Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,376,376	A→C	intergenic (‑90/+129)	rplM ← / ← yhcM	50S ribosomal subunit protein L13/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,376,376	0	A	C	96.1%	1435.8 / 28.1	459	intergenic (‑90/+129)	rplM/yhcM	50S ribosomal subunit protein L13/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (8/10); new base C (197/243); total (205/254)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 489 total aligned reads displayed.

TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG  >  NC_000913/3376286‑3376465

ttAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTccc                                                                                         >  1:4211270/1‑93 (MQ=255)

ttAAAAGCTTACCCAAAAAATAGTTCCAGGTGGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTccc                                                                                         <  2:8128042/93‑1 (MQ=255)

  aaaaGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCcccc                                                                                       <  2:8827489/93‑1 (MQ=255)

     aGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTc                                                                                    <  2:9212687/93‑1 (MQ=255)

      gCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCg                                                                                   >  2:7267607/1‑93 (MQ=255)

          aCCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATa                                                                               <  1:3804035/93‑1 (MQ=255)

           cccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAg                                                                              >  1:2091919/1‑93 (MQ=255)

            ccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGc                                                                             <  2:8628224/93‑1 (MQ=255)

             cAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGcc                                                                            >  1:5787865/1‑93 (MQ=255)

             cAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGcc                                                                            <  2:6176995/93‑1 (MQ=255)

              aataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCt                                                                           >  1:1001196/1‑93 (MQ=255)

              aataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCt                                                                           >  1:1651408/1‑93 (MQ=255)

              aataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCt                                                                           >  1:2410781/1‑93 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  2:8536812/93‑1 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCAAATAGCCTa                                                                          >  1:4429433/1‑93 (MQ=255)

               ataaataGTTACACGCTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          >  2:1007513/1‑93 (MQ=255)

                taaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTac                                                                         <  1:6519103/93‑2 (MQ=255)

                aaaataGTTTCACGTTGGTGAACACCCAAACGTCGTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTac                                                                         <  1:8391762/92‑2 (MQ=255)

                  aataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGc                                                                       <  2:9700925/93‑1 (MQ=255)

                    taGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCa                                                                     >  1:7532546/1‑93 (MQ=255)

                      gTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGc                                                                   >  1:3912051/1‑93 (MQ=255)

                       ttACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGca                                                                  >  1:924864/1‑93 (MQ=255)

                        tACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcac                                                                 >  2:9601033/1‑93 (MQ=255)

                        tACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcac                                                                 <  1:7676812/93‑1 (MQ=255)

                        tACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcac                                                                 >  2:124914/1‑93 (MQ=255)

                         acacGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcaca                                                                <  2:2573327/93‑1 (MQ=255)

                           acGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcacaca                                                              >  2:5741310/1‑93 (MQ=255)

                              ttGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaca                                                           >  2:6029855/1‑91 (MQ=255)

                              ttGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaa                                                           >  2:8265/1‑93 (MQ=255)

                              ttGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaa                                                           >  2:1422906/1‑93 (MQ=255)

                                   gAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGGCTACGCCAGCACACAAAAAGttt                                                      >  2:5496288/1‑93 (MQ=255)

                                   gAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGttt                                                      <  2:8013623/93‑1 (MQ=255)

                                      cacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg                                                   >  1:3136006/1‑93 (MQ=255)

                                      cacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg                                                   <  1:4643214/93‑1 (MQ=255)

                                      cacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg                                                   >  1:4857745/1‑93 (MQ=255)

                                          cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGcaa                                               >  2:3753530/1‑93 (MQ=255)

                                          cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa                                               <  2:9343980/93‑1 (MQ=255)

                                          cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGCTTTGGGaaa                                               >  1:524614/1‑93 (MQ=255)

                                           aaaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaa                                              <  2:153288/93‑1 (MQ=255)

                                            aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa                                             >  2:2276069/1‑93 (MQ=255)

                                            aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa                                             <  2:8337869/93‑1 (MQ=255)

                                               gTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAc                                          >  2:2659547/1‑93 (MQ=255)

                                               gTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAc                                          <  2:7648371/93‑1 (MQ=255)

                                                tCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACt                                         >  2:9844439/1‑93 (MQ=255)

                                                 cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACtt                                        <  1:3336369/93‑1 (MQ=255)

                                                 cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACtt                                        >  2:5917986/1‑93 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       >  2:3500756/1‑93 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       <  1:4041020/93‑1 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       <  2:4750408/93‑1 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       <  2:1840164/93‑1 (MQ=255)

                                                   tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc                                      >  1:9726174/1‑93 (MQ=255)

                                                   tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc                                      <  2:2865384/93‑1 (MQ=255)

                                                    cAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCt                                     <  2:6613656/93‑1 (MQ=255)

                                                    cAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCt                                     >  1:1353638/1‑93 (MQ=255)

                                                    cAATTGTTGAGGCTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCt                                     <  2:5826027/93‑1 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    >  2:6774483/1‑93 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    <  1:3635301/93‑1 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    <  1:2676847/93‑1 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    <  1:7095594/93‑1 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    >  2:3093024/1‑93 (MQ=255)

                                                      aTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTg                                   <  2:8387980/93‑1 (MQ=255)

                                                        tgttgAGGTTCACACGACAAAGTCCGGCAAACCTTCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTa                                 <  1:9946205/93‑1 (MQ=255)

                                                        tgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTa                                 <  1:6006142/93‑1 (MQ=255)

                                                        tgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTa                                 <  1:8785934/93‑1 (MQ=255)

                                                         gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                >  1:805571/1‑93 (MQ=255)

                                                          ttgAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAc                               <  2:4681118/93‑1 (MQ=255)

                                                            gAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGt                             >  1:7887044/1‑93 (MQ=255)

                                                              ggTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgg                           <  1:9511699/93‑1 (MQ=255)

                                                              ggTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgg                           <  1:2159446/93‑1 (MQ=255)

                                                              ggTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgg                           >  1:9386070/1‑93 (MQ=255)

                                                               gTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTggg                          <  2:3967086/93‑1 (MQ=255)

                                                                ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                         >  2:7693471/1‑93 (MQ=255)

                                                                ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                         >  1:8461715/1‑93 (MQ=255)

                                                                ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                         >  1:6269188/1‑93 (MQ=255)

                                                                 tCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGt                        <  1:8243694/93‑1 (MQ=255)

                                                                 tCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGt                        <  1:5500760/93‑1 (MQ=255)

                                                                     acGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCa                    <  2:6992314/93‑1 (MQ=255)

                                                                     acGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCa                    >  2:9934142/1‑93 (MQ=255)

                                                                        aCAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGa                 >  2:5603380/1‑93 (MQ=255)

                                                                        aCAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGa                 >  1:8878236/1‑93 (MQ=255)

                                                                          aaaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAtt               <  1:1059410/93‑1 (MQ=255)

                                                                          aaaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGGCGCAGGAtt               >  2:4150057/1‑93 (MQ=255)

                                                                          aaaGTCCGGCAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAtt               >  1:8175419/1‑93 (MQ=255)

                                                                           aaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATta              >  1:2780336/1‑93 (MQ=255)

                                                                           aaGGCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATta              <  1:8578188/93‑1 (MQ=255)

                                                                              tCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATag           <  1:5114360/93‑1 (MQ=255)

                                                                              tCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATag           <  2:5292547/93‑1 (MQ=255)

                                                                               ccGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATaga          <  1:6678650/93‑1 (MQ=255)

                                                                               ccGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATaga          <  2:7465816/93‑1 (MQ=255)

                                                                                cGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATagag         <  2:4517355/93‑1 (MQ=255)

                                                                                  gCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGaa       <  2:2134817/93‑1 (MQ=255)

                                                                                  gCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGaa       >  2:5005188/1‑93 (MQ=255)

                                                                                  gCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGaa       <  2:3400658/93‑1 (MQ=255)

                                                                                  gCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGaa       >  1:2734872/1‑93 (MQ=255)

                                                                                  gCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGaa       <  1:1862206/93‑1 (MQ=255)

                                                                                  gCAAACCGTCGCCTTCGAATAGCCAACGCCAGCACACAAAAAGTTTTGGAAAAAAAACTTTCTTGTAACGTGGGGTCGTAAGATTATAGaaaa       <  2:24185/93‑1 (MQ=255)

                                                                                    aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt     >  2:2015828/1‑93 (MQ=255)

                                                                                    aaaCCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAgc     >  1:9085354/1‑92 (MQ=255)

                                                                                       ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCgg  <  1:6844098/93‑1 (MQ=255)

                                                                                       ccTACCCCTTCAAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCgg  <  1:7205516/93‑1 (MQ=255)

TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG  >  NC_000913/3376286‑3376465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 243 total aligned reads displayed.

ATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC  >  NC_000913/3376285‑3376469

ATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCC                                                                                             <  SRR4302540.8161194/94‑1 (MQ=60)

ATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCC                                                                                             <  SRR4302540.8382883/94‑1 (MQ=60)

ATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTAAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCC                                                                                             <  SRR4302540.4779585/94‑1 (MQ=60)

 TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCC                                                                                            <  SRR4302540.7498140/94‑1 (MQ=60)

  TAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCC                                                                                           >  SRR4302540.6615058/1‑94 (MQ=60)

   AAAAGCTTCCCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCT                                                                                          <  SRR4302540.2121866/94‑1 (MQ=60)

    AAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTT                                                                                         >  SRR4302540.9603009/1‑94 (MQ=60)

    AAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTT                                                                                         >  SRR4302540.2711715/1‑94 (MQ=60)

     AAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTC                                                                                        >  SRR4302540.2960244/1‑94 (MQ=60)

     AAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTC                                                                                        <  SRR4302540.1808104/94‑1 (MQ=60)

      AGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCG                                                                                       >  SRR4302540.7881461/1‑94 (MQ=60)

       GCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGA                                                                                      <  SRR4302540.6768886/94‑1 (MQ=60)

       GCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGA                                                                                      >  SRR4302540.402495/1‑94 (MQ=60)

         TTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAT                                                                                    >  SRR4302540.5212873/1‑94 (MQ=60)

         TTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAT                                                                                    >  SRR4302540.8852291/1‑94 (MQ=60)

         TTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAT                                                                                    >  SRR4302540.4400853/1‑94 (MQ=60)

         TTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAT                                                                                    <  SRR4302540.9288268/94‑1 (MQ=60)

           ACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAG                                                                                  >  SRR4302540.81039/1‑94 (MQ=60)

           ACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAG                                                                                  >  SRR4302540.2114382/1‑94 (MQ=60)

           ACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAG                                                                                  >  SRR4302540.9745314/1‑94 (MQ=60)

           ACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAG                                                                                  <  SRR4302540.3845469/94‑1 (MQ=60)

            CCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGC                                                                                 >  SRR4302540.5267924/1‑94 (MQ=60)

             CCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCC                                                                                >  SRR4302540.1490142/1‑94 (MQ=60)

             CCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCC                                                                                >  SRR4302540.5851813/1‑94 (MQ=60)

             CCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCAACCGACAAAGGCGGGCAAAACTCCCCCTTCGATTATCC                                                                                >  SRR4302540.2144495/1‑94 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               >  SRR4302540.4361295/1‑94 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               >  SRR4302540.3676850/1‑94 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               >  SRR4302540.1011367/1‑94 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               >  SRR4302540.9465913/1‑94 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               <  SRR4302540.8175869/94‑1 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               >  SRR4302540.1673783/1‑94 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               <  SRR4302540.8578875/94‑1 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT                                                                               <  SRR4302540.9218321/94‑1 (MQ=60)

              CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCT                                                                               >  SRR4302540.2436770/1‑94 (MQ=60)

               AATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTA                                                                              >  SRR4302540.7400516/1‑94 (MQ=60)

               AATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTA                                                                              >  SRR4302540.195053/1‑94 (MQ=60)

               AATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCAAATAGCCTA                                                                              >  SRR4302540.4477427/1‑94 (MQ=60)

                ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC                                                                             <  SRR4302540.10115955/94‑1 (MQ=60)

                 TAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACG                                                                            <  SRR4302540.567352/94‑1 (MQ=60)

                 TAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACG                                                                            <  SRR4302540.8952074/94‑1 (MQ=60)

                 AAAATAGTTTCACGTTGGTGAACACCCAAACGTCGTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACG                                                                            <  SRR4302540.8489149/94‑1 (MQ=60)

                  AAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGC                                                                           >  SRR4302540.6916953/1‑94 (MQ=60)

                  AAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGC                                                                           >  SRR4302540.6066976/1‑94 (MQ=60)

                  AAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGC                                                                           <  SRR4302540.7001058/94‑1 (MQ=60)

                   AATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCC                                                                          <  SRR4302540.3975754/94‑1 (MQ=60)

                    ATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCA                                                                         >  SRR4302540.7616890/1‑94 (MQ=60)

                     TAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTGCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAG                                                                        <  SRR4302540.9917118/94‑1 (MQ=60)

                     AAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAG                                                                        <  SRR4302540.8857005/94‑1 (MQ=60)

                      AGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTTCGCCAGC                                                                       <  SRR4302540.1341814/94‑1 (MQ=60)

                      AGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGC                                                                       <  SRR4302540.9124561/94‑1 (MQ=60)

                      AGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGC                                                                       >  SRR4302540.3954435/1‑94 (MQ=60)

                       GTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCA                                                                      <  SRR4302540.6437132/94‑1 (MQ=60)

                       GTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCA                                                                      >  SRR4302540.934609/1‑94 (MQ=60)

                        TTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCAC                                                                     <  SRR4302540.7639599/94‑1 (MQ=60)

                        TTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCAC                                                                     <  SRR4302540.9478331/94‑1 (MQ=60)

                        GTACACGTTGGTGAACACCCAAACCTCGTCAATTGGTGAGGTGCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCAC                                                                     <  SRR4302540.7639598/94‑1 (MQ=60)

                         TACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACA                                                                    >  SRR4302540.7192536/1‑94 (MQ=60)

                         TACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACA                                                                    <  SRR4302540.7763587/94‑1 (MQ=60)

                          ACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACAC                                                                   <  SRR4302540.7982749/94‑1 (MQ=60)

                          ACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACAC                                                                   >  SRR4302540.2816729/1‑94 (MQ=60)

                           CACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACA                                                                  >  SRR4302540.5985912/1‑94 (MQ=60)

                           CACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACA                                                                  <  SRR4302540.1381009/94‑1 (MQ=60)

                           CACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACA                                                                  >  SRR4302540.4372218/1‑94 (MQ=60)

                            ACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAA                                                                 <  SRR4302540.833813/94‑1 (MQ=60)

                            ACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCACCCTTCGAATAGCCTACGCCAGCACACAA                                                                 <  SRR4302540.8906441/94‑1 (MQ=60)

                             CGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAA                                                                <  SRR4302540.1216306/94‑1 (MQ=60)

                              GTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAA                                                               >  SRR4302540.8466929/1‑94 (MQ=60)

                              GTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAA                                                               >  SRR4302540.4775476/1‑94 (MQ=60)

                               TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAA                                                              <  SRR4302540.8348212/94‑1 (MQ=60)

                               GTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAA                                                              <  SRR4302540.2844389/94‑1 (MQ=60)

                                TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG                                                             >  SRR4302540.5637896/1‑94 (MQ=60)

                                TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG                                                             <  SRR4302540.410721/94‑1 (MQ=60)

                                 GGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGT                                                            <  SRR4302540.8965316/94‑1 (MQ=60)

                                 GGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGT                                                            <  SRR4302540.1726821/94‑1 (MQ=60)

                                 GGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGT                                                            <  SRR4302540.1974451/94‑1 (MQ=60)

                                  GTGATCACCCAAACGTCTTTAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTT                                                           <  SRR4302540.2147077/94‑1 (MQ=60)

                                   TGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTT                                                          <  SRR4302540.829721/94‑1 (MQ=60)

                                   TGAACACCCAAACGTCGTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTT                                                          <  SRR4302540.2669061/94‑1 (MQ=60)

                                    GAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTT                                                         >  SRR4302540.7281828/1‑94 (MQ=60)

                                     AACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTG                                                        <  SRR4302540.8285193/94‑1 (MQ=60)

                                      ACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGG                                                       >  SRR4302540.4909822/1‑94 (MQ=60)

                                      ACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGG                                                       >  SRR4302540.4909823/1‑94 (MQ=60)

                                      ACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGG                                                       >  SRR4302540.3170213/1‑94 (MQ=60)

                                       CACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGG                                                      <  SRR4302540.4692923/94‑1 (MQ=60)

                                       CACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGG                                                      <  SRR4302540.3388079/94‑1 (MQ=60)

                                        ACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGA                                                     >  SRR4302540.4726550/1‑94 (MQ=60)

                                        ACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGA                                                     >  SRR4302540.2420537/1‑94 (MQ=60)

                                         CCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAA                                                    <  SRR4302540.5132568/94‑1 (MQ=60)

                                          CCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAA                                                   <  SRR4302540.6528621/94‑1 (MQ=60)

                                          CCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAA                                                   <  SRR4302540.8084242/94‑1 (MQ=60)

                                          CCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAA                                                   <  SRR4302540.6851949/94‑1 (MQ=60)

                                          CCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGCTTTGGGAAA                                                   >  SRR4302540.530274/1‑94 (MQ=60)

                                           CAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAA                                                  <  SRR4302540.4145614/94‑1 (MQ=60)

                                           CAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAA                                                  <  SRR4302540.6703726/94‑1 (MQ=60)

                                            AAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAA                                                 >  SRR4302540.950432/1‑94 (MQ=60)

                                             AACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAA                                                >  SRR4302540.7152977/1‑94 (MQ=60)

                                              ACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAA                                               <  SRR4302540.40391/94‑1 (MQ=60)

                                               CGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAT                                              >  SRR4302540.8215469/1‑94 (MQ=60)

                                               CGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAC                                              <  SRR4302540.9163658/94‑1 (MQ=60)

                                               CGTCTTCAAGTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAC                                              <  SRR4302540.4454955/94‑1 (MQ=60)

                                               CGGCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAC                                              <  SRR4302540.9163659/94‑1 (MQ=60)

                                                GTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACT                                             >  SRR4302540.1130337/1‑94 (MQ=60)

                                                 TCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTT                                            <  SRR4302540.2708648/94‑1 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGACTAGCCTACGCCCGCACACAACACGTTTTGGGACAAAAACTTT                                           >  SRR4302540.8534556/1‑94 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT                                           <  SRR4302540.2542986/94‑1 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT                                           <  SRR4302540.8242800/94‑1 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT                                           >  SRR4302540.8534559/1‑94 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT                                           <  SRR4302540.3373007/94‑1 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT                                           >  SRR4302540.325800/1‑94 (MQ=60)

                                                  CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT                                           >  SRR4302540.6124703/1‑94 (MQ=60)

                                                   TTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTC                                          >  SRR4302540.9840411/1‑94 (MQ=60)

                                                    TCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCT                                         >  SRR4302540.1367886/1‑94 (MQ=60)

                                                    TCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCT                                         >  SRR4302540.931625/1‑94 (MQ=60)

                                                     CAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTT                                        <  SRR4302540.5725507/94‑1 (MQ=60)

                                                     CAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTT                                        <  SRR4302540.3903629/94‑1 (MQ=60)

                                                      AATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTG                                       <  SRR4302540.2705820/94‑1 (MQ=60)

                                                      AATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTG                                       <  SRR4302540.7174556/94‑1 (MQ=60)

                                                      AATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTG                                       <  SRR4302540.3675096/94‑1 (MQ=60)

                                                       ATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGT                                      <  SRR4302540.6975782/94‑1 (MQ=60)

                                                        TTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTA                                     <  SRR4302540.3881109/94‑1 (MQ=60)

                                                         TGTTGAGGTTCACACGACAAAGTCCGGCAAACCTTCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAA                                    <  SRR4302540.10062344/94‑1 (MQ=60)

                                                         TGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAA                                    <  SRR4302540.8887615/94‑1 (MQ=60)

                                                         TGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAA                                    <  SRR4302540.5226780/94‑1 (MQ=60)

                                                          GTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAC                                   <  SRR4302540.9916912/94‑1 (MQ=60)

                                                          GTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAC                                   <  SRR4302540.7386281/94‑1 (MQ=60)

                                                          GTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAC                                   <  SRR4302540.3773881/94‑1 (MQ=60)

                                                          GTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAC                                   >  SRR4302540.8026639/1‑94 (MQ=60)

                                                          GTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAC                                   >  SRR4302540.609374/1‑94 (MQ=60)

                                                           TTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACG                                  <  SRR4302540.5858440/94‑1 (MQ=60)

                                                            TGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGT                                 <  SRR4302540.2458358/94‑1 (MQ=60)

                                                            TGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGT                                 <  SRR4302540.3540756/94‑1 (MQ=60)

                                                            TGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGT                                 >  SRR4302540.7979112/1‑94 (MQ=60)

                                                             GAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTG                                >  SRR4302540.5552151/1‑94 (MQ=60)

                                                             GAGGTGCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTG                                <  SRR4302540.8329525/94‑1 (MQ=60)

                                                              AGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGG                               <  SRR4302540.2738172/94‑1 (MQ=60)

                                                              AGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGG                               >  SRR4302540.9497788/1‑94 (MQ=60)

                                                              AGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGG                               >  SRR4302540.6638660/1‑94 (MQ=60)

                                                              AGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGG‑AAAAAACTTTCTTGTAACGTGGG                              <  SRR4302540.10154296/94‑1 (MQ=60)

                                                               GGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG                              >  SRR4302540.6114569/1‑94 (MQ=60)

                                                               GGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG                              <  SRR4302540.2182700/94‑1 (MQ=60)

                                                               GGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG                              <  SRR4302540.9624363/94‑1 (MQ=60)

                                                               GGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG                              <  SRR4302540.2786281/94‑1 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAACGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             >  SRR4302540.9782789/1‑94 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             >  SRR4302540.6338939/1‑94 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             <  SRR4302540.1587610/94‑1 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             <  SRR4302540.2801715/94‑1 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             <  SRR4302540.2010323/94‑1 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             >  SRR4302540.6338940/1‑94 (MQ=60)

                                                                GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG                             >  SRR4302540.8559969/1‑94 (MQ=60)

                                                                  TCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAACCTTTCTTGTAACGTGGGGTC                           <  SRR4302540.8339507/94‑1 (MQ=60)

                                                                  TCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTC                           <  SRR4302540.5561333/94‑1 (MQ=60)

                                                                  TCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTC                           <  SRR4302540.8526115/94‑1 (MQ=60)

                                                                  TCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTC                           >  SRR4302540.7703409/1‑94 (MQ=60)

                                                                   CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG                          <  SRR4302540.4643652/94‑1 (MQ=60)

                                                                   CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG                          <  SRR4302540.4643651/94‑1 (MQ=60)

                                                                   CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG                          <  SRR4302540.2792064/94‑1 (MQ=60)

                                                                   CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG                          <  SRR4302540.4217202/94‑1 (MQ=60)

                                                                   CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG                          <  SRR4302540.3223020/94‑1 (MQ=60)

                                                                    ACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGC                         >  SRR4302540.9753325/1‑94 (MQ=60)

                                                                      ACGACAAAGTCCGGCACACCCCCCCCTTCGAATAGCCTACGCCAGCACACAAGAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAG                       <  SRR4302540.8846096/94‑1 (MQ=60)

                                                                      ACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAG                       <  SRR4302540.1681245/94‑1 (MQ=60)

                                                                       CGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGG                      <  SRR4302540.721980/94‑1 (MQ=60)

                                                                        GACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGA                     >  SRR4302540.8980978/1‑94 (MQ=60)

                                                                        GACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGA                     >  SRR4302540.9913023/1‑94 (MQ=60)

                                                                         ACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAT                    >  SRR4302540.3212620/1‑94 (MQ=60)

                                                                          CAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATT                   <  SRR4302540.3927953/94‑1 (MQ=60)

                                                                          CAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATT                   >  SRR4302540.8270378/1‑94 (MQ=60)

                                                                           AAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTA                  <  SRR4302540.1070194/94‑1 (MQ=60)

                                                                           AAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTA                  <  SRR4302540.3663633/94‑1 (MQ=60)

                                                                           AAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTA                  >  SRR4302540.2367363/1‑94 (MQ=60)

                                                                            AAGGCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTAT                 <  SRR4302540.8677893/94‑1 (MQ=60)

                                                                             AGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATA                <  SRR4302540.10129981/94‑1 (MQ=60)

                                                                             AGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATA                >  SRR4302540.2252336/1‑94 (MQ=60)

                                                                             AGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATA                <  SRR4302540.7939700/94‑1 (MQ=60)

                                                                              GTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAG               <  SRR4302540.7769299/94‑1 (MQ=60)

                                                                               TCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGA              <  SRR4302540.5169724/94‑1 (MQ=60)

                                                                               TCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGA              <  SRR4302540.3821890/94‑1 (MQ=60)

                                                                                CCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAG             >  SRR4302540.6033288/1‑94 (MQ=60)

                                                                                CCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAG             <  SRR4302540.6752421/94‑1 (MQ=60)

                                                                                CCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAG             <  SRR4302540.6555432/94‑1 (MQ=60)

                                                                                CCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTCGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAG             >  SRR4302540.5154343/1‑94 (MQ=60)

                                                                                 CGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGA            <  SRR4302540.4734723/94‑1 (MQ=60)

                                                                                  GGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAA           >  SRR4302540.4112241/1‑94 (MQ=60)

                                                                                  GGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAA           >  SRR4302540.2764392/1‑94 (MQ=60)

                                                                                   GCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAG          <  SRR4302540.1882624/94‑1 (MQ=60)

                                                                                   GCAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAG          <  SRR4302540.1648504/94‑1 (MQ=60)

                                                                                    CAAACCTACCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGC         >  SRR4302540.9194508/1‑94 (MQ=60)

                                                                                     AAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTC        <  SRR4302540.5347912/94‑1 (MQ=60)

                                                                                      AGCCTCCCCCTTCGAAGAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCG       <  SRR4302540.3140896/94‑1 (MQ=60)

                                                                                      AACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCG       <  SRR4302540.9461289/94‑1 (MQ=60)

                                                                                      AACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCG       <  SRR4302540.8677739/94‑1 (MQ=60)

                                                                                       ACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG      >  SRR4302540.8654416/1‑94 (MQ=60)

                                                                                        CCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGG     <  SRR4302540.5465134/94‑1 (MQ=60)

                                                                                        CCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGG     <  SRR4302540.6919916/94‑1 (MQ=60)

                                                                                        CCTACCCCTTCAAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGG     <  SRR4302540.7285844/94‑1 (MQ=60)

                                                                                         CTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGG    >  SRR4302540.9176485/1‑94 (MQ=60)

                                                                                         CTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGG    <  SRR4302540.8717999/94‑1 (MQ=60)

                                                                                          TCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGT   <  SRR4302540.608769/94‑1 (MQ=60)

                                                                                           CCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC  <  SRR4302540.8894807/94‑1 (MQ=60)

                                                                                           CCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC  >  SRR4302540.6606390/1‑94 (MQ=60)

ATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC  >  NC_000913/3376285‑3376469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`