Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,621,644 A→G W15R (TGG→CGG)  lplA ← lipoate‑protein ligase A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,621,6440AG99.7% 1225.8 / ‑5.2 379W15R (TGG→CGG) lplAlipoate‑protein ligase A
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (170/208);  total (171/208)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01

Only 100 of 399 total aligned reads displayed.

CTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTT  >  NC_000913/4621554‑4621733
                                                                                          |                                                                                         
 tacCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCgg                                                                                        >  1:4581264/1‑93 (MQ=255)
 tacCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCgg                                                                                        >  2:7699350/1‑93 (MQ=255)
  acCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCggg                                                                                       >  2:4845142/1‑93 (MQ=255)
  acCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCggg                                                                                       <  1:2365210/93‑1 (MQ=255)
   ccGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGt                                                                                      <  1:7209083/93‑1 (MQ=255)
    cGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTc                                                                                     <  1:5797184/93‑1 (MQ=255)
    cGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTc                                                                                     <  2:6749148/93‑1 (MQ=255)
       gtCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTa                                                                                  >  1:1906507/1‑93 (MQ=255)
        tCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGATAAACCGCGGGTCGTaa                                                                                 >  2:5059818/1‑93 (MQ=255)
         cGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAag                                                                                <  1:9134466/93‑1 (MQ=255)
         cGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAag                                                                                <  2:632653/93‑1 (MQ=255)
              ttGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCa                                                                           >  2:2503285/1‑93 (MQ=255)
              ttGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCa                                                                           >  2:7355500/1‑93 (MQ=255)
               tGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCag                                                                          >  2:1059239/1‑93 (MQ=255)
                gcgcCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCaga                                                                         <  2:4257356/93‑1 (MQ=255)
                 cgcCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCagag                                                                        <  1:1773183/93‑1 (MQ=255)
                  gcCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTTGCGAAAAATAAACTCTTCCATCGCGAGGTTAAACCGCGGGTCGTAAGCGTCAgaga                                                                       >  1:7019607/1‑93 (MQ=255)
                  gcCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAgaga                                                                       <  2:9131324/93‑1 (MQ=255)
                    cAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATg                                                                     <  2:7986975/93‑1 (MQ=255)
                      gagaAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAg                                                                   >  1:5198383/1‑93 (MQ=255)
                        aaaaCATATCGCGCTTCGTGGCGTGCATATGGCGAAAAATTCACTCTTCCACGGCCAGGTTAAACTGCGTGTCGTAAGAGTCAGAGTTGAGCa                                                                 <  2:6952050/92‑1 (MQ=255)
                         aaaCAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAg                                                                <  2:5548429/93‑1 (MQ=255)
                          aaCAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAgg                                                               >  1:6460397/1‑93 (MQ=255)
                          aaCAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAgg                                                               <  2:3357604/93‑1 (MQ=255)
                           aCAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGc                                                              <  1:2203948/93‑1 (MQ=255)
                               aaCGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGGGTaa                                                          >  2:2643049/1‑93 (MQ=255)
                               aaCGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTaa                                                          >  1:8290791/1‑93 (MQ=255)
                               aaCGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTaa                                                          >  1:6325789/1‑93 (MQ=255)
                                 cgcgCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAAtg                                                        <  2:860510/93‑1 (MQ=255)
                                 cgcgCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAAtg                                                        <  1:7635330/93‑1 (MQ=255)
                                   cgcTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAAtgtg                                                      >  2:8768598/1‑93 (MQ=255)
                                    gcTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTgg                                                     >  2:5406574/1‑93 (MQ=255)
                                    gcTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTgg                                                     >  1:4333169/1‑93 (MQ=255)
                                     cTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGa                                                    >  1:1973513/1‑93 (MQ=255)
                                     cTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGa                                                    <  1:5025939/93‑1 (MQ=255)
                                      tGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGAc                                                   <  1:2465122/93‑1 (MQ=255)
                                       gCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGAct                                                  >  2:3176765/1‑92 (MQ=255)
                                        cGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACAt                                                 <  1:3001772/93‑1 (MQ=255)
                                        cGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACAt                                                 <  1:1112151/93‑1 (MQ=255)
                                         gTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATa                                                <  2:3637633/93‑1 (MQ=255)
                                         gTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATa                                                >  2:980836/1‑93 (MQ=255)
                                           ggCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAAc                                              <  1:4257937/93‑1 (MQ=255)
                                            gCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGCGTCGGAGATGAGCAGGCGTAATGTGGACATCACg                                             >  2:2061983/1‑93 (MQ=255)
                                               ggCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTCATGTGGACATAACGAtt                                          >  2:7855715/1‑93 (MQ=255)
                                                  aTTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTcc                                       >  2:3864351/1‑93 (MQ=255)
                                                  aTTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTcc                                       >  2:616134/1‑93 (MQ=255)
                                                  aTTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTcc                                       <  2:8170767/93‑1 (MQ=255)
                                                  aTTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGGCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTcc                                       >  2:5109399/1‑93 (MQ=255)
                                                   tttGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCt                                      <  2:4354982/93‑1 (MQ=255)
                                                   tttGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCt                                      <  1:6683340/93‑1 (MQ=255)
                                                   tttGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCt                                      >  1:9620056/1‑93 (MQ=255)
                                                   tttGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCt                                      <  1:5106310/93‑1 (MQ=255)
                                                   tttGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCt                                      >  1:10018402/1‑93 (MQ=255)
                                                    ttGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCtt                                     >  1:1035379/1‑93 (MQ=255)
                                                     tGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCttt                                    >  1:4840512/1‑93 (MQ=255)
                                                       gCGAAAAATACACTCTTCCACCTCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTTGACATAACGATTTCCTTTCt                                  <  1:3427698/93‑1 (MQ=255)
                                                        cGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCtt                                 >  2:7226069/1‑93 (MQ=255)
                                                        cGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCtt                                 <  1:7960920/93‑1 (MQ=255)
                                                         gAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTg                                <  2:8902193/93‑1 (MQ=255)
                                                         gAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTg                                >  1:7371236/1‑93 (MQ=255)
                                                          aaaaaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgt                               <  2:9537987/93‑1 (MQ=255)
                                                          aaaaaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgt                               <  2:714286/93‑1 (MQ=255)
                                                          aaaaaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgt                               >  1:5901721/1‑93 (MQ=255)
                                                          aaaaaTACACTCTACCACCGCCAGGTTACACCGCGGGTCGTAAGAGTCAGAGATGAGCAGACGTAATGTGGACATAACGATTTCCTTTCTTgt                               <  1:8976247/93‑1 (MQ=255)
                                                           aaaaTACACTCTGCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgta                              <  1:1402153/93‑1 (MQ=255)
                                                            aaaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgtag                             <  1:5506522/93‑1 (MQ=255)
                                                            aaaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgtag                             <  1:3529554/93‑1 (MQ=255)
                                                            aaaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgtag                             >  2:1205781/1‑93 (MQ=255)
                                                             aaTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgtagt                            <  2:5758261/93‑1 (MQ=255)
                                                              aTACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgtagta                           <  2:4771177/93‑1 (MQ=255)
                                                               tACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTaa                          <  1:695790/93‑1 (MQ=255)
                                                               tACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTaa                          >  1:6007414/1‑93 (MQ=255)
                                                                acacTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAt                         <  2:6246051/93‑1 (MQ=255)
                                                                 cacTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATg                        >  1:2847093/1‑93 (MQ=255)
                                                                  acTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAttg                       >  2:2196724/1‑91 (MQ=255)
                                                                  acTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATgg                       <  2:813501/93‑1 (MQ=255)
                                                                   ctctTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATggg                      >  2:2763582/1‑93 (MQ=255)
                                                                   ctctTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATggg                      >  2:4918197/1‑93 (MQ=255)
                                                                    tctTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATgggc                     >  1:8390566/1‑92 (MQ=255)
                                                                    tctTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGt                     >  2:8434843/1‑93 (MQ=255)
                                                                     ctcccACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTc                    <  2:6826519/90‑1 (MQ=255)
                                                                           ccGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCtt              <  2:2011635/93‑1 (MQ=255)
                                                                           ccGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCtt              >  2:2585494/1‑93 (MQ=255)
                                                                           ccGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCtt              >  1:2320415/1‑93 (MQ=255)
                                                                             gCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCtttt            >  1:9753910/1‑93 (MQ=255)
                                                                              ccAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCttttt           >  2:3049886/1‑93 (MQ=255)
                                                                              ccAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCttttt           >  1:3144035/1‑93 (MQ=255)
                                                                               cAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGTTTTCCTTTCTTTTAGTAATGGGTCACTCtttttt          >  1:3338275/1‑93 (MQ=255)
                                                                               cAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCtttttt          <  1:9919672/93‑1 (MQ=255)
                                                                               cAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCtttttt          <  2:9043377/93‑1 (MQ=255)
                                                                                aGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTtc         >  2:7523206/1‑93 (MQ=255)
                                                                                  gTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTtctc       >  1:947527/1‑93 (MQ=255)
                                                                                  gTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTtctc       <  1:8704229/93‑1 (MQ=255)
                                                                                  gTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTtctc       >  1:938165/1‑93 (MQ=255)
                                                                                     aaaCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCt    <  1:5573376/93‑1 (MQ=255)
                                                                                      aaCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCtt   >  1:4004081/1‑93 (MQ=255)
                                                                                      aaCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCtt   >  2:5998603/1‑93 (MQ=255)
                                                                                      aaCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCtt   >  1:8853228/1‑93 (MQ=255)
                                                                                       aCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCttt  >  2:165839/1‑93 (MQ=255)
                                                                                       aCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTGCTTGTAGTAATGGGTCACTCTTTTTTCTCGCttt  <  1:4088417/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTT  >  NC_000913/4621554‑4621733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.
TTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTT  >  NC_000913/4621551‑4621736
                                                                                             |                                                                                            
TTACTGCCGGGTCGGGATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCGCCGCCAGGTTAAACCG                                                                                              <  SRR4302540.2300251/94‑1 (MQ=60)
  ACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCG                                                                                            >  SRR4302540.2880313/1‑94 (MQ=60)
  ACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCG                                                                                            <  SRR4302540.915161/94‑1 (MQ=60)
   CTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGG                                                                                           >  SRR4302540.4630649/1‑94 (MQ=60)
   CTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGG                                                                                           <  SRR4302540.5368384/94‑1 (MQ=60)
   CTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGAGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCCCCGGCAGGTTAAACCGCGG                                                                                           >  SRR4302540.392493/1‑94 (MQ=60)
    TACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGG                                                                                          >  SRR4302540.238641/1‑94 (MQ=60)
     TCCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCTTTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGT                                                                                         <  SRR4302540.3716825/94‑1 (MQ=60)
     ACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGT                                                                                         <  SRR4302540.2390680/94‑1 (MQ=60)
      CCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTC                                                                                        <  SRR4302540.7289452/94‑1 (MQ=60)
      CCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTC                                                                                        <  SRR4302540.7289451/94‑1 (MQ=60)
      CCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTC                                                                                        <  SRR4302540.235149/94‑1 (MQ=60)
       CGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCG                                                                                       <  SRR4302540.5861242/94‑1 (MQ=60)
       CGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCG                                                                                       >  SRR4302540.7273285/1‑94 (MQ=60)
       CGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCG                                                                                       >  SRR4302540.1368829/1‑94 (MQ=60)
       CGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCAAAAAACACACTCTTCCACCGCCAGGTTAAACCGCGGGTCG                                                                                       <  SRR4302540.7237157/94‑1 (MQ=60)
        GTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGT                                                                                      >  SRR4302540.10053618/1‑94 (MQ=60)
        GTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGT                                                                                      >  SRR4302540.5586292/1‑94 (MQ=60)
        GTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGT                                                                                      >  SRR4302540.4091956/1‑94 (MQ=60)
         TGTCGGCATTGCGCCAGAGAAAGAGAACGCGATGCGTGGCGGGAATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTAGTA                                                                                     >  SRR4302540.1769768/1‑94 (MQ=60)
         TGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTA                                                                                     <  SRR4302540.3253062/94‑1 (MQ=60)
         TGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTA                                                                                     >  SRR4302540.1927343/1‑94 (MQ=60)
         TGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTA                                                                                     <  SRR4302540.8269445/94‑1 (MQ=60)
         GGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTA                                                                                     <  SRR4302540.3116372/94‑1 (MQ=60)
          TTCGGCATTGCGCCAGAGAAACAGAACGCGCTGC‑TGGTCGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAG                                                                                   <  SRR4302540.224516/94‑1 (MQ=60)
          GTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAA                                                                                    <  SRR4302540.105840/94‑1 (MQ=60)
           TCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAG                                                                                   <  SRR4302540.5895535/94‑1 (MQ=60)
           TCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAG                                                                                   <  SRR4302540.4762254/94‑1 (MQ=60)
           TCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAG                                                                                   <  SRR4302540.224514/94‑1 (MQ=60)
            CGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGA                                                                                  <  SRR4302540.9244243/94‑1 (MQ=60)
             GGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATGCACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAG                                                                                 >  SRR4302540.6912384/1‑94 (MQ=60)
             GGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACGGCGGGTCGTAAGAG                                                                                 >  SRR4302540.590117/1‑94 (MQ=60)
             GGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAG                                                                                 <  SRR4302540.9423975/94‑1 (MQ=60)
             GGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAG                                                                                 >  SRR4302540.2051873/1‑94 (MQ=60)
             GGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAG                                                                                 >  SRR4302540.5682586/1‑94 (MQ=60)
              GCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGT                                                                                >  SRR4302540.5725438/1‑94 (MQ=60)
              GCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGG                                                                                >  SRR4302540.97128/1‑94 (MQ=60)
                ATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCA                                                                              <  SRR4302540.8980892/94‑1 (MQ=60)
                  TGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGA                                                                            <  SRR4302540.1279617/94‑1 (MQ=60)
                  TGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGA                                                                            <  SRR4302540.340417/94‑1 (MQ=60)
                    CGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTTGCGAAAAATAAACTCTTCCATCGCGAGGTTAAACCGCGGGTCGTAAGCGTCAGAGA                                                                          >  SRR4302540.7097572/1‑94 (MQ=60)
                    CGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGA                                                                          <  SRR4302540.8300183/94‑1 (MQ=60)
                    CGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGA                                                                          <  SRR4302540.1792425/94‑1 (MQ=60)
                     GCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGAT                                                                         >  SRR4302540.317792/1‑94 (MQ=60)
                     GCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGAT                                                                         >  SRR4302540.9322037/1‑94 (MQ=60)
                     GCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGAT                                                                         <  SRR4302540.7506471/94‑1 (MQ=60)
                     GCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGAT                                                                         >  SRR4302540.4350071/1‑94 (MQ=60)
                       CAGAGAACCAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAAAACACTCTTCCACCGCCACGTTAAACCGCGGGTCGTACGAGTCAGAGATGG                                                                       >  SRR4302540.509187/1‑94 (MQ=60)
                       CAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGA                                                                       <  SRR4302540.4408411/94‑1 (MQ=60)
                       CAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGA                                                                       >  SRR4302540.509188/1‑94 (MQ=60)
                       CAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGA                                                                       <  SRR4302540.8934720/94‑1 (MQ=60)
                        AGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAG                                                                      >  SRR4302540.6713805/1‑94 (MQ=60)
                        AGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAG                                                                      >  SRR4302540.5984021/1‑94 (MQ=60)
                        AGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAG                                                                      <  SRR4302540.6127385/94‑1 (MQ=60)
                        AGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAG                                                                      >  SRR4302540.5254987/1‑94 (MQ=60)
                         GAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGC                                                                     <  SRR4302540.188972/94‑1 (MQ=60)
                         GAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGC                                                                     <  SRR4302540.907538/94‑1 (MQ=60)
                         GAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGC                                                                     >  SRR4302540.7083764/1‑94 (MQ=60)
                         GAGAAACAGAACGCGCTGCGTGGCGGGCATTAGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGC                                                                     >  SRR4302540.4934553/1‑94 (MQ=60)
                          AGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCA                                                                    <  SRR4302540.3531260/94‑1 (MQ=60)
                           GAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAG                                                                   <  SRR4302540.5802883/94‑1 (MQ=60)
                           GAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAG                                                                   <  SRR4302540.8086307/94‑1 (MQ=60)
                            AAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGG                                                                  <  SRR4302540.3093847/94‑1 (MQ=60)
                            AAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGG                                                                  >  SRR4302540.6532302/1‑94 (MQ=60)
                            AAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGG                                                                  >  SRR4302540.6599692/1‑94 (MQ=60)
                            AAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGG                                                                  <  SRR4302540.4117346/94‑1 (MQ=60)
                            AAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGG                                                                  <  SRR4302540.9939213/94‑1 (MQ=60)
                             AACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGC                                                                 <  SRR4302540.7565497/94‑1 (MQ=60)
                              ACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCG                                                                >  SRR4302540.525095/1‑94 (MQ=60)
                              ACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCG                                                                <  SRR4302540.2227758/94‑1 (MQ=60)
                               CAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGT                                                               >  SRR4302540.2468252/1‑94 (MQ=60)
                                 GAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAA                                                             >  SRR4302540.8387073/1‑94 (MQ=60)
                                 GAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAA                                                             >  SRR4302540.6396233/1‑94 (MQ=60)
                                  AACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAAT                                                            <  SRR4302540.5021493/94‑1 (MQ=60)
                                   ACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATG                                                           <  SRR4302540.7822325/94‑1 (MQ=60)
                                    CGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGT                                                          <  SRR4302540.7721226/94‑1 (MQ=60)
                                     GCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG                                                         <  SRR4302540.3390226/94‑1 (MQ=60)
                                     GCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG                                                         <  SRR4302540.3390445/94‑1 (MQ=60)
                                     GCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG                                                         <  SRR4302540.2489948/94‑1 (MQ=60)
                                      CGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGG                                                        >  SRR4302540.4380338/1‑94 (MQ=60)
                                      CGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGG                                                        <  SRR4302540.7883254/94‑1 (MQ=60)
                                      CGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGG                                                        >  SRR4302540.297453/1‑94 (MQ=60)
                                       GCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGA                                                       >  SRR4302540.1994937/1‑94 (MQ=60)
                                        CTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGAC                                                      <  SRR4302540.5080338/94‑1 (MQ=60)
                                         TGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACA                                                     <  SRR4302540.2491654/94‑1 (MQ=60)
                                          GCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACAT                                                    <  SRR4302540.4322348/94‑1 (MQ=60)
                                          GCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACAT                                                    >  SRR4302540.859606/1‑94 (MQ=60)
                                           CGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATA                                                   <  SRR4302540.1123665/94‑1 (MQ=60)
                                           CGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATA                                                   <  SRR4302540.3034836/94‑1 (MQ=60)
                                           CGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATA                                                   >  SRR4302540.9861089/1‑94 (MQ=60)
                                           CGTGGCGGGCATCTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATA                                                   >  SRR4302540.9861090/1‑94 (MQ=60)
                                             TGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAAC                                                 >  SRR4302540.948831/1‑94 (MQ=60)
                                              GGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACG                                                <  SRR4302540.194896/94‑1 (MQ=60)
                                              GGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACG                                                <  SRR4302540.4304257/94‑1 (MQ=60)
                                               GCGGGCATTTGGCGAAAAATACCCTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGA                                               <  SRR4302540.5486437/94‑1 (MQ=60)
                                               GCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGA                                               >  SRR4302540.1107088/1‑94 (MQ=60)
                                               GCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGA                                               <  SRR4302540.5630834/94‑1 (MQ=60)
                                                 GGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATT                                             >  SRR4302540.4518497/1‑94 (MQ=60)
                                                 GGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATT                                             <  SRR4302540.1884125/94‑1 (MQ=60)
                                                 GGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATT                                             <  SRR4302540.8462471/94‑1 (MQ=60)
                                                  GGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTT                                            <  SRR4302540.4519618/94‑1 (MQ=60)
                                                   GCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTC                                           >  SRR4302540.5610257/1‑94 (MQ=60)
                                                   GCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTC                                           >  SRR4302540.3347756/1‑94 (MQ=60)
                                                   GCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTC                                           <  SRR4302540.1454479/94‑1 (MQ=60)
                                                    CATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCC                                          >  SRR4302540.6425626/1‑94 (MQ=60)
                                                     ATTTGGCGAAAAATACCCTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         <  SRR4302540.6421038/94‑1 (MQ=60)
                                                     ATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         >  SRR4302540.10135011/1‑94 (MQ=60)
                                                     ATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         >  SRR4302540.9733452/1‑94 (MQ=60)
                                                     ATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         <  SRR4302540.9100731/94‑1 (MQ=60)
                                                     ATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         >  SRR4302540.7664340/1‑94 (MQ=60)
                                                     ATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         <  SRR4302540.3553615/94‑1 (MQ=60)
                                                     ATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCT                                         >  SRR4302540.2602346/1‑94 (MQ=60)
                                                      TTTGGCGAAAAATCCACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTT                                        <  SRR4302540.4150552/94‑1 (MQ=60)
                                                      TTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTT                                        >  SRR4302540.6163957/1‑94 (MQ=60)
                                                      TTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTT                                        >  SRR4302540.1045908/1‑94 (MQ=60)
                                                      TTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTT                                        >  SRR4302540.1045909/1‑94 (MQ=60)
                                                      TTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTT                                        <  SRR4302540.5161583/94‑1 (MQ=60)
                                                       TTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACTGCGGGCAGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGAGATAACGCTTTCTTTT                                       >  SRR4302540.186264/1‑94 (MQ=60)
                                                       TTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTT                                       >  SRR4302540.4892361/1‑94 (MQ=60)
                                                        TGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTC                                      >  SRR4302540.9695494/1‑94 (MQ=60)
                                                         GGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCT                                     <  SRR4302540.7411844/94‑1 (MQ=60)
                                                         GGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCT                                     <  SRR4302540.1963535/94‑1 (MQ=60)
                                                         GGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCT                                     >  SRR4302540.4870744/1‑94 (MQ=60)
                                                         GGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCT                                     <  SRR4302540.9242696/94‑1 (MQ=60)
                                                          GCGAAAAATACACTCTTCCCCCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTT                                    <  SRR4302540.845057/94‑1 (MQ=60)
                                                          GCGAAAAATACACTCTTCCACCTCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTTGACATAACGATTTCCTTTCTT                                    <  SRR4302540.3464950/94‑1 (MQ=60)
                                                          GCGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTT                                    <  SRR4302540.845056/94‑1 (MQ=60)
                                                           CGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTG                                   >  SRR4302540.7453399/1‑94 (MQ=60)
                                                           CGAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTG                                   <  SRR4302540.8053699/94‑1 (MQ=60)
                                                            GAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGT                                  >  SRR4302540.5966893/1‑94 (MQ=60)
                                                            GAAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGT                                  >  SRR4302540.1055602/1‑94 (MQ=60)
                                                             AAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTA                                 >  SRR4302540.6006485/1‑94 (MQ=60)
                                                             AAAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTA                                 <  SRR4302540.5326297/94‑1 (MQ=60)
                                                              AAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAG                                >  SRR4302540.1031778/1‑94 (MQ=60)
                                                              AAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAG                                <  SRR4302540.9622305/94‑1 (MQ=60)
                                                              AAAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAG                                <  SRR4302540.9567546/94‑1 (MQ=60)
                                                              AAAATACACTCTGCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAG                                <  SRR4302540.1417241/94‑1 (MQ=60)
                                                               AAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGT                               <  SRR4302540.5567167/94‑1 (MQ=60)
                                                               AAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGT                               >  SRR4302540.8823990/1‑94 (MQ=60)
                                                               AAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGT                               <  SRR4302540.3568061/94‑1 (MQ=60)
                                                               AAATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGA                               >  SRR4302540.8650658/1‑94 (MQ=60)
                                                               AAATACACTCTGCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGT                               <  SRR4302540.3568060/94‑1 (MQ=60)
                                                                AATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTA                              >  SRR4302540.2289492/1‑94 (MQ=60)
                                                                AATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTA                              <  SRR4302540.5231732/94‑1 (MQ=60)
                                                                 ATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAA                             >  SRR4302540.6074023/1‑94 (MQ=60)
                                                                 ATACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAA                             <  SRR4302540.6493756/94‑1 (MQ=60)
                                                                  TACGCTCTTGCTCCGCCAGGTTAAGCCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAT                            <  SRR4302540.6686398/94‑1 (MQ=60)
                                                                  TACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAT                            <  SRR4302540.9501646/94‑1 (MQ=60)
                                                                  TACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAT                            >  SRR4302540.400717/1‑94 (MQ=60)
                                                                  TACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAT                            <  SRR4302540.703255/94‑1 (MQ=60)
                                                                  TACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAT                            <  SRR4302540.703254/94‑1 (MQ=60)
                                                                   ACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATG                           >  SRR4302540.2877914/1‑94 (MQ=60)
                                                                   ACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATG                           <  SRR4302540.4960645/94‑1 (MQ=60)
                                                                   ACACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATG                           <  SRR4302540.6979673/94‑1 (MQ=60)
                                                                    CACTCTTCCACCGCCAGGTTAAACCGCGGGACGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATCG                          >  SRR4302540.3166277/1‑94 (MQ=60)
                                                                     ACTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGG                         >  SRR4302540.2475090/1‑94 (MQ=60)
                                                                      CTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGT                        <  SRR4302540.1903933/94‑1 (MQ=60)
                                                                      CTCTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGC                        >  SRR4302540.8487929/1‑94 (MQ=60)
                                                                      CTCTCCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGT                        <  SRR4302540.4351986/94‑1 (MQ=60)
                                                                        CTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCA                      <  SRR4302540.978679/94‑1 (MQ=60)
                                                                        CTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCA                      <  SRR4302540.5196000/94‑1 (MQ=60)
                                                                        CTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCA                      <  SRR4302540.3012704/94‑1 (MQ=60)
                                                                        CTTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCA                      <  SRR4302540.6350015/94‑1 (MQ=60)
                                                                         TTCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCAC                     >  SRR4302540.2160679/1‑94 (MQ=60)
                                                                          TCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACT                    <  SRR4302540.6006166/94‑1 (MQ=60)
                                                                          TCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACT                    <  SRR4302540.722390/94‑1 (MQ=60)
                                                                          TCCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACT                    <  SRR4302540.1511513/94‑1 (MQ=60)
                                                                           CCACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTC                   >  SRR4302540.8555980/1‑94 (MQ=60)
                                                                            CACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCT                  >  SRR4302540.2367151/1‑94 (MQ=60)
                                                                            CACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCT                  >  SRR4302540.7072751/1‑94 (MQ=60)
                                                                             ACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTT                 >  SRR4302540.2345401/1‑94 (MQ=60)
                                                                             ACCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTT                 <  SRR4302540.8876534/94‑1 (MQ=60)
                                                                              CCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTT                <  SRR4302540.7334025/94‑1 (MQ=60)
                                                                              CCGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTT                <  SRR4302540.9033362/94‑1 (MQ=60)
                                                                               CGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTT               >  SRR4302540.9868350/1‑94 (MQ=60)
                                                                               CGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTT               >  SRR4302540.5863824/1‑94 (MQ=60)
                                                                               CGCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTT               <  SRR4302540.510034/94‑1 (MQ=60)
                                                                                GCCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTT              >  SRR4302540.3178299/1‑94 (MQ=60)
                                                                                 CCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGTTTTCCTTTCTTTTAGTAATGGGTCACTCTTTTTT             >  SRR4302540.3374927/1‑94 (MQ=60)
                                                                                 CCAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTT             >  SRR4302540.9453636/1‑94 (MQ=60)
                                                                                  CAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTC            <  SRR4302540.10035514/94‑1 (MQ=60)
                                                                                  CAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTC            <  SRR4302540.2634027/94‑1 (MQ=60)
                                                                                  CAGGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTC            >  SRR4302540.4247479/1‑94 (MQ=60)
                                                                                    GGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTC          <  SRR4302540.4126865/94‑1 (MQ=60)
                                                                                    GGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTC          >  SRR4302540.957395/1‑94 (MQ=60)
                                                                                    GGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTC          >  SRR4302540.947986/1‑94 (MQ=60)
                                                                                    GGTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTC          >  SRR4302540.2013093/1‑94 (MQ=60)
                                                                                     GTTAAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCG         <  SRR4302540.8805267/94‑1 (MQ=60)
                                                                                        AAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTT      >  SRR4302540.4047182/1‑94 (MQ=60)
                                                                                        AAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTT      >  SRR4302540.9969481/1‑94 (MQ=60)
                                                                                        AAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTT      >  SRR4302540.8955647/1‑94 (MQ=60)
                                                                                        AAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTT      >  SRR4302540.8955646/1‑94 (MQ=60)
                                                                                        AAACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTT      <  SRR4302540.5634741/94‑1 (MQ=60)
                                                                                         AACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTT     <  SRR4302540.1304251/94‑1 (MQ=60)
                                                                                         AACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTT     >  SRR4302540.6830766/1‑94 (MQ=60)
                                                                                          ACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTC    <  SRR4302540.4132508/94‑1 (MQ=60)
                                                                                          ACCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTGCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTC    <  SRR4302540.4132507/94‑1 (MQ=60)
                                                                                           CCGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCT   <  SRR4302540.6562638/94‑1 (MQ=60)
                                                                                            CGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTT  <  SRR4302540.7855496/94‑1 (MQ=60)
                                                                                            CGCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTT  >  SRR4302540.4850093/1‑94 (MQ=60)
                                                                                             |                                                                                            
TTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTT  >  NC_000913/4621551‑4621736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑