1:3097963/1‑93 (MQ=255)

          aaGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAc                                                                               >  2:3185562/1‑93 (MQ=255)

           aGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACa                                                                              <  2:3603110/93‑1 (MQ=255)

            gCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAg                                                                             <  1:7882372/93‑1 (MQ=255)

              cTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGcc                                                                           >  2:6965675/1‑93 (MQ=255)

              cTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGcc                                                                           >  2:5001985/1‑93 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          >  1:820530/1‑93 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          <  2:5284400/93‑1 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          >  2:8928713/1‑93 (MQ=255)

                gAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTg                                                                         >  2:6219488/1‑93 (MQ=255)

                gAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTg                                                                         <  1:4776588/93‑1 (MQ=255)

                gAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTg                                                                         >  1:9179740/1‑93 (MQ=255)

                gAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTg                                                                         >  1:637932/1‑93 (MQ=255)

                 aaGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTgg                                                                        >  2:5152509/1‑93 (MQ=255)

                   gtgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaa                                                                      >  2:3326593/1‑93 (MQ=255)

                   gtgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaa                                                                      >  1:7239649/1‑93 (MQ=255)

                    tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa                                                                     >  1:1198542/1‑93 (MQ=255)

                    tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa                                                                     <  2:2372578/93‑1 (MQ=255)

                    tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa                                                                     >  2:7129521/1‑93 (MQ=255)

                     gtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAac                                                                    <  2:3416808/93‑1 (MQ=255)

                      tttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAaca                                                                   <  1:9823151/93‑1 (MQ=255)

                      tttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAaca                                                                   >  2:5569068/1‑93 (MQ=255)

                       ttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAacac                                                                  <  2:266732/93‑1 (MQ=255)

                         aaTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAg                                                                >  1:5219485/1‑93 (MQ=255)

                         aaTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAg                                                                <  1:3540381/93‑1 (MQ=255)

                          aTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgg                                                               >  2:5851597/1‑93 (MQ=255)

                          aTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgg                                                               <  1:8822591/93‑1 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAGTTCATGCGTCGCCCCCAACGGACTAACAGCCTGGAAACACAggg                                                              >  1:373051/1‑93 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAggg                                                              >  1:4483090/1‑93 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAggg                                                              >  2:6513543/1‑93 (MQ=255)

                                aCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTgg                                                         <  2:2758578/93‑1 (MQ=255)

                                   gcggcCCTCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTc                                                      <  2:3983343/93‑1 (MQ=255)

                                        ccccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggtt                                                 <  1:1410945/93‑1 (MQ=255)

                                         cccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttg                                                <  2:1335256/93‑1 (MQ=255)

                                          ccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttgg                                               <  1:2560738/93‑1 (MQ=255)

                                           cTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggt                                              >  2:8223071/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGTAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             <  2:4061355/93‑1 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             >  2:9888571/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             <  2:4936850/93‑1 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAggttggtt                                             >  1:833660/1‑93 (MQ=255)

                                             tAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTa                                            >  1:3826287/1‑93 (MQ=255)

                                              aaGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAc                                           <  2:9658995/93‑1 (MQ=255)

                                              aaGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAc                                           <  2:7412208/93‑1 (MQ=255)

                                                gCTTTCTTAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCa                                         <  1:2794562/93‑1 (MQ=255)

                                                gCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCa                                         <  2:4291727/93‑1 (MQ=255)

                                                acTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCa                                         <  2:1942397/92‑1 (MQ=255)

                                                acTTTCTGAAATGTTGTTGTTCCCGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCa                                         <  1:2763667/92‑1 (MQ=255)

                                                 cTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAg                                        <  1:1849271/93‑1 (MQ=255)

                                                  tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGGTGGTTAcgacg                                       >  2:1491903/1‑89 (MQ=255)

                                                       gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTg                                  >  2:733095/1‑93 (MQ=255)

                                                       gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTg                                  >  1:8031091/1‑93 (MQ=255)

                                                        aaaTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCACGGGCTgg                                 >  1:6162072/1‑93 (MQ=255)

                                                         aaTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGga                                <  1:9656441/93‑1 (MQ=255)

                                                          aTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgag                               >  1:1094068/1‑93 (MQ=255)

                                                          aTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgag                               >  1:4139780/1‑93 (MQ=255)

                                                           tgttgttgtTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgaga                              >  1:2233112/1‑93 (MQ=255)

                                                           tgttgttgtTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgaga                              >  2:4540195/1‑93 (MQ=255)

                                                            gttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaa                             >  2:3682485/1‑93 (MQ=255)

                                                            gttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaa                             >  2:1097997/1‑93 (MQ=255)

                                                            gttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaa                             >  1:5976557/1‑93 (MQ=255)

                                                             ttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaaa                            >  1:89629/1‑93 (MQ=255)

                                                             ttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGGTACCAGGGGCTGGAGaaa                            >  2:860033/1‑93 (MQ=255)

                                                              tgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaaaa                           <  1:994034/93‑1 (MQ=255)

                                                              tgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaaaa                           >  1:7101192/1‑93 (MQ=255)

                                                                 tgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAc                        <  1:6587843/93‑1 (MQ=255)

                                                                  gttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACa                       <  1:4221313/93‑1 (MQ=255)

                                                                  gttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACa                       <  1:1765203/93‑1 (MQ=255)

                                                                  gttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACa                       <  1:9399289/93‑1 (MQ=255)

                                                                  gttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACa                       <  2:3782173/93‑1 (MQ=255)

                                                                    tCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATa                     >  2:2261806/1‑93 (MQ=255)

                                                                    tCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATa                     <  2:8436052/93‑1 (MQ=255)

                                                                    tCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATa                     <  2:6012873/93‑1 (MQ=255)

                                                                      cGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaaa                   >  1:9281797/1‑92 (MQ=255)

                                                                        ggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAagag                 >  2:1645776/1‑93 (MQ=255)

                                                                        ggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAagag                 <  2:8047013/93‑1 (MQ=255)

                                                                        ggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAagag                 <  1:3181522/93‑1 (MQ=255)

                                                                        ggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAagag                 <  2:9047809/93‑1 (MQ=255)

                                                                          aaTTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGcc               <  2:6869212/93‑1 (MQ=255)

                                                                          aaTTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGcc               <  1:2139872/93‑1 (MQ=255)

                                                                            ttCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGcccc             >  1:492473/1‑93 (MQ=255)

                                                                            tgcATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGATCAGGCTGGTTACCAGTGGCTGGAGGAAATACATAAGAGgccc             >  2:7025626/3‑93 (MQ=255)

                                                                             tCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCt            <  2:5978909/93‑1 (MQ=255)

                                                                              cATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATCAATAAGAGCCCAtt           >  2:3039571/1‑93 (MQ=255)

                                                                               aTGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTg          >  2:6361716/1‑93 (MQ=255)

                                                                                tGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGc         >  1:5770768/1‑93 (MQ=255)

                                                                                   gTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACt      <  1:769948/93‑1 (MQ=255)

                                                                                    tCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTg     <  1:7993252/93‑1 (MQ=255)

                                                                                    tCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAGGGTGGGTACCCGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTg     >  2:4668537/1‑93 (MQ=255)

                                                                                     cGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTgg    <  2:8854551/93‑1 (MQ=255)

                                                                                      gCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGc   <  2:4813761/93‑1 (MQ=255)

                                                                                       ccccAAACGGCCTAACAGCCTGGAAACACAGGGGCTGGTTCAGGGTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCa  >  2:92613/1‑93 (MQ=255)

                                                                                       ccccAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCa  >  1:6952715/1‑93 (MQ=255)

CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA  >  NC_000913/4572636‑4572815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 212 total aligned reads displayed.

AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA  >  NC_000913/4572634‑4572819

AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCA                                                                                              <  SRR4302540.3250325/94‑1 (MQ=60)

  CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAA                                                                                            >  SRR4302540.9849339/1‑94 (MQ=60)

  CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAA                                                                                            >  SRR4302540.757711/1‑94 (MQ=60)

   CATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAC                                                                                           <  SRR4302540.6243352/94‑1 (MQ=60)

   CATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAC                                                                                           <  SRR4302540.5435940/94‑1 (MQ=60)

   CATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAC                                                                                           <  SRR4302540.7704365/94‑1 (MQ=60)

   CATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAC                                                                                           <  SRR4302540.8181028/94‑1 (MQ=60)

    ATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACG                                                                                          >  SRR4302540.9186241/1‑94 (MQ=60)

    ATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACG                                                                                          >  SRR4302540.182548/1‑94 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         <  SRR4302540.3944663/94‑1 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         >  SRR4302540.5792104/1‑94 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         <  SRR4302540.7402867/94‑1 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         <  SRR4302540.7402869/94‑1 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         >  SRR4302540.7599112/1‑94 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         <  SRR4302540.4758359/94‑1 (MQ=60)

     TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         >  SRR4302540.848076/1‑94 (MQ=60)

     NTNTCTTNAGCCTGAAGTGTTNAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         <  SRR4302540.7402868/94‑1 (MQ=60)

       ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC                                                                                       >  SRR4302540.6864959/1‑94 (MQ=60)

       ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC                                                                                       >  SRR4302540.51147/1‑94 (MQ=60)

       ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC                                                                                       >  SRR4302540.1224290/1‑94 (MQ=60)

        TCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACT                                                                                      >  SRR4302540.3131913/1‑94 (MQ=60)

        TCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACT                                                                                      >  SRR4302540.722729/1‑94 (MQ=60)

          TTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAA                                                                                    <  SRR4302540.2231721/94‑1 (MQ=60)

          TTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAA                                                                                    >  SRR4302540.1151823/1‑94 (MQ=60)

            AAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGCATTCATGCGTCGCCCCAAACGGACTCACA                                                                                  >  SRR4302540.6951599/1‑94 (MQ=60)

            AAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACA                                                                                  <  SRR4302540.1575908/94‑1 (MQ=60)

             AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG                                                                                 <  SRR4302540.6858961/94‑1 (MQ=60)

             AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG                                                                                 <  SRR4302540.83054/94‑1 (MQ=60)

             AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG                                                                                 <  SRR4302540.6892053/94‑1 (MQ=60)

              GCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGC                                                                                <  SRR4302540.7974410/94‑1 (MQ=60)

                CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              >  SRR4302540.829250/1‑94 (MQ=60)

                CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              >  SRR4302540.4235237/1‑94 (MQ=60)

                CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              <  SRR4302540.652032/94‑1 (MQ=60)

                 TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             <  SRR4302540.2242416/94‑1 (MQ=60)

                 TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             >  SRR4302540.9289841/1‑94 (MQ=60)

                 TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             >  SRR4302540.2634846/1‑94 (MQ=60)

                 TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             <  SRR4302540.8103938/94‑1 (MQ=60)

                 TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             >  SRR4302540.644718/1‑94 (MQ=60)

                 TGAAGGGTTTAATGAAAACGGCGGGCCCCTTAAGCTTTCTGAAATGTTGTTGCTCCGGGCATTCATGCCTCGCCCCAAACGGACTAACAGTCTG                                                                             >  SRR4302540.8465654/1‑94 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302540.1443545/94‑1 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302540.30361/94‑1 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302540.9305597/94‑1 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            >  SRR4302540.8000047/1‑94 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302540.4827623/94‑1 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302540.7078113/94‑1 (MQ=60)

                  GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302540.4982046/94‑1 (MQ=60)

                   AAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGGATTCATGCGTCGCCCCAAACCGACTAACAGCCTGGA                                                                           >  SRR4302540.1479474/1‑94 (MQ=60)

                    AGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAA                                                                          >  SRR4302540.3418945/1‑94 (MQ=60)

                    AGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAA                                                                          >  SRR4302540.7320400/1‑94 (MQ=60)

                     GTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAA                                                                         >  SRR4302540.6717995/1‑94 (MQ=60)

                     GTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAA                                                                         >  SRR4302540.1210873/1‑94 (MQ=60)

                        TTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACAC                                                                      <  SRR4302540.9938071/94‑1 (MQ=60)

                        TTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACAC                                                                      <  SRR4302540.223227/94‑1 (MQ=60)

                         TTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACA                                                                     <  SRR4302540.4881121/94‑1 (MQ=60)

                         TTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACA                                                                     <  SRR4302540.9929782/94‑1 (MQ=60)

                         TTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACA                                                                     <  SRR4302540.6062807/94‑1 (MQ=60)

                          TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAG                                                                    <  SRR4302540.2333012/94‑1 (MQ=60)

                          TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAG                                                                    >  SRR4302540.5276385/1‑94 (MQ=60)

                           AATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGG                                                                   <  SRR4302540.3579044/94‑1 (MQ=60)

                            ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAGTTCATGCGTCGCCCCCAACGGACTAACAGCCTGGAAACACAGGG                                                                  >  SRR4302540.376906/1‑94 (MQ=60)

                            ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  <  SRR4302540.8924611/94‑1 (MQ=60)

                            ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  >  SRR4302540.4584096/1‑94 (MQ=60)

                            ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  >  SRR4302540.376905/1‑94 (MQ=60)

                            ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  >  SRR4302540.4531711/1‑94 (MQ=60)

                              GAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGC                                                                >  SRR4302540.8096201/1‑94 (MQ=60)

                              GAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACAAACAGCCTGGAAACACAGGGGC                                                                <  SRR4302540.4152655/94‑1 (MQ=60)

                               AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT                                                               >  SRR4302540.10025714/1‑94 (MQ=60)

                               AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT                                                               >  SRR4302540.419887/1‑94 (MQ=60)

                                AAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTG                                                              <  SRR4302540.8273304/94‑1 (MQ=60)

                                AAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTG                                                              <  SRR4302540.8273306/94‑1 (MQ=60)

                                 AACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGG                                                             <  SRR4302540.5065329/94‑1 (MQ=60)

                                 AACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGG                                                             <  SRR4302540.8137156/94‑1 (MQ=60)

                                 AACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGG                                                             >  SRR4302540.4956346/1‑94 (MQ=60)

                                  ACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGT                                                            <  SRR4302540.10020256/94‑1 (MQ=60)

                                   CGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTT                                                           >  SRR4302540.9427816/1‑94 (MQ=60)

                                   CGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTT                                                           >  SRR4302540.8954470/1‑94 (MQ=60)

                                    GGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTC                                                          <  SRR4302540.10092305/94‑1 (MQ=60)

                                    GGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTC                                                          >  SRR4302540.37030/1‑94 (MQ=60)

                                     GCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCA                                                         <  SRR4302540.2141523/94‑1 (MQ=60)

                                     GCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCA                                                         <  SRR4302540.2128546/94‑1 (MQ=60)

                                       GGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGG                                                       >  SRR4302540.1191799/1‑94 (MQ=60)

                                       GGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGG                                                       >  SRR4302540.4268075/1‑94 (MQ=60)

                                          CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    <  SRR4302540.1426154/94‑1 (MQ=60)

                                          CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    <  SRR4302540.3677549/94‑1 (MQ=60)

                                          CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    >  SRR4302540.8565923/1‑94 (MQ=60)

                                          CCCCTGAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    <  SRR4302540.1426153/94‑1 (MQ=60)

                                          CCCCGTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    <  SRR4302540.3091088/94‑1 (MQ=60)

                                           CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG                                                   >  SRR4302540.4723183/1‑94 (MQ=60)

                                           CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG                                                   >  SRR4302540.7892906/1‑94 (MQ=60)

                                           CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG                                                   >  SRR4302540.7241170/1‑94 (MQ=60)

                                            CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT                                                  <  SRR4302540.3477729/94‑1 (MQ=60)

                                            CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT                                                  <  SRR4302540.2588344/94‑1 (MQ=60)

                                            CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT                                                  >  SRR4302540.7026282/1‑94 (MQ=60)

                                            CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGGTGGT                                                  >  SRR4302540.8624910/1‑94 (MQ=60)

                                             CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT                                                 >  SRR4302540.4269095/1‑94 (MQ=60)

                                             CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT                                                 <  SRR4302540.8797151/94‑1 (MQ=60)

                                             CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT                                                 >  SRR4302540.321318/1‑94 (MQ=60)

                                             CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAGGTTGGTT                                                 >  SRR4302540.842511/1‑94 (MQ=60)

                                              TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTA                                                <  SRR4302540.7339053/94‑1 (MQ=60)

                                              TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTA                                                >  SRR4302540.5817668/1‑94 (MQ=60)

                                              TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTA                                                >  SRR4302540.5041404/1‑94 (MQ=60)

                                              TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTA                                                >  SRR4302540.3815731/1‑94 (MQ=60)

                                              TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTGCAGGTTGGTTA                                                >  SRR4302540.3831642/1‑94 (MQ=60)

                                               TAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAC                                               <  SRR4302540.9110384/94‑1 (MQ=60)

                                                AAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACC                                              <  SRR4302540.4460550/94‑1 (MQ=60)

                                                AAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACC                                              >  SRR4302540.3802534/1‑94 (MQ=60)

                                                  GCTTTCTTAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG                                            <  SRR4302540.2824735/94‑1 (MQ=60)

                                                  GCTTTCTGAAATGTTGTTGTTCCGGGAATTCATTCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG                                            <  SRR4302540.2793526/94‑1 (MQ=60)

                                                  GCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG                                            >  SRR4302540.9841906/1‑94 (MQ=60)

                                                  GCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG                                            <  SRR4302540.2824734/94‑1 (MQ=60)

                                                  ACTTTCTGAAATGTTGTTGTTCCCGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG                                            <  SRR4302540.2793525/94‑1 (MQ=60)

                                                   CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           <  SRR4302540.1869552/94‑1 (MQ=60)

                                                    TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG                                          <  SRR4302540.5970853/94‑1 (MQ=60)

                                                    TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG                                          >  SRR4302540.1241238/1‑94 (MQ=60)

                                                     TTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGG                                         <  SRR4302540.279361/94‑1 (MQ=60)

                                                       CTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCT                                       <  SRR4302540.6513818/94‑1 (MQ=60)

                                                       CTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAGGTTGGTTACCAGGGGCT                                       >  SRR4302540.2150912/1‑94 (MQ=60)

                                                        TGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTG                                      >  SRR4302540.8124461/1‑94 (MQ=60)

                                                         GAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCACGGGCTGG                                     >  SRR4302540.6230739/1‑94 (MQ=60)

                                                           AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   >  SRR4302540.3079867/1‑94 (MQ=60)

                                                           AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302540.9770116/94‑1 (MQ=60)

                                                           AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   >  SRR4302540.1105315/1‑94 (MQ=60)

                                                           AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302540.598428/94‑1 (MQ=60)

                                                           AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   >  SRR4302540.6034334/1‑94 (MQ=60)

                                                           AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   >  SRR4302540.4184578/1‑94 (MQ=60)

                                                            ATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGA                                  >  SRR4302540.2257146/1‑94 (MQ=60)

                                                            ATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGA                                  >  SRR4302540.7391450/1‑94 (MQ=60)

                                                             TGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAA                                 <  SRR4302540.2796768/94‑1 (MQ=60)

                                                             TGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAA                                 >  SRR4302540.6042718/1‑94 (MQ=60)

                                                              GTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAA                                >  SRR4302540.7991655/1‑94 (MQ=60)

                                                              GTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAA                                >  SRR4302540.90572/1‑94 (MQ=60)

                                                               TTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAA                               >  SRR4302540.7180204/1‑94 (MQ=60)

                                                                TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAT                              <  SRR4302540.1004160/94‑1 (MQ=60)

                                                                 GTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATA                             >  SRR4302540.7287649/1‑94 (MQ=60)

                                                                   TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCCGGGGCTGGAGAAAATACA                           >  SRR4302540.5058911/1‑94 (MQ=60)

                                                                   TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA                           >  SRR4302540.5249844/1‑94 (MQ=60)

                                                                   TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA                           >  SRR4302540.5249843/1‑94 (MQ=60)

                                                                   TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA                           <  SRR4302540.6660814/94‑1 (MQ=60)

                                                                    GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT                          <  SRR4302540.9511115/94‑1 (MQ=60)

                                                                    GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT                          >  SRR4302540.9584285/1‑94 (MQ=60)

                                                                    GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT                          <  SRR4302540.1784349/94‑1 (MQ=60)

                                                                    GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT                          <  SRR4302540.4267269/94‑1 (MQ=60)

                                                                    GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT                          <  SRR4302540.1784348/94‑1 (MQ=60)

                                                                    GTGCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT                          <  SRR4302540.4267271/94‑1 (MQ=60)

                                                                     TTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATA                         <  SRR4302540.7817490/94‑1 (MQ=60)

                                                                     TTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATA                         <  SRR4302540.7817489/94‑1 (MQ=60)

                                                                     TTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATA                         <  SRR4302540.8943057/94‑1 (MQ=60)

                                                                     TTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGGTGGTTACCAGGGGCTGGAGAAAATACATA                         >  SRR4302540.9680210/1‑94 (MQ=60)

                                                                      TCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAA                        <  SRR4302540.3343750/94‑1 (MQ=60)

                                                                      TCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCACGTTGGTTACCAGGGGCTGGAGAAAATACATAA                        >  SRR4302540.5914951/1‑94 (MQ=60)

                                                                       CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302540.7094534/94‑1 (MQ=60)

                                                                       CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       >  SRR4302540.611072/1‑94 (MQ=60)

                                                                       CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302540.9846294/94‑1 (MQ=60)

                                                                       CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAA                       >  SRR4302540.9392735/1‑94 (MQ=60)

                                                                        CGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGA                      <  SRR4302540.6239878/94‑1 (MQ=60)

                                                                         GGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAG                     >  SRR4302540.3818844/1‑94 (MQ=60)

                                                                         GGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAG                     <  SRR4302540.9479565/94‑1 (MQ=60)

                                                                          GGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGC                    <  SRR4302540.3216088/94‑1 (MQ=60)

                                                                           GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAGATAAGAGCC                   <  SRR4302540.6131510/94‑1 (MQ=60)

                                                                            AATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCC                  <  SRR4302540.2162868/94‑1 (MQ=60)

                                                                             ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCC                 >  SRR4302540.9376421/1‑94 (MQ=60)

                                                                             ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCC                 >  SRR4302540.497750/1‑94 (MQ=60)

                                                                             ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCAC                 >  SRR4302540.9442607/1‑94 (MQ=60)

                                                                             ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGGTACCAGGGGCTGGAGAAAATACATAAGAGCCCC                 >  SRR4302540.2226778/1‑94 (MQ=60)

                                                                               TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT               <  SRR4302540.4231374/94‑1 (MQ=60)

                                                                               TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT               <  SRR4302540.7072417/94‑1 (MQ=60)

                                                                                CATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              <  SRR4302540.9669741/94‑1 (MQ=60)

                                                                                CATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              <  SRR4302540.1178343/94‑1 (MQ=60)

                                                                                CATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              >  SRR4302540.2625739/1‑94 (MQ=60)

                                                                                CATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              >  SRR4302540.5186642/1‑94 (MQ=60)

                                                                                 ATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCACCTTTC             >  SRR4302540.1857517/1‑94 (MQ=60)

                                                                                  TGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCA            <  SRR4302540.9297877/94‑1 (MQ=60)

                                                                                  TGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCA            <  SRR4302540.7987606/94‑1 (MQ=60)

                                                                                   GCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCAC           <  SRR4302540.6909193/94‑1 (MQ=60)

                                                                                   GCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCAC           >  SRR4302540.2717304/1‑94 (MQ=60)

                                                                                    CGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACT          <  SRR4302540.7682219/94‑1 (MQ=60)

                                                                                     GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         >  SRR4302540.390785/1‑94 (MQ=60)

                                                                                     GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         <  SRR4302540.6310346/94‑1 (MQ=60)

                                                                                     GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         >  SRR4302540.7492758/1‑94 (MQ=60)

                                                                                     GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         <  SRR4302540.778142/94‑1 (MQ=60)

                                                                                     GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         >  SRR4302540.3151676/1‑94 (MQ=60)

                                                                                     CTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         <  SRR4302540.2319273/94‑1 (MQ=60)

                                                                                      TCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG        <  SRR4302540.3351106/94‑1 (MQ=60)

                                                                                      TCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG        <  SRR4302540.8086306/94‑1 (MQ=60)

                                                                                       CGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGC       >  SRR4302540.7720428/1‑94 (MQ=60)

                                                                                        GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      <  SRR4302540.8359794/94‑1 (MQ=60)

                                                                                        GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      >  SRR4302540.7030072/1‑94 (MQ=60)

                                                                                        GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      >  SRR4302540.8963954/1‑94 (MQ=60)

                                                                                        GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      >  SRR4302540.635206/1‑94 (MQ=60)

                                                                                        GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      >  SRR4302540.8100719/1‑94 (MQ=60)

                                                                                         CCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATTCATAAGAGCCCCTTGCCCTGGCAG     >  SRR4302540.1482728/1‑94 (MQ=60)

                                                                                         CCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAG     <  SRR4302540.9193196/94‑1 (MQ=60)

                                                                                         CCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAG     >  SRR4302540.2508063/1‑94 (MQ=60)

                                                                                          CCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGG    <  SRR4302540.8197089/94‑1 (MQ=60)

                                                                                          CCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTCCACTGGCAGG    >  SRR4302540.9799712/1‑94 (MQ=60)

                                                                                           CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA   >  SRR4302540.3627193/1‑94 (MQ=60)

                                                                                           CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA   >  SRR4302540.5348617/1‑94 (MQ=60)

                                                                                           CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA   <  SRR4302540.7378362/94‑1 (MQ=60)

                                                                                           CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA   >  SRR4302540.6029224/1‑94 (MQ=60)

                                                                                            CAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATACGAGCCCCTTGCACTGGCAGGAA  <  SRR4302540.1861452/94‑1 (MQ=60)

AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA  >  NC_000913/4572634‑4572819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`