Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,704,865 |
T→C |
K157R (AAG→AGG) |
dppA ← |
dipeptide transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,704,865 | 0 | T | C | 100.0%
| 716.3
/ NA
| 222 | K157R (AAG→AGG) | dppA | dipeptide transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/115); total (107/115) |
Only 100 of 232 total aligned reads displayed.
GACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG > NC_000913/3704775‑3704954
|
gACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCctt < 1:3298772/93‑1 (MQ=255)
aCAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAAC‑GTGTTGTCGTCCACCttttt > 1:4379827/1‑93 (MQ=255)
aGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttc > 2:4643368/1‑93 (MQ=255)
gAATAGAGGCGAAGTCCATTGCCAGGTCAGCAAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttca < 2:1864817/93‑1 (MQ=255)
aTAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcact > 1:3651651/1‑93 (MQ=255)
agagGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcacttc > 2:4099929/1‑93 (MQ=255)
ggAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGa < 2:1172811/92‑1 (MQ=255)
cGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGa > 1:2516190/1‑93 (MQ=255)
cGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGa < 2:2422597/93‑1 (MQ=255)
gAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGACGAGTCAGCACAAACTGAACGGTGTTGCCGTCCACCCTTTTCACTTCACTGAt > 1:3044604/1‑93 (MQ=255)
aaGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATc < 2:1739447/93‑1 (MQ=255)
aaGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATc < 2:2167741/93‑1 (MQ=255)
aaGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATc > 2:2301630/1‑93 (MQ=255)
aGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCa < 1:4861844/93‑1 (MQ=255)
aGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCa < 2:6134436/93‑1 (MQ=255)
tCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGc < 2:1256667/93‑1 (MQ=255)
tCCATTGCCAGGTCAGCGAGGAACGGCCCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGc > 2:589519/1‑93 (MQ=255)
ccATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGct < 2:3163069/93‑1 (MQ=255)
cATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctc > 1:922533/1‑93 (MQ=255)
cATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctc < 1:5431769/93‑1 (MQ=255)
aTTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctct > 1:2271771/1‑93 (MQ=255)
ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg > 1:4589292/1‑93 (MQ=255)
ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg > 1:1572678/1‑93 (MQ=255)
ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg > 1:3195996/1‑93 (MQ=255)
ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg > 2:5230918/1‑93 (MQ=255)
ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg < 2:5661039/93‑1 (MQ=255)
tGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTgg < 1:3496927/93‑1 (MQ=255)
gCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGc > 1:571170/1‑93 (MQ=255)
ccAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCa < 2:4377164/93‑1 (MQ=255)
ccAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCa > 2:2003168/1‑93 (MQ=255)
aGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAg > 2:4213440/1‑93 (MQ=255)
ggTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGc < 2:2632191/93‑1 (MQ=255)
tCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGccc < 2:5236920/93‑1 (MQ=255)
tCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGccc > 1:3731199/1‑93 (MQ=255)
cAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCa > 2:1579832/1‑93 (MQ=255)
cAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCa < 2:3915402/93‑1 (MQ=255)
cAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCa < 2:4603784/93‑1 (MQ=255)
gCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATg > 2:6251414/1‑93 (MQ=255)
gAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGcc > 2:2529264/1‑93 (MQ=255)
aGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCt > 1:5998233/1‑93 (MQ=255)
aCGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGa > 2:5856195/1‑93 (MQ=255)
cGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGaa < 1:3862292/93‑1 (MQ=255)
cGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGaa < 1:5357812/93‑1 (MQ=255)
cGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGaa < 2:2265550/93‑1 (MQ=255)
cGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGaa < 2:4693850/93‑1 (MQ=255)
cgcTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTa < 2:2046213/93‑1 (MQ=255)
gcTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAt > 1:3581893/1‑93 (MQ=255)
gcTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAt < 1:1827298/93‑1 (MQ=255)
cTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCGCTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAtt < 1:3392154/93‑1 (MQ=255)
cTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAtt < 2:3031962/93‑1 (MQ=255)
cTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAtt < 2:5513433/93‑1 (MQ=255)
ttCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTc > 1:1224769/1‑93 (MQ=255)
ttCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTc < 2:5985459/93‑1 (MQ=255)
ttCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTc > 2:277686/1‑93 (MQ=255)
ttCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTc < 2:704434/93‑1 (MQ=255)
ccGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGt < 1:258197/93‑1 (MQ=255)
ccGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGt < 1:2658812/93‑1 (MQ=255)
cGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTa > 2:381402/1‑93 (MQ=255)
cGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTa < 1:4521857/93‑1 (MQ=255)
gggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAg < 1:5068400/93‑1 (MQ=255)
gggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAg > 2:2499706/1‑93 (MQ=255)
gggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAg < 1:2739162/93‑1 (MQ=255)
ggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGc < 1:2037166/93‑1 (MQ=255)
ggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGc < 1:5339383/93‑1 (MQ=255)
ggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACGGATCATCTCTGGGAAGCCCATGCCTTCGAAGTATTCGTAGc > 1:5929936/1‑93 (MQ=255)
gCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCt < 1:2508077/93‑1 (MQ=255)
gAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgc < 2:3589066/93‑1 (MQ=255)
aGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgcc > 1:421472/1‑93 (MQ=255)
gTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgccg < 2:5695504/93‑1 (MQ=255)
tCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgccgc < 1:685260/93‑1 (MQ=255)
cAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgccgcc > 1:399660/1‑93 (MQ=255)
aGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCa > 2:349050/1‑93 (MQ=255)
acaAGCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaa < 1:4407999/93‑1 (MQ=255)
acaAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaa > 2:4971244/1‑93 (MQ=255)
caAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaaa < 1:1683540/93‑1 (MQ=255)
caAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaaa > 1:5140849/1‑93 (MQ=255)
aaaCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAAc > 1:5292157/1‑93 (MQ=255)
aaaCTGAACGGTGTTGTCGTCCAACCTTTTCACTTCACTGATCAGCACTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAAc > 2:5075056/1‑93 (MQ=255)
aCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACtt > 2:4291692/1‑93 (MQ=255)
tGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTa < 1:2805029/93‑1 (MQ=255)
tGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTa < 2:915208/93‑1 (MQ=255)
tGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTa > 2:2934471/1‑93 (MQ=255)
tGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGACCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTa < 1:869280/93‑1 (MQ=255)
gAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAt > 2:4550099/1‑93 (MQ=255)
aCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATgg > 2:4457241/1‑93 (MQ=255)
aCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATgg > 1:6239378/1‑93 (MQ=255)
aCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATgg > 1:5571478/1‑93 (MQ=255)
aCGGGGTTCTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTACCTGCCGCCAGAAACTTTATgg < 2:1338826/93‑1 (MQ=255)
ggTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTa < 1:1000502/93‑1 (MQ=255)
gtgtTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTAc > 2:3339243/1‑93 (MQ=255)
tgttgtCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACg > 2:3822332/1‑93 (MQ=255)
tgttgtCGTCCACCCTTTGCGCTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACg < 1:983217/93‑1 (MQ=255)
gttgtCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACgg > 2:2944797/1‑93 (MQ=255)
ttgtCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACggg > 1:6108346/1‑93 (MQ=255)
cgtcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGtttt < 2:5085219/93‑1 (MQ=255)
tcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgc > 1:1841104/1‑93 (MQ=255)
cACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgcgc < 2:2857102/93‑1 (MQ=255)
cACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgcgc < 1:5203427/93‑1 (MQ=255)
cACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgcgc > 1:2079478/1‑93 (MQ=255)
cACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgcgc < 1:19430/93‑1 (MQ=255)
|
GACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG > NC_000913/3704775‑3704954
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTGACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTT > NC_000913/3704772‑3704958
|
TTTGACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCC > SRR4302533.5115232/1‑94 (MQ=60)
TTTGACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCC > SRR4302533.1621796/1‑94 (MQ=60)
TTGACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCT < SRR4302533.3061612/94‑1 (MQ=60)
TGACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTT > SRR4302533.5786833/1‑94 (MQ=60)
GACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTT < SRR4302533.3319127/94‑1 (MQ=60)
GACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAAC‑GTGTTGTCGTCCACCTTTTT > SRR4302533.4406270/1‑94 (MQ=60)
ACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTT < SRR4302533.5248854/94‑1 (MQ=60)
CAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTC > SRR4302533.5306205/1‑94 (MQ=60)
AATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACT > SRR4302533.3674102/1‑94 (MQ=60)
ATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTT > SRR4302533.5604795/1‑94 (MQ=60)
TAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTC < SRR4302533.6216024/94‑1 (MQ=60)
AGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCA < SRR4302533.4732954/94‑1 (MQ=60)
AGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCA > SRR4302533.3670642/1‑94 (MQ=60)
GCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGA < SRR4302533.6294939/94‑1 (MQ=60)
GCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGA < SRR4302533.2876438/94‑1 (MQ=60)
GCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGA > SRR4302533.2531695/1‑94 (MQ=60)
CGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGACGAGTCAGCACAAACTGAACGGTGTTGCCGTCCACCCTTTTCACTTCACTGAT > SRR4302533.3063239/1‑94 (MQ=60)
AGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAG < SRR4302533.3822249/94‑1 (MQ=60)
AGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAG < SRR4302533.4891312/94‑1 (MQ=60)
CCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTC > SRR4302533.6159404/1‑94 (MQ=60)
CCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTC > SRR4302533.3719588/1‑94 (MQ=60)
CCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTC > SRR4302533.927953/1‑94 (MQ=60)
CATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCT < SRR4302533.105776/94‑1 (MQ=60)
CATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCT > SRR4302533.514662/1‑94 (MQ=60)
CATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCT < SRR4302533.5464478/94‑1 (MQ=60)
CATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCT > SRR4302533.2285830/1‑94 (MQ=60)
ATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTG > SRR4302533.4617090/1‑94 (MQ=60)
ATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTG > SRR4302533.3215661/1‑94 (MQ=60)
ATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTG > SRR4302533.1582149/1‑94 (MQ=60)
ATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTG > SRR4302533.3388618/1‑94 (MQ=60)
ATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTG > SRR4302533.1925028/1‑94 (MQ=60)
TTGCCAGGTCAGCGAGGAACGGCGCGTCCGGGCGAGTCAGCACAAACTGAACGGGGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGG < SRR4302533.43487/94‑1 (MQ=60)
TGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGC > SRR4302533.574543/1‑94 (MQ=60)
TGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGC < SRR4302533.3518491/94‑1 (MQ=60)
CCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAA < SRR4302533.2740405/94‑1 (MQ=60)
CAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAG < SRR4302533.5793960/94‑1 (MQ=60)
AGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGC > SRR4302533.3094388/1‑94 (MQ=60)
AGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGAAAGC > SRR4302533.2563530/1‑94 (MQ=60)
GTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCC > SRR4302533.3754085/1‑94 (MQ=60)
GTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCC < SRR4302533.870758/94‑1 (MQ=60)
GTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCC < SRR4302533.4436731/94‑1 (MQ=60)
CAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCCCTGATCAGCTCTGGCAAGCCCAT < SRR4302533.888747/94‑1 (MQ=60)
CAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCAT < SRR4302533.2177134/94‑1 (MQ=60)
AGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATG < SRR4302533.3941193/94‑1 (MQ=60)
CGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCC > SRR4302533.3565434/1‑94 (MQ=60)
GAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCT < SRR4302533.881013/94‑1 (MQ=60)
GAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCT > SRR4302533.6034560/1‑94 (MQ=60)
AGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTT < SRR4302533.3375641/94‑1 (MQ=60)
CGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAG > SRR4302533.2050554/1‑94 (MQ=60)
CGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAG < SRR4302533.5389973/94‑1 (MQ=60)
CGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAG < SRR4302533.3885867/94‑1 (MQ=60)
GCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTA < SRR4302533.395160/94‑1 (MQ=60)
CGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAT > SRR4302533.3603957/1‑94 (MQ=60)
GCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATT < SRR4302533.1838459/94‑1 (MQ=60)
CTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCGCTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTC < SRR4302533.3413103/94‑1 (MQ=60)
CTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTC > SRR4302533.1232110/1‑94 (MQ=60)
CTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTC > SRR4302533.5368963/1‑94 (MQ=60)
TCCGGGCGAGTCAGCACAAACTGAACGGTGTTCTCCTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGT < SRR4302533.5388683/94‑1 (MQ=60)
CCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTA < SRR4302533.982516/94‑1 (MQ=60)
CCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTA > SRR4302533.6093570/1‑94 (MQ=60)
CCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTA < SRR4302533.2675144/94‑1 (MQ=60)
CCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTA < SRR4302533.259767/94‑1 (MQ=60)
CGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAG > SRR4302533.4432389/1‑94 (MQ=60)
CGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAG < SRR4302533.5425377/94‑1 (MQ=60)
CGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAG < SRR4302533.4549235/94‑1 (MQ=60)
CGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGACTTCGAAGTATTCGTAG > SRR4302533.3428893/1‑94 (MQ=60)
CGGGCGAGTCAGCACAAACTGAACGGTGTTGGCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAG < SRR4302533.5088019/94‑1 (MQ=60)
GGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGC < SRR4302533.5099006/94‑1 (MQ=60)
GGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGC < SRR4302533.2755959/94‑1 (MQ=60)
GGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGC < SRR4302533.1477803/94‑1 (MQ=60)
GGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACGGATCATCTCTGGGAAGCCCATGCCTTCGAAGTATTCGTAGC > SRR4302533.5965786/1‑94 (MQ=60)
GGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCT < SRR4302533.2049728/94‑1 (MQ=60)
GGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCT < SRR4302533.5371401/94‑1 (MQ=60)
GCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTG < SRR4302533.2523532/94‑1 (MQ=60)
CGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGC > SRR4302533.1731403/1‑94 (MQ=60)
GAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCC > SRR4302533.2502747/1‑94 (MQ=60)
GAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCC < SRR4302533.4440614/94‑1 (MQ=60)
GAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCC > SRR4302533.423992/1‑94 (MQ=60)
AGTCAGCGCAAACTGAGCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCG < SRR4302533.276652/94‑1 (MQ=60)
TCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCC < SRR4302533.1966796/94‑1 (MQ=60)
TCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCC > SRR4302533.402072/1‑94 (MQ=60)
TCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCC < SRR4302533.689314/94‑1 (MQ=60)
CAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCA > SRR4302533.3262779/1‑94 (MQ=60)
CAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCA < SRR4302533.2531432/94‑1 (MQ=60)
AGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAG < SRR4302533.562720/94‑1 (MQ=60)
GCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGA > SRR4302533.1838815/1‑94 (MQ=60)
CACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAA < SRR4302533.263386/94‑1 (MQ=60)
CACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAA < SRR4302533.4612934/94‑1 (MQ=60)
ACAAGCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAA < SRR4302533.4434618/94‑1 (MQ=60)
ACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAA > SRR4302533.5171919/1‑94 (MQ=60)
CAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAAC > SRR4302533.5323839/1‑94 (MQ=60)
CAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAAC < SRR4302533.1693740/94‑1 (MQ=60)
CTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTA > SRR4302533.1628502/1‑94 (MQ=60)
CTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTA > SRR4302533.6006447/1‑94 (MQ=60)
TGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAT < SRR4302533.2002124/94‑1 (MQ=60)
TGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAT < SRR4302533.2822293/94‑1 (MQ=60)
TGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAT < SRR4302533.2909532/94‑1 (MQ=60)
TGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAT < SRR4302533.4080064/94‑1 (MQ=60)
TGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGACCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAT < SRR4302533.874383/94‑1 (MQ=60)
GAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATG < SRR4302533.5434943/94‑1 (MQ=60)
AACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGG > SRR4302533.3647540/1‑94 (MQ=60)
AACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGG > SRR4302533.6276741/1‑94 (MQ=60)
AACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGG > SRR4302533.5605151/1‑94 (MQ=60)
GGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTAC < SRR4302533.1006341/94‑1 (MQ=60)
TGTTGTCTTCCACCCTTTTCAGTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCTAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGG < SRR4302533.2450539/94‑1 (MQ=60)
TGTTGTCGTCCACCCTTTGCGCTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGG < SRR4302533.988980/94‑1 (MQ=60)
GTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGG > SRR4302533.6145224/1‑94 (MQ=60)
GTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTT < SRR4302533.5041318/94‑1 (MQ=60)
GTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGC > SRR4302533.1852333/1‑94 (MQ=60)
TCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCG < SRR4302533.5184853/94‑1 (MQ=60)
CCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGC > SRR4302533.2092273/1‑94 (MQ=60)
CACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG > SRR4302533.1742835/1‑94 (MQ=60)
CACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG < SRR4302533.19561/94‑1 (MQ=60)
CACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG > SRR4302533.2661522/1‑94 (MQ=60)
CACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG < SRR4302533.5234784/94‑1 (MQ=60)
ACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGT > SRR4302533.4071414/1‑94 (MQ=60)
ACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGT > SRR4302533.654182/1‑94 (MQ=60)
ACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGT > SRR4302533.4887199/1‑94 (MQ=60)
ACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGT > SRR4302533.1097911/1‑94 (MQ=60)
CCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTT > SRR4302533.2313212/1‑94 (MQ=60)
CCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTT > SRR4302533.6335640/1‑94 (MQ=60)
CTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTT < SRR4302533.3084123/94‑1 (MQ=60)
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TTTGACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTT > NC_000913/3704772‑3704958
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
