Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,376,376 |
A→C |
intergenic (‑90/+129) |
rplM ← / ← yhcM |
50S ribosomal subunit protein L13/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,376,376 | 0 | A | C | 100.0%
| 792.6
/ NA
| 246 | intergenic (‑90/+129) | rplM/yhcM | 50S ribosomal subunit protein L13/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (125/121); total (125/121) |
Only 100 of 257 total aligned reads displayed.
TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG > NC_000913/3376286‑3376465
|
aaaaGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCcccc > 2:2457824/1‑93 (MQ=255)
aaGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCtt < 2:2523670/93‑1 (MQ=255)
gCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCg > 2:5449399/1‑93 (MQ=255)
cTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGa < 1:2548567/93‑1 (MQ=255)
tACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAt < 1:5535726/93‑1 (MQ=255)
tACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAt > 2:3781537/1‑93 (MQ=255)
cccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAg < 2:4713089/93‑1 (MQ=255)
ccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCACACCTCCCCCTTCGAATAGc > 2:965423/1‑93 (MQ=255)
ccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGc < 1:4999814/93‑1 (MQ=255)
cAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGcc > 1:90809/1‑93 (MQ=255)
cAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGcc < 1:2221273/93‑1 (MQ=255)
aataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAAACTCCCCCTTCGAATAGCCt > 1:5883963/1‑93 (MQ=255)
ataaataGTTTCACGTTGGCGAACACCCAACCGTCTTCAATTGTTGAGGTCCCCACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa < 2:212666/93‑1 (MQ=255)
ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa < 1:276734/93‑1 (MQ=255)
ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa < 2:79380/93‑1 (MQ=255)
ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa < 2:188748/93‑1 (MQ=255)
ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa < 1:4708775/93‑1 (MQ=255)
ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa < 1:3869659/93‑1 (MQ=255)
taaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTac > 2:5645861/1‑92 (MQ=255)
taaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTac < 2:1784546/93‑2 (MQ=255)
aaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTacg > 2:6180785/1‑91 (MQ=255)
aataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGc > 2:4391774/1‑93 (MQ=255)
ataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGcc < 2:1117590/93‑1 (MQ=255)
ataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGcc > 2:5566089/1‑93 (MQ=255)
taGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCa < 1:2919481/93‑1 (MQ=255)
taGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCa > 2:4533422/1‑93 (MQ=255)
aGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACCCGACAAAGTCCGGAAAACCTACCCCCTCGAATAGCCTACGCCAg > 2:1207881/1‑93 (MQ=255)
gTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGc > 2:3625698/1‑93 (MQ=255)
acacGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcaca > 2:4828562/1‑93 (MQ=255)
acGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcacaca < 1:3041895/93‑1 (MQ=255)
gTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaa > 2:240412/1‑93 (MQ=255)
ttGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaa < 1:4126851/93‑1 (MQ=255)
tGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaaa > 2:2219729/1‑93 (MQ=255)
tGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAACCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGtt < 1:1877090/93‑1 (MQ=255)
tGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGtt < 1:2196303/93‑1 (MQ=255)
acacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTg > 1:3574551/1‑93 (MQ=255)
cacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg > 1:117915/1‑93 (MQ=255)
cccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGa > 2:4257733/1‑93 (MQ=255)
cccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGa > 1:108700/1‑93 (MQ=255)
ccgaaCGTCATCAAGTGGTTGGGCTTAAACGGCCAAGTCCCGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaa < 2:2007897/90‑1 (MQ=255)
ccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaa > 2:1395201/1‑93 (MQ=255)
cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa > 1:4357019/1‑93 (MQ=255)
cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa > 2:5581702/1‑93 (MQ=255)
aaaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaa < 2:3504560/93‑1 (MQ=255)
aaaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaa > 1:5200931/1‑93 (MQ=255)
aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa > 2:3842498/1‑93 (MQ=255)
aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGACAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa < 1:3710364/93‑1 (MQ=255)
aCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaa > 1:3797677/1‑93 (MQ=255)
cGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaaa < 2:4216893/93‑1 (MQ=255)
cGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaaa < 2:285426/93‑1 (MQ=255)
gTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAc < 1:2481332/93‑1 (MQ=255)
cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTAGGAAAAAAACtt < 1:4792048/93‑1 (MQ=255)
ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt > 2:3042283/1‑93 (MQ=255)
ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt < 2:5734903/93‑1 (MQ=255)
ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGACTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt > 2:1057644/1‑93 (MQ=255)
ctCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt < 2:1616004/92‑1 (MQ=255)
tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc > 2:1456120/1‑93 (MQ=255)
tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc < 2:5864504/93‑1 (MQ=255)
cAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCt < 2:4965771/93‑1 (MQ=255)
aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt < 1:458336/93‑1 (MQ=255)
aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt > 2:6272127/1‑93 (MQ=255)
aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt > 1:5835621/1‑93 (MQ=255)
aTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTg < 1:1322990/93‑1 (MQ=255)
aTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTg < 1:711807/93‑1 (MQ=255)
ttgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGt < 1:4073298/93‑1 (MQ=255)
ttgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGt < 1:5297065/93‑1 (MQ=255)
gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa < 2:5281814/93‑1 (MQ=255)
gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa < 2:1505416/93‑1 (MQ=255)
gttgAGGTGCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa < 2:1092197/93‑1 (MQ=255)
ttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAc < 2:5180291/93‑1 (MQ=255)
tgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACg > 1:1498197/1‑93 (MQ=255)
gAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGt < 2:3164591/93‑1 (MQ=255)
gAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGt > 2:4676303/1‑93 (MQ=255)
ggTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgg > 2:866776/1‑93 (MQ=255)
gTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTggg > 1:1074673/1‑93 (MQ=255)
gTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTggg > 2:4062899/1‑93 (MQ=255)
ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg < 2:648747/93‑1 (MQ=255)
cacaCGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTc < 1:6131032/93‑1 (MQ=255)
acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg < 2:3918421/93‑1 (MQ=255)
acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg > 2:4766912/1‑93 (MQ=255)
cGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAg > 2:3356136/1‑93 (MQ=255)
cGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAg > 1:3931356/1‑93 (MQ=255)
aCAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGa > 2:5108593/1‑93 (MQ=255)
cAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAt < 1:6019684/93‑1 (MQ=255)
cAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAt > 1:3231904/1‑93 (MQ=255)
aaaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCCCAGGAtt > 1:1710395/1‑93 (MQ=255)
aaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATta < 1:5434725/93‑1 (MQ=255)
aaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATta < 2:6071305/93‑1 (MQ=255)
aGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATtat < 1:3454088/93‑1 (MQ=255)
gTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATtata < 1:1973397/93‑1 (MQ=255)
tCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATag > 2:2570158/1‑93 (MQ=255)
ccGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATaga < 1:3199864/93‑1 (MQ=255)
ggCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAgaga > 1:5119110/1‑93 (MQ=255)
aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt > 2:1683010/1‑93 (MQ=255)
aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt > 2:3320218/1‑93 (MQ=255)
aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt < 1:3433604/93‑1 (MQ=255)
aaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTc < 2:1310322/93‑1 (MQ=255)
aCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCg < 1:5576002/93‑1 (MQ=255)
ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTTGGGTCGCAGGATTATAGAGAAGTCgg > 1:4527017/1‑93 (MQ=255)
ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCgg < 1:1575334/93‑1 (MQ=255)
|
TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG > NC_000913/3376286‑3376465
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC > NC_000913/3376284‑3376469
|
CATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCC > SRR4302533.658703/1‑94 (MQ=60)
AAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCT > SRR4302533.3499655/1‑94 (MQ=60)
AAAACCTTCCCCAAT‑AATAGGTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTT < SRR4302533.2968807/94‑1 (MQ=60)
AAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTT > SRR4302533.4657195/1‑94 (MQ=60)
AGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCG > SRR4302533.5782521/1‑94 (MQ=60)
AGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCG > SRR4302533.3230406/1‑94 (MQ=60)
CTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAA > SRR4302533.4603505/1‑94 (MQ=60)
CTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAA > SRR4302533.6108202/1‑94 (MQ=60)
CTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAA < SRR4302533.2564255/94‑1 (MQ=60)
TTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAT > SRR4302533.2831915/1‑94 (MQ=60)
TACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATA < SRR4302533.5569150/94‑1 (MQ=60)
CCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGC > SRR4302533.1571873/1‑94 (MQ=60)
CCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCC > SRR4302533.91383/1‑94 (MQ=60)
CCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCC < SRR4302533.5030121/94‑1 (MQ=60)
CCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCC > SRR4302533.2551681/1‑94 (MQ=60)
CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT < SRR4302533.2234988/94‑1 (MQ=60)
CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT > SRR4302533.1853951/1‑94 (MQ=60)
CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCT < SRR4302533.5058565/94‑1 (MQ=60)
CAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAAACTCCCCCTTCGAATAGCCT > SRR4302533.5919522/1‑94 (MQ=60)
AATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTA > SRR4302533.3848983/1‑94 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC < SRR4302533.3893283/94‑1 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC < SRR4302533.4737314/94‑1 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC > SRR4302533.558848/1‑94 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC < SRR4302533.278419/94‑1 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC > SRR4302533.603702/1‑94 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC < SRR4302533.772102/94‑1 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC < SRR4302533.972249/94‑1 (MQ=60)
ATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTAC < SRR4302533.2224799/94‑1 (MQ=60)
TAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACG > SRR4302533.372553/1‑94 (MQ=60)
TAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACG > SRR4302533.4367634/1‑94 (MQ=60)
ATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCA < SRR4302533.4019278/94‑1 (MQ=60)
TAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAG < SRR4302533.2937369/94‑1 (MQ=60)
TACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACA > SRR4302533.6308195/1‑94 (MQ=60)
ACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACAC < SRR4302533.5883880/94‑1 (MQ=60)
CACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTACGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACA > SRR4302533.3180821/1‑94 (MQ=60)
ACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAA < SRR4302533.2626651/94‑1 (MQ=60)
ACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAA < SRR4302533.1501173/94‑1 (MQ=60)
ACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAA < SRR4302533.3060515/94‑1 (MQ=60)
GTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAA < SRR4302533.5510699/94‑1 (MQ=60)
TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAA < SRR4302533.4151903/94‑1 (MQ=60)
TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAA > SRR4302533.4610258/1‑94 (MQ=60)
TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG < SRR4302533.342168/94‑1 (MQ=60)
TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG > SRR4302533.1129441/1‑94 (MQ=60)
TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG < SRR4302533.5202774/94‑1 (MQ=60)
TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG < SRR4302533.1293595/94‑1 (MQ=60)
TGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAG > SRR4302533.1089011/1‑94 (MQ=60)
GTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTT < SRR4302533.317994/94‑1 (MQ=60)
TGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAACCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTT < SRR4302533.1888530/94‑1 (MQ=60)
TGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTT < SRR4302533.2188492/94‑1 (MQ=60)
TGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTT < SRR4302533.2209837/94‑1 (MQ=60)
AACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTG > SRR4302533.3596583/1‑94 (MQ=60)
ACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGG > SRR4302533.1944116/1‑94 (MQ=60)
ACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGG > SRR4302533.3774668/1‑94 (MQ=60)
ACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGG > SRR4302533.118664/1‑94 (MQ=60)
CATCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGG < SRR4302533.5942616/94‑1 (MQ=60)
ACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGA > SRR4302533.4021536/1‑94 (MQ=60)
ACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGA > SRR4302533.109386/1‑94 (MQ=60)
CCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAA > SRR4302533.80326/1‑94 (MQ=60)
CCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAA > SRR4302533.4383318/1‑94 (MQ=60)
CCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAA > SRR4302533.3779584/1‑94 (MQ=60)
CAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAA > SRR4302533.5232281/1‑94 (MQ=60)
AACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAA > SRR4302533.3820924/1‑94 (MQ=60)
AACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGACAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAA < SRR4302533.3733152/94‑1 (MQ=60)
CGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAC < SRR4302533.411079/94‑1 (MQ=60)
GTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACT < SRR4302533.2496636/94‑1 (MQ=60)
TCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTT > SRR4302533.4533325/1‑94 (MQ=60)
CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTAGGAAAAAAACTTT < SRR4302533.4821084/94‑1 (MQ=60)
CTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTNCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTT < SRR4302533.1479332/94‑1 (MQ=60)
CAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTT > SRR4302533.5452743/1‑94 (MQ=60)
CAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTT > SRR4302533.5870883/1‑94 (MQ=60)
CAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTT > SRR4302533.1899788/1‑94 (MQ=60)
AATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTG < SRR4302533.461077/94‑1 (MQ=60)
ATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGT < SRR4302533.1121242/94‑1 (MQ=60)
ATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGT < SRR4302533.1330927/94‑1 (MQ=60)
ATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGT < SRR4302533.5346559/94‑1 (MQ=60)
ATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGT < SRR4302533.716010/94‑1 (MQ=60)
TTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTA < SRR4302533.5328790/94‑1 (MQ=60)
TTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTA < SRR4302533.4098095/94‑1 (MQ=60)
TGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAA < SRR4302533.3486455/94‑1 (MQ=60)
TTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACG > SRR4302533.1507224/1‑94 (MQ=60)
AGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGG < SRR4302533.708065/94‑1 (MQ=60)
AGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGG > SRR4302533.1622982/1‑94 (MQ=60)
GGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG > SRR4302533.491745/1‑94 (MQ=60)
GGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG > SRR4302533.1081008/1‑94 (MQ=60)
GGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGG < SRR4302533.2685102/94‑1 (MQ=60)
GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG < SRR4302533.171170/94‑1 (MQ=60)
GTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG > SRR4302533.4253267/1‑94 (MQ=60)
GGTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACACAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGG > SRR4302533.301383/1‑94 (MQ=60)
TCCACACGACAAAGCCCGGCAACCCTCCCACTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGT < SRR4302533.3940462/94‑1 (MQ=60)
CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG < SRR4302533.6167975/94‑1 (MQ=60)
CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG < SRR4302533.2421330/94‑1 (MQ=60)
CACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCG > SRR4302533.3336852/1‑94 (MQ=60)
ACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCGG < SRR4302533.5227943/94‑1 (MQ=60)
ACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAG < SRR4302533.547757/94‑1 (MQ=60)
ACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAG > SRR4302533.3955356/1‑94 (MQ=60)
ACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAT < SRR4302533.2000441/94‑1 (MQ=60)
ACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAT > SRR4302533.3251822/1‑94 (MQ=60)
CAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATT > SRR4302533.475881/1‑94 (MQ=60)
CAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATT < SRR4302533.6056161/94‑1 (MQ=60)
CAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCCCAGGATT > SRR4302533.1720761/1‑94 (MQ=60)
AAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTAT < SRR4302533.5467454/94‑1 (MQ=60)
AGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATA > SRR4302533.2349022/1‑94 (MQ=60)
AGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATA < SRR4302533.3475409/94‑1 (MQ=60)
AGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATA < SRR4302533.5307552/94‑1 (MQ=60)
GTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAG < SRR4302533.1985479/94‑1 (MQ=60)
CCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAG < SRR4302533.3219555/94‑1 (MQ=60)
CCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAG > SRR4302533.5631779/1‑94 (MQ=60)
CGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGA > SRR4302533.5150039/1‑94 (MQ=60)
GGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAA < SRR4302533.4948556/94‑1 (MQ=60)
GGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAA < SRR4302533.4700726/94‑1 (MQ=60)
GGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAA < SRR4302533.3458637/94‑1 (MQ=60)
AAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTC < SRR4302533.3454818/94‑1 (MQ=60)
ACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTTGGGTCGCAGGATTATAGAGAAGTCGG > SRR4302533.4554429/1‑94 (MQ=60)
ACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG < SRR4302533.5609701/94‑1 (MQ=60)
CCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGG < SRR4302533.3863334/94‑1 (MQ=60)
CCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGG < SRR4302533.1584820/94‑1 (MQ=60)
CTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGG < SRR4302533.432983/94‑1 (MQ=60)
CTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGG < SRR4302533.2587654/94‑1 (MQ=60)
TCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGT < SRR4302533.4524118/94‑1 (MQ=60)
CCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC > SRR4302533.1628594/1‑94 (MQ=60)
CCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC > SRR4302533.2565168/1‑94 (MQ=60)
|
CATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTC > NC_000913/3376284‑3376469
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
