Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,861,593 |
G→A |
S23N (AGC→AAC) |
yidP → |
putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,861,593 | 0 | G | A | 99.6%
| 810.2
/ NA
| 231 | S23N (AGC→AAC) | yidP | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (122/108); minor base T (0/1); total (122/109) |
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 234 total aligned reads displayed.
GCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGG > NC_000913/3861503‑3861682
|
cAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACct < 2:5195292/93‑1 (MQ=255)
aGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACctt > 2:607632/1‑93 (MQ=255)
aGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACctt < 1:2453586/93‑1 (MQ=255)
ggCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACcttc < 2:1620469/93‑1 (MQ=255)
cAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACcttctt > 2:6168970/1‑93 (MQ=255)
cAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACcttctt < 1:4066826/93‑1 (MQ=255)
aaaaaaGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCttcttc > 1:4827036/1‑93 (MQ=255)
aaaaaGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTcc > 1:4020899/1‑93 (MQ=255)
aaaaGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGTAGATTTCACGCTAAACAAGCTTCTTccc > 1:4519695/1‑93 (MQ=255)
aaaaGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTccc < 1:5456643/93‑1 (MQ=255)
aaaGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCg < 1:2174777/93‑1 (MQ=255)
agagATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGt > 1:5597678/1‑93 (MQ=255)
gagaTCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTg > 1:5342612/1‑93 (MQ=255)
gagaTCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTg > 1:5510421/1‑93 (MQ=255)
agaTCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGa < 1:3221421/93‑1 (MQ=255)
gaTCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGaa > 2:3865189/1‑93 (MQ=255)
aTCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGaaa < 2:4105732/93‑1 (MQ=255)
aTCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGaaa < 1:4969942/93‑1 (MQ=255)
cTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGaaaaa > 1:872783/1‑93 (MQ=255)
gagaTGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAg < 2:1701555/93‑1 (MQ=255)
gatgatCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCt > 2:4398126/1‑93 (MQ=255)
gatgatCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCt > 2:5948162/1‑93 (MQ=255)
atgatCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTg < 1:2738519/93‑1 (MQ=255)
atgatCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTg < 2:2871030/93‑1 (MQ=255)
gatCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGc < 2:3023369/93‑1 (MQ=255)
tACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGaa < 1:3600283/93‑1 (MQ=255)
tACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGaa > 2:5834389/1‑93 (MQ=255)
tACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGaa > 2:958484/1‑93 (MQ=255)
aCAAAAGCATTGAGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAag > 2:5057311/1‑93 (MQ=255)
cAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAaga > 1:3803635/1‑93 (MQ=255)
cAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAaga > 1:5408876/1‑93 (MQ=255)
cAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGCGAAAAAAAGCTGGCGGAaga > 1:5804334/1‑93 (MQ=255)
aaaaGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAagag > 1:1025503/1‑93 (MQ=255)
aaaaGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAagag > 1:2311085/1‑93 (MQ=255)
aaaaGCATTGCGGAGCGGTGAAGAATTCGACTTAGCTCCGCAGATTCCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAagag < 2:4777723/93‑1 (MQ=255)
aaaGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGt > 2:5215242/1‑93 (MQ=255)
aaGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGtt > 2:459020/1‑93 (MQ=255)
aGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGttt > 1:5103558/1‑93 (MQ=255)
aGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGttt < 2:4847698/93‑1 (MQ=255)
gCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTg < 1:2891682/93‑1 (MQ=255)
gCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTg > 1:2787510/1‑93 (MQ=255)
gCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTg > 2:1081892/1‑93 (MQ=255)
cATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGc < 2:3405010/93‑1 (MQ=255)
aTTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCg < 2:3712486/93‑1 (MQ=255)
ttGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCgg > 1:1417940/1‑93 (MQ=255)
ttGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCgg < 2:1568388/93‑1 (MQ=255)
tGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGt < 1:1926449/93‑1 (MQ=255)
cGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTAt < 1:5857373/93‑1 (MQ=255)
aGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATcgc < 2:5798963/93‑1 (MQ=255)
gCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATcgcg > 1:494550/1‑93 (MQ=255)
gCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATcgcg > 2:1977910/1‑93 (MQ=255)
cGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCgg < 1:1469948/93‑1 (MQ=255)
cGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCgg < 2:2004441/93‑1 (MQ=255)
cGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAACTGGCGGAAGAGGTTGCGGTATCGCgg > 2:3105996/1‑93 (MQ=255)
ggTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGa < 2:3469918/93‑1 (MQ=255)
ggTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGa < 1:2575228/93‑1 (MQ=255)
ggTTAAGAATGCGAGTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGa < 1:1742586/93‑1 (MQ=255)
cgTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGa < 2:1766971/92‑1 (MQ=255)
gTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAACAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAt > 1:1071956/1‑93 (MQ=255)
gTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAt > 2:772500/1‑93 (MQ=255)
aaGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGAc < 2:4786308/93‑1 (MQ=255)
aGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGAcc < 1:650370/93‑1 (MQ=255)
gAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCa > 2:80211/1‑93 (MQ=255)
aaTTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCAt < 1:1441074/93‑1 (MQ=255)
ttCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATcc > 2:1281566/1‑93 (MQ=255)
ttCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATcc > 2:2822540/1‑93 (MQ=255)
ttCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATcc > 2:4656071/1‑93 (MQ=255)
ttCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATcc < 2:5614988/93‑1 (MQ=255)
ttCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATcc > 1:6113517/1‑93 (MQ=255)
tCGACTTAGCTCCGCAGATTTCACGCTAACCAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCg < 1:1686235/93‑1 (MQ=255)
cGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGt > 2:115866/1‑93 (MQ=255)
aCTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTaa > 2:265622/1‑93 (MQ=255)
aCTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTaa < 1:5284905/93‑1 (MQ=255)
cTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTaaa > 1:6203290/1‑93 (MQ=255)
ttAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAg < 1:4726441/93‑1 (MQ=255)
tAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGc > 1:3866777/1‑93 (MQ=255)
tAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGc < 2:1934243/93‑1 (MQ=255)
tAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGc > 2:2498080/1‑93 (MQ=255)
aaCTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGcc < 2:1516775/93‑1 (MQ=255)
cTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCAt > 2:5519915/1‑93 (MQ=255)
tCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCAtt < 2:5432842/93‑1 (MQ=255)
ccGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTg > 1:3166215/1‑93 (MQ=255)
cGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGa < 2:4517675/93‑1 (MQ=255)
cGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGa > 2:3556441/1‑93 (MQ=255)
gCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGAc < 1:994055/93‑1 (MQ=255)
cAGATTTCACGCTAAACATCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGAcc < 2:2972087/93‑1 (MQ=255)
aGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACct > 2:2411398/1‑93 (MQ=255)
aGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACct > 2:4201480/1‑93 (MQ=255)
gATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACctg > 1:5156262/1‑93 (MQ=255)
aTTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACctgc > 2:2210276/1‑93 (MQ=255)
tttCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACctgct > 2:4060005/1‑93 (MQ=255)
ttCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACctgctg < 1:6309008/93‑1 (MQ=255)
aCGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTa > 1:2093845/1‑93 (MQ=255)
gCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAgg > 2:3953004/1‑92 (MQ=255)
gCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGc < 1:3039664/93‑1 (MQ=255)
tAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGt < 1:3755021/93‑1 (MQ=255)
tAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGt < 2:3488077/93‑1 (MQ=255)
aCAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTggg < 2:4268115/93‑1 (MQ=255)
aCAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTggg < 1:1608001/93‑1 (MQ=255)
aCAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTggg < 1:1187230/93‑1 (MQ=255)
|
GCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGG > NC_000913/3861503‑3861682
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGGCT > NC_000913/3861500‑3861686
|
CTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAA > SRR4302533.2902413/1‑94 (MQ=60)
CTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAA < SRR4302533.3521886/94‑1 (MQ=60)
CTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAA < SRR4302533.1353312/94‑1 (MQ=60)
CTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAA > SRR4302533.234528/1‑94 (MQ=60)
TTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAAC > SRR4302533.1850477/1‑94 (MQ=60)
TTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAAC > SRR4302533.3835091/1‑94 (MQ=60)
GCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCT > SRR4302533.641514/1‑94 (MQ=60)
CAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTT < SRR4302533.2248436/94‑1 (MQ=60)
AGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTC < SRR4302533.2468726/94‑1 (MQ=60)
GGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCT < SRR4302533.4911299/94‑1 (MQ=60)
CAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTC > SRR4302533.4856287/1‑94 (MQ=60)
CAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTC < SRR4302533.4091583/94‑1 (MQ=60)
CAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTC < SRR4302533.2842034/94‑1 (MQ=60)
AAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCC > SRR4302533.4045385/1‑94 (MQ=60)
AAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGTAGATTTCACGCTAAACAAGCTTCTTCCC > SRR4302533.4547064/1‑94 (MQ=60)
AAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCC > SRR4302533.1700696/1‑94 (MQ=60)
AAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCG > SRR4302533.1060591/1‑94 (MQ=60)
AAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCG < SRR4302533.5489519/94‑1 (MQ=60)
AAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGG > SRR4302533.1435440/1‑94 (MQ=60)
AAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGG > SRR4302533.3008534/1‑94 (MQ=60)
AAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGG < SRR4302533.2188179/94‑1 (MQ=60)
AAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGT > SRR4302533.5631495/1‑94 (MQ=60)
AAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGT < SRR4302533.637181/94‑1 (MQ=60)
AAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGT < SRR4302533.1150408/94‑1 (MQ=60)
AGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTG > SRR4302533.5374651/1‑94 (MQ=60)
AGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTG > SRR4302533.5543687/1‑94 (MQ=60)
GAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGA < SRR4302533.3938776/94‑1 (MQ=60)
AGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAA < SRR4302533.3241286/94‑1 (MQ=60)
ATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAA < SRR4302533.5000073/94‑1 (MQ=60)
ATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAA > SRR4302533.5504220/1‑94 (MQ=60)
ATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAA > SRR4302533.2109357/1‑94 (MQ=60)
TCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAA > SRR4302533.877906/1‑94 (MQ=60)
CTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAA > SRR4302533.2636385/1‑94 (MQ=60)
AGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAG > SRR4302533.2798150/1‑94 (MQ=60)
AGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAG < SRR4302533.2941413/94‑1 (MQ=60)
GAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGC > SRR4302533.1755538/1‑94 (MQ=60)
AGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCT < SRR4302533.4199585/94‑1 (MQ=60)
AGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCT > SRR4302533.5178784/1‑94 (MQ=60)
GATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTG < SRR4302533.2725336/94‑1 (MQ=60)
GATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTG < SRR4302533.5403997/94‑1 (MQ=60)
GATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTG < SRR4302533.5570461/94‑1 (MQ=60)
ATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGG < SRR4302533.2755313/94‑1 (MQ=60)
ATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGG < SRR4302533.1886268/94‑1 (MQ=60)
ATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGG > SRR4302533.19557/1‑94 (MQ=60)
TGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGC > SRR4302533.6018351/1‑94 (MQ=60)
ATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGG > SRR4302533.5171589/1‑94 (MQ=60)
CTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAA > SRR4302533.535001/1‑94 (MQ=60)
CTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAA > SRR4302533.3350142/1‑94 (MQ=60)
TACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAG < SRR4302533.3622432/94‑1 (MQ=60)
ACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGA > SRR4302533.631648/1‑94 (MQ=60)
ACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGA > SRR4302533.5441388/1‑94 (MQ=60)
ACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGA > SRR4302533.3826910/1‑94 (MQ=60)
ACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGCGAAAAAAAGCTGGCGGAAGA > SRR4302533.5839388/1‑94 (MQ=60)
CAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAG > SRR4302533.2325403/1‑94 (MQ=60)
CAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAG > SRR4302533.1031529/1‑94 (MQ=60)
AAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGT < SRR4302533.1379741/94‑1 (MQ=60)
AAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGT > SRR4302533.2262705/1‑94 (MQ=60)
AAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGT < SRR4302533.488624/94‑1 (MQ=60)
AAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTT < SRR4302533.4514340/94‑1 (MQ=60)
AAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTT < SRR4302533.2404232/94‑1 (MQ=60)
AAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTT > SRR4302533.5134387/1‑94 (MQ=60)
AGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTG > SRR4302533.2804638/1‑94 (MQ=60)
GCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGC < SRR4302533.2909457/94‑1 (MQ=60)
CATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCG > SRR4302533.817828/1‑94 (MQ=60)
ATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGG > SRR4302533.1426520/1‑94 (MQ=60)
TGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTA < SRR4302533.385613/94‑1 (MQ=60)
TGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTA < SRR4302533.1938202/94‑1 (MQ=60)
CGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATC < SRR4302533.3823911/94‑1 (MQ=60)
CGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATC < SRR4302533.5892782/94‑1 (MQ=60)
CGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATC > SRR4302533.6026881/1‑94 (MQ=60)
CGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATC < SRR4302533.5123260/94‑1 (MQ=60)
AGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCG > SRR4302533.497499/1‑94 (MQ=60)
AGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCG > SRR4302533.5192471/1‑94 (MQ=60)
CGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGA > SRR4302533.1557188/1‑94 (MQ=60)
CGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGA < SRR4302533.1478806/94‑1 (MQ=60)
CGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGA > SRR4302533.1461800/1‑94 (MQ=60)
GGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAACAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAT > SRR4302533.1078271/1‑94 (MQ=60)
GGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAT < SRR4302533.1644874/94‑1 (MQ=60)
GGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAT < SRR4302533.3240879/94‑1 (MQ=60)
GGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAT > SRR4302533.5793904/1‑94 (MQ=60)
GGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAT < SRR4302533.2591070/94‑1 (MQ=60)
GGTTAAGAATGCGAGTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGAT < SRR4302533.1753180/94‑1 (MQ=60)
AGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCA < SRR4302533.654209/94‑1 (MQ=60)
AATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATC < SRR4302533.1449768/94‑1 (MQ=60)
ATTCGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCC > SRR4302533.6150410/1‑94 (MQ=60)
TCGACTTAGCTCCGCAGATTTCACGCTAACCAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGT < SRR4302533.1696449/94‑1 (MQ=60)
CGACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTA > SRR4302533.316328/1‑94 (MQ=60)
ACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAA < SRR4302533.3725937/94‑1 (MQ=60)
ACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAA > SRR4302533.6240493/1‑94 (MQ=60)
ACTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAA < SRR4302533.5316562/94‑1 (MQ=60)
CTTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAG < SRR4302533.3427586/94‑1 (MQ=60)
TTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGC > SRR4302533.3890380/1‑94 (MQ=60)
TTAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGC < SRR4302533.4755096/94‑1 (MQ=60)
TAACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCC < SRR4302533.4757418/94‑1 (MQ=60)
AACTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCA < SRR4302533.5471239/94‑1 (MQ=60)
CTCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATT > SRR4302533.5411847/1‑94 (MQ=60)
TCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTG > SRR4302533.3185697/1‑94 (MQ=60)
TCCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTG > SRR4302533.4707680/1‑94 (MQ=60)
CCGCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGA > SRR4302533.588272/1‑94 (MQ=60)
GCAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACC < SRR4302533.999865/94‑1 (MQ=60)
CAGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCT > SRR4302533.159402/1‑94 (MQ=60)
AGATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTG > SRR4302533.5187396/1‑94 (MQ=60)
GATTTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGC > SRR4302533.2522129/1‑94 (MQ=60)
TTCACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGG < SRR4302533.6346917/94‑1 (MQ=60)
CACGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTA > SRR4302533.2106738/1‑94 (MQ=60)
CGCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGC < SRR4302533.3860231/94‑1 (MQ=60)
GCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCG > SRR4302533.5564498/1‑94 (MQ=60)
GCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCG < SRR4302533.3058266/94‑1 (MQ=60)
GCTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCG < SRR4302533.1416989/94‑1 (MQ=60)
CTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGT > SRR4302533.6199385/1‑94 (MQ=60)
CTAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGT < SRR4302533.4993944/94‑1 (MQ=60)
TAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTG < SRR4302533.3778035/94‑1 (MQ=60)
TAAACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTG > SRR4302533.918519/1‑94 (MQ=60)
ACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGG < SRR4302533.4050957/94‑1 (MQ=60)
ACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGG < SRR4302533.1617757/94‑1 (MQ=60)
ACAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGG < SRR4302533.1194354/94‑1 (MQ=60)
CAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGG > SRR4302533.4161354/1‑94 (MQ=60)
CAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGG < SRR4302533.1771674/94‑1 (MQ=60)
CAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGG < SRR4302533.3377569/94‑1 (MQ=60)
CAACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGG < SRR4302533.4826176/94‑1 (MQ=60)
ACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGGCT < SRR4302533.3922110/94‑1 (MQ=60)
ACCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGGCT > SRR4302533.324275/1‑94 (MQ=60)
|
CTTGCAGGCAAAAAAGAGATCTAGAGATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGGCT > NC_000913/3861500‑3861686
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
