Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,867,674 |
A→G |
Q231R (CAG→CGG) |
yidS → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,867,674 | 0 | A | G | 100.0%
| 866.8
/ NA
| 270 | Q231R (CAG→CGG) | yidS | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (144/126); total (144/126) |
Only 100 of 280 total aligned reads displayed.
TTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGT > NC_000913/3867584‑3867763
|
ttGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCCTCCAATGAAAGACGGTCGGa < 2:6066093/93‑1 (MQ=255)
ttGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGa < 1:2915515/93‑1 (MQ=255)
ttGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGa < 2:2189704/93‑1 (MQ=255)
gATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcg > 2:647492/1‑93 (MQ=255)
gATAATTCGATAACTAACTGTTATTCATGGAGAATCAGCAAAGACGGATATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcg > 1:3649599/1‑93 (MQ=255)
aTAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcgc > 1:4799033/1‑93 (MQ=255)
tAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcgcg > 1:3615128/1‑93 (MQ=255)
tAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcgcg > 1:5340342/1‑93 (MQ=255)
aaTTCGATAACTAACTGTTATTCATGGAGTATCAGCGAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGt > 1:1245153/1‑93 (MQ=255)
ttCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGttt < 2:228266/93‑1 (MQ=255)
tCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTc < 2:925770/93‑1 (MQ=255)
gATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCac > 1:2672299/1‑93 (MQ=255)
gATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCac < 1:1982422/93‑1 (MQ=255)
gATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTACTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCac > 1:3385421/1‑93 (MQ=255)
aactaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacgac > 1:5692925/1‑93 (MQ=255)
actaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacgacg > 1:3351198/1‑93 (MQ=255)
ctaactGTTATTCCTGGAGTATCAGCAAAGACGGCTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacgacga > 2:609187/1‑92 (MQ=255)
ctaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGc > 2:1922530/1‑93 (MQ=255)
ctaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGc < 1:2964610/93‑1 (MQ=255)
taactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCt > 1:2061947/1‑93 (MQ=255)
taactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCt < 2:1695956/93‑1 (MQ=255)
aactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTg < 2:2734489/93‑1 (MQ=255)
ctGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaa > 1:2608554/1‑93 (MQ=255)
ctGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaa > 1:310245/1‑93 (MQ=255)
tGTTATTCATGGAGTATCAGCAAAGACTGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaaa < 2:1370750/93‑1 (MQ=255)
tGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaaa < 1:5365636/93‑1 (MQ=255)
tGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaaa > 2:5384232/1‑93 (MQ=255)
tGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaaa < 2:2589757/93‑1 (MQ=255)
tGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaaa > 2:320395/1‑93 (MQ=255)
ttATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAaga < 2:3455355/93‑1 (MQ=255)
ttATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAaga < 1:5763964/93‑1 (MQ=255)
ttATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAaga < 1:4303323/93‑1 (MQ=255)
ttATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAaga < 1:4358284/93‑1 (MQ=255)
aTTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAgaga < 1:2306469/93‑1 (MQ=255)
aTTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAgaga > 2:4135140/1‑93 (MQ=255)
ttCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaa > 2:2673277/1‑93 (MQ=255)
tCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaaa > 1:5445025/1‑93 (MQ=255)
tCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaaa > 1:4674576/1‑93 (MQ=255)
tCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaaa > 1:3053451/1‑93 (MQ=255)
cATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaaaa > 1:3761548/1‑93 (MQ=255)
aTGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAAt < 1:1763145/93‑1 (MQ=255)
tGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATg < 1:5547986/93‑1 (MQ=255)
ggAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGa > 2:4578249/1‑93 (MQ=255)
aGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgc < 1:1065416/93‑1 (MQ=255)
gTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgcg > 1:4590552/1‑93 (MQ=255)
gTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgcg > 1:3521292/1‑93 (MQ=255)
tATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgcgc > 1:439328/1‑93 (MQ=255)
tCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCt > 2:3700203/1‑93 (MQ=255)
tCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCAAGACGCTGAAAGAGAAAATGAGCGGCt > 2:5793649/1‑93 (MQ=255)
cAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCtt < 2:499690/93‑1 (MQ=255)
gCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTc > 2:2258930/1‑93 (MQ=255)
cAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCa < 1:5140145/93‑1 (MQ=255)
aGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGtt < 2:292128/93‑1 (MQ=255)
aGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGtt > 2:3336175/1‑93 (MQ=255)
gACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTc < 1:109327/93‑1 (MQ=255)
cGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCa > 1:1896022/1‑93 (MQ=255)
ggTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTcgcg > 1:1199886/1‑90 (MQ=255)
ggTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAg < 1:4993068/93‑1 (MQ=255)
ggTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAg > 1:5400434/1‑93 (MQ=255)
ggTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAg > 2:6147530/1‑93 (MQ=255)
tATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGttt < 1:4095546/93‑1 (MQ=255)
aTTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTg < 2:3906490/93‑1 (MQ=255)
aTTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTg > 1:6065865/1‑93 (MQ=255)
ttttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTgg > 1:5054422/1‑93 (MQ=255)
ttttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTgg > 2:1174678/1‑93 (MQ=255)
tttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGt < 1:1325631/93‑1 (MQ=255)
tttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGACTTTCAGTTCCAGTTTGGt > 1:2373294/1‑93 (MQ=255)
ttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTa > 2:3045420/1‑93 (MQ=255)
tATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTaa > 1:1512531/1‑93 (MQ=255)
tATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTaa > 2:43027/1‑93 (MQ=255)
tATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTaa < 1:939754/93‑1 (MQ=255)
aTCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAg > 2:5869319/1‑93 (MQ=255)
tCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGa < 2:5196000/93‑1 (MQ=255)
tCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGa < 2:4845462/93‑1 (MQ=255)
tCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGa < 1:325291/93‑1 (MQ=255)
tttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACg > 2:4037362/1‑93 (MQ=255)
tttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACg < 1:4150598/93‑1 (MQ=255)
ttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGATCGCCTTTCAGTTCCAGTTTGGTAAGActg < 2:5545283/93‑3 (MQ=255)
ttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACgg < 2:148776/93‑1 (MQ=255)
gTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGaaaa > 1:3954887/1‑93 (MQ=255)
cccaTCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCg > 1:1367842/4‑93 (MQ=255)
tCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGaaaa < 2:1812673/93‑1 (MQ=255)
tCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGaaaa > 1:6007150/1‑93 (MQ=255)
ccAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGaaaaa < 2:964579/93‑1 (MQ=255)
caaaTGAAAGACGGTCGGCCGCGTTTCACGACGCTGAAAGAGAAATTGAGCGCCTTGCAGTTCCAGTTAGGTAAGACGGTGAAAAGCTaaaat < 2:5342514/91‑2 (MQ=255)
cAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAAt < 1:385321/93‑1 (MQ=255)
aTGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGc < 1:6303912/93‑1 (MQ=255)
tGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCa > 1:562855/1‑93 (MQ=255)
gAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCAc < 2:4779284/93‑1 (MQ=255)
aGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGt < 1:5226175/93‑1 (MQ=255)
aGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGt < 2:2863223/93‑1 (MQ=255)
aGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGt > 1:826353/1‑93 (MQ=255)
gACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTg < 1:2138197/93‑1 (MQ=255)
gACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGCGAAAAGCGAAAAATGCACGGTg > 2:713984/1‑93 (MQ=255)
aCGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGc < 1:4549992/93‑1 (MQ=255)
gggTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAACCGAAAAATGCACGGTGCt < 2:1631796/92‑1 (MQ=255)
gTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGt > 1:1618042/1‑93 (MQ=255)
gTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGt > 2:5936128/1‑93 (MQ=255)
gTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGATGt > 2:3560115/1‑93 (MQ=255)
gTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGGGAGAAGCGAAAAATGCACGGTGCTGt > 1:2542800/1‑93 (MQ=255)
|
TTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGT > NC_000913/3867584‑3867763
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTCC > NC_000913/3867581‑3867767
|
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCG < SRR4302533.4872194/94‑1 (MQ=60)
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCG > SRR4302533.318721/1‑94 (MQ=60)
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCG < SRR4302533.6276130/94‑1 (MQ=60)
CTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGG > SRR4302533.1398197/1‑94 (MQ=60)
TTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGA > SRR4302533.3290156/1‑94 (MQ=60)
TTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAC < SRR4302533.2933395/94‑1 (MQ=60)
TGATAATTCGATAACTAACTGTTATTCATGGAGAATCAGCAAAGACGGATATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACG > SRR4302533.3672038/1‑94 (MQ=60)
GATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGC > SRR4302533.4828103/1‑94 (MQ=60)
GATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGC < SRR4302533.1516799/94‑1 (MQ=60)
ATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCG > SRR4302533.4406505/1‑94 (MQ=60)
ATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCG > SRR4302533.5372367/1‑94 (MQ=60)
ATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCG > SRR4302533.3637370/1‑94 (MQ=60)
TAATTCGATAACTAACTGTTATTCATGGAGTATCAGCGAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGT > SRR4302533.1252587/1‑94 (MQ=60)
TAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGT > SRR4302533.4409725/1‑94 (MQ=60)
TAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGT > SRR4302533.5395659/1‑94 (MQ=60)
AATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTT > SRR4302533.2286486/1‑94 (MQ=60)
ATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTT < SRR4302533.5151922/94‑1 (MQ=60)
ATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTT < SRR4302533.4600360/94‑1 (MQ=60)
TTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTC < SRR4302533.3641853/94‑1 (MQ=60)
TTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTC < SRR4302533.3201021/94‑1 (MQ=60)
TCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCA < SRR4302533.541603/94‑1 (MQ=60)
TCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCA < SRR4302533.1090869/94‑1 (MQ=60)
TCGATAACCAACTGTTATTCATCGAGTATCAGCAAAGACCGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCA < SRR4302533.1710661/94‑1 (MQ=60)
CGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCAC > SRR4302533.2688694/1‑94 (MQ=60)
CGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTACTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCAC > SRR4302533.3406322/1‑94 (MQ=60)
GATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACG < SRR4302533.1994555/94‑1 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCGCGAC > SRR4302533.545598/1‑94 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC > SRR4302533.4040743/1‑94 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC > SRR4302533.5727305/1‑94 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC < SRR4302533.5230621/94‑1 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC > SRR4302533.4639453/1‑94 (MQ=60)
AACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACG < SRR4302533.2913925/94‑1 (MQ=60)
AACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACG > SRR4302533.3371899/1‑94 (MQ=60)
ACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGC > SRR4302533.3619632/1‑94 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT < SRR4302533.124102/94‑1 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT < SRR4302533.5384317/94‑1 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT < SRR4302533.2982731/94‑1 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT > SRR4302533.2074664/1‑94 (MQ=60)
CTAACTGTTATTCATGGAGGATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT > SRR4302533.5444646/1‑94 (MQ=60)
TAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTG > SRR4302533.2061119/1‑94 (MQ=60)
TAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTG > SRR4302533.4674806/1‑94 (MQ=60)
AACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGA > SRR4302533.253923/1‑94 (MQ=60)
ACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAA > SRR4302533.312144/1‑94 (MQ=60)
ACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAA > SRR4302533.2624572/1‑94 (MQ=60)
CTNTNNNTNANGGAGTATCNGNNNAGACGGTTATTTTATCTTTGGNGGTGCCCATCCAATGAAAGACGGTCGGACGNGTTTCACGACGCTGAAA < SRR4302533.4593961/94‑1 (MQ=60)
CTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAA < SRR4302533.4991767/94‑1 (MQ=60)
TGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAG < SRR4302533.5397868/94‑1 (MQ=60)
GTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGA > SRR4302533.3499361/1‑94 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGCAAGAG > SRR4302533.1121135/1‑94 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG < SRR4302533.4384590/94‑1 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG > SRR4302533.2716873/1‑94 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG < SRR4302533.4329213/94‑1 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG < SRR4302533.5798750/94‑1 (MQ=60)
TATTCATGGAGTATCAGCAACGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGA < SRR4302533.4229027/94‑1 (MQ=60)
TATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGA > SRR4302533.1108573/1‑94 (MQ=60)
ATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAA < SRR4302533.2653974/94‑1 (MQ=60)
ATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAA < SRR4302533.2320758/94‑1 (MQ=60)
TTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAA > SRR4302533.5477832/1‑94 (MQ=60)
TTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAA > SRR4302533.3072155/1‑94 (MQ=60)
TTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAA > SRR4302533.4702901/1‑94 (MQ=60)
TCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAA > SRR4302533.3784604/1‑94 (MQ=60)
TCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAA < SRR4302533.1721413/94‑1 (MQ=60)
ATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATG < SRR4302533.1773883/94‑1 (MQ=60)
ATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATG > SRR4302533.1950363/1‑94 (MQ=60)
TGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGA > SRR4302533.381778/1‑94 (MQ=60)
TGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGA < SRR4302533.5581491/94‑1 (MQ=60)
GGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAG < SRR4302533.4340555/94‑1 (MQ=60)
GGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAG < SRR4302533.214604/94‑1 (MQ=60)
GGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAG < SRR4302533.5916687/94‑1 (MQ=60)
GAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGC > SRR4302533.2508879/1‑94 (MQ=60)
AGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCG < SRR4302533.1071674/94‑1 (MQ=60)
AGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCG > SRR4302533.4618358/1‑94 (MQ=60)
AGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCG > SRR4302533.3542999/1‑94 (MQ=60)
GTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCGATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGC > SRR4302533.3403996/1‑94 (MQ=60)
GTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGC > SRR4302533.441948/1‑94 (MQ=60)
GTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGC < SRR4302533.5336639/94‑1 (MQ=60)
TATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCC > SRR4302533.4924204/1‑94 (MQ=60)
CAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTT < SRR4302533.5634460/94‑1 (MQ=60)
AGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTC > SRR4302533.5679491/1‑94 (MQ=60)
CAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAG > SRR4302533.3907763/1‑94 (MQ=60)
CAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAG < SRR4302533.5171211/94‑1 (MQ=60)
CAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAG > SRR4302533.5585329/1‑94 (MQ=60)
AAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTT > SRR4302533.152781/1‑94 (MQ=60)
AAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTC > SRR4302533.377412/1‑94 (MQ=60)
AGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAGGCTGAAAGAGAAAATGAGCGCCTTTCAGTTC > SRR4302533.2295340/1‑94 (MQ=60)
GACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCC < SRR4302533.5688968/94‑1 (MQ=60)
GACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCC < SRR4302533.110022/94‑1 (MQ=60)
ACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCA > SRR4302533.158453/1‑94 (MQ=60)
ACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCA > SRR4302533.5342622/1‑94 (MQ=60)
ACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCA > SRR4302533.1907593/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCgcg > SRR4302533.1207092/1‑91 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.5432885/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.1348269/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.1237527/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.2948029/1‑94 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT > SRR4302533.4318723/1‑94 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT < SRR4302533.5023340/94‑1 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT > SRR4302533.2617215/1‑94 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT > SRR4302533.1312850/1‑94 (MQ=60)
TTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTCCAGTTCCAGTTT < SRR4302533.3538919/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.308740/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG > SRR4302533.3340576/1‑94 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.4597404/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG > SRR4302533.6102577/1‑94 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.4120478/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.2966858/94‑1 (MQ=60)
ATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGG > SRR4302533.5084979/1‑94 (MQ=60)
ATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGG < SRR4302533.3028729/94‑1 (MQ=60)
TTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGT > SRR4302533.3802643/1‑94 (MQ=60)
TTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGT > SRR4302533.4334466/1‑94 (MQ=60)
TTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGACTTTCAGTTCCAGTTTGGT > SRR4302533.2387981/1‑94 (MQ=60)
TTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTA < SRR4302533.1333582/94‑1 (MQ=60)
TTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAA > SRR4302533.417293/1‑94 (MQ=60)
TTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAA > SRR4302533.1521644/1‑94 (MQ=60)
TTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAA > SRR4302533.87077/1‑94 (MQ=60)
TATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAGGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAG < SRR4302533.3403121/94‑1 (MQ=60)
TATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAG > SRR4302533.6066166/1‑94 (MQ=60)
TATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAG < SRR4302533.945276/94‑1 (MQ=60)
ATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTGCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGA > SRR4302533.4734002/1‑94 (MQ=60)
TCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGAC < SRR4302533.327274/94‑1 (MQ=60)
TCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGAC < SRR4302533.3167110/94‑1 (MQ=60)
TCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGAC < SRR4302533.2368753/94‑1 (MQ=60)
TTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGG < SRR4302533.4175741/94‑1 (MQ=60)
TTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGT > SRR4302533.4126924/1‑94 (MQ=60)
GGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGA < SRR4302533.3920439/94‑1 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGATCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA < SRR4302533.364473/94‑1 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA > SRR4302533.5770254/1‑94 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA < SRR4302533.5088213/94‑1 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA > SRR4302533.4492472/1‑94 (MQ=60)
CGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAA > SRR4302533.5049436/1‑94 (MQ=60)
GGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAA > SRR4302533.3978998/1‑94 (MQ=60)
GTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAG < SRR4302533.3049747/94‑1 (MQ=60)
GTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAG < SRR4302533.5987584/94‑1 (MQ=60)
GCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCG > SRR4302533.1376067/1‑94 (MQ=60)
CCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA < SRR4302533.1276221/94‑1 (MQ=60)
CCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA < SRR4302533.1842320/94‑1 (MQ=60)
CCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA > SRR4302533.810689/1‑94 (MQ=60)
ATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAA > SRR4302533.2680418/1‑94 (MQ=60)
ATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAA > SRR4302533.6043544/1‑94 (MQ=60)
CCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAAT > SRR4302533.2348963/1‑94 (MQ=60)
CAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATG < SRR4302533.387646/94‑1 (MQ=60)
CAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATG > SRR4302533.2075476/1‑94 (MQ=60)
AATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGC > SRR4302533.1824834/1‑94 (MQ=60)
ATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCA > SRR4302533.610033/1‑94 (MQ=60)
ATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCA < SRR4302533.6341604/94‑1 (MQ=60)
ATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCA > SRR4302533.566193/1‑94 (MQ=60)
TGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCAC < SRR4302533.1356353/94‑1 (MQ=60)
GAAAGACGGTCGGACTCGTTTCACGACGCTGAAAGAGAAAATGAGCTCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACG < SRR4302533.5552075/94‑1 (MQ=60)
GAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACG < SRR4302533.6305927/94‑1 (MQ=60)
AAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACG < SRR4302533.6256752/94‑1 (MQ=60)
AAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGT > SRR4302533.831198/1‑94 (MQ=60)
AAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGT < SRR4302533.675682/94‑1 (MQ=60)
AAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGT < SRR4302533.5238290/94‑1 (MQ=60)
AGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTG > SRR4302533.3765621/1‑94 (MQ=60)
AGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTG < SRR4302533.5257623/94‑1 (MQ=60)
GACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGC < SRR4302533.2151381/94‑1 (MQ=60)
ACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCT < SRR4302533.4577582/94‑1 (MQ=60)
CGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTG < SRR4302533.5532129/94‑1 (MQ=60)
CGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTG < SRR4302533.473238/94‑1 (MQ=60)
GGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGT > SRR4302533.1627845/1‑94 (MQ=60)
GGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGGGAGAAGCGAAAAATGCACGGTGCTGT > SRR4302533.2558448/1‑94 (MQ=60)
GTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTT > SRR4302533.4804994/1‑94 (MQ=60)
GTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTT < SRR4302533.1926201/94‑1 (MQ=60)
GTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTT > SRR4302533.2054478/1‑94 (MQ=60)
TCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTT > SRR4302533.6124215/1‑94 (MQ=60)
TCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTT > SRR4302533.4491898/1‑94 (MQ=60)
TCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTT > SRR4302533.5875270/1‑94 (MQ=60)
CGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTC < SRR4302533.490391/94‑1 (MQ=60)
GGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTCC > SRR4302533.1911362/1‑94 (MQ=60)
GGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCACTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTCC > SRR4302533.4461769/1‑94 (MQ=60)
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TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTCC > NC_000913/3867581‑3867767
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
