Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,575,878	A→G	Y344H (TAT→CAT)	mcrB ←	McrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,575,878	0	A	G	99.4%	1565.3 / ‑4.1	478	Y344H (TAT→CAT)	mcrB	McrB
Reads supporting (aligned to +/- strand): ref base A (0/3); new base G (200/275); total (200/278)
Fisher's exact test for biased strand distribution p-value = 2.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 494 total aligned reads displayed.

CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTT  >  NC_000913/4575788‑4575967

cTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGt                                                                                          <  2:7252938/93‑1 (MQ=255)

      ttttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTcaacaa                                                                                    >  1:4352787/1‑93 (MQ=255)

        ttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACg                                                                                  <  1:9602858/93‑1 (MQ=255)

        ttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACg                                                                                  <  1:5752737/93‑1 (MQ=255)

          aTTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGc                                                                                <  2:2877387/93‑1 (MQ=255)

           ttCAGTAAAAAATGCCGGAACTGTGGTGTATCAAACGCTGGCTCAGTATCTATGAAAGAAAATCGTCTGCGTAGAACATGGTCAACAACGGcc                                                                               <  2:1215952/93‑1 (MQ=255)

            tCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCa                                                                              <  1:7154293/93‑1 (MQ=255)

            tCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCa                                                                              <  1:5251563/93‑1 (MQ=255)

             cAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCag                                                                             >  1:1036743/1‑93 (MQ=255)

              aGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCaga                                                                            <  2:7407781/93‑1 (MQ=255)

              aGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCaga                                                                            <  2:3600935/93‑1 (MQ=255)

              aGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCaga                                                                            >  2:1688589/1‑93 (MQ=255)

              aGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCaga                                                                            <  1:7271083/93‑1 (MQ=255)

               gTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagag                                                                           >  2:9687385/1‑93 (MQ=255)

               gTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagag                                                                           <  1:5282384/93‑1 (MQ=255)

                tAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagaga                                                                          >  1:4062208/1‑93 (MQ=255)

                 aaaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagagag                                                                         <  1:8857373/93‑1 (MQ=255)

                  aaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCCACAACGGCCAGAGAGc                                                                        >  2:2032471/1‑93 (MQ=255)

                   aaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCg                                                                       >  2:9500246/1‑93 (MQ=255)

                   aaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCg                                                                       >  2:2587362/1‑93 (MQ=255)

                    aaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGa                                                                      >  1:8140437/1‑93 (MQ=255)

                     aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt                                                                     >  1:8023587/1‑93 (MQ=255)

                     aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt                                                                     <  1:4128796/93‑1 (MQ=255)

                     aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt                                                                     <  2:6672399/93‑1 (MQ=255)

                      aTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATc                                                                    <  2:1921375/93‑1 (MQ=255)

                       ttCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCg                                                                   <  1:6888672/93‑1 (MQ=255)

                       ttCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCg                                                                   >  1:5807102/1‑93 (MQ=255)

                        tCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGTGATCgg                                                                  <  1:6618943/93‑1 (MQ=255)

                         ccGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGc                                                                 >  1:9169974/1‑93 (MQ=255)

                          cGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCa                                                                >  1:10006512/1‑93 (MQ=255)

                          cGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCa                                                                <  1:5354431/93‑1 (MQ=255)

                          cGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCa                                                                <  1:238002/93‑1 (MQ=255)

                           ggAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAg                                                               >  1:2091902/1‑93 (MQ=255)

                            gAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGt                                                              >  2:6438184/1‑93 (MQ=255)

                            gAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGt                                                              >  1:8173565/1‑93 (MQ=255)

                               cTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAtt                                                           <  1:120627/93‑1 (MQ=255)

                                tgtgGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTc                                                          >  2:4269399/1‑93 (MQ=255)

                                 gtggtgTATCAAACCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCa                                                         <  1:6340631/93‑1 (MQ=255)

                                 gtggtgTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCa                                                         >  2:6168859/1‑93 (MQ=255)

                                  tggtgTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑t                                                       <  2:2386972/93‑1 (MQ=255)

                                  tggtgTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑t                                                       <  1:7902718/93‑1 (MQ=255)

                                   ggtgTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGTAGTATTCA‑tt                                                      <  2:9333655/93‑1 (MQ=255)

                                   ggtgTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑tt                                                      <  1:8477766/93‑1 (MQ=255)

                                    gtgtATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTa                                                     <  2:5127734/93‑1 (MQ=255)

                                    gtgtATCAAAACCTGGCTCAATATCTATGAAAAAAAAACGTCTGCGTAGGGGATGGGCAACAACGGCCAGAGAGAGATCGGCAGTATTCA‑TTa                                                     >  2:6769939/1‑93 (MQ=255)

                                     tgtATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTaa                                                    >  2:1069786/1‑93 (MQ=255)

                                      gtATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTaaa                                                   <  2:1434028/93‑1 (MQ=255)

                                       tATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAAc                                                  <  1:4717249/93‑1 (MQ=255)

                                       tATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAAc                                                  <  1:4577271/93‑1 (MQ=255)

                                       tATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAAc                                                  >  2:135514/1‑93 (MQ=255)

                                        aTCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAAcc                                                 <  2:417353/93‑1 (MQ=255)

                                         tCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCg                                                >  1:3964229/1‑93 (MQ=255)

                                         tCAAAACCTGGCTCAATATCTATGAAAAAAAAAAGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGGATTCATTTAAAcc                                                 >  2:3081284/1‑93 (MQ=255)

                                           aaaaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCgat                                              >  1:8656981/1‑93 (MQ=255)

                                            aaaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCgatg                                             <  2:5725471/93‑1 (MQ=255)

                                            aaaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCAATCGGCAGTATTCA‑TTAAACCgatg                                             <  1:5660561/93‑1 (MQ=255)

                                             aaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCgatga                                            <  1:187457/93‑1 (MQ=255)

                                                 tGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGAtata                                        <  1:9511509/93‑1 (MQ=255)

                                                 tGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGAtata                                        <  1:6233909/93‑1 (MQ=255)

                                                 tGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGAtata                                        <  2:8644221/93‑1 (MQ=255)

                                                 tGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGAtata                                        >  2:8881909/1‑93 (MQ=255)

                                                 tGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGAtata                                        <  1:4786621/93‑1 (MQ=255)

                                                  ggCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATaa                                       >  1:1696289/1‑93 (MQ=255)

                                                   gCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATaaa                                      <  1:763658/93‑1 (MQ=255)

                                                        atatCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATtc                                 <  1:2460711/93‑1 (MQ=255)

                                                        atatCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATtc                                 <  2:802635/93‑1 (MQ=255)

                                                          atCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATtctc                               >  1:1120379/1‑93 (MQ=255)

                                                          atCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATtctc                               <  2:8090840/93‑1 (MQ=255)

                                                          atCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATtctc                               <  1:2011218/93‑1 (MQ=255)

                                                           tCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTcc                              >  2:8274142/1‑93 (MQ=255)

                                                            cTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCg                             <  2:7558269/93‑1 (MQ=255)

                                                            cTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCg                             >  1:1479334/1‑93 (MQ=255)

                                                            cTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCg                             <  1:934502/93‑1 (MQ=255)

                                                            cTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCg                             <  1:5953445/93‑1 (MQ=255)

                                                             tATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCgg                            >  2:3826353/1‑93 (MQ=255)

                                                               tGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGa                          <  2:4467278/93‑1 (MQ=255)

                                                               tGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGa                          >  2:4920872/1‑93 (MQ=255)

                                                                gaaagaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGAc                         <  2:9033255/93‑1 (MQ=255)

                                                                  aagaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACAt                       >  1:2695093/1‑93 (MQ=255)

                                                                    gaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAg                     >  1:3467455/1‑93 (MQ=255)

                                                                     aaaaTCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGa                    <  1:3825362/93‑1 (MQ=255)

                                                                      aaaTCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGaa                   <  1:3700872/93‑1 (MQ=255)

                                                                         tCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCg                <  2:5456287/93‑1 (MQ=255)

                                                                         tCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCg                <  1:4866337/93‑1 (MQ=255)

                                                                         tCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCg                <  1:2859839/93‑1 (MQ=255)

                                                                         tCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCg                <  1:5516349/93‑1 (MQ=255)

                                                                           gTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGtt              <  2:335478/93‑1 (MQ=255)

                                                                            tCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttc             <  1:6712257/93‑1 (MQ=255)

                                                                              tGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttctt           >  1:3226759/1‑93 (MQ=255)

                                                                              tGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttctt           <  1:7756548/93‑1 (MQ=255)

                                                                              tGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttctt           >  2:4706389/1‑93 (MQ=255)

                                                                               gCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttcttc          <  2:7066400/93‑1 (MQ=255)

                                                                                ggTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCa         <  2:7500782/92‑1 (MQ=255)

                                                                                  tAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATc       >  1:7006492/1‑93 (MQ=255)

                                                                                   aGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCg      >  1:1322378/1‑93 (MQ=255)

                                                                                     ggCATGGTCAACAACGGCCAGAGAGCGATCGGGAGTATTCA‑TTAAAACGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGtt    >  2:595035/1‑93 (MQ=255)

                                                                                     ggCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGtt    >  2:6540218/1‑93 (MQ=255)

                                                                                     ggCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGtt    >  2:5324357/1‑93 (MQ=255)

                                                                                       cATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGtttt  <  1:2220423/93‑1 (MQ=255)

                                                                                       cATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGtttt  <  1:160819/93‑1 (MQ=255)

CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA‑TTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTT  >  NC_000913/4575788‑4575967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 300 total aligned reads displayed.

GTTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCGGA  >  NC_000913/4575785‑4575971

GTTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATG                                                                                               <  SRR4302540.8136270/94‑1 (MQ=60)

 TTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGG                                                                                              >  SRR4302540.9131217/1‑94 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            <  SRR4302540.1799603/94‑1 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            >  SRR4302540.7155257/1‑94 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            <  SRR4302540.3965764/94‑1 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            <  SRR4302540.2020850/94‑1 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            >  SRR4302540.7022086/1‑94 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            >  SRR4302540.6793459/1‑94 (MQ=60)

   CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC                                                                                            <  SRR4302540.8540299/94‑1 (MQ=60)

       TTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACA                                                                                        <  SRR4302540.2408539/94‑1 (MQ=60)

        TTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAA                                                                                       >  SRR4302540.4400134/1‑94 (MQ=60)

        TTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAA                                                                                       <  SRR4302540.2510546/94‑1 (MQ=60)

         TTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAAC                                                                                      <  SRR4302540.5315629/94‑1 (MQ=60)

         TTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAAC                                                                                      >  SRR4302540.9628147/1‑94 (MQ=60)

         TTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAAC                                                                                      <  SRR4302540.7916038/94‑1 (MQ=60)

           TTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGG                                                                                    <  SRR4302540.5816229/94‑1 (MQ=60)

           TTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGG                                                                                    >  SRR4302540.2146199/1‑94 (MQ=60)

           TTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGG                                                                                    <  SRR4302540.9321592/94‑1 (MQ=60)

            TATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGC                                                                                   >  SRR4302540.7170212/1‑94 (MQ=60)

             ATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCC                                                                                  >  SRR4302540.6135097/1‑94 (MQ=60)

              TTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCA                                                                                 <  SRR4302540.2903264/94‑1 (MQ=60)

              TTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCA                                                                                 <  SRR4302540.4228242/94‑1 (MQ=60)

              TTCAGTAAAAAATTCCGGAACTGTCGTTTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCA                                                                                 <  SRR4302540.5480623/94‑1 (MQ=60)

               TCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAG                                                                                >  SRR4302540.1047285/1‑94 (MQ=60)

               TCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAG                                                                                >  SRR4302540.5960869/1‑94 (MQ=60)

               TCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAG                                                                                <  SRR4302540.4703755/94‑1 (MQ=60)

               TCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAG                                                                                <  SRR4302540.7234027/94‑1 (MQ=60)

                 AGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG                                                                              <  SRR4302540.8265046/94‑1 (MQ=60)

                 AGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG                                                                              <  SRR4302540.4670123/94‑1 (MQ=60)

                 AGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG                                                                              <  SRR4302540.2321075/94‑1 (MQ=60)

                 AGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG                                                                              <  SRR4302540.4235504/94‑1 (MQ=60)

                 AGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG                                                                              <  SRR4302540.7352216/94‑1 (MQ=60)

                  GTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGA                                                                             <  SRR4302540.5340093/94‑1 (MQ=60)

                  GTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGA                                                                             >  SRR4302540.219123/1‑94 (MQ=60)

                  GTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGA                                                                             <  SRR4302540.2246977/94‑1 (MQ=60)

                   TAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAG                                                                            <  SRR4302540.5807621/94‑1 (MQ=60)

                   TAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAG                                                                            <  SRR4302540.7792565/94‑1 (MQ=60)

                   TAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAG                                                                            <  SRR4302540.8640451/94‑1 (MQ=60)

                    AAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGC                                                                           <  SRR4302540.8959860/94‑1 (MQ=60)

                    AAAAAATNCCGGAACTGTGGTNTNTCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGC                                                                           <  SRR4302540.4905992/94‑1 (MQ=60)

                     AAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCG                                                                          <  SRR4302540.5393492/94‑1 (MQ=60)

                       AAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAT                                                                        >  SRR4302540.8116900/1‑94 (MQ=60)

                       AAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAT                                                                        <  SRR4302540.141959/94‑1 (MQ=60)

                        AATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATC                                                                       <  SRR4302540.5368526/94‑1 (MQ=60)

                        AATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATC                                                                       <  SRR4302540.6980731/94‑1 (MQ=60)

                        AATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATC                                                                       <  SRR4302540.4337684/94‑1 (MQ=60)

                         ATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCG                                                                      >  SRR4302540.5554059/1‑94 (MQ=60)

                         ATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCG                                                                      >  SRR4302540.10015694/1‑94 (MQ=60)

                         ATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCG                                                                      >  SRR4302540.5871270/1‑94 (MQ=60)

                          TTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGG                                                                     <  SRR4302540.6965059/94‑1 (MQ=60)

                           TCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGTGATCGGC                                                                    <  SRR4302540.6692237/94‑1 (MQ=60)

                           TCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGC                                                                    <  SRR4302540.4785299/94‑1 (MQ=60)

                           TCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGC                                                                    >  SRR4302540.247125/1‑94 (MQ=60)

                           TCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGC                                                                    >  SRR4302540.9279977/1‑94 (MQ=60)

                            CCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCA                                                                   <  SRR4302540.7999656/94‑1 (MQ=60)

                            CCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCA                                                                   >  SRR4302540.10123052/1‑94 (MQ=60)

                             CGGAACTGTGGTGTATCAAATCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAG                                                                  <  SRR4302540.6094297/94‑1 (MQ=60)

                             CGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAG                                                                  >  SRR4302540.2114365/1‑94 (MQ=60)

                             CGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAG                                                                  <  SRR4302540.5413226/94‑1 (MQ=60)

                             CGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAG                                                                  <  SRR4302540.1667857/94‑1 (MQ=60)

                             CGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGGAGGGCATGGTCAACCACGGCCAGAGAGCGATCGGCAG                                                                  >  SRR4302540.7351760/1‑94 (MQ=60)

                              GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTGAACAACGGCCAGAGAGCGATCGGCAGT                                                                 >  SRR4302540.8132203/1‑94 (MQ=60)

                              GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT                                                                 >  SRR4302540.4495402/1‑94 (MQ=60)

                              GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT                                                                 <  SRR4302540.1112936/94‑1 (MQ=60)

                              GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT                                                                 >  SRR4302540.8268509/1‑94 (MQ=60)

                              GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT                                                                 >  SRR4302540.1952133/1‑94 (MQ=60)

                               GAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTA                                                                >  SRR4302540.4029225/1‑94 (MQ=60)

                                AACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAT                                                               <  SRR4302540.5707316/94‑1 (MQ=60)

                                AACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAT                                                               <  SRR4302540.4404524/94‑1 (MQ=60)

                                AACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAT                                                               >  SRR4302540.1351437/1‑94 (MQ=60)

                                AACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAT                                                               >  SRR4302540.150956/1‑94 (MQ=60)

                                AACTGTGGTGTATCAAAACCTGGCTAAATATCTATGAAAGAAAATCGTCTGCGCAGGGCATGGTCAACAACGACCAGAGCGCGATCGGCAGTAT                                                               >  SRR4302540.1618994/1‑94 (MQ=60)

                                 ACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATT                                                              >  SRR4302540.6559257/1‑94 (MQ=60)

                                  CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGTCAGAGAGCGATCGGCAGTATTC                                                             >  SRR4302540.2047218/1‑94 (MQ=60)

                                  CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTC                                                             <  SRR4302540.9343252/94‑1 (MQ=60)

                                  CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTC                                                             <  SRR4302540.9834106/94‑1 (MQ=60)

                                  CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTC                                                             >  SRR4302540.1066529/1‑94 (MQ=60)

                                  CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTC                                                             >  SRR4302540.2375734/1‑94 (MQ=60)

                                  CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTC                                                             <  SRR4302540.121922/94‑1 (MQ=60)

                                   TGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA                                                            <  SRR4302540.674634/94‑1 (MQ=60)

                                    GTGGTGTATCAAACCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCAT                                                           <  SRR4302540.6411245/94‑1 (MQ=60)

                                    GTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCAT                                                           <  SRR4302540.3676292/94‑1 (MQ=60)

                                      GGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTA                                                         <  SRR4302540.7790223/94‑1 (MQ=60)

                                      GGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTA                                                         <  SRR4302540.63187/94‑1 (MQ=60)

                                      GGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTA                                                         <  SRR4302540.8201317/94‑1 (MQ=60)

                                      GGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTA                                                         <  SRR4302540.8576233/94‑1 (MQ=60)

                                      GGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTAAACAACGGCCAGAGAGCGATCGGCAGTATTCATTA                                                         <  SRR4302540.3833709/94‑1 (MQ=60)

                                       GTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAA                                                        >  SRR4302540.6040052/1‑94 (MQ=60)

                                       GTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAA                                                        >  SRR4302540.1022090/1‑94 (MQ=60)

                                       GTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAA                                                        <  SRR4302540.8347850/94‑1 (MQ=60)

                                         GTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAC                                                      <  SRR4302540.4772092/94‑1 (MQ=60)

                                          TATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACC                                                     >  SRR4302540.8812825/1‑94 (MQ=60)

                                          TATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACC                                                     <  SRR4302540.4626638/94‑1 (MQ=60)

                                           ATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCG                                                    >  SRR4302540.3259637/1‑94 (MQ=60)

                                           ATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCG                                                    >  SRR4302540.3259638/1‑94 (MQ=60)

                                           ATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCG                                                    <  SRR4302540.1187946/94‑1 (MQ=60)

                                           ATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCG                                                    >  SRR4302540.4006974/1‑94 (MQ=60)

                                             CAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGAT                                                  <  SRR4302540.7924598/94‑1 (MQ=60)

                                              AAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATG                                                 <  SRR4302540.3432545/94‑1 (MQ=60)

                                              AAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATG                                                 >  SRR4302540.9647849/1‑94 (MQ=60)

                                               AAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCAATCGGCAGTATTCATTAAACCGATGA                                                <  SRR4302540.5722886/94‑1 (MQ=60)

                                                AACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGAT                                               <  SRR4302540.5105133/94‑1 (MQ=60)

                                                AACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGAT                                               <  SRR4302540.8255928/94‑1 (MQ=60)

                                                AACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGAT                                               <  SRR4302540.189319/94‑1 (MQ=60)

                                                AACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGAT                                               <  SRR4302540.8915504/94‑1 (MQ=60)

                                                 ACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATA                                              >  SRR4302540.1417487/1‑94 (MQ=60)

                                                 ACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATA                                              >  SRR4302540.1018933/1‑94 (MQ=60)

                                                  CCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATAT                                             >  SRR4302540.7888436/1‑94 (MQ=60)

                                                   CTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATA                                            >  SRR4302540.3888552/1‑94 (MQ=60)

                                                    TGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAA                                           >  SRR4302540.1714667/1‑94 (MQ=60)

                                                    TGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAA                                           <  SRR4302540.4155987/94‑1 (MQ=60)

                                                    TGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAA                                           <  SRR4302540.4155986/94‑1 (MQ=60)

                                                    TGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAA                                           <  SRR4302540.4837798/94‑1 (MQ=60)

                                                     GGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGGTATAAA                                          <  SRR4302540.8251302/94‑1 (MQ=60)

                                                      GCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAC                                         <  SRR4302540.6949486/94‑1 (MQ=60)

                                                      GCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAC                                         <  SRR4302540.771787/94‑1 (MQ=60)

                                                      GCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAC                                         <  SRR4302540.8870142/94‑1 (MQ=60)

                                                       CTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACA                                        >  SRR4302540.6663941/1‑94 (MQ=60)

                                                       CTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACA                                        >  SRR4302540.1116559/1‑94 (MQ=60)

                                                       CTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACA                                        <  SRR4302540.9702703/94‑1 (MQ=60)

                                                       CTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGACAGAGAGCGATCGGCAGTATTCATTAAACCGCTGATATAAACA                                        >  SRR4302540.1006850/1‑94 (MQ=60)

                                                        TCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACAT                                       >  SRR4302540.5988187/1‑94 (MQ=60)

                                                        TCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACAT                                       >  SRR4302540.5237771/1‑94 (MQ=60)

                                                        TCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACAT                                       <  SRR4302540.2045801/94‑1 (MQ=60)

                                                         CAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATT                                      >  SRR4302540.283394/1‑94 (MQ=60)

                                                         CAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATT                                      >  SRR4302540.5316434/1‑94 (MQ=60)

                                                          AATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCATAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTC                                     <  SRR4302540.199671/94‑1 (MQ=60)

                                                          AATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGGGATCGGCAGAATTCATTAAACCGATGATAAAAAAATTC                                     >  SRR4302540.5725434/1‑94 (MQ=60)

                                                          AATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTC                                     <  SRR4302540.5817202/94‑1 (MQ=60)

                                                           ATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCT                                    <  SRR4302540.5721906/94‑1 (MQ=60)

                                                           ATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCT                                    <  SRR4302540.2487199/94‑1 (MQ=60)

                                                            TATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTC                                   >  SRR4302540.4067478/1‑94 (MQ=60)

                                                            TATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTC                                   >  SRR4302540.1132006/1‑94 (MQ=60)

                                                             ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGCTCGGCAGTATTCATTAAACCGATGATATAAACATTCTCC                                  >  SRR4302540.7529188/1‑94 (MQ=60)

                                                             ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCC                                  >  SRR4302540.2431160/1‑94 (MQ=60)

                                                             ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCC                                  >  SRR4302540.9528774/1‑94 (MQ=60)

                                                             ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCC                                  <  SRR4302540.630873/94‑1 (MQ=60)

                                                             ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCAGCAGTATTCATTAAACCGATGATATAAACATTCTCC                                  <  SRR4302540.1164279/94‑1 (MQ=60)

                                                              TCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCG                                 <  SRR4302540.10045934/94‑1 (MQ=60)

                                                              TCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCG                                 <  SRR4302540.1588824/94‑1 (MQ=60)

                                                              TCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCG                                 <  SRR4302540.412881/94‑1 (MQ=60)

                                                               CTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGG                                <  SRR4302540.2793012/94‑1 (MQ=60)

                                                               CTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGG                                <  SRR4302540.944301/94‑1 (MQ=60)

                                                               CTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGG                                <  SRR4302540.6019287/94‑1 (MQ=60)

                                                               CTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGG                                <  SRR4302540.7482429/94‑1 (MQ=60)

                                                                TATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGG                               <  SRR4302540.2629397/94‑1 (MQ=60)

                                                                TATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGG                               >  SRR4302540.807497/1‑94 (MQ=60)

                                                                TATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGG                               <  SRR4302540.5644528/94‑1 (MQ=60)

                                                                  TGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGAC                             >  SRR4302540.4869314/1‑94 (MQ=60)

                                                                  TGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGAC                             >  SRR4302540.1251791/1‑94 (MQ=60)

                                                                  TGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGAC                             <  SRR4302540.8587268/94‑1 (MQ=60)

                                                                  TGAAAGAAAATCGTCTGCGTAGGGCATGGGCAACAACGGCCAGAGAGCGATCGGCAGTATTCATGAAAACGATGATATAAACATTCTCCGGGAC                             >  SRR4302540.1251790/1‑94 (MQ=60)

                                                                   GAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACA                            >  SRR4302540.5844272/1‑94 (MQ=60)

                                                                    AAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACAT                           >  SRR4302540.2724191/1‑94 (MQ=60)

                                                                     ACGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATA                          <  SRR4302540.532689/94‑1 (MQ=60)

                                                                     AAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATA                          <  SRR4302540.8049055/94‑1 (MQ=60)

                                                                      AGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAG                         >  SRR4302540.3853971/1‑94 (MQ=60)

                                                                      AGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAG                         <  SRR4302540.6743605/94‑1 (MQ=60)

                                                                      AGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAG                         >  SRR4302540.3505207/1‑94 (MQ=60)

                                                                       GAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGA                        >  SRR4302540.3370749/1‑94 (MQ=60)

                                                                       GAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGA                        <  SRR4302540.3535633/94‑1 (MQ=60)

                                                                        AAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAA                       <  SRR4302540.4751362/94‑1 (MQ=60)

                                                                        AAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAA                       <  SRR4302540.3866991/94‑1 (MQ=60)

                                                                         AAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAAT                      <  SRR4302540.9270569/94‑1 (MQ=60)

                                                                          AATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATC                     <  SRR4302540.4829661/94‑1 (MQ=60)

                                                                          AATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATC                     >  SRR4302540.8204703/1‑94 (MQ=60)

                                                                           ATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCG                    <  SRR4302540.519909/94‑1 (MQ=60)

                                                                           ATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCG                    <  SRR4302540.9599164/94‑1 (MQ=60)

                                                                            TCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGT                   <  SRR4302540.4918525/94‑1 (MQ=60)

                                                                            TCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGT                   <  SRR4302540.4918526/94‑1 (MQ=60)

                                                                            TCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGT                   <  SRR4302540.1682982/94‑1 (MQ=60)

                                                                             CGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTT                  <  SRR4302540.3595563/94‑1 (MQ=60)

                                                                             CGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTT                  <  SRR4302540.2079857/94‑1 (MQ=60)

                                                                              GTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTC                 <  SRR4302540.7570608/94‑1 (MQ=60)

                                                                              GTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTC                 <  SRR4302540.1718874/94‑1 (MQ=60)

                                                                              GTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTC                 <  SRR4302540.1772830/94‑1 (MQ=60)

                                                                               TCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCT                <  SRR4302540.6786326/94‑1 (MQ=60)

                                                                               TCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCT                <  SRR4302540.6786327/94‑1 (MQ=60)

                                                                               GCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCT                <  SRR4302540.2820381/94‑1 (MQ=60)

                                                                                 TGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTC              <  SRR4302540.7847174/94‑1 (MQ=60)

                                                                                    GTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATC           <  SRR4302540.663611/94‑1 (MQ=60)

                                                                                    GTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATC           >  SRR4302540.6343116/1‑94 (MQ=60)

                                                                                    GTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATC           >  SRR4302540.7084254/1‑94 (MQ=60)

                                                                                     TAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCG          >  SRR4302540.1336157/1‑94 (MQ=60)

                                                                                     TAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCG          <  SRR4302540.3842072/94‑1 (MQ=60)

                                                                                       GGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTT        >  SRR4302540.555199/1‑94 (MQ=60)

                                                                                       GGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTT        <  SRR4302540.7280230/94‑1 (MQ=60)

                                                                                       GGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTT        <  SRR4302540.4076490/94‑1 (MQ=60)

                                                                                        GGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTT       <  SRR4302540.9494524/94‑1 (MQ=60)

                                                                                        GGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTT       >  SRR4302540.9225858/1‑94 (MQ=60)

                                                                                          CATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC     <  SRR4302540.2244366/94‑1 (MQ=60)

                                                                                          CATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC     <  SRR4302540.162439/94‑1 (MQ=60)

                                                                                           ATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCG    >  SRR4302540.843046/1‑94 (MQ=60)

                                                                                           ATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCG    >  SRR4302540.725266/1‑94 (MQ=60)

                                                                                           ATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCG    >  SRR4302540.2966176/1‑94 (MQ=60)

                                                                                           ATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCG    <  SRR4302540.9757908/94‑1 (MQ=60)

                                                                                           ATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCG    <  SRR4302540.7272106/94‑1 (MQ=60)

                                                                                             GGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCGGA  >  SRR4302540.4127900/1‑94 (MQ=60)

                                                                                             GGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCGGA  >  SRR4302540.5052836/1‑94 (MQ=60)

                                                                                             GGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCGGA  >  SRR4302540.970100/1‑94 (MQ=60)

GTTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTCGGA  >  NC_000913/4575785‑4575971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`