Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,575,878 |
A→G |
Y344H (TAT→CAT) |
mcrB ← |
McrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,575,878 | 0 | A | G | 100.0%
| 657.8
/ NA
| 200 | Y344H (TAT→CAT) | mcrB | McrB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (76/124); total (76/124) |
Only 100 of 202 total aligned reads displayed.
CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTT > NC_000913/4575788‑4575967
|
tGCTTTTTTATTCAGTAAAAAATTCCGGAACTCTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTc > 2:768646/1‑93 (MQ=255)
cTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTcaa < 1:5125800/93‑1 (MQ=255)
ttttttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTcaac < 2:2597737/93‑1 (MQ=255)
tttttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTcaaca > 2:3683557/1‑93 (MQ=255)
tttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCaacaac < 1:3347662/93‑1 (MQ=255)
tttATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCaacaac < 1:5875754/93‑1 (MQ=255)
aTTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGc > 2:4618175/1‑93 (MQ=255)
ttCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGcc > 1:1773658/1‑93 (MQ=255)
tCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCa > 1:1950061/1‑93 (MQ=255)
tCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCa > 1:4788846/1‑93 (MQ=255)
tCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCa < 1:3221419/93‑1 (MQ=255)
aGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCaga > 2:2986270/1‑93 (MQ=255)
aGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCaga > 2:3600040/1‑93 (MQ=255)
tAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagaga < 1:6262730/93‑1 (MQ=255)
aaaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagagag < 1:3270708/93‑1 (MQ=255)
aaaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagagag < 1:3066404/93‑1 (MQ=255)
aaaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagagag < 1:3469751/93‑1 (MQ=255)
aaaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagagag > 1:5152566/1‑93 (MQ=255)
aaaaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAACATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCagagag < 1:1878021/93‑1 (MQ=255)
aaaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCg < 2:5837284/93‑1 (MQ=255)
aaaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGa < 2:4516032/93‑1 (MQ=255)
aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt < 2:3565012/93‑1 (MQ=255)
aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt > 2:2214843/1‑93 (MQ=255)
aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt < 2:2889502/93‑1 (MQ=255)
aaTTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGAt < 1:1319299/93‑1 (MQ=255)
agtCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATc < 2:1674076/91‑1 (MQ=255)
ttCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCg > 2:1195625/1‑93 (MQ=255)
ttCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCg > 1:4739868/1‑93 (MQ=255)
tCCGGAACTGTGGTGTATCAAACCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCgg < 2:1712448/93‑1 (MQ=255)
tCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCgg < 2:1505568/93‑1 (MQ=255)
ccGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGc > 2:4418059/1‑93 (MQ=255)
ccGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGc > 1:2354859/1‑93 (MQ=255)
ccGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCAGGGTCAACAACGGCCAGAGAGCGATCGGc < 2:3788639/93‑1 (MQ=255)
ggAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAg < 1:1085127/93‑1 (MQ=255)
ggAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAg > 1:3406882/1‑93 (MQ=255)
gAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGt > 1:4006868/1‑93 (MQ=255)
gAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGt > 1:2636225/1‑93 (MQ=255)
gAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGt > 2:6178477/1‑93 (MQ=255)
aaCTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTa < 2:4244966/93‑1 (MQ=255)
aCTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAt > 2:3441812/1‑93 (MQ=255)
aCTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAt < 1:3916906/93‑1 (MQ=255)
cTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAtt < 1:4701165/93‑1 (MQ=255)
cTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAtt > 2:3126306/1‑93 (MQ=255)
cTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAtt > 1:6035778/1‑93 (MQ=255)
tgtgGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTc < 1:4572793/93‑1 (MQ=255)
tgtgGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTc < 2:2431867/93‑1 (MQ=255)
gtggtgTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCa < 2:2943600/93‑1 (MQ=255)
tgtATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTaa > 2:2833804/1‑93 (MQ=255)
gtATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTaaa > 1:2414487/1‑93 (MQ=255)
tATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAc < 2:5015272/93‑1 (MQ=255)
tATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAc < 2:3714789/93‑1 (MQ=255)
tATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAc > 1:3777405/1‑93 (MQ=255)
aTCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAcc > 1:581900/1‑93 (MQ=255)
aaaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCgatg < 1:1613483/93‑1 (MQ=255)
aaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCgatga < 1:1544511/93‑1 (MQ=255)
aaCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCgatga < 2:3589330/93‑1 (MQ=255)
ccTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGata > 2:2368738/1‑93 (MQ=255)
cTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGatat < 2:5093752/93‑1 (MQ=255)
cTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGatat < 1:5641500/93‑1 (MQ=255)
cTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGGATTCATTAAACCGATGatat > 2:1756462/1‑93 (MQ=255)
tGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGAtata < 2:6236780/93‑1 (MQ=255)
gCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATaaa > 2:4952013/1‑93 (MQ=255)
gCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATaaa < 1:2723543/93‑1 (MQ=255)
gCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATaaa < 1:2869655/93‑1 (MQ=255)
gCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATaaa < 2:5502866/93‑1 (MQ=255)
cTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAc < 2:6222101/93‑1 (MQ=255)
tCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACa > 2:5241539/1‑93 (MQ=255)
tCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACa < 2:4645042/93‑1 (MQ=255)
cAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACAt > 2:3066962/1‑93 (MQ=255)
atCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATtctc > 2:678205/1‑93 (MQ=255)
tCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTcc > 1:1115520/1‑93 (MQ=255)
tCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTcc < 2:3257014/93‑1 (MQ=255)
tCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACAGATGATATAAACATTCTcc > 1:3487236/1‑93 (MQ=255)
cTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCg < 2:1443480/93‑1 (MQ=255)
cTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCg < 1:6111324/93‑1 (MQ=255)
tATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCgg > 2:605578/1‑93 (MQ=255)
tATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCgg < 1:5483731/93‑1 (MQ=255)
tATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCgg > 2:5338185/1‑93 (MQ=255)
tGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGa < 1:2667168/93‑1 (MQ=255)
gaaaaaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCCCCGGGAc < 2:557569/93‑1 (MQ=255)
aaagaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACa > 1:6143015/1‑93 (MQ=255)
aagaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACAt < 1:3434693/93‑1 (MQ=255)
agaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATa < 1:4611884/93‑1 (MQ=255)
gaaaATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAg < 2:3993270/93‑1 (MQ=255)
aaaTCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGaa > 1:4055623/1‑93 (MQ=255)
aaTCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAAt < 2:1589905/93‑1 (MQ=255)
aaTCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAAt < 2:5519196/93‑1 (MQ=255)
tCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttc > 1:5220890/1‑93 (MQ=255)
tCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttc < 2:1242082/93‑1 (MQ=255)
tCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttc < 1:2004723/93‑1 (MQ=255)
tGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAATCGATGATATAAACATTCTCCGGGACATAGAATCGttctt > 1:3507309/1‑93 (MQ=255)
gCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGttcttc > 2:1051616/1‑93 (MQ=255)
cGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCa < 2:5777100/93‑1 (MQ=255)
cGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCa < 1:2238223/93‑1 (MQ=255)
gTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCAt < 1:4996315/93‑1 (MQ=255)
gTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCAt < 1:73775/93‑1 (MQ=255)
tAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATc > 1:2300992/1‑93 (MQ=255)
aGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCg < 2:4395453/93‑1 (MQ=255)
gggCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGt > 1:4140760/1‑93 (MQ=255)
ggCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGtt < 1:5454534/93‑1 (MQ=255)
|
CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTT > NC_000913/4575788‑4575967
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC > NC_000913/4575786‑4575968
|
TTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGG < SRR4302533.2100638/94‑1 (MQ=60)
TTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGG < SRR4302533.1353129/94‑1 (MQ=60)
TGTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAATCCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGT < SRR4302533.2617997/94‑1 (MQ=60)
TCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGT < SRR4302533.2108589/94‑1 (MQ=60)
CTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTC < SRR4302533.5620165/94‑1 (MQ=60)
TGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCA > SRR4302533.473675/1‑94 (MQ=60)
CTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAAC < SRR4302533.5156765/94‑1 (MQ=60)
TTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAA > SRR4302533.3455912/1‑94 (MQ=60)
TTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAAC > SRR4302533.158470/1‑94 (MQ=60)
TTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAAC < SRR4302533.4156187/94‑1 (MQ=60)
TTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACG < SRR4302533.5911273/94‑1 (MQ=60)
TTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACG < SRR4302533.3368346/94‑1 (MQ=60)
TATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGC > SRR4302533.5512081/1‑94 (MQ=60)
ATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACTACGGCC > SRR4302533.6161836/1‑94 (MQ=60)
ATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCC > SRR4302533.1784460/1‑94 (MQ=60)
TTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCA > SRR4302533.4817852/1‑94 (MQ=60)
TTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCA > SRR4302533.1961945/1‑94 (MQ=60)
TCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAG < SRR4302533.3241284/94‑1 (MQ=60)
TCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAG > SRR4302533.2803071/1‑94 (MQ=60)
AGTAAAAAATTCCGGAACTGTGGTGTATCAAAATCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG < SRR4302533.4809763/94‑1 (MQ=60)
AGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAG < SRR4302533.3653059/94‑1 (MQ=60)
TAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAG < SRR4302533.6300166/94‑1 (MQ=60)
TAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAG > SRR4302533.5183690/1‑94 (MQ=60)
TAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAG < SRR4302533.1632767/94‑1 (MQ=60)
AAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGC < SRR4302533.3290892/94‑1 (MQ=60)
AAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGC < SRR4302533.3085239/94‑1 (MQ=60)
AAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGC < SRR4302533.3491170/94‑1 (MQ=60)
AAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAACATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGC < SRR4302533.1889467/94‑1 (MQ=60)
AATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATC < SRR4302533.1327217/94‑1 (MQ=60)
AATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATC > SRR4302533.4693708/1‑94 (MQ=60)
ATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCG > SRR4302533.4768607/1‑94 (MQ=60)
ATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCG > SRR4302533.715870/1‑94 (MQ=60)
TCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGC > SRR4302533.2369423/1‑94 (MQ=60)
TCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGC > SRR4302533.1184171/1‑94 (MQ=60)
CGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAG > SRR4302533.3427923/1‑94 (MQ=60)
GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT < SRR4302533.1091525/94‑1 (MQ=60)
GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT > SRR4302533.4031262/1‑94 (MQ=60)
GGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGT > SRR4302533.2652428/1‑94 (MQ=60)
AACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTAT < SRR4302533.3350234/94‑1 (MQ=60)
ACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATT < SRR4302533.3940830/94‑1 (MQ=60)
ACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATT > SRR4302533.6072355/1‑94 (MQ=60)
ACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATT < SRR4302533.1380606/94‑1 (MQ=60)
CTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTC < SRR4302533.4729669/94‑1 (MQ=60)
TGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCA < SRR4302533.4600505/94‑1 (MQ=60)
GTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCAT < SRR4302533.5850630/94‑1 (MQ=60)
GTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAA > SRR4302533.3857002/1‑94 (MQ=60)
GTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAA < SRR4302533.611251/94‑1 (MQ=60)
TGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAA > SRR4302533.2429400/1‑94 (MQ=60)
GTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAC > SRR4302533.3800552/1‑94 (MQ=60)
GTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAAC < SRR4302533.4841357/94‑1 (MQ=60)
TATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACC > SRR4302533.585328/1‑94 (MQ=60)
ATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCG < SRR4302533.2289523/94‑1 (MQ=60)
CAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGAT > SRR4302533.1879083/1‑94 (MQ=60)
AAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGA < SRR4302533.1623262/94‑1 (MQ=60)
AACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGAT < SRR4302533.1553815/94‑1 (MQ=60)
CCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACcggccgagagcgggcggcagtattacttaaacctatcataa > SRR4302533.3494782/1‑53 (MQ=60)
CTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATA < SRR4302533.5675599/94‑1 (MQ=60)
TGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAA < SRR4302533.5271010/94‑1 (MQ=60)
TGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAA < SRR4302533.4030697/94‑1 (MQ=60)
GCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAC < SRR4302533.5206867/94‑1 (MQ=60)
GCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAC < SRR4302533.2740258/94‑1 (MQ=60)
GCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAAC < SRR4302533.2887313/94‑1 (MQ=60)
TCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACAT < SRR4302533.2683730/94‑1 (MQ=60)
CAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATT > SRR4302533.3443078/1‑94 (MQ=60)
AATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTC < SRR4302533.3412230/94‑1 (MQ=60)
AATATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTC > SRR4302533.6200666/1‑94 (MQ=60)
ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCC < SRR4302533.4619827/94‑1 (MQ=60)
ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCC > SRR4302533.1122138/1‑94 (MQ=60)
ATCTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACAGATGATATAAACATTCTCC > SRR4302533.3508739/1‑94 (MQ=60)
CTATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGG < SRR4302533.6148212/94‑1 (MQ=60)
TATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGG < SRR4302533.5164654/94‑1 (MQ=60)
TATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGG < SRR4302533.5516783/94‑1 (MQ=60)
TATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGG < SRR4302533.2004918/94‑1 (MQ=60)
ATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGA < SRR4302533.4047087/94‑1 (MQ=60)
ATGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGA < SRR4302533.5863128/94‑1 (MQ=60)
TGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGAC < SRR4302533.2683533/94‑1 (MQ=60)
TGAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGAC < SRR4302533.3208803/94‑1 (MQ=60)
GAAAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACA > SRR4302533.6180006/1‑94 (MQ=60)
AAGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATA < SRR4302533.3455911/94‑1 (MQ=60)
AGAAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAG < SRR4302533.4639827/94‑1 (MQ=60)
AAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAA < SRR4302533.514700/94‑1 (MQ=60)
AAAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAA > SRR4302533.4080314/1‑94 (MQ=60)
AAATCGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAAT > SRR4302533.2078501/1‑94 (MQ=60)
CGTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTT < SRR4302533.1101377/94‑1 (MQ=60)
GTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTC > SRR4302533.5252309/1‑94 (MQ=60)
GTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTC > SRR4302533.1930737/1‑94 (MQ=60)
GTCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGAGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTC > SRR4302533.3509781/1‑94 (MQ=60)
TCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCT < SRR4302533.774069/94‑1 (MQ=60)
TCTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCT < SRR4302533.2017070/94‑1 (MQ=60)
CTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAATCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTT > SRR4302533.3528936/1‑94 (MQ=60)
CTGCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTT > SRR4302533.4476604/1‑94 (MQ=60)
GCGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCA > SRR4302533.2403190/1‑94 (MQ=60)
CGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCAT < SRR4302533.2958157/94‑1 (MQ=60)
CGTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCAT < SRR4302533.2252055/94‑1 (MQ=60)
GTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATC < SRR4302533.5026604/94‑1 (MQ=60)
GTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATC < SRR4302533.74250/94‑1 (MQ=60)
GTAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATC > SRR4302533.2315253/1‑94 (MQ=60)
TAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCG < SRR4302533.961949/94‑1 (MQ=60)
TAGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCG > SRR4302533.2682451/1‑94 (MQ=60)
AGGGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGT > SRR4302533.4165873/1‑94 (MQ=60)
GGCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTT < SRR4302533.5487392/94‑1 (MQ=60)
GCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTT < SRR4302533.6010136/94‑1 (MQ=60)
GCATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTT < SRR4302533.3270326/94‑1 (MQ=60)
CATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC < SRR4302533.2321773/94‑1 (MQ=60)
CATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC < SRR4302533.2525829/94‑1 (MQ=60)
CATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC > SRR4302533.1291290/1‑94 (MQ=60)
CATGGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC > SRR4302533.3727448/1‑94 (MQ=60)
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TTCTGCTTTTTTATTCAGTAAAAAATTCCGGAACTGTGGTGTATCAAAACCTGGCTCAATATCTATGAAAGAAAATCGTCTGCGTAGGGCATAGTCAACAACGGCCAGAGAGCGATCGGCAGTATTCATTAAACCGATGATATAAACATTCTCCGGGACATAGAATCGTTCTTCATCGTTTTC > NC_000913/4575786‑4575968
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
