Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,105,185 |
T→C |
E663E (GAA→GAG) |
b2965 ← |
ornithine decarboxylase isozyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,105,185 | 0 | T | C | 100.0%
| 654.7
/ NA
| 204 | E663E (GAA→GAG) | b2965 | ornithine decarboxylase isozyme |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/83); total (121/83) |
Only 100 of 210 total aligned reads displayed.
AACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACTTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAA > NC_000913/3105095‑3105274
|
aaCACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTc < 1:4212838/93‑1 (MQ=255)
aaCACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTc > 2:4623061/1‑93 (MQ=255)
aaCACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTc > 1:3022002/1‑93 (MQ=255)
aaCACCTCGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTc > 2:5987350/1‑93 (MQ=255)
cacCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTccc < 2:349229/93‑1 (MQ=255)
cacCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTccc > 1:3573516/1‑93 (MQ=255)
acCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTcccc > 1:4772253/1‑93 (MQ=255)
cTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCgg < 2:740461/93‑1 (MQ=255)
cTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCgg < 2:2946584/93‑1 (MQ=255)
cTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCgg < 2:3312600/93‑1 (MQ=255)
cTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCgg > 2:4032604/1‑93 (MQ=255)
tGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGt < 1:23682/93‑1 (MQ=255)
gCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTa > 2:6229492/1‑93 (MQ=255)
gCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTa > 2:1424221/1‑93 (MQ=255)
gCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTa > 1:253522/1‑93 (MQ=255)
gCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCa > 1:5258703/1‑93 (MQ=255)
gCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCa < 1:5561637/93‑1 (MQ=255)
gCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCa < 1:2982682/93‑1 (MQ=255)
gCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCa < 1:1738674/93‑1 (MQ=255)
gCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCa < 1:5842985/93‑1 (MQ=255)
tCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACg > 2:5385829/1‑93 (MQ=255)
tCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACg > 2:1574400/1‑93 (MQ=255)
tCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGAGTACCACg > 1:3722470/1‑93 (MQ=255)
ccGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGc < 1:3649279/93‑1 (MQ=255)
ggCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCaa > 2:5170337/1‑93 (MQ=255)
gCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCaaa < 1:5383781/93‑1 (MQ=255)
cGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAg > 1:2335596/1‑93 (MQ=255)
gAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGc < 2:5099221/93‑1 (MQ=255)
aaaaTCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCa < 2:5766631/93‑1 (MQ=255)
aaaaTCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCa < 2:2773142/93‑1 (MQ=255)
aaaaTCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCa < 1:2595838/93‑1 (MQ=255)
aaaTCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAGCGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCAc < 2:3225596/93‑1 (MQ=255)
tCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGcc > 2:5775274/1‑93 (MQ=255)
tCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGcc < 2:4979809/93‑1 (MQ=255)
cccGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCa < 1:1311730/93‑1 (MQ=255)
cccGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCa < 2:692437/93‑1 (MQ=255)
ccGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGACCCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAg < 2:1192463/93‑1 (MQ=255)
ccGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAg < 1:597378/93‑1 (MQ=255)
cGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAgg < 1:5586717/93‑1 (MQ=255)
cGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAgg < 2:366241/93‑1 (MQ=255)
caacaaATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTgg > 1:5623463/1‑93 (MQ=255)
caacaaATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTgg > 2:5618028/1‑93 (MQ=255)
aacaaATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGa > 2:1919405/1‑93 (MQ=255)
caaATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATa < 1:1173955/93‑1 (MQ=255)
caaATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATa < 1:4815577/93‑1 (MQ=255)
aaaTTCCCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATaa < 1:340116/93‑1 (MQ=255)
aaaTTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATaa > 2:2989131/1‑93 (MQ=255)
cACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCaa < 2:5281532/93‑1 (MQ=255)
cccccTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAAc < 1:161740/92‑1 (MQ=255)
aCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAAc < 2:4083935/93‑1 (MQ=255)
aCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAAc > 2:1550706/1‑93 (MQ=255)
ccccTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACg > 1:3157776/1‑93 (MQ=255)
cccTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGc > 1:6023162/1‑93 (MQ=255)
cccTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGc > 2:5843151/1‑93 (MQ=255)
ccTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGcc < 2:4560513/93‑1 (MQ=255)
ccTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGcc > 1:665296/1‑93 (MQ=255)
ttcttcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGcccc > 2:4834238/1‑93 (MQ=255)
ttcttcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGcccc > 1:1073164/1‑93 (MQ=255)
ttcttcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGcccc > 1:5283448/1‑93 (MQ=255)
cttcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCtt > 2:1320793/1‑93 (MQ=255)
cttcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCtt < 2:3718330/93‑1 (MQ=255)
ttcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTc < 1:3654649/93‑1 (MQ=255)
tcCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCt < 1:6283413/93‑1 (MQ=255)
aGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGcc > 2:1670115/1‑93 (MQ=255)
aGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCCTCTGcc > 2:4473937/1‑93 (MQ=255)
gTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCg > 1:3936956/1‑93 (MQ=255)
gCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCa > 1:2879245/1‑93 (MQ=255)
cAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCaa > 2:2571200/1‑93 (MQ=255)
aaGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAAt > 2:4947365/1‑93 (MQ=255)
aGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAAtt > 2:115854/1‑93 (MQ=255)
aGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAAtt > 1:2390884/1‑93 (MQ=255)
ggAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTc < 2:2674142/93‑1 (MQ=255)
ggAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTc < 2:4203344/93‑1 (MQ=255)
ggAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTc < 1:5526206/93‑1 (MQ=255)
gAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCg < 1:1426743/93‑1 (MQ=255)
aaTAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGcc < 2:1030087/93‑1 (MQ=255)
aaTAACGTTGAACCGCCCCACCCCAGAACTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGcc > 2:1042271/1‑93 (MQ=255)
tAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCt > 1:2112581/1‑93 (MQ=255)
aCGTTGATCCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGAATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTc < 2:2781355/93‑1 (MQ=255)
ttGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGc > 2:3841209/1‑93 (MQ=255)
aaCCGCCCCACCCAAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATc > 2:6049442/1‑93 (MQ=255)
aCCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCa > 2:4151931/1‑93 (MQ=255)
gCCCCACCCCAGACCTCCCCGGGGACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGa > 2:826321/1‑93 (MQ=255)
ccccaccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGaa < 1:2725966/93‑1 (MQ=255)
ccccaccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGaa > 2:3527507/1‑93 (MQ=255)
ccaccccaGCCCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTGCTGCCGCAATTCGCCCTTCGGCATCACGAATc < 2:2355118/93‑1 (MQ=255)
ccaccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATc < 1:4646844/93‑1 (MQ=255)
ccaccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATc > 2:2255577/1‑93 (MQ=255)
caccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATcc > 1:4331909/1‑93 (MQ=255)
caccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATcc < 1:1529454/93‑1 (MQ=255)
accccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCg > 2:1503249/1‑93 (MQ=255)
ccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGc > 2:2808357/1‑93 (MQ=255)
ccccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGc > 2:2153330/1‑93 (MQ=255)
cccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCa > 2:3386639/1‑93 (MQ=255)
ccaGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCAc > 1:2237906/1‑93 (MQ=255)
caGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCAcc > 2:1800330/1‑93 (MQ=255)
aGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCa > 1:1815420/1‑93 (MQ=255)
aGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCa > 2:3194162/1‑93 (MQ=255)
gACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCaa < 1:1378728/93‑1 (MQ=255)
gACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCaa > 1:6211832/1‑93 (MQ=255)
|
AACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACTTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAA > NC_000913/3105095‑3105274
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACTTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACTCC > NC_000913/3105092‑3105278
|
ATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACC > SRR4302533.5328560/1‑94 (MQ=60)
TAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCT < SRR4302533.2804515/94‑1 (MQ=60)
AAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGTAAATAACGTTGAACCGCCCCACCCCAGACCTC < SRR4302533.3441844/94‑1 (MQ=60)
AAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTC > SRR4302533.2498223/1‑94 (MQ=60)
AAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTC > SRR4302533.3040491/1‑94 (MQ=60)
AACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCC < SRR4302533.4238322/94‑1 (MQ=60)
ACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCC < SRR4302533.5299904/94‑1 (MQ=60)
ACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCC > SRR4302533.3595534/1‑94 (MQ=60)
CACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCC > SRR4302533.4801175/1‑94 (MQ=60)
CACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCC > SRR4302533.5999909/1‑94 (MQ=60)
TTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGT < SRR4302533.4811221/94‑1 (MQ=60)
TGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTA > SRR4302533.255078/1‑94 (MQ=60)
TGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTA < SRR4302533.23840/94‑1 (MQ=60)
CAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACC < SRR4302533.3129174/94‑1 (MQ=60)
CAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACC < SRR4302533.3630361/94‑1 (MQ=60)
AGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCA > SRR4302533.5290278/1‑94 (MQ=60)
GCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCAC < SRR4302533.5878309/94‑1 (MQ=60)
GCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCAC < SRR4302533.3000927/94‑1 (MQ=60)
GCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCAC < SRR4302533.1749219/94‑1 (MQ=60)
GCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCAC < SRR4302533.5595245/94‑1 (MQ=60)
CTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGAGTACCACG > SRR4302533.3745312/1‑94 (MQ=60)
TCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGC > SRR4302533.1613838/1‑94 (MQ=60)
CCGGCGAAAATCCCGGCAACAAATTCCCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCA < SRR4302533.3674372/94‑1 (MQ=60)
CCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGTAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCA < SRR4302533.4112995/94‑1 (MQ=60)
CCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCA < SRR4302533.3671718/94‑1 (MQ=60)
GGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAA > SRR4302533.5730318/1‑94 (MQ=60)
GGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAA > SRR4302533.5583311/1‑94 (MQ=60)
GCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAG > SRR4302533.2350053/1‑94 (MQ=60)
GCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAG < SRR4302533.2383322/94‑1 (MQ=60)
GCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAG < SRR4302533.5416125/94‑1 (MQ=60)
GAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCA < SRR4302533.1340173/94‑1 (MQ=60)
AAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCAC > SRR4302533.3026283/1‑94 (MQ=60)
AAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCAC < SRR4302533.2611790/94‑1 (MQ=60)
AAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACG > SRR4302533.1463377/1‑94 (MQ=60)
ATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCC > SRR4302533.514421/1‑94 (MQ=60)
ATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCC > SRR4302533.1948987/1‑94 (MQ=60)
TCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCA > SRR4302533.4793702/1‑94 (MQ=60)
CCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAG < SRR4302533.1319603/94‑1 (MQ=60)
CCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGG < SRR4302533.600900/94‑1 (MQ=60)
CCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGG > SRR4302533.5327337/1‑94 (MQ=60)
CCGGAAACAAATTCACCCCTTCTTCCAGTGCAGGGAAATAACGTTGAACCTCCCCACCCCAGCCCTCCCCGGGTCCCACGCAAAGCACGCCATG < SRR4302533.600901/94‑1 (MQ=60)
CGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGT < SRR4302533.5620472/94‑1 (MQ=60)
GCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGG > SRR4302533.5657451/1‑94 (MQ=60)
CAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGA > SRR4302533.2365065/1‑94 (MQ=60)
CAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGA > SRR4302533.4145801/1‑94 (MQ=60)
AACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGAT < SRR4302533.4532529/94‑1 (MQ=60)
AACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGAT > SRR4302533.2810051/1‑94 (MQ=60)
ACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATA > SRR4302533.5940596/1‑94 (MQ=60)
CAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAA < SRR4302533.1181002/94‑1 (MQ=60)
CAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAA < SRR4302533.4844763/94‑1 (MQ=60)
AAATTCCCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAG < SRR4302533.342193/94‑1 (MQ=60)
CCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACG < SRR4302533.162771/94‑1 (MQ=60)
CCCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACG < SRR4302533.5490867/94‑1 (MQ=60)
ACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACG > SRR4302533.3177210/1‑94 (MQ=60)
ACCCCTTCTGCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACG < SRR4302533.1136231/94‑1 (MQ=60)
CCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGC > SRR4302533.6059663/1‑94 (MQ=60)
CCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCC > SRR4302533.669225/1‑94 (MQ=60)
CCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCC > SRR4302533.6190379/1‑94 (MQ=60)
CCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCC > SRR4302533.2159114/1‑94 (MQ=60)
CTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCC > SRR4302533.1079491/1‑94 (MQ=60)
CTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCC > SRR4302533.5315100/1‑94 (MQ=60)
TTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCT > SRR4302533.6303138/1‑94 (MQ=60)
TTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCT < SRR4302533.2588226/94‑1 (MQ=60)
TCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTT < SRR4302533.820994/94‑1 (MQ=60)
TTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCT < SRR4302533.3677115/94‑1 (MQ=60)
TTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCT > SRR4302533.4258311/1‑94 (MQ=60)
TCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTG < SRR4302533.6320908/94‑1 (MQ=60)
AGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCG > SRR4302533.3960988/1‑94 (MQ=60)
TGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCA > SRR4302533.3703261/1‑94 (MQ=60)
TGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCA > SRR4302533.2896956/1‑94 (MQ=60)
CAAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAAT > SRR4302533.472510/1‑94 (MQ=60)
AAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATT > SRR4302533.331069/1‑94 (MQ=60)
AAGGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATT > SRR4302533.2405647/1‑94 (MQ=60)
GGAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCG < SRR4302533.5559567/94‑1 (MQ=60)
GAAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGC < SRR4302533.1435367/94‑1 (MQ=60)
AAATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGCGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCC > SRR4302533.5599099/1‑94 (MQ=60)
AATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCC < SRR4302533.267263/94‑1 (MQ=60)
ATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCT < SRR4302533.3544778/94‑1 (MQ=60)
ATAACGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCT > SRR4302533.2125613/1‑94 (MQ=60)
CGTTGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGG > SRR4302533.5629158/1‑94 (MQ=60)
TGAACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCAT > SRR4302533.1408613/1‑94 (MQ=60)
AACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCA > SRR4302533.178554/1‑94 (MQ=60)
ACCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCAC < SRR4302533.1690984/94‑1 (MQ=60)
CCGCCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACG < SRR4302533.6030325/94‑1 (MQ=60)
CCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAAT < SRR4302533.2224331/94‑1 (MQ=60)
CCCCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAAT < SRR4302533.2742686/94‑1 (MQ=60)
CCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCC > SRR4302533.4358008/1‑94 (MQ=60)
CCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCC < SRR4302533.4675002/94‑1 (MQ=60)
CCACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCC > SRR4302533.2269742/1‑94 (MQ=60)
CACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCG < SRR4302533.1538652/94‑1 (MQ=60)
ACCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGC > SRR4302533.6323094/1‑94 (MQ=60)
CCCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCA > SRR4302533.2930482/1‑94 (MQ=60)
CCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCAC > SRR4302533.2251737/1‑94 (MQ=60)
CCCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCAC < SRR4302533.3914403/94‑1 (MQ=60)
CCAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACC > SRR4302533.1306303/1‑94 (MQ=60)
CAGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCA > SRR4302533.1826504/1‑94 (MQ=60)
AGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAA > SRR4302533.6249083/1‑94 (MQ=60)
AGACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAA > SRR4302533.3164359/1‑94 (MQ=60)
GACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAAC > SRR4302533.4761766/1‑94 (MQ=60)
GACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAAC < SRR4302533.1387023/94‑1 (MQ=60)
ACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACT < SRR4302533.5203598/94‑1 (MQ=60)
ACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACT > SRR4302533.818893/1‑94 (MQ=60)
ACCTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACT > SRR4302533.4742438/1‑94 (MQ=60)
CTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACTCC > SRR4302533.2963262/1‑94 (MQ=60)
CTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACTCC < SRR4302533.3387782/94‑1 (MQ=60)
CTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACTCC > SRR4302533.1421523/1‑94 (MQ=60)
CTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACTCC > SRR4302533.892699/1‑94 (MQ=60)
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ATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAATAACGTTGAACCGCCCCACCCCAGACTTCCCCGGGTACCACGCAAAGCACGCCAGGTGGATAAGGCAACGCCCCTTCTGCCGCAATTCGCCCTTCGGCATCACGAATCCGCACCAACTCC > NC_000913/3105092‑3105278
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
