Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,601,614	(A)_7→6	coding (569/726 nt)	yjjQ →	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,601,608	0	A	.	99.8%	2059.0 / ‑3.0	451	coding (563/726 nt)	yjjQ	putative regulator
Reads supporting (aligned to +/- strand): ref base A (1/0); new base . (240/210); total (241/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 530 total aligned reads displayed.

AGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTT  >  NC_000913/4601516‑4601696

agagCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCa                                                                                          <  1:1850380/93‑1 (MQ=255)

agagCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGAGCCCa                                                                                          >  2:6420511/1‑93 (MQ=255)

     gcAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaa                                                                                     >  2:9208998/1‑93 (MQ=255)

       aaGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaaca                                                                                   <  1:1413650/93‑3 (MQ=255)

       aaGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaaca                                                                                   <  1:4450364/93‑3 (MQ=255)

       aaGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaaca                                                                                   <  2:4852114/93‑3 (MQ=255)

        aGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaacag                                                                                  >  1:4871177/1‑90 (MQ=255)

         ggTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaacagt                                                                                 >  1:5809728/1‑89 (MQ=255)

         ggTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaacagt                                                                                 >  2:4472174/1‑89 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                               >  2:3014933/1‑93 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                               <  2:2536957/93‑1 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                               <  1:2828409/93‑1 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                               <  2:1871225/93‑1 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                               >  1:4259553/1‑93 (MQ=255)

           tACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGc                                                                              <  1:5657189/93‑1 (MQ=255)

            aCTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCg                                                                             >  1:919869/1‑93 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  1:6506178/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  2:7599445/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  1:5988324/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  1:3778605/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  1:9339829/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  1:336612/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                            <  2:5473705/93‑1 (MQ=255)

              tGCGGCTATTAGGTAAAGGATGGGGCATCAGCCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAt                                                                           <  2:7058987/93‑1 (MQ=255)

              tGCGGCTATTAGATAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAt                                                                           >  2:7456104/1‑93 (MQ=255)

                cGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGc                                                                         >  2:4253656/1‑93 (MQ=255)

                 ggCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCg                                                                        >  2:5165638/1‑93 (MQ=255)

                 ggCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCg                                                                        <  2:8210029/93‑1 (MQ=255)

                  gCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGt                                                                       <  1:6812325/93‑1 (MQ=255)

                     aTTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGa                                                                    <  1:6397946/93‑1 (MQ=255)

                     aTTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGa                                                                    >  2:1616756/1‑93 (MQ=255)

                     aTTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGa                                                                    >  1:8558159/1‑93 (MQ=255)

                      ttAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAc                                                                   <  2:4768606/93‑1 (MQ=255)

                       tAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACt                                                                  <  2:2478865/93‑1 (MQ=255)

                          gTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGc                                                               >  2:9293695/1‑93 (MQ=255)

                            aaaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCGC‑AAAAACCAGGGCGATGCGTACACTGGCaa                                                             >  2:1007336/1‑93 (MQ=255)

                            aaaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGGaa                                                             >  1:3886369/1‑93 (MQ=255)

                             aaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAAt                                                            <  2:8089077/93‑1 (MQ=255)

                             aaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAAt                                                            <  2:1246023/93‑1 (MQ=255)

                               ggATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCTTCGACTGGCAATTc                                                          <  2:3579673/93‑1 (MQ=255)

                                gATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTca                                                         >  2:5647875/1‑93 (MQ=255)

                                 aTGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTcac                                                        >  2:6033722/1‑93 (MQ=255)

                                  tGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTcaca                                                       >  2:9696171/1‑93 (MQ=255)

                                   ggggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAg                                                      >  2:8800423/1‑93 (MQ=255)

                                   ggggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAg                                                      >  1:5501612/1‑93 (MQ=255)

                                    gggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGc                                                     >  2:4047402/1‑93 (MQ=255)

                                    gggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGc                                                     >  2:2321792/1‑93 (MQ=255)

                                         tCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGc                                                >  1:5889796/1‑93 (MQ=255)

                                         tCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGc                                                >  2:9097137/1‑93 (MQ=255)

                                         tCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGc                                                >  2:5342339/1‑93 (MQ=255)

                                         tCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGc                                                <  2:198820/93‑1 (MQ=255)

                                          cAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCt                                               <  1:520677/93‑1 (MQ=255)

                                            aCCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAACACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGa                                             <  1:8831875/93‑1 (MQ=255)

                                            aCCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGa                                             <  1:9698508/93‑1 (MQ=255)

                                            aCCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGa                                             >  1:9487173/1‑93 (MQ=255)

                                             ccAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGaa                                            >  2:5406008/1‑93 (MQ=255)

                                              cAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGaaa                                           <  1:6584934/93‑1 (MQ=255)

                                               aGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAt                                          >  1:7926813/1‑93 (MQ=255)

                                               aGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAt                                          >  2:7752819/1‑93 (MQ=255)

                                                gATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATg                                         >  2:6629116/1‑93 (MQ=255)

                                                gATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATg                                         >  1:3259427/1‑93 (MQ=255)

                                                 aTAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGt                                        <  2:3304497/93‑1 (MQ=255)

                                                    gCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATg                                     <  2:3757109/93‑1 (MQ=255)

                                                    gCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATg                                     >  2:6258044/1‑93 (MQ=255)

                                                      ttCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCa                                   >  1:3620803/1‑93 (MQ=255)

                                                      atCATTGCTTAAGAAAAGTCGTCACACTGTCAGCGCCCAAAAGAA‑AGAACGCTGCAACGAAAGGCCATTCACAACAAAGCAGAAATAAATGCa                                   <  1:7723344/92‑1 (MQ=255)

                                                       tCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAt                                  <  2:7332640/93‑1 (MQ=255)

                                                       tCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAt                                  <  2:9742633/93‑1 (MQ=255)

                                                       tCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAt                                  >  1:837329/1‑93 (MQ=255)

                                                        cATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATg                                 >  2:4660831/1‑93 (MQ=255)

                                                         aTTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATgg                                <  2:433787/93‑1 (MQ=255)

                                                          ttGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGa                               >  1:1003631/1‑93 (MQ=255)

                                                          ttGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGa                               >  1:2604644/1‑93 (MQ=255)

                                                          ttGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGa                               >  1:817757/1‑93 (MQ=255)

                                                           tGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGGAACGCTGAAATGTATGCATGGAt                              >  2:1439774/1‑93 (MQ=255)

                                                            gCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATa                             >  1:2346794/1‑93 (MQ=255)

                                                             cTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATaa                            <  1:2995498/93‑1 (MQ=255)

                                                             cTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATaa                            >  1:6130251/1‑93 (MQ=255)

                                                              ttAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATaaa                           >  2:5934376/1‑93 (MQ=255)

                                                              ttAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATaaa                           >  1:2123478/1‑93 (MQ=255)

                                                              ttAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATaaa                           <  2:1918396/93‑1 (MQ=255)

                                                               tAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAt                          >  1:5077225/1‑93 (MQ=255)

                                                               tAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAt                          <  1:7309271/93‑1 (MQ=255)

                                                                aaGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATa                         <  2:5072215/93‑1 (MQ=255)

                                                                aaGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATa                         <  1:1755869/93‑1 (MQ=255)

                                                                  gAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgc                       <  2:7903011/93‑1 (MQ=255)

                                                                    aaaGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgcgc                     >  1:766298/1‑93 (MQ=255)

                                                                    aaaGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgcgc                     >  2:843872/1‑93 (MQ=255)

                                                                      aGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgcgcgc                   <  1:7821566/93‑1 (MQ=255)

                                                                       gTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCa                  <  2:6153344/93‑1 (MQ=255)

                                                                          ataaAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAggg               <  2:6825305/93‑1 (MQ=255)

                                                                           taaAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAgggg              >  1:987800/1‑92 (MQ=255)

                                                                            aaaaCTATCAGCGCCC‑AAAAAACAGTGCGATGCGCCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTg             <  2:2894062/93‑1 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga        <  2:2755337/93‑1 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga        >  2:9469260/1‑93 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga        >  1:1587138/1‑93 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga        >  2:1684393/1‑93 (MQ=255)

                                                                                  aTCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAagag       >  1:9375938/1‑93 (MQ=255)

                                                                                   tCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAgaga      >  2:6746787/1‑93 (MQ=255)

                                                                                     aGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaac    <  1:7080564/93‑1 (MQ=255)

AGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTT  >  NC_000913/4601516‑4601696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 260 total aligned reads displayed.

GCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  >  NC_000913/4601521‑4601707

  AAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAG                                                                                            >  SRR4302540.2686374/1‑94 (MQ=60)

  AAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAG                                                                                            <  SRR4302540.4498604/94‑1 (MQ=60)

  AAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAG                                                                                            >  SRR4302540.4923439/1‑94 (MQ=60)

  AAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAG                                                                                            <  SRR4302540.1428901/94‑1 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                           >  SRR4302540.9349705/1‑94 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                           <  SRR4302540.7652046/94‑1 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                           >  SRR4302540.9498966/1‑94 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                           <  SRR4302540.5849520/94‑1 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                           >  SRR4302540.5873940/1‑94 (MQ=60)

    GGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTG                                                                                          >  SRR4302540.4305888/1‑94 (MQ=60)

     GTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGC                                                                                         <  SRR4302540.6588718/94‑1 (MQ=60)

     GTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGC                                                                                         <  SRR4302540.4313626/94‑1 (MQ=60)

      TACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCG                                                                                        <  SRR4302540.5719483/94‑1 (MQ=60)

       ACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGA                                                                                       >  SRR4302540.4751659/1‑94 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                      <  SRR4302540.6054655/94‑1 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                      >  SRR4302540.9604014/1‑94 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                      <  SRR4302540.3819823/94‑1 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                      <  SRR4302540.3234691/94‑1 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                      <  SRR4302540.6578488/94‑1 (MQ=60)

         TGCGGTTATTAGGAAAAGGAGGGGGAATCAACAGGATAGTTTCATTGCTAAAGAAAA‑TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGC                                                                                    <  SRR4302540.1886796/94‑1 (MQ=33)

           CGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCG                                                                                   <  SRR4302540.5955652/94‑1 (MQ=60)

           CGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCG                                                                                   <  SRR4302540.784841/94‑1 (MQ=60)

            GGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGT                                                                                  >  SRR4302540.9384525/1‑94 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                 >  SRR4302540.4421506/1‑94 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                 <  SRR4302540.1814343/94‑1 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                 <  SRR4302540.1814342/94‑1 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                 <  SRR4302540.6887708/94‑1 (MQ=60)

              CTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCG                                                                                >  SRR4302540.8433354/1‑94 (MQ=60)

               TATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGA                                                                               >  SRR4302540.6757134/1‑94 (MQ=60)

                ATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAC                                                                              <  SRR4302540.6469173/94‑1 (MQ=60)

                AGTAGGTAAAGGATGCGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAC                                                                              <  SRR4302540.9150540/94‑1 (MQ=60)

                 TTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACT                                                                             <  SRR4302540.2742730/94‑1 (MQ=60)

                   AGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGG                                                                           <  SRR4302540.6517154/94‑1 (MQ=60)

                    GGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGC                                                                          <  SRR4302540.9111921/94‑1 (MQ=60)

                     GTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCA                                                                         <  SRR4302540.3855619/94‑1 (MQ=60)

                      TAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGGAA                                                                        >  SRR4302540.3928583/1‑94 (MQ=60)

                       AAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAAT                                                                       >  SRR4302540.5131957/1‑94 (MQ=60)

                        AAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATT                                                                      >  SRR4302540.1815072/1‑94 (MQ=60)

                          GGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCA                                                                    >  SRR4302540.8869374/1‑94 (MQ=60)

                           GATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCAC                                                                   >  SRR4302540.6562250/1‑94 (MQ=60)

                           GATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCAC                                                                   <  SRR4302540.6105985/94‑1 (MQ=60)

                           GATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCAC                                                                   >  SRR4302540.6562249/1‑94 (MQ=60)

                           GATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCAC                                                                   >  SRR4302540.8620701/1‑94 (MQ=60)

                           GATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCAC                                                                   >  SRR4302540.8938086/1‑94 (MQ=60)

                            ATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑ATAAAACAGTGCGATGCGTCGACTGGCAATTCACA                                                                  >  SRR4302540.414606/1‑94 (MQ=60)

                            ATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACA                                                                  <  SRR4302540.3413090/94‑1 (MQ=60)

                            ATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACA                                                                  >  SRR4302540.6653818/1‑94 (MQ=60)

                            ATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACA                                                                  <  SRR4302540.9477184/94‑1 (MQ=60)

                             TGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAG                                                                 <  SRR4302540.781708/94‑1 (MQ=60)

                              GGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGC                                                                <  SRR4302540.2247505/94‑1 (MQ=60)

                              GGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGC                                                                >  SRR4302540.7946718/1‑94 (MQ=60)

                               GGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAACACAGTGCGATGCGTCGACTGGCAATTCACAGCA                                                               >  SRR4302540.9803086/1‑94 (MQ=60)

                               GGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCA                                                               <  SRR4302540.1351765/94‑1 (MQ=60)

                               GGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCA                                                               <  SRR4302540.3168150/94‑1 (MQ=60)

                                  CATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACG                                                            >  SRR4302540.3735751/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                           >  SRR4302540.3887235/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                           >  SRR4302540.1456385/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                           >  SRR4302540.6664696/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                           >  SRR4302540.5954867/1‑94 (MQ=60)

                                    TCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCT                                                          >  SRR4302540.5883967/1‑94 (MQ=60)

                                    ACAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCAC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCT                                                          <  SRR4302540.3745431/94‑1 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTG                                                         <  SRR4302540.526262/94‑1 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTG                                                         >  SRR4302540.1573010/1‑94 (MQ=60)

                                      AACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGA                                                        >  SRR4302540.9599651/1‑94 (MQ=60)

                                       ACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAACACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAA                                                       <  SRR4302540.8934019/94‑1 (MQ=60)

                                       ACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAA                                                       <  SRR4302540.9812536/94‑1 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAT                                                     >  SRR4302540.9681479/1‑94 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAT                                                     <  SRR4302540.2304738/94‑1 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAT                                                     <  SRR4302540.421525/94‑1 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAT                                                     <  SRR4302540.6657871/94‑1 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                    >  SRR4302540.9489949/1‑94 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                    >  SRR4302540.3267623/1‑94 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                    >  SRR4302540.1957672/1‑94 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                    >  SRR4302540.9920579/1‑94 (MQ=60)

                                           GATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGT                                                   >  SRR4302540.645842/1‑94 (MQ=60)

                                            ATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTA                                                  <  SRR4302540.9483900/94‑1 (MQ=60)

                                            ATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTA                                                  >  SRR4302540.9294761/1‑94 (MQ=60)

                                             TAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTAT                                                 <  SRR4302540.7130543/94‑1 (MQ=60)

                                             TAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTAT                                                 >  SRR4302540.10060591/1‑94 (MQ=60)

                                             TAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTAT                                                 <  SRR4302540.7130542/94‑1 (MQ=60)

                                             TAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTAT                                                 >  SRR4302540.2691920/1‑94 (MQ=60)

                                              AGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATG                                                >  SRR4302540.4893591/1‑94 (MQ=60)

                                               GCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGC                                               <  SRR4302540.8810894/94‑1 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                              >  SRR4302540.3660416/1‑94 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                              >  SRR4302540.7749609/1‑94 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                             <  SRR4302540.9770541/94‑1 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                             >  SRR4302540.846220/1‑94 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                             <  SRR4302540.731283/94‑1 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                             <  SRR4302540.5372859/94‑1 (MQ=60)

                                                  TCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATG                                            >  SRR4302540.4266915/1‑94 (MQ=60)

                                                  TCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATG                                            <  SRR4302540.5340449/94‑1 (MQ=60)

                                                   CATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGG                                           <  SRR4302540.5326488/94‑1 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                          >  SRR4302540.1013819/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                          >  SRR4302540.2632742/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                          <  SRR4302540.789579/94‑1 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                          >  SRR4302540.4641573/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                          >  SRR4302540.826446/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                          >  SRR4302540.8652009/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTACGCATGGA                                          >  SRR4302540.8652008/1‑94 (MQ=60)

                                                     TTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGAT                                         <  SRR4302540.2432251/94‑1 (MQ=60)

                                                     TTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGAT                                         <  SRR4302540.1956611/94‑1 (MQ=60)

                                                      TGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATA                                        >  SRR4302540.2372077/1‑94 (MQ=60)

                                                      TGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATA                                        >  SRR4302540.815968/1‑94 (MQ=60)

                                                       GCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAA                                       >  SRR4302540.6198532/1‑94 (MQ=60)

                                                       GCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAA                                       <  SRR4302540.4722287/94‑1 (MQ=60)

                                                       GCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAA                                       <  SRR4302540.7020362/94‑1 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                      >  SRR4302540.6210382/1‑94 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                      <  SRR4302540.3028511/94‑1 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                      >  SRR4302540.3865661/1‑94 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                      >  SRR4302540.2863607/1‑94 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                     >  SRR4302540.5132120/1‑94 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                     <  SRR4302540.6018120/94‑1 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                     >  SRR4302540.7805082/1‑94 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTACCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                     <  SRR4302540.6017832/94‑1 (MQ=60)

                                                         TGAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                     <  SRR4302540.7839210/94‑1 (MQ=60)

                                                          TAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATA                                    <  SRR4302540.7390871/94‑1 (MQ=60)

                                                          TAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATA                                    >  SRR4302540.6807832/1‑94 (MQ=60)

                                                          TAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATA                                    <  SRR4302540.9413825/94‑1 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGTGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                   >  SRR4302540.1657488/1‑94 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                   <  SRR4302540.1774896/94‑1 (MQ=60)

                                                            AGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGC                                  <  SRR4302540.5025389/94‑1 (MQ=60)

                                                             GAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCG                                 <  SRR4302540.7769446/94‑1 (MQ=60)

                                                             GAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCG                                 <  SRR4302540.5721640/94‑1 (MQ=60)

                                                             GAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCG                                 <  SRR4302540.2533861/94‑1 (MQ=60)

                                                              AAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGC                                >  SRR4302540.774461/1‑94 (MQ=60)

                                                               AAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGC                                >  SRR4302540.5952751/1‑94 (MQ=60)

                                                                AAGTAATAAAACTATCAGCGCCC‑AAAAGACAGTGCGATGCGTCGACTGGCAATTCACACCAACGCTGAAATGTATGCATGGATAAATAGCGCGC                              <  SRR4302540.5159835/94‑1 (MQ=60)

                                                                AAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGC                              <  SRR4302540.9955815/94‑1 (MQ=60)

                                                                AAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGC                              <  SRR4302540.5159834/94‑1 (MQ=60)

                                                                 AGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCA                             <  SRR4302540.7912973/94‑1 (MQ=60)

                                                                 AGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCA                             >  SRR4302540.5607029/1‑94 (MQ=60)

                                                                 AGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCA                             >  SRR4302540.5607030/1‑94 (MQ=60)

                                                                  GTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAG                            <  SRR4302540.6082484/94‑1 (MQ=60)

                                                                  GTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAG                            >  SRR4302540.5779599/1‑94 (MQ=60)

                                                                  ATAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAG                            <  SRR4302540.5682264/94‑1 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCATG                           >  SRR4302540.7964857/1‑94 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGG                           <  SRR4302540.2196852/94‑1 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGAATGGATAAATAGCGCGCAGG                           >  SRR4302540.3310439/1‑94 (MQ=60)

                                                                    AATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGG                          >  SRR4302540.3398835/1‑94 (MQ=60)

                                                                    AATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGG                          >  SRR4302540.9483804/1‑94 (MQ=60)

                                                                    AATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGG                          >  SRR4302540.2244804/1‑94 (MQ=60)

                                                                    AATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGG                          >  SRR4302540.3398833/1‑94 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         <  SRR4302540.9230263/94‑1 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         <  SRR4302540.2972820/94‑1 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         >  SRR4302540.9311299/1‑94 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         <  SRR4302540.8685545/94‑1 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         >  SRR4302540.1708891/1‑94 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         >  SRR4302540.340953/1‑94 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         <  SRR4302540.8248461/94‑1 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                         <  SRR4302540.3739607/94‑1 (MQ=60)

                                                                      TAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTG                        <  SRR4302540.2399313/94‑1 (MQ=60)

                                                                       AAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGC                       >  SRR4302540.756057/1‑94 (MQ=60)

                                                                       AAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGC                       <  SRR4302540.9881755/94‑1 (MQ=60)

                                                                        AAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCA                      <  SRR4302540.3310875/94‑1 (MQ=60)

                                                                         AACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAA                     <  SRR4302540.1158648/94‑1 (MQ=60)

                                                                          ACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAG                    >  SRR4302540.100825/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                   >  SRR4302540.6323720/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                   >  SRR4302540.7142855/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                   >  SRR4302540.8373358/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                   >  SRR4302540.1604473/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                   <  SRR4302540.7950597/94‑1 (MQ=60)

                                                                            TATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAG                  <  SRR4302540.7353710/94‑1 (MQ=60)

                                                                            TATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAG                  >  SRR4302540.5052011/1‑94 (MQ=60)

                                                                             ATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGA                 <  SRR4302540.3187195/94‑1 (MQ=60)

                                                                             ATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGA                 <  SRR4302540.180736/94‑1 (MQ=60)

                                                                             ATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGA                 <  SRR4302540.1509551/94‑1 (MQ=60)

                                                                               CAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAAC               >  SRR4302540.3489180/1‑94 (MQ=60)

                                                                                AGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACT              >  SRR4302540.3000918/1‑94 (MQ=60)

                                                                                  CGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA            >  SRR4302540.7249815/1‑94 (MQ=60)

                                                                                  CGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA            <  SRR4302540.950374/94‑1 (MQ=60)

                                                                                  CGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA            <  SRR4302540.8213426/94‑1 (MQ=60)

                                                                                   GCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAC           >  SRR4302540.9619568/1‑94 (MQ=60)

                                                                                    gcgcAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAA           <  SRR4302540.5511615/90‑1 (MQ=60)

                                                                                     CCCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAAC          >  SRR4302540.2537006/1‑94 (MQ=60)

                                                                                     CCCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAAC          <  SRR4302540.2106207/94‑1 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT         >  SRR4302540.7269936/1‑94 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT         <  SRR4302540.7579770/94‑1 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT         <  SRR4302540.5001748/94‑1 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGGGCAAGAGAACTTAACT         >  SRR4302540.3468471/1‑94 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATACATAGCGCGCAGGGTGCAAGAGAACTTAACTT        >  SRR4302540.10072391/1‑94 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT        <  SRR4302540.6018787/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT        <  SRR4302540.8816520/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT        <  SRR4302540.4945583/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT        <  SRR4302540.7880233/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT        >  SRR4302540.725728/1‑94 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGAGCAGGGTGCAAGAGAACTTAACTT        >  SRR4302540.3250675/1‑94 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTG       >  SRR4302540.1183137/1‑94 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTG       <  SRR4302540.1649419/94‑1 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTC       >  SRR4302540.1602820/1‑94 (MQ=60)

                                                                                         AAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGC      >  SRR4302540.804095/1‑94 (MQ=60)

                                                                                           AAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCT    <  SRR4302540.3084296/94‑1 (MQ=60)

                                                                                           AAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCT    <  SRR4302540.1580515/94‑1 (MQ=60)

                                                                                            AACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTT   >  SRR4302540.5856564/1‑94 (MQ=60)

                                                                                            AACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTT   <  SRR4302540.8527740/94‑1 (MQ=60)

                                                                                            AACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTT   <  SRR4302540.8527741/94‑1 (MQ=60)

                                                                                             ACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  <  SRR4302540.3633214/94‑1 (MQ=60)

                                                                                             ACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  >  SRR4302540.1792084/1‑94 (MQ=60)

                                                                                             ACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  >  SRR4302540.4088475/1‑94 (MQ=60)

                                                                                             ACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  >  SRR4302540.6048576/1‑94 (MQ=60)

                                                                                             ACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  <  SRR4302540.749205/94‑1 (MQ=60)

GCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTC  >  NC_000913/4601521‑4601707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`