Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,376,038 |
A→G |
G83G (GGT→GGC) |
rplM ← |
50S ribosomal subunit protein L13 |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,376,038 | 0 | A | G | 100.0%
| 766.6
/ NA
| 236 | G83G (GGT→GGC) | rplM | 50S ribosomal subunit protein L13 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (126/110); total (126/110) |
Only 100 of 261 total aligned reads displayed.
CGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGAT > NC_000913/3375948‑3376127
|
cGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgcc > 2:195727/1‑93 (MQ=255)
gggCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgcca > 2:802851/1‑93 (MQ=255)
gggCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgcca > 2:5527775/1‑93 (MQ=255)
gggCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgcca < 1:731090/93‑1 (MQ=255)
ggCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgccac > 1:1311285/1‑93 (MQ=255)
ggCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgccac < 1:1891324/93‑1 (MQ=255)
ggCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgccac < 1:6123891/93‑1 (MQ=255)
gCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATgccacc > 1:3497844/1‑93 (MQ=255)
ttttGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAt > 2:4042117/1‑93 (MQ=255)
ttttGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAt > 1:353190/1‑93 (MQ=255)
tttGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAtg > 1:206566/1‑93 (MQ=255)
ttGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAtgt < 1:3197275/93‑1 (MQ=255)
ttGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAtgt > 1:2983230/1‑93 (MQ=255)
ggCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTgg < 2:4226759/93‑1 (MQ=255)
ggCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTgg > 1:633326/1‑93 (MQ=255)
gCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGc < 2:890915/93‑1 (MQ=255)
aaCATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCg < 2:1062982/93‑1 (MQ=255)
aaCATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCg > 1:1695951/1‑93 (MQ=255)
aCATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCgg > 2:5221476/1‑93 (MQ=255)
aCATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCgg < 1:2575365/93‑1 (MQ=255)
aTGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCggcg > 1:4170103/1‑91 (MQ=255)
tGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGgtgg > 1:1092197/1‑92 (MQ=255)
tGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCCATGTGGCCGgtgt < 2:3183997/93‑1 (MQ=255)
gCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGtgtg < 2:6038681/93‑1 (MQ=255)
ccTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTgtgg > 2:1628197/1‑93 (MQ=255)
ccTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTgtgg < 1:905041/93‑1 (MQ=255)
cTTTAACCGCTATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTgtggt < 2:1316730/93‑1 (MQ=255)
cTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTgtggt < 1:1445456/93‑1 (MQ=255)
tttAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTgtggtg < 2:2263779/93‑1 (MQ=255)
tttAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTgtggtg > 1:3341444/1‑93 (MQ=255)
ttAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGa > 1:5201757/1‑93 (MQ=255)
tAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGAt > 2:4079279/1‑93 (MQ=255)
aaCCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATa > 1:5052328/1‑93 (MQ=255)
aCCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAg > 2:3346337/1‑93 (MQ=255)
ccGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGt > 1:2967873/1‑93 (MQ=255)
gATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTacac > 1:5979768/1‑93 (MQ=255)
gATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTacac > 2:2165620/1‑93 (MQ=255)
aTTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATCGTACACt > 1:1061411/1‑93 (MQ=255)
aTTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACt > 2:2648992/1‑93 (MQ=255)
tttCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTTTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACtt < 1:792494/93‑1 (MQ=255)
tttCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACtt > 2:4939381/1‑93 (MQ=255)
ttCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACttt < 2:87075/93‑1 (MQ=255)
tCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTg > 1:4834412/1‑93 (MQ=255)
cAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGt > 2:1835252/1‑93 (MQ=255)
aaTCACACCCTCAGGACGGCAAGCAATCATCTCTTCAAAGGTCGTTTGTTTGATGCCACCGATGTGCCCGGTGTGGTGATAGTACCCTTTGTc < 2:508346/93‑1 (MQ=255)
aTCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCa < 1:1032734/93‑1 (MQ=255)
aTCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCa < 1:2864588/93‑1 (MQ=255)
aTCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCa < 1:3560435/93‑1 (MQ=255)
aTCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCa > 1:4551980/1‑93 (MQ=255)
tCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAg > 2:4481063/1‑93 (MQ=255)
tCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAg < 2:4608612/93‑1 (MQ=255)
acacGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTa > 1:5406411/1‑93 (MQ=255)
acacGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTa > 2:3564592/1‑93 (MQ=255)
acacGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTa < 2:2445466/93‑1 (MQ=255)
cacGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTAc < 1:2202833/93‑1 (MQ=255)
acGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCGCCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACg > 1:3253784/1‑93 (MQ=255)
cGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGc < 2:2826142/93‑1 (MQ=255)
cGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGc < 1:227681/93‑1 (MQ=255)
cGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGc > 1:563562/1‑93 (MQ=255)
gCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTCCACTTTGTCAGTACGCt < 1:1942042/93‑1 (MQ=255)
gCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCt > 1:4185459/1‑93 (MQ=255)
gCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCt > 1:1461997/1‑93 (MQ=255)
cTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCtt < 2:5859305/93‑1 (MQ=255)
cTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCtt > 1:486695/1‑93 (MQ=255)
tCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCttg < 2:2851216/93‑1 (MQ=255)
aGGACGGCTATCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCttgtt < 2:1000799/93‑1 (MQ=255)
aGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCttgtt < 1:5319125/93‑1 (MQ=255)
aCGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGcc > 2:5465303/1‑93 (MQ=255)
cGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCg > 1:5864504/1‑93 (MQ=255)
gCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGt < 1:1180392/93‑1 (MQ=255)
gCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGt < 2:6066622/93‑1 (MQ=255)
atcTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACt > 1:4779544/1‑93 (MQ=255)
atcTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACt < 1:3079169/93‑1 (MQ=255)
acctctACAAGGCTCGCTTGTTTGATGCCGCCGATGGGGCCGGTGTGGTGATAGTACTCTTTTTCATTACGTTTGTTGCCGGTTACAGCAACt < 2:2936510/91‑1 (MQ=255)
tctcTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACtt > 1:4249242/1‑93 (MQ=255)
tctcTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACtt < 1:1902164/93‑1 (MQ=255)
ctctTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACttt < 1:4059862/93‑1 (MQ=255)
tctTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTg < 2:3545696/93‑1 (MQ=255)
ctTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGt < 1:818500/93‑1 (MQ=255)
ttCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTc > 1:1616004/1‑93 (MQ=255)
ttCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTc < 1:752293/93‑1 (MQ=255)
ttCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTc > 2:4720295/1‑93 (MQ=255)
cAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAg > 2:2073253/1‑93 (MQ=255)
cAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGGACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAg > 1:2806923/1‑93 (MQ=255)
aaaGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGc > 2:3252737/1‑93 (MQ=255)
aaaGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGc > 1:2673281/1‑93 (MQ=255)
aGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGt > 1:573172/1‑93 (MQ=255)
aGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGt < 2:5308363/93‑1 (MQ=255)
ggTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGtt > 2:1670448/1‑93 (MQ=255)
gTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTc < 2:3723016/93‑1 (MQ=255)
gTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTc > 1:642794/1‑93 (MQ=255)
gTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTc > 1:2752386/1‑93 (MQ=255)
cGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAg > 1:3140728/1‑93 (MQ=255)
cTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGaa > 1:3785840/1‑93 (MQ=255)
ttGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAAc < 1:5539613/93‑1 (MQ=255)
tGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGATTACAGCAACTTTGTCAGCGTTCAGAACg > 2:6191983/1‑93 (MQ=255)
gTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACga > 1:4355554/1‑93 (MQ=255)
gTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACga < 2:4696052/93‑1 (MQ=255)
tGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACgatga < 1:3849834/93‑1 (MQ=255)
gATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGATTGTTGCCGGTTACAGCAACTTTGTAAGCGTTCAGAACgatgag < 2:5931999/93‑2 (MQ=255)
|
CGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGAT > NC_000913/3375948‑3376127
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA > NC_000913/3375945‑3376131
|
CAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATG < SRR4302533.770651/94‑1 (MQ=60)
CGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCA > SRR4302533.4967147/1‑94 (MQ=60)
CGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCA < SRR4302533.739238/94‑1 (MQ=60)
CGGGCATTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCA < SRR4302533.3212830/94‑1 (MQ=60)
GGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCAC > SRR4302533.4893386/1‑94 (MQ=60)
GGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCAC < SRR4302533.5160813/94‑1 (MQ=60)
GGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCAC < SRR4302533.735396/94‑1 (MQ=60)
GGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCAC > SRR4302533.4066087/1‑94 (MQ=60)
GGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCAC > SRR4302533.5965792/1‑94 (MQ=60)
GGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCAC > SRR4302533.1319157/1‑94 (MQ=60)
GGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACC < SRR4302533.6160807/94‑1 (MQ=60)
GGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACC < SRR4302533.1902869/94‑1 (MQ=60)
GGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACC > SRR4302533.3519413/1‑94 (MQ=60)
GCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCG > SRR4302533.3247921/1‑94 (MQ=60)
GCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCG < SRR4302533.2487109/94‑1 (MQ=60)
CTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAT < SRR4302533.205779/94‑1 (MQ=60)
CTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAT > SRR4302533.2247011/1‑94 (MQ=60)
CTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAT > SRR4302533.2834318/1‑94 (MQ=60)
CTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAT < SRR4302533.3526194/94‑1 (MQ=60)
CTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAT > SRR4302533.355344/1‑94 (MQ=60)
CTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGAT < SRR4302533.4177538/94‑1 (MQ=60)
TTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATG < SRR4302533.2997317/94‑1 (MQ=60)
TTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATG > SRR4302533.207875/1‑94 (MQ=60)
TTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGT > SRR4302533.6149458/1‑94 (MQ=60)
TTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGT > SRR4302533.3001478/1‑94 (MQ=60)
TTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTG < SRR4302533.3216953/94‑1 (MQ=60)
TGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGG > SRR4302533.637052/1‑94 (MQ=60)
GCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCC > SRR4302533.1206009/1‑94 (MQ=60)
CAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCG > SRR4302533.1706223/1‑94 (MQ=60)
AACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGG > SRR4302533.2701997/1‑94 (MQ=60)
AACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGG > SRR4302533.5829166/1‑94 (MQ=60)
AACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGG > SRR4302533.915022/1‑94 (MQ=60)
AACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGG < SRR4302533.1637966/94‑1 (MQ=60)
ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGT < SRR4302533.2591208/94‑1 (MQ=60)
ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGT > SRR4302533.5728693/1‑94 (MQ=60)
CATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGCG > SRR4302533.4195372/1‑94 (MQ=60)
ATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGG > SRR4302533.1098657/1‑94 (MQ=60)
TCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGG < SRR4302533.2948546/94‑1 (MQ=60)
CCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGT < SRR4302533.910346/94‑1 (MQ=60)
CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTG < SRR4302533.645379/94‑1 (MQ=60)
CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTG > SRR4302533.6196201/1‑94 (MQ=60)
CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTG < SRR4302533.1454178/94‑1 (MQ=60)
CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTG > SRR4302533.3362097/1‑94 (MQ=60)
CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTG > SRR4302533.3530226/1‑94 (MQ=60)
TTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGA > SRR4302533.5233108/1‑94 (MQ=60)
TAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATA > SRR4302533.2675343/1‑94 (MQ=60)
TAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATA > SRR4302533.781010/1‑94 (MQ=60)
TAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATA > SRR4302533.5082876/1‑94 (MQ=60)
AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAG < SRR4302533.1320787/94‑1 (MQ=60)
AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAG < SRR4302533.5334660/94‑1 (MQ=60)
AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAG > SRR4302533.2789617/1‑94 (MQ=60)
AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAG < SRR4302533.5504906/94‑1 (MQ=60)
ACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGT < SRR4302533.81223/94‑1 (MQ=60)
ACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGT > SRR4302533.2986016/1‑94 (MQ=60)
ACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGT > SRR4302533.776680/1‑94 (MQ=60)
CCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTA < SRR4302533.3492259/94‑1 (MQ=60)
CGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTAC < SRR4302533.104051/94‑1 (MQ=60)
CGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTAC < SRR4302533.5658981/94‑1 (MQ=60)
CGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACAC > SRR4302533.3866758/1‑94 (MQ=60)
CGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACAC > SRR4302533.6015986/1‑94 (MQ=60)
GATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATCGTACACT > SRR4302533.1067648/1‑94 (MQ=60)
GATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACT > SRR4302533.6335370/1‑94 (MQ=60)
GATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACT < SRR4302533.2330331/94‑1 (MQ=60)
ATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTT < SRR4302533.3049000/94‑1 (MQ=60)
TTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTTTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTT < SRR4302533.797158/94‑1 (MQ=60)
TTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTT > SRR4302533.5375625/1‑94 (MQ=60)
TTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTG < SRR4302533.3742774/94‑1 (MQ=60)
TTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTG > SRR4302533.4863713/1‑94 (MQ=60)
TTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTG > SRR4302533.5585382/1‑94 (MQ=60)
TCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGT < SRR4302533.2718877/94‑1 (MQ=60)
CAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTC > SRR4302533.2832376/1‑94 (MQ=60)
AATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCA > SRR4302533.4579587/1‑94 (MQ=60)
AATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCA > SRR4302533.1904139/1‑94 (MQ=60)
ATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAG < SRR4302533.1038806/94‑1 (MQ=60)
ATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAG < SRR4302533.3582372/94‑1 (MQ=60)
ATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAG < SRR4302533.2882208/94‑1 (MQ=60)
ATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAG < SRR4302533.4870913/94‑1 (MQ=60)
CACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTA > SRR4302533.5438898/1‑94 (MQ=60)
CACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGGCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTC > SRR4302533.717635/1‑94 (MQ=60)
CACGCTCAGGACGGCGAGCCATCCTCTCCTCAAAGGTCGCTTTTTTGATGCCACCGATTTGGCCGGTGTTGTGATAGTACACTTTGTCAGTACG < SRR4302533.3464376/94‑1 (MQ=60)
CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCGCCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACG > SRR4302533.3273849/1‑94 (MQ=60)
CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACG > SRR4302533.2255882/1‑94 (MQ=60)
CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACG < SRR4302533.2216410/94‑1 (MQ=60)
CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACG > SRR4302533.2099344/1‑94 (MQ=60)
ACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGC > SRR4302533.566901/1‑94 (MQ=60)
ACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGGACGC > SRR4302533.2917811/1‑94 (MQ=60)
CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCT < SRR4302533.229096/94‑1 (MQ=60)
CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCT > SRR4302533.159900/1‑94 (MQ=60)
CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCT > SRR4302533.1470813/1‑94 (MQ=60)
CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCT > SRR4302533.4210802/1‑94 (MQ=60)
CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCT > SRR4302533.1465317/1‑94 (MQ=60)
CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCT > SRR4302533.1372887/1‑94 (MQ=60)
GCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTCCACTTTGTCAGTACGCTT < SRR4302533.1953886/94‑1 (MQ=60)
GCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTT > SRR4302533.489608/1‑94 (MQ=60)
TCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGT > SRR4302533.4089801/1‑94 (MQ=60)
TCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGT > SRR4302533.1177922/1‑94 (MQ=60)
CAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTT < SRR4302533.1080343/94‑1 (MQ=60)
CAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTT < SRR4302533.483289/94‑1 (MQ=60)
CAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTT > SRR4302533.1935049/1‑94 (MQ=60)
AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG < SRR4302533.5351002/94‑1 (MQ=60)
AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG < SRR4302533.4695051/94‑1 (MQ=60)
ACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCG > SRR4302533.5899959/1‑94 (MQ=60)
GCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTT < SRR4302533.1187483/94‑1 (MQ=60)
GCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTT < SRR4302533.5003378/94‑1 (MQ=60)
CGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA < SRR4302533.4201550/94‑1 (MQ=60)
CGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA < SRR4302533.1863971/94‑1 (MQ=60)
GAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTAC < SRR4302533.3569954/94‑1 (MQ=60)
GCAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAG < SRR4302533.807603/94‑1 (MQ=60)
CAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGC < SRR4302533.3149728/94‑1 (MQ=60)
CAATCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGC > SRR4302533.6113492/1‑94 (MQ=60)
TCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAAC < SRR4302533.1600166/94‑1 (MQ=60)
TCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAAC > SRR4302533.704446/1‑94 (MQ=60)
TCATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAAC > SRR4302533.1750255/1‑94 (MQ=60)
CATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT > SRR4302533.4808498/1‑94 (MQ=60)
CATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT > SRR4302533.1096555/1‑94 (MQ=60)
CATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT < SRR4302533.425222/94‑1 (MQ=60)
ATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTT > SRR4302533.4705046/1‑94 (MQ=60)
ATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTT > SRR4302533.4274885/1‑94 (MQ=60)
ATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTT < SRR4302533.3098064/94‑1 (MQ=60)
ATCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTT < SRR4302533.3098063/94‑1 (MQ=60)
TCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTT < SRR4302533.4446745/94‑1 (MQ=60)
TCTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTT < SRR4302533.1913775/94‑1 (MQ=60)
CTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTG > SRR4302533.3226707/1‑94 (MQ=60)
CTCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTG < SRR4302533.4084574/94‑1 (MQ=60)
TCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGT > SRR4302533.3883781/1‑94 (MQ=60)
TCTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGT < SRR4302533.4478642/94‑1 (MQ=60)
CTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTC > SRR4302533.1625799/1‑94 (MQ=60)
CTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTC < SRR4302533.823293/94‑1 (MQ=60)
CTTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTC < SRR4302533.3493674/94‑1 (MQ=60)
TTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCA < SRR4302533.756727/94‑1 (MQ=60)
TTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCA > SRR4302533.5847082/1‑94 (MQ=60)
TTCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCA < SRR4302533.4238916/94‑1 (MQ=60)
TCAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGGACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAG > SRR4302533.2824197/1‑94 (MQ=60)
CAAAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGC > SRR4302533.2689680/1‑94 (MQ=60)
AAGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGT > SRR4302533.576553/1‑94 (MQ=60)
AGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTT > SRR4302533.2015410/1‑94 (MQ=60)
AGGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTT < SRR4302533.3792023/94‑1 (MQ=60)
GGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTC > SRR4302533.646571/1‑94 (MQ=60)
GGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTC > SRR4302533.2769264/1‑94 (MQ=60)
GGTCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTC > SRR4302533.5440398/1‑94 (MQ=60)
TCGCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAG > SRR4302533.3160036/1‑94 (MQ=60)
GCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAA < SRR4302533.4331386/94‑1 (MQ=60)
GCTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAA > SRR4302533.3809019/1‑94 (MQ=60)
CTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAAC > SRR4302533.858639/1‑94 (MQ=60)
CTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAAC > SRR4302533.3139803/1‑94 (MQ=60)
CTTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAAC > SRR4302533.5273390/1‑94 (MQ=60)
TTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACG < SRR4302533.1241977/94‑1 (MQ=60)
TTGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACG < SRR4302533.5573064/94‑1 (MQ=60)
TGTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGA > SRR4302533.4381846/1‑94 (MQ=60)
GTTTGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGAT > SRR4302533.1906067/1‑94 (MQ=60)
TGATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGAT < SRR4302533.3873343/94‑1 (MQ=60)
GATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATG < SRR4302533.3339822/94‑1 (MQ=60)
GATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATG < SRR4302533.1001403/94‑1 (MQ=60)
ATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGT > SRR4302533.4199600/1‑94 (MQ=60)
ATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGT > SRR4302533.2497273/1‑94 (MQ=60)
ATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGT < SRR4302533.5912417/94‑1 (MQ=60)
ATGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGT < SRR4302533.116160/94‑1 (MQ=60)
TGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTA < SRR4302533.4494351/94‑1 (MQ=60)
TGCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTA < SRR4302533.1405302/94‑1 (MQ=60)
GCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA > SRR4302533.1032966/1‑94 (MQ=60)
GCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA < SRR4302533.5349876/94‑1 (MQ=60)
GCCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA < SRR4302533.2980094/94‑1 (MQ=60)
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CAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA > NC_000913/3375945‑3376131
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |