Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,593,336 +G intergenic (‑23/‑208) yjjM ← / → yjjN hypothetical protein/putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,593,3351.G99.8% 1553.4 / ‑5.4 478intergenic (‑22/‑209)yjjM/yjjNhypothetical protein/putative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base . (1/0);  major base G (272/204);  minor base A (1/0);  total (274/204)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.48e-01

Only 100 of 537 total aligned reads displayed.

TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAT  >  NC_000913/4593243‑4593422
                                                                                              |                                                                                       
tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑t                                                                                          >  1:9788427/1‑93 (MQ=255)
 gCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑g                                                                                        <  2:9591029/93‑1 (MQ=255)
 gCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑g                                                                                        >  2:7274512/1‑93 (MQ=255)
   gTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑gga                                                                                      >  1:7859097/1‑91 (MQ=255)
   gTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑gga                                                                                      >  1:1341502/1‑91 (MQ=255)
    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑ggaa                                                                                     >  1:7538257/1‑90 (MQ=255)
    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑ggaa                                                                                     >  2:1347321/1‑90 (MQ=255)
    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑ggaa                                                                                     >  2:3183239/1‑90 (MQ=255)
    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑ggaa                                                                                     >  2:4904676/1‑90 (MQ=255)
     cAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑ggaag                                                                                    <  1:8459264/93‑5 (MQ=255)
     cAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCCACAGCGCACTTTGCGA‑T‑ggaag                                                                                    <  1:1839597/93‑5 (MQ=255)
           gccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGa                                                                               >  2:4344213/3‑93 (MQ=255)
            ccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGaa                                                                              >  1:10005802/2‑93 (MQ=255)
             cgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAg                                                                             >  1:5397088/1‑93 (MQ=255)
              gcATTCGCGTAAGTGTCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAgg                                                                            <  1:6747162/93‑1 (MQ=255)
               cATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAggg                                                                           >  1:171923/1‑93 (MQ=255)
               cATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAggg                                                                           >  1:2563049/1‑93 (MQ=255)
                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGgggaggga                                                                          >  1:9046839/1‑93 (MQ=255)
                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGa                                                                          <  1:2176728/93‑1 (MQ=255)
                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGa                                                                          >  1:3939157/1‑93 (MQ=255)
                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGa                                                                          >  2:6943171/1‑93 (MQ=255)
                 ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGCAGAGat                                                                         >  1:4265903/1‑93 (MQ=255)
                 ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGat                                                                         >  2:1901444/1‑93 (MQ=255)
                  tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGata                                                                        <  2:5080547/93‑1 (MQ=255)
                  gcgctTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGata                                                                        <  1:8817342/92‑1 (MQ=255)
                      gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAc                                                                    >  1:6869001/1‑93 (MQ=255)
                      gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAc                                                                    >  1:9509684/1‑93 (MQ=255)
                      gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAc                                                                    >  2:5539368/1‑93 (MQ=255)
                        aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAccc                                                                  >  2:7960364/1‑93 (MQ=255)
                        aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAccc                                                                  <  1:9325674/93‑1 (MQ=255)
                        aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAccc                                                                  <  2:1512467/93‑1 (MQ=255)
                         aGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAcccc                                                                 <  1:526186/93‑1 (MQ=255)
                         aGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGAcccc                                                                 <  2:4495721/93‑1 (MQ=255)
                          gTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCcg                                                                >  1:609750/1‑93 (MQ=255)
                          gTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCcg                                                                >  2:1001796/1‑93 (MQ=255)
                           tGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCcgc                                                               >  2:1635991/1‑93 (MQ=255)
                               tGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCa                                                           >  2:3417228/1‑93 (MQ=255)
                               tGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCa                                                           >  2:9896254/1‑93 (MQ=255)
                                gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                          <  1:1036680/93‑1 (MQ=255)
                                gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                          >  1:7333714/1‑93 (MQ=255)
                                  gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCatat                                                        >  1:2209925/1‑93 (MQ=255)
                                   aaTATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATatc                                                       >  2:3696579/1‑93 (MQ=255)
                                    atatGACGCACTGTGGTGCGGCTGTTGTTGTACTTTTCCGCCAGCGCACTTTGCGA‑TGGAGGTGGGGAAGGGATATGACCCCGCGCCCTatca                                                      <  1:8981867/93‑1 (MQ=255)
                                    atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATatca                                                      >  2:7489829/1‑93 (MQ=255)
                                    atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATatca                                                      <  1:719540/93‑1 (MQ=255)
                                    atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATatca                                                      >  2:7912258/1‑93 (MQ=255)
                                      atGACGCGCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcatc                                                    <  1:8599930/93‑1 (MQ=255)
                                      atGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcatc                                                    >  2:2542546/1‑93 (MQ=255)
                                       tGACGCACTGTGGTGCGGCTGATGGTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATAtcatca                                                   >  2:536594/1‑93 (MQ=255)
                                        gccGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCaa                                                  <  2:851936/91‑1 (MQ=255)
                                         aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                 >  1:2690334/1‑93 (MQ=255)
                                          cGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATg                                                <  1:3122099/93‑1 (MQ=255)
                                          cGCACTGTGGTGCCGCTGATGTTGTACATTTCCGCCAGCGCACCTTGCGA‑TGGGAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAta                                                >  2:5183427/1‑92 (MQ=255)
                                            cACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAc                                              >  1:3322108/1‑93 (MQ=255)
                                             aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAcc                                             >  2:7038057/1‑93 (MQ=255)
                                              cTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCt                                            >  1:3703912/1‑93 (MQ=255)
                                              cTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCt                                            >  2:3919000/1‑93 (MQ=255)
                                              cTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCt                                            <  2:3843824/93‑1 (MQ=255)
                                               tgtgGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTg                                           <  2:4200232/93‑1 (MQ=255)
                                                gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTgg                                          >  1:3996758/1‑93 (MQ=255)
                                                 tggtgCGTCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGt                                         <  1:4938948/93‑1 (MQ=255)
                                                 tggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGt                                         <  1:4441797/93‑1 (MQ=255)
                                                   gtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTa                                       >  1:1998640/1‑93 (MQ=255)
                                                    tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTaa                                      >  2:3519719/1‑93 (MQ=255)
                                                    tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTaa                                      >  2:9794288/1‑93 (MQ=255)
                                                        gCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcac                                  >  2:2375071/1‑93 (MQ=255)
                                                          tGATGTTGTACATTTCCGCCAGCGCACTTTCCGAGG‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAt                                <  1:760197/93‑1 (MQ=255)
                                                            aTGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATTACCTGGTTAATCACATtg                              <  1:3559841/93‑1 (MQ=255)
                                                            aTGTTGTACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtg                              <  1:4738157/93‑1 (MQ=255)
                                                             tgttgtACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgt                             >  2:6665701/1‑93 (MQ=255)
                                                             tgttgtACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgt                             >  1:6621597/1‑93 (MQ=255)
                                                             tgttgtACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgg                             >  2:8180874/1‑92 (MQ=255)
                                                              gttgtACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgtg                            >  1:559810/1‑93 (MQ=255)
                                                               ttgtACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCTCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                           >  1:2367424/1‑93 (MQ=255)
                                                                tgtACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGc                          >  2:9075731/1‑93 (MQ=255)
                                                                  tACATTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGt                        <  2:2195418/93‑1 (MQ=255)
                                                                     aTTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCCTCAATGACCTGGTTAATCACATTGTGGCGTaaa                     >  1:9689740/1‑93 (MQ=255)
                                                                     aTTTCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTaaa                     >  1:5941830/1‑93 (MQ=255)
                                                                       ttCCGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAtt                   >  2:300080/1‑93 (MQ=255)
                                                                         ccGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAtttt                 >  2:925844/1‑93 (MQ=255)
                                                                          cGCCAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtg                <  1:7015843/93‑1 (MQ=255)
                                                                            ccAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtgtg              <  2:2786288/93‑1 (MQ=255)
                                                                            ccAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtgtg              >  1:4624071/1‑93 (MQ=255)
                                                                             cAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa             >  1:7748879/1‑93 (MQ=255)
                                                                             cAGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa             >  2:1167719/1‑93 (MQ=255)
                                                                              aGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa            <  2:5808260/93‑1 (MQ=255)
                                                                              aGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa            >  1:6247734/1‑93 (MQ=255)
                                                                              aGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa            >  1:8148484/1‑93 (MQ=255)
                                                                              aGCGCACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa            >  2:2025057/1‑93 (MQ=255)
                                                                               gcgcACTTTGCGA‑TGGGAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc           >  1:8034336/1‑93 (MQ=255)
                                                                               gcgcACTTTGCGA‑TGGAAGTGGGGAAGGGATAAGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc           <  1:5899972/93‑1 (MQ=255)
                                                                                  cACTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAc        >  2:6379526/1‑93 (MQ=255)
                                                                                    cTTTGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAGCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTc      >  2:5732404/1‑93 (MQ=255)
                                                                                     tttGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa     <  2:6082891/93‑1 (MQ=255)
                                                                                     tttGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa     >  1:8331394/1‑93 (MQ=255)
                                                                                     tttGCGA‑TGGAAGGGGGGAAGGGATATGACCCCGCGCCATATCATAAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGACCGACTCa     >  2:8354635/1‑93 (MQ=255)
                                                                                      ttGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCat    <  2:864947/93‑1 (MQ=255)
                                                                                      ttGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCat    >  1:5830789/1‑93 (MQ=255)
                                                                                       tGCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCata   <  2:4696751/93‑1 (MQ=255)
                                                                                        gCGA‑TGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCatat  >  2:7661550/1‑93 (MQ=255)
                                                                                              |                                                                                       
TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGA‑T‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAT  >  NC_000913/4593243‑4593422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 308 total aligned reads displayed.
TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTC  >  NC_000913/4593243‑4593429
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TGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑G                                                                                               >  SRR4302540.486281/1‑94 (MQ=60)
TGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑G                                                                                               >  SRR4302540.4068460/1‑94 (MQ=60)
 GCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GG                                                                                              <  SRR4302540.4107899/94‑1 (MQ=60)
  CGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GGA                                                                                             >  SRR4302540.1355552/1‑94 (MQ=60)
  CGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GGA                                                                                             >  SRR4302540.7950925/1‑94 (MQ=60)
  CGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GGA                                                                                             >  SRR4302540.3123073/1‑94 (MQ=60)
  CGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GGA                                                                                             >  SRR4302540.6259861/1‑94 (MQ=60)
   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                            <  SRR4302540.1044281/94‑4 (MQ=60)
   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                            >  SRR4302540.1111107/1‑91 (MQ=60)
   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                            >  SRR4302540.7622698/1‑91 (MQ=60)
   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                            <  SRR4302540.6093065/94‑4 (MQ=60)
    gcaagacgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAG                                                                                            <  SRR4302540.2916611/85‑1 (MQ=60)
    TCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAG                                                                                            >  SRR4302540.6975437/1‑94 (MQ=60)
    TCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAG                                                                                            >  SRR4302540.8031220/1‑94 (MQ=60)
     CAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGT                                                                                           <  SRR4302540.8553241/94‑1 (MQ=60)
     CAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGT                                                                                           <  SRR4302540.7257105/94‑1 (MQ=60)
     CAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGT                                                                                           <  SRR4302540.8557481/94‑1 (MQ=60)
     CAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCCACAGCGCACTTTGCGATGGAAGT                                                                                           <  SRR4302540.1859747/94‑1 (MQ=60)
      AAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTG                                                                                          <  SRR4302540.732743/94‑1 (MQ=60)
       AGACGCCGCATTCGCGTAAGTGGCTGAGGATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGG                                                                                         >  SRR4302540.2061013/1‑94 (MQ=60)
       AGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGG                                                                                         <  SRR4302540.3938716/94‑1 (MQ=60)
       AGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGATGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGG                                                                                         >  SRR4302540.9914409/1‑94 (MQ=60)
        gacgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGG                                                                                        >  SRR4302540.714993/6‑94 (MQ=60)
        gacgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGG                                                                                        >  SRR4302540.6915208/6‑94 (MQ=60)
         acgccgactgCGCGTAAGTGGCGGAGAATATGACGCACTGGGGTGCGGCTGATGGTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                       <  SRR4302540.4928711/84‑1 (MQ=60)
         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                       <  SRR4302540.2152308/90‑1 (MQ=60)
         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                       <  SRR4302540.8202764/90‑1 (MQ=60)
         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                       <  SRR4302540.1712699/90‑1 (MQ=60)
         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                       <  SRR4302540.7077379/90‑1 (MQ=60)
          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                      <  SRR4302540.3631140/91‑1 (MQ=60)
          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                      >  SRR4302540.7954758/4‑94 (MQ=60)
           gcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCTCTTTGCGAT‑Ggcagtggggag                                                                                    >  SRR4302540.1802440/3‑83 (MQ=60)
           gcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAA                                                                                     >  SRR4302540.10122340/3‑94 (MQ=60)
           gcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAA                                                                                     <  SRR4302540.8259760/92‑1 (MQ=60)
            CCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAG                                                                                    >  SRR4302540.7536491/1‑94 (MQ=60)
             CGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGG                                                                                   >  SRR4302540.5358204/1‑94 (MQ=60)
              GCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGG                                                                                  <  SRR4302540.6821713/94‑1 (MQ=60)
              GCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGG                                                                                  <  SRR4302540.3629249/94‑1 (MQ=60)
               CATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGGAGGGA                                                                                 >  SRR4302540.9155443/1‑94 (MQ=60)
               CATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGA                                                                                 <  SRR4302540.8731609/94‑1 (MQ=60)
               CATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGA                                                                                 >  SRR4302540.8140744/1‑94 (MQ=60)
               CATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGA                                                                                 <  SRR4302540.2838236/94‑1 (MQ=60)
                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGCAGAGAT                                                                                >  SRR4302540.4312298/1‑94 (MQ=60)
                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                                <  SRR4302540.2200204/94‑1 (MQ=60)
                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                                >  SRR4302540.6778520/1‑94 (MQ=60)
                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                                >  SRR4302540.9862263/1‑94 (MQ=60)
                  gcgctTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.8919289/89‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.8599922/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.10134313/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.9022112/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.2431300/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.9793688/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.9470143/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.8600259/94‑1 (MQ=60)
                  TCGCGTAAGTGGCTGAGAATATGACGCACCGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                              <  SRR4302540.4500635/94‑1 (MQ=60)
                    GCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA                                                                            <  SRR4302540.7905992/94‑1 (MQ=60)
                     CGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAC                                                                           <  SRR4302540.5543614/94‑1 (MQ=60)
                     CGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAC                                                                           >  SRR4302540.9622333/1‑94 (MQ=60)
                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                          >  SRR4302540.5335615/1‑94 (MQ=60)
                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                          >  SRR4302540.5517664/1‑94 (MQ=60)
                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                          <  SRR4302540.433585/94‑1 (MQ=60)
                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                          >  SRR4302540.4725213/1‑94 (MQ=60)
                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                          >  SRR4302540.3506531/1‑94 (MQ=60)
                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                          >  SRR4302540.3303861/1‑94 (MQ=60)
                        AAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCC                                                                        <  SRR4302540.8384711/94‑1 (MQ=60)
                        AAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCC                                                                        <  SRR4302540.9436907/94‑1 (MQ=60)
                         AGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCG                                                                       <  SRR4302540.531873/94‑1 (MQ=60)
                         AGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCG                                                                       <  SRR4302540.4025134/94‑1 (MQ=60)
                         AGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCG                                                                       >  SRR4302540.616269/1‑94 (MQ=60)
                          GTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGC                                                                      >  SRR4302540.746389/1‑94 (MQ=60)
                          GTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGC                                                                      >  SRR4302540.5145707/1‑94 (MQ=60)
                           TGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCG                                                                     >  SRR4302540.1263012/1‑94 (MQ=60)
                           TGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCG                                                                     <  SRR4302540.2008601/94‑1 (MQ=60)
                           TGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCG                                                                     <  SRR4302540.9304867/94‑1 (MQ=60)
                            GGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGC                                                                    >  SRR4302540.331449/1‑94 (MQ=60)
                             GCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCC                                                                   <  SRR4302540.9558619/94‑1 (MQ=60)
                             GCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCC                                                                   <  SRR4302540.4674309/94‑1 (MQ=60)
                               TGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCAT                                                                 <  SRR4302540.8403805/94‑1 (MQ=60)
                               TGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCAT                                                                 <  SRR4302540.6834388/94‑1 (MQ=60)
                               TGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCAT                                                                 >  SRR4302540.1508210/1‑94 (MQ=60)
                               TGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCAT                                                                 >  SRR4302540.7517547/1‑94 (MQ=60)
                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                                >  SRR4302540.8946877/1‑94 (MQ=60)
                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                                <  SRR4302540.1047222/94‑1 (MQ=60)
                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                                <  SRR4302540.7053563/94‑1 (MQ=60)
                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                                >  SRR4302540.8714715/1‑94 (MQ=60)
                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                               <  SRR4302540.10011827/94‑1 (MQ=60)
                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                               >  SRR4302540.2233794/1‑94 (MQ=60)
                                  GAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATC                                                              <  SRR4302540.7410839/94‑1 (MQ=60)
                                  GAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATC                                                              >  SRR4302540.7910478/1‑94 (MQ=60)
                                  GAATATGACGCACTGTGATGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATC                                                              <  SRR4302540.5876758/94‑1 (MQ=60)
                                    ATATGACGCACTGTGGTGCGGCTGTTGTTGTACTTTTCCGCCAGCGCACTTTGCGATGGAGGTGGGGAAGGGATATGACCCCGCGCCCTATCAT                                                            <  SRR4302540.9088968/94‑1 (MQ=60)
                                    ATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGTATATGACCCCGGGCCATctcta                                                            >  SRR4302540.6083934/1‑89 (MQ=60)
                                    ATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCAT                                                            >  SRR4302540.7652599/1‑94 (MQ=60)
                                    ATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCAT                                                            >  SRR4302540.185727/1‑94 (MQ=60)
                                      ATGACGCGCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCA                                                          <  SRR4302540.8699888/94‑1 (MQ=60)
                                      ATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCA                                                          <  SRR4302540.3990878/94‑1 (MQ=60)
                                        GACGCAGTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                        <  SRR4302540.1885783/94‑1 (MQ=60)
                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                        >  SRR4302540.9121979/1‑94 (MQ=60)
                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                        <  SRR4302540.7362617/94‑1 (MQ=60)
                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                        >  SRR4302540.2719401/1‑94 (MQ=60)
                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                        <  SRR4302540.10076424/94‑1 (MQ=60)
                                            cacggtgggtgggctgattggtTACATTGCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACC                                                    <  SRR4302540.1876853/72‑1 (MQ=60)
                                            CACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACC                                                    >  SRR4302540.1623903/1‑94 (MQ=60)
                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                   <  SRR4302540.5852541/94‑1 (MQ=60)
                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                   <  SRR4302540.4982692/94‑1 (MQ=60)
                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                   <  SRR4302540.355781/94‑1 (MQ=60)
                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                   >  SRR4302540.3744348/1‑94 (MQ=60)
                                              CTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTG                                                  <  SRR4302540.6014601/94‑1 (MQ=60)
                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                 >  SRR4302540.4039771/1‑94 (MQ=60)
                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                 >  SRR4302540.2540266/1‑94 (MQ=60)
                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                 <  SRR4302540.6513440/94‑1 (MQ=60)
                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                 >  SRR4302540.7772591/1‑94 (MQ=60)
                                                GTGGTGCGGCTGATGTTGTACCTTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGT                                                <  SRR4302540.2648089/94‑1 (MQ=60)
                                                GTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGT                                                >  SRR4302540.3681281/1‑94 (MQ=60)
                                                GTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGT                                                <  SRR4302540.8104318/94‑1 (MQ=60)
                                                 TGGTGCGTCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTT                                               <  SRR4302540.4992245/94‑1 (MQ=60)
                                                 TGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTT                                               <  SRR4302540.4489933/94‑1 (MQ=60)
                                                  GGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTA                                              >  SRR4302540.2020288/1‑94 (MQ=60)
                                                  GGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTA                                              <  SRR4302540.8672474/94‑1 (MQ=60)
                                                  GGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTA                                              <  SRR4302540.2625113/94‑1 (MQ=60)
                                                  GGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTA                                              >  SRR4302540.3992435/1‑94 (MQ=60)
                                                    TGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAAT                                            <  SRR4302540.5977888/94‑1 (MQ=60)
                                                     GCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATC                                           <  SRR4302540.4668060/94‑1 (MQ=60)
                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCA                                          >  SRR4302540.6229640/1‑94 (MQ=60)
                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCA                                          >  SRR4302540.8173442/1‑94 (MQ=60)
                                                       GGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCAC                                         >  SRR4302540.5213597/1‑94 (MQ=60)
                                                        GCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACA                                        >  SRR4302540.6673161/1‑94 (MQ=60)
                                                        GCTGATGTTGTACATTTCCGCCAGCGCACTATGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACA                                        <  SRR4302540.8503741/94‑1 (MQ=60)
                                                         CTGATGTTGTACATTTCCGCCAGCGCTCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAT                                       <  SRR4302540.4880611/94‑1 (MQ=60)
                                                         CTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAT                                       >  SRR4302540.70858/1‑94 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGGAGTGGGGAAGGGATAGGACCCCGCGCCATATCATCAATGACCTGGTTCATCACATT                                      >  SRR4302540.5654091/1‑94 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                      <  SRR4302540.7283930/94‑1 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                      >  SRR4302540.6046119/1‑94 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                      >  SRR4302540.5032675/1‑94 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                      >  SRR4302540.5909701/1‑94 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                      <  SRR4302540.768284/94‑1 (MQ=60)
                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGACATGACCCCGCGCCATATCATCAATCACCTGGGTAATCACATT                                      >  SRR4302540.9778369/1‑94 (MQ=60)
                                                           TATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTG                                     <  SRR4302540.5963362/94‑1 (MQ=60)
                                                           GATGTTGTACATTTCCGCCAGCGGACTTTGCGATGGAAGTGGGGAAGGGATATGCCCCCGCGCCATATCATCAATGACCTGGTTAATCACATTG                                     <  SRR4302540.8971859/94‑1 (MQ=60)
                                                           GATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTG                                     >  SRR4302540.7666814/1‑94 (MQ=60)
                                                           GATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTG                                     >  SRR4302540.2235610/1‑94 (MQ=60)
                                                           GATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTG                                     >  SRR4302540.8234086/1‑94 (MQ=60)
                                                           GATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTG                                     <  SRR4302540.9770426/94‑1 (MQ=60)
                                                            ATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGT                                    >  SRR4302540.6694914/1‑94 (MQ=60)
                                                            ATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGT                                    >  SRR4302540.6694915/1‑94 (MQ=60)
                                                            ATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGT                                    <  SRR4302540.4788732/94‑1 (MQ=60)
                                                             TGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTG                                   >  SRR4302540.565897/1‑94 (MQ=60)
                                                              GTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCTCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGG                                  >  SRR4302540.2392921/1‑94 (MQ=60)
                                                              GTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGG                                  <  SRR4302540.3561133/94‑1 (MQ=60)
                                                                TGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCG                                >  SRR4302540.47827/1‑94 (MQ=60)
                                                                 GTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGT                               >  SRR4302540.2521622/1‑94 (MQ=60)
                                                                  TACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTA                              >  SRR4302540.9464054/1‑94 (MQ=60)
                                                                    CATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCCTCAATGACCTGGTTAATCACATTGTGGCGTAAA                            >  SRR4302540.9803712/1‑94 (MQ=60)
                                                                     ATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAT                           >  SRR4302540.2684526/1‑94 (MQ=60)
                                                                      TTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACACTGTGGCGTAAATT                          <  SRR4302540.1561452/94‑1 (MQ=60)
                                                                        TCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTT                        >  SRR4302540.7710618/1‑94 (MQ=60)
                                                                        TCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTT                        >  SRR4302540.7710343/1‑94 (MQ=60)
                                                                          CGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGT                      >  SRR4302540.7181161/1‑94 (MQ=60)
                                                                          CGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGT                      >  SRR4302540.7804190/1‑94 (MQ=60)
                                                                          CGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGT                      <  SRR4302540.920701/94‑1 (MQ=60)
                                                                           GCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTG                     >  SRR4302540.4336850/1‑94 (MQ=60)
                                                                           GCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTG                     <  SRR4302540.9833158/94‑1 (MQ=60)
                                                                           GCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTG                     >  SRR4302540.4673621/1‑94 (MQ=60)
                                                                            CCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGA                    <  SRR4302540.5341934/94‑1 (MQ=60)
                                                                            CCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGA                    >  SRR4302540.7839357/1‑94 (MQ=60)
                                                                             CAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAA                   >  SRR4302540.6317262/1‑94 (MQ=60)
                                                                             CAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAA                   >  SRR4302540.2252021/1‑94 (MQ=60)
                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                  >  SRR4302540.9111702/1‑94 (MQ=60)
                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                  <  SRR4302540.10003376/94‑1 (MQ=60)
                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACACCGCGCCATCTCATCAATGAACTGGTTAATCACGTTCGGGCGCAAATTTTGTGAAC                  >  SRR4302540.9111701/1‑94 (MQ=57)
                                                                               GGGCACGTTGCGATGGAAGTGGGGAACGGATATGACCCCGCTCCATATCATCAATGACCGGGTTAATCACATTGTGGCGTAAATGTTGTGAACG                 <  SRR4302540.2218288/94‑1 (MQ=60)
                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                 <  SRR4302540.2218287/94‑1 (MQ=60)
                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                 >  SRR4302540.6006616/1‑94 (MQ=60)
                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                 <  SRR4302540.5766482/94‑1 (MQ=60)
                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATAAGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                 <  SRR4302540.5965127/94‑1 (MQ=60)
                                                                                CGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGA                >  SRR4302540.845622/1‑94 (MQ=60)
                                                                                  CACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACT              >  SRR4302540.2167457/1‑94 (MQ=60)
                                                                                   ACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTC             >  SRR4302540.6496946/1‑94 (MQ=60)
                                                                                   ACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTC             >  SRR4302540.8007769/1‑94 (MQ=60)
                                                                                   ACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTC             >  SRR4302540.3823800/1‑94 (MQ=60)
                                                                                   ACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTC             >  SRR4302540.6834296/1‑94 (MQ=60)
                                                                                    CTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCA            >  SRR4302540.3243719/1‑94 (MQ=60)
                                                                                    CTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCA                                                                  >  SRR4302540.2342491/1‑40 (MQ=60)
                                                                                     TTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCAT           <  SRR4302540.425349/94‑1 (MQ=60)
                                                                                     TTTGCGATAGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCAT           >  SRR4302540.5895259/1‑94 (MQ=60)
                                                                                      TTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATA          >  SRR4302540.181453/1‑94 (MQ=60)
                                                                                       TGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAT         <  SRR4302540.3944925/94‑1 (MQ=60)
                                                                                         ggatgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTT       <  SRR4302540.3409254/89‑1 (MQ=60)
                                                                                         CGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTT       >  SRR4302540.2071919/1‑94 (MQ=60)
                                                                                          GATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT      >  SRR4302540.9206063/1‑94 (MQ=60)
                                                                                          GATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT      >  SRR4302540.4534466/1‑94 (MQ=60)
                                                                                          GATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT      >  SRR4302540.2371628/1‑94 (MQ=60)
                                                                                          GATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT      <  SRR4302540.3695583/94‑1 (MQ=60)
                                                                                           atgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTC     >  SRR4302540.7265119/4‑94 (MQ=60)
                                                                                           atgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTC     <  SRR4302540.1241699/91‑1 (MQ=60)
                                                                                            tgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCC    <  SRR4302540.9262734/92‑1 (MQ=60)
                                                                                            tgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCC    >  SRR4302540.806942/3‑94 (MQ=60)
                                                                                            tgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCC    <  SRR4302540.2766299/92‑1 (MQ=60)
                                                                                            G‑GAAGTGGGGAAGGGATATGACGCCGCGCCATATCATCAATGACCTGGTTAATCGCATTGTGGCGTAAATTTTGTGAAGGAGTCATATTTTCCT   >  SRR4302540.3915217/1‑94 (MQ=60)
                                                                                              GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTC  >  SRR4302540.4821139/1‑94 (MQ=60)
                                                                                              |                                                                                             
TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTC  >  NC_000913/4593243‑4593429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑