Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,403,411 |
T→C |
D113D (GAT→GAC) |
accB → |
acetyl‑CoA carboxylase BCCP subunit |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,403,411 | 0 | T | C | 99.6%
| 868.8
/ NA
| 272 | D113D (GAT→GAC) | accB | acetyl‑CoA carboxylase BCCP subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (123/148); minor base G (1/0); total (124/148) |
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 280 total aligned reads displayed.
ACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGG > NC_000913/3403321‑3403500
|
aCGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAATTCAACGTGGGCGacac < 1:2590081/93‑1 (MQ=255)
cGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACAcc > 1:3585167/1‑93 (MQ=255)
gTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACAccc < 1:4848071/93‑1 (MQ=255)
gTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACAccc > 2:143041/1‑93 (MQ=255)
gTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACAccc < 1:2261678/93‑1 (MQ=255)
ttCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCt < 1:34109/93‑1 (MQ=255)
tCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCtg < 1:411325/93‑1 (MQ=255)
tCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCtg < 1:3861040/93‑1 (MQ=255)
cccGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCtgtg > 1:6054718/1‑93 (MQ=255)
ccGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGc > 1:4707262/1‑93 (MQ=255)
ccGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGc > 2:6176242/1‑93 (MQ=255)
cGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCa < 1:3455984/93‑1 (MQ=255)
aTGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATc < 2:2804296/93‑1 (MQ=255)
tggttggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCg < 2:3962142/93‑1 (MQ=255)
ggttggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGt > 1:3933654/1‑93 (MQ=255)
gttggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGtt > 1:640254/1‑93 (MQ=255)
gttggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGtt > 2:2870690/1‑93 (MQ=255)
ttggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTg < 2:1222006/93‑1 (MQ=255)
ttggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTg < 1:3013832/93‑1 (MQ=255)
ggtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGaa > 2:1488978/1‑93 (MQ=255)
gtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAg < 1:1112623/93‑1 (MQ=255)
gtACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAg > 2:303634/1‑93 (MQ=255)
tACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACGCCCTGTGCATCGTTGAAGc < 2:6126411/93‑1 (MQ=255)
aCTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGcc < 2:2635691/93‑1 (MQ=255)
cTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCa > 1:2057705/1‑93 (MQ=255)
tttCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCAt > 1:1676486/1‑93 (MQ=255)
tttCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCAt > 1:4830308/1‑93 (MQ=255)
tttCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCAt > 2:1285462/1‑93 (MQ=255)
ttCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATg > 2:5662238/1‑93 (MQ=255)
tCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGa > 2:5846242/1‑93 (MQ=255)
tCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGa > 1:3182934/1‑93 (MQ=255)
tcccGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGaaa < 2:599814/91‑1 (MQ=255)
aCCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGaaaa < 2:403033/93‑1 (MQ=255)
ccGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGAGACCCTGTGCATCGTTGAAGCCATGAAAat > 1:5694792/1‑93 (MQ=255)
ccGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAat < 1:6188580/93‑1 (MQ=255)
gCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAatga < 2:3441777/93‑1 (MQ=255)
gCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAatga < 1:1390613/93‑1 (MQ=255)
cACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAatgat < 2:5520555/93‑1 (MQ=255)
aCCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAatgatg > 2:5567388/1‑93 (MQ=255)
aCCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAatgatg < 1:5514434/93‑1 (MQ=255)
cccAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTTTGCATCTTTGAAGCCATGAAAATGATGaa < 2:3846012/93‑1 (MQ=255)
cccAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGaa < 2:3661004/93‑1 (MQ=255)
ccAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAAc > 2:48387/1‑93 (MQ=255)
ccAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAAc > 2:5034364/1‑93 (MQ=255)
cAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAAcc > 1:4254440/1‑93 (MQ=255)
cAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAAcc > 1:2902513/1‑93 (MQ=255)
aaGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCa < 1:5073051/93‑1 (MQ=255)
cccGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGAt < 2:1688632/93‑1 (MQ=255)
cccGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGAt > 1:1891124/1‑93 (MQ=255)
ccGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATc < 1:4568443/93‑1 (MQ=255)
cGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCg < 1:2468155/93‑1 (MQ=255)
cGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCg > 2:2086448/1‑93 (MQ=255)
ggACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGCTCGa > 2:2377041/1‑93 (MQ=255)
ggACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGa < 1:401443/93‑1 (MQ=255)
ggACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGa > 2:1670634/1‑93 (MQ=255)
gACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGaa > 2:378355/1‑93 (MQ=255)
gACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGaa > 2:2714167/1‑93 (MQ=255)
gACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGaa > 1:3044828/1‑93 (MQ=255)
gACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGaa > 2:5298673/1‑93 (MQ=255)
cGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGc > 2:2328453/1‑93 (MQ=255)
cGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGc < 1:5739643/93‑1 (MQ=255)
aaaGCGTTCATCGAAGTGGGTCAGAAAGTCAACGGGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCggcc > 1:917138/1‑91 (MQ=255)
gCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACaaa < 1:4490750/93‑1 (MQ=255)
gCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACaaa > 1:2802188/1‑93 (MQ=255)
gTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATc < 1:5432249/93‑1 (MQ=255)
gTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATc < 2:1959379/93‑1 (MQ=255)
gTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATc > 2:1737145/1‑93 (MQ=255)
gTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATc < 2:4689754/93‑1 (MQ=255)
ttCATCGAAGTGGGTCAGAAAGTCAAGGTGGGCGACACCCTGTGCATCGTTAAATCCATGAAAATGATGAACCAGATCGAAGCGGACAAATcc < 2:1578185/93‑1 (MQ=255)
aTCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGt > 2:4615904/1‑93 (MQ=255)
aTCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGt > 2:4284559/1‑93 (MQ=255)
aTCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGt < 1:1324638/93‑1 (MQ=255)
aTCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGt > 2:5477930/1‑93 (MQ=255)
cGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTAc < 1:6000472/93‑1 (MQ=255)
tGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGa > 1:1124076/1‑93 (MQ=255)
tGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGa < 2:3378947/93‑1 (MQ=255)
aGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCGTGAAAATGATGAACAAGATGGAAGCGGACATATCCGGTACTGTGAAGGCaa > 1:1549977/1‑93 (MQ=255)
gAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAt < 2:2473410/93‑1 (MQ=255)
gAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAt < 2:1172976/93‑1 (MQ=255)
gAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAt < 1:417505/93‑1 (MQ=255)
gAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGAAAt > 2:3101383/1‑93 (MQ=255)
aaaGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAtt < 1:5893084/93‑1 (MQ=255)
aaaGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAtt > 1:2448628/1‑93 (MQ=255)
aaaGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAtt > 2:1256833/1‑93 (MQ=255)
aaGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGAAATTc > 2:4422040/1‑93 (MQ=255)
aGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCt < 1:5181186/93‑1 (MQ=255)
aGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCt < 1:4222308/93‑1 (MQ=255)
aGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCt > 1:3510244/1‑93 (MQ=255)
tCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTgg < 1:970666/93‑1 (MQ=255)
cAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGt < 2:3411741/93‑1 (MQ=255)
aaCGTGGGCGACACCCTGTGCATGGTGGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTc < 1:819914/93‑1 (MQ=255)
aaCGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTc > 1:242789/1‑93 (MQ=255)
aCGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTca > 1:1777855/1‑92 (MQ=255)
aCGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCg > 2:3570873/1‑93 (MQ=255)
aCGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCg > 2:869623/1‑93 (MQ=255)
gTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGaa > 1:5289688/1‑93 (MQ=255)
tGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGaaa < 1:332920/93‑1 (MQ=255)
gggCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAg < 2:785982/93‑1 (MQ=255)
ggCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGt > 1:3691815/1‑93 (MQ=255)
gCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTg < 1:74212/93‑1 (MQ=255)
|
ACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGG > NC_000913/3403321‑3403500
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAA > NC_000913/3403318‑3403504
|
CGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGAC > SRR4302533.421926/1‑94 (MQ=60)
GTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACA > SRR4302533.2932689/1‑94 (MQ=60)
GTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACA > SRR4302533.2416591/1‑94 (MQ=60)
GTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACA > SRR4302533.2405116/1‑94 (MQ=60)
GACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACAC < SRR4302533.2417156/94‑1 (MQ=60)
ACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAATTCAACGTGGGCGACACC < SRR4302533.2606000/94‑1 (MQ=60)
ACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACC > SRR4302533.3607247/1‑94 (MQ=60)
GTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCT > SRR4302533.4038534/1‑94 (MQ=60)
GTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCT > SRR4302533.3638223/1‑94 (MQ=60)
GTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCT > SRR4302533.4392407/1‑94 (MQ=60)
GTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCT < SRR4302533.4877451/94‑1 (MQ=60)
GTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCT < SRR4302533.2275664/94‑1 (MQ=60)
GTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCAAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCT < SRR4302533.3263603/94‑1 (MQ=60)
TTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTG < SRR4302533.34340/94‑1 (MQ=60)
TCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGT < SRR4302533.413792/94‑1 (MQ=60)
TCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGT < SRR4302533.3884608/94‑1 (MQ=60)
CCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTG > SRR4302533.2203983/1‑94 (MQ=60)
CCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTG < SRR4302533.9284/94‑1 (MQ=60)
CCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTG < SRR4302533.1311635/94‑1 (MQ=60)
CCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTG > SRR4302533.6091384/1‑94 (MQ=60)
CCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGC > SRR4302533.1943260/1‑94 (MQ=60)
CCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGC > SRR4302533.4735795/1‑94 (MQ=60)
CCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCA > SRR4302533.3926776/1‑94 (MQ=60)
CCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCA < SRR4302533.3370302/94‑1 (MQ=60)
CGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCAT > SRR4302533.3545322/1‑94 (MQ=60)
CGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCAT < SRR4302533.3477313/94‑1 (MQ=60)
CGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCAT < SRR4302533.2499500/94‑1 (MQ=60)
GATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATC < SRR4302533.2918018/94‑1 (MQ=60)
GATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATC < SRR4302533.6006696/94‑1 (MQ=60)
GATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATC < SRR4302533.1578103/94‑1 (MQ=60)
ATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCG > SRR4302533.3171154/1‑94 (MQ=60)
TGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGT < SRR4302533.3522974/94‑1 (MQ=60)
TGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGT > SRR4302533.3957665/1‑94 (MQ=60)
GGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTT > SRR4302533.4057821/1‑94 (MQ=60)
GGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTT > SRR4302533.644020/1‑94 (MQ=60)
TTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGA < SRR4302533.3032266/94‑1 (MQ=60)
TGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAA > SRR4302533.4868841/1‑94 (MQ=60)
TGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAA < SRR4302533.693300/94‑1 (MQ=60)
TGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAA < SRR4302533.6143631/94‑1 (MQ=60)
GGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAG < SRR4302533.2464052/94‑1 (MQ=60)
GTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGC > SRR4302533.5759661/1‑94 (MQ=60)
GTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGC < SRR4302533.1119223/94‑1 (MQ=60)
ACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCA < SRR4302533.6273905/94‑1 (MQ=60)
ACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCA > SRR4302533.2070393/1‑94 (MQ=60)
CTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCAT > SRR4302533.1686637/1‑94 (MQ=60)
CTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCAT > SRR4302533.4859584/1‑94 (MQ=60)
TTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGA > SRR4302533.3202516/1‑94 (MQ=60)
TTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGA < SRR4302533.3123237/94‑1 (MQ=60)
TCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAA > SRR4302533.2127718/1‑94 (MQ=60)
TCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAA > SRR4302533.3586036/1‑94 (MQ=60)
CTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAA > SRR4302533.2402268/1‑94 (MQ=60)
CTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAA > SRR4302533.6039039/1‑94 (MQ=60)
ACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGAGACCCTGTGCATCGTTGAAGCCATGAAAAT > SRR4302533.5729184/1‑94 (MQ=60)
CCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATG < SRR4302533.6225720/94‑1 (MQ=60)
CGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGA > SRR4302533.3984935/1‑94 (MQ=60)
GCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGAT > SRR4302533.4262198/1‑94 (MQ=60)
GCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGAT < SRR4302533.5818233/94‑1 (MQ=60)
GCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGAT < SRR4302533.1398989/94‑1 (MQ=60)
GCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGAT > SRR4302533.4620333/1‑94 (MQ=60)
CCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGAT < SRR4302533.100283/94‑1 (MQ=60)
CACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATG > SRR4302533.3479367/1‑94 (MQ=60)
ACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGA < SRR4302533.5547726/94‑1 (MQ=60)
CCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAA < SRR4302533.3035412/94‑1 (MQ=60)
CCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAA < SRR4302533.1834348/94‑1 (MQ=60)
CCAAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGATC < SRR4302533.3461052/94‑1 (MQ=60)
CCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACC > SRR4302533.4280094/1‑94 (MQ=60)
CCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACC > SRR4302533.2920341/1‑94 (MQ=60)
atgaCCGGACGCAAAAGCGTTCATCGAAGTGATTCAGAAATTCAACGTGGGCGACGCCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAG < SRR4302533.5892851/90‑1 (MQ=60)
AAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAG < SRR4302533.5103713/94‑1 (MQ=60)
GCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGAT > SRR4302533.1902669/1‑94 (MQ=60)
GCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGAT > SRR4302533.5316395/1‑94 (MQ=60)
CCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATGGTTGAAGCCATGAAAATGATGAACCAGATC < SRR4302533.2572831/94‑1 (MQ=60)
CCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATC < SRR4302533.5828777/94‑1 (MQ=60)
CCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATC > SRR4302533.6337601/1‑94 (MQ=60)
CCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATC < SRR4302533.4744216/94‑1 (MQ=60)
CCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATA > SRR4302533.1718602/1‑94 (MQ=60)
CCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCG < SRR4302533.1969205/94‑1 (MQ=60)
CCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCG < SRR4302533.4596133/94‑1 (MQ=60)
CCGGACGCAAAAGCGTTCATCGAAGTGGATCAGAAATTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCG < SRR4302533.1420373/94‑1 (MQ=60)
CGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGA > SRR4302533.5137390/1‑94 (MQ=60)
CGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGA < SRR4302533.2483378/94‑1 (MQ=60)
CGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGA > SRR4302533.3754913/1‑94 (MQ=60)
gtagGCAAAAGCGTGCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAA < SRR4302533.803216/90‑1 (MQ=60)
GGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAA > SRR4302533.842640/1‑94 (MQ=60)
GGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAA > SRR4302533.3063466/1‑94 (MQ=60)
GGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAA < SRR4302533.403865/94‑1 (MQ=60)
GGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAA > SRR4302533.6186059/1‑94 (MQ=60)
GACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCATGGTGGTCGACACCGTGTGCTGCGTTGAAGCCATGAAAATGATGAACCAGATCGAAG < SRR4302533.3056237/94‑1 (MQ=60)
GACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAG < SRR4302533.2926840/94‑1 (MQ=60)
GACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAG < SRR4302533.4530022/94‑1 (MQ=60)
GACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAG < SRR4302533.305489/94‑1 (MQ=60)
GACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAG < SRR4302533.5491753/94‑1 (MQ=60)
CGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCG < SRR4302533.5774279/94‑1 (MQ=60)
GCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGG < SRR4302533.4203369/94‑1 (MQ=60)
CAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGA < SRR4302533.5161293/94‑1 (MQ=60)
AAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGAC > SRR4302533.941100/1‑94 (MQ=60)
AAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGAC < SRR4302533.1366612/94‑1 (MQ=60)
AAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGGGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGCC > SRR4302533.922527/1‑94 (MQ=60)
AAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAA > SRR4302533.2456977/1‑94 (MQ=60)
AGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAA > SRR4302533.2819432/1‑94 (MQ=60)
GCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAAT < SRR4302533.4517948/94‑1 (MQ=60)
GCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAAT < SRR4302533.3272972/94‑1 (MQ=60)
GCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAAT < SRR4302533.2703248/94‑1 (MQ=60)
CGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCCTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATC < SRR4302533.3397852/94‑1 (MQ=60)
GTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCC < SRR4302533.557382/94‑1 (MQ=60)
GTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCC < SRR4302533.5464963/94‑1 (MQ=60)
GTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCC > SRR4302533.4087752/1‑94 (MQ=60)
TCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGG > SRR4302533.4633953/1‑94 (MQ=60)
ATCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTA < SRR4302533.1332585/94‑1 (MQ=60)
TCGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTAC < SRR4302533.682935/94‑1 (MQ=60)
CGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACC < SRR4302533.1417742/94‑1 (MQ=60)
CGAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACC < SRR4302533.6036819/94‑1 (MQ=60)
GAAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCG > SRR4302533.777862/1‑94 (MQ=60)
AAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGT < SRR4302533.1364529/94‑1 (MQ=60)
AAGTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGT > SRR4302533.3766174/1‑94 (MQ=60)
AGTGTGTCAGAAAGTCAACGTGGGCGACCCCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTG < SRR4302533.2784905/94‑1 (MQ=60)
GTGGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGA > SRR4302533.1130746/1‑94 (MQ=60)
GGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAA < SRR4302533.1125593/94‑1 (MQ=60)
GGGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAA > SRR4302533.2404736/1‑94 (MQ=60)
GGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAG < SRR4302533.424513/94‑1 (MQ=60)
GGTCAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAG < SRR4302533.5405517/94‑1 (MQ=60)
CAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCGTGAAAATGATGAACAAGATGGAAGCGGACATATCCGGTACTGTGAAGGCAA > SRR4302533.1559316/1‑94 (MQ=60)
CAGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAA > SRR4302533.490312/1‑94 (MQ=60)
AGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAT > SRR4302533.4547918/1‑94 (MQ=60)
AGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAT > SRR4302533.4180230/1‑94 (MQ=60)
AGAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAAT > SRR4302533.4929126/1‑94 (MQ=60)
GAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATT > SRR4302533.2463742/1‑94 (MQ=60)
GAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATT < SRR4302533.420010/94‑1 (MQ=60)
GAAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATT < SRR4302533.369624/94‑1 (MQ=60)
AAAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTC < SRR4302533.5928679/94‑1 (MQ=60)
AAGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCT > SRR4302533.3531884/1‑94 (MQ=60)
AGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTG > SRR4302533.179223/1‑94 (MQ=60)
AGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTG > SRR4302533.2916512/1‑94 (MQ=60)
AGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTG < SRR4302533.5212473/94‑1 (MQ=60)
AGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTG > SRR4302533.4837083/1‑94 (MQ=60)
AGTCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTG < SRR4302533.4247837/94‑1 (MQ=60)
ATCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGG < SRR4302533.5931357/94‑1 (MQ=60)
TCAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGT < SRR4302533.976361/94‑1 (MQ=60)
CAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTC > SRR4302533.244293/1‑94 (MQ=60)
CAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTC > SRR4302533.5663955/1‑94 (MQ=60)
CAACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTC > SRR4302533.1133114/1‑94 (MQ=60)
AACGTGGGCGACACCCTGTGCATGGTGGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCG < SRR4302533.824721/94‑1 (MQ=60)
AACGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCA > SRR4302533.1788680/1‑94 (MQ=60)
CGTGGGCGACACCCTGTGCATCTTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAA < SRR4302533.1651101/94‑1 (MQ=60)
CGTGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAA > SRR4302533.5321366/1‑94 (MQ=60)
TGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAG < SRR4302533.4413027/94‑1 (MQ=60)
TGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAG < SRR4302533.334957/94‑1 (MQ=60)
TGGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAG > SRR4302533.5312327/1‑94 (MQ=60)
GGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGT < SRR4302533.4169539/94‑1 (MQ=60)
GGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGT > SRR4302533.3714498/1‑94 (MQ=60)
GGGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGT > SRR4302533.5454477/1‑94 (MQ=60)
GGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTG < SRR4302533.5756407/94‑1 (MQ=60)
GGCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTG > SRR4302533.246849/1‑94 (MQ=60)
GCGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGG < SRR4302533.74691/94‑1 (MQ=60)
CGACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGA > SRR4302533.3879221/1‑94 (MQ=60)
GACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGAC > SRR4302533.5089116/1‑94 (MQ=60)
ACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACA < SRR4302533.6018524/94‑1 (MQ=60)
ACACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACA < SRR4302533.4978201/94‑1 (MQ=60)
CACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAA > SRR4302533.2373419/1‑94 (MQ=60)
CACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAA > SRR4302533.3455569/1‑94 (MQ=60)
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CGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAA > NC_000913/3403318‑3403504
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |