Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,896,607 |
T→C |
T139A (ACG→GCG) |
b3718 ← |
putative isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,896,607 | 0 | T | C | 100.0%
| 804.1
/ NA
| 248 | T139A (ACG→GCG) | b3718 | putative isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/122); total (126/122) |
Only 100 of 250 total aligned reads displayed.
AAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCA > NC_000913/3896517‑3896695
|
aaaGTCGCCACCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCAtt < 2:3739525/93‑1 (MQ=255)
aaGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTc < 2:5949555/93‑1 (MQ=255)
aGTCGCCGCCCAACTCGCCATGCGCCACAATGTCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCg < 1:1226934/93‑1 (MQ=255)
aGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCg < 1:2025931/93‑1 (MQ=255)
gTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCgg > 1:2163892/1‑93 (MQ=255)
cgccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAt > 2:1275327/1‑93 (MQ=255)
cgccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAt < 1:5742397/93‑1 (MQ=255)
gccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAtt < 1:3242509/93‑1 (MQ=255)
gccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAtt > 2:2134104/1‑93 (MQ=255)
ccAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGc > 2:4937645/1‑93 (MQ=255)
ccAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGc > 1:1354249/1‑93 (MQ=255)
cAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGcc < 2:2872782/93‑1 (MQ=255)
cAACTCGCCATGCGCCACAATATCAACCAGCTCTCCCTGGATCGGGAACTCCGCGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGcc < 1:3338952/93‑1 (MQ=255)
aaCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCca < 2:2884527/93‑1 (MQ=255)
aCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCcac < 2:71261/93‑1 (MQ=255)
cTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCcaca < 2:3785680/93‑1 (MQ=255)
tCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACaa > 1:3648060/1‑93 (MQ=255)
gCCATGCGCCACAATACCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACaaaa < 1:1481096/93‑1 (MQ=255)
ccATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACaaaaa > 2:4999317/1‑93 (MQ=255)
cATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAt < 1:5533949/93‑1 (MQ=255)
cATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAt > 1:3918661/1‑93 (MQ=255)
aTGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAta > 1:4402908/1‑92 (MQ=255)
aTGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGCCGCATTCGGCAAATTGCCACAAAAATg > 1:2768993/1‑93 (MQ=255)
tGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGa < 2:2013757/93‑1 (MQ=255)
tGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGa > 2:1603963/1‑93 (MQ=255)
gcgcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAc < 1:2300514/93‑1 (MQ=255)
cgcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAcc > 1:5846320/1‑93 (MQ=255)
cgcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAcc > 2:1915605/1‑93 (MQ=255)
gcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCa < 1:1109323/93‑1 (MQ=255)
ccACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCAt < 1:1008682/93‑1 (MQ=255)
cacaATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATc > 2:1657745/1‑93 (MQ=255)
acaATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCt < 2:6121680/93‑1 (MQ=255)
caATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTg < 2:5353745/93‑1 (MQ=255)
tatCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCAc < 2:4792818/93‑1 (MQ=255)
tatCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCAc > 2:1076699/1‑93 (MQ=255)
tCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCt > 2:2073473/1‑93 (MQ=255)
aCCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAt < 2:3568850/93‑1 (MQ=255)
aCCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAt < 2:2314900/93‑1 (MQ=255)
aCCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAt < 2:6026254/93‑1 (MQ=255)
aTCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATccc < 1:3135088/93‑1 (MQ=255)
tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa < 2:5726361/93‑1 (MQ=255)
tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa > 2:6040321/1‑93 (MQ=255)
tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa > 2:1682077/1‑93 (MQ=255)
tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa < 2:793251/93‑1 (MQ=255)
tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa > 1:1041077/1‑93 (MQ=255)
tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa < 1:4093624/93‑1 (MQ=255)
tctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGc > 2:3061764/1‑93 (MQ=255)
tctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGc > 1:2862570/1‑93 (MQ=255)
tcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcac < 2:2560847/93‑1 (MQ=255)
cccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCGCCTAATCCCAGcacc > 1:913438/1‑93 (MQ=255)
cccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacc > 1:211088/1‑93 (MQ=255)
cccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacc < 1:3890966/93‑1 (MQ=255)
ccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacca < 2:2771460/93‑1 (MQ=255)
ccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacca < 2:3963931/93‑1 (MQ=255)
cTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcaccac > 2:74709/1‑93 (MQ=255)
tGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCaccacc > 1:1838674/1‑93 (MQ=255)
tGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCaccacc > 2:4266497/1‑93 (MQ=255)
gATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaa < 1:5074665/93‑1 (MQ=255)
gATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaa > 1:4876979/1‑93 (MQ=255)
aTCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaaa < 1:6048589/93‑1 (MQ=255)
aTCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaaa > 2:5299931/1‑93 (MQ=255)
aTCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaaa < 1:982462/93‑1 (MQ=255)
gggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATcc > 1:4966967/1‑93 (MQ=255)
gggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATcc > 2:87285/1‑93 (MQ=255)
gggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATcc > 1:5264087/1‑93 (MQ=255)
ggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCa > 1:3592992/1‑93 (MQ=255)
gAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAg < 2:5396975/93‑1 (MQ=255)
gAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAg < 2:3840444/93‑1 (MQ=255)
gAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAg > 2:4329547/1‑93 (MQ=255)
aaCTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGt < 1:631115/93‑1 (MQ=255)
aaCTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGt > 2:2258231/1‑93 (MQ=255)
tCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCg > 2:4138511/1‑93 (MQ=255)
ccACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGc > 1:161019/1‑93 (MQ=255)
cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGGCCATCGGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc < 2:1583662/93‑1 (MQ=255)
cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc < 2:4535933/93‑1 (MQ=255)
cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc < 2:6184219/93‑1 (MQ=255)
cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc > 2:3563598/1‑93 (MQ=255)
aCGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCt < 2:2199985/93‑1 (MQ=255)
ggTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTc > 1:164327/1‑93 (MQ=255)
gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCATCAAATCCAGTCCGCCTTCa < 2:4812430/93‑1 (MQ=255)
gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa > 2:3193689/1‑93 (MQ=255)
gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa < 2:5846252/93‑1 (MQ=255)
gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa < 2:5671368/93‑1 (MQ=255)
gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa > 2:1884347/1‑93 (MQ=255)
gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa < 1:708475/93‑1 (MQ=255)
tttGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAc > 2:364375/1‑93 (MQ=255)
gCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcgcg < 2:4697857/93‑1 (MQ=255)
gCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcgcg > 1:5650412/1‑93 (MQ=255)
cTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACgcgc < 1:4810128/93‑1 (MQ=255)
cATGGAAATGGGTCGCATTCGGCAACTTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCa < 1:6086931/93‑1 (MQ=255)
aTGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCCTCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAg > 1:3383449/1‑93 (MQ=255)
ggAAATGGGTCGCATTCTGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGtt < 2:4413574/93‑1 (MQ=255)
gAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGttt > 2:1362448/1‑93 (MQ=255)
aaaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTc < 2:5546191/93‑1 (MQ=255)
aaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt < 1:4197914/93‑1 (MQ=255)
aaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt < 2:4423959/93‑1 (MQ=255)
aaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt < 2:1357035/93‑1 (MQ=255)
gggTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGAt > 1:724188/1‑93 (MQ=255)
ggTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATc > 1:252862/1‑93 (MQ=255)
ggTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATc < 1:798768/93‑1 (MQ=255)
|
AAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCA > NC_000913/3896517‑3896695
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTC > NC_000913/3896515‑3896700
|
CGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCA < SRR4302533.4694871/94‑1 (MQ=60)
CGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCA < SRR4302533.5955112/94‑1 (MQ=60)
GAAAAGTCGTCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCAT < SRR4302533.3099431/94‑1 (MQ=60)
GAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCAT < SRR4302533.2939864/94‑1 (MQ=60)
GAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCAT < SRR4302533.5009339/94‑1 (MQ=60)
AAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATT < SRR4302533.913441/94‑1 (MQ=60)
AAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATT < SRR4302533.1122973/94‑1 (MQ=60)
AAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTC < SRR4302533.1828662/94‑1 (MQ=60)
AAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCG < SRR4302533.3159512/94‑1 (MQ=60)
AGTCGCCGCCCAACTCGCCATGCGCCACAATGTCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGG < SRR4302533.1234282/94‑1 (MQ=60)
AGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGG > SRR4302533.2177205/1‑94 (MQ=60)
AGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGG < SRR4302533.2038439/94‑1 (MQ=60)
GTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGC > SRR4302533.3272786/1‑94 (MQ=60)
TCGCCGNCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCA < SRR4302533.369646/94‑1 (MQ=60)
TCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCA < SRR4302533.3417709/94‑1 (MQ=60)
CGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATT < SRR4302533.5777047/94‑1 (MQ=60)
GCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTG < SRR4302533.3931699/94‑1 (MQ=60)
GCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTG < SRR4302533.3262493/94‑1 (MQ=60)
CCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGC > SRR4302533.1796218/1‑94 (MQ=60)
CCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGC > SRR4302533.1362389/1‑94 (MQ=60)
CCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCC > SRR4302533.6187743/1‑94 (MQ=60)
CAACTCGCCATGCGCCACAATATCAACCAGCTCTCCCTGGATCGGGAACTCCGCGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCA < SRR4302533.3359588/94‑1 (MQ=60)
CTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAA > SRR4302533.3670490/1‑94 (MQ=60)
TCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAA < SRR4302533.3383034/94‑1 (MQ=60)
GCCATGCGCCACAATACCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAA < SRR4302533.1490039/94‑1 (MQ=60)
CCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAT > SRR4302533.3942590/1‑94 (MQ=60)
CCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAT < SRR4302533.571043/94‑1 (MQ=60)
CATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATG < SRR4302533.5567359/94‑1 (MQ=60)
CATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATA > SRR4302533.4429491/1‑94 (MQ=60)
CATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGCCGCATTCGGCAAATTGCCACAAAAATG > SRR4302533.2785986/1‑94 (MQ=60)
CATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGGTTGCTCATGGAAATCGGTCGCATTCGGCAAATTGCCACAAAAATA > SRR4302533.2077787/1‑94 (MQ=60)
TGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAC < SRR4302533.5096014/94‑1 (MQ=60)
CGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAC < SRR4302533.4366625/94‑1 (MQ=60)
GCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACC < SRR4302533.1002289/94‑1 (MQ=60)
GCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACC > SRR4302533.5881665/1‑94 (MQ=60)
GCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACC < SRR4302533.2314772/94‑1 (MQ=60)
GCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCAT < SRR4302533.1115907/94‑1 (MQ=60)
GCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCAT < SRR4302533.832999/94‑1 (MQ=60)
GCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCAT > SRR4302533.2171140/1‑94 (MQ=60)
CCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATC < SRR4302533.1014585/94‑1 (MQ=60)
CACAATATCAACCATCTCTCTCTGGATCGGGGACTCCACGGTTTGCTCCTAGAAATGGGTCGCAATCGGCATATTGACACAAAAATGACCATCT > SRR4302533.985677/1‑94 (MQ=60)
ACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTG < SRR4302533.515294/94‑1 (MQ=60)
CAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGC < SRR4302533.5599247/94‑1 (MQ=60)
TCAACCATCTCTCCCTGGATCGGGAACTCCACGGCTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTA > SRR4302533.4008627/1‑94 (MQ=60)
CAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAA > SRR4302533.2641624/1‑94 (MQ=60)
AACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAT < SRR4302533.4944195/94‑1 (MQ=60)
ACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATC > SRR4302533.1628171/1‑94 (MQ=60)
ATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCA < SRR4302533.3154366/94‑1 (MQ=60)
ATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCA > SRR4302533.1047197/1‑94 (MQ=60)
TCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAG < SRR4302533.4118544/94‑1 (MQ=60)
TCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAG < SRR4302533.4302423/94‑1 (MQ=60)
TCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAG < SRR4302533.152220/94‑1 (MQ=60)
TCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAG > SRR4302533.1015496/1‑94 (MQ=60)
CTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGC > SRR4302533.2880180/1‑94 (MQ=60)
TCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCGCCTAATCCCAGCACC > SRR4302533.918806/1‑94 (MQ=60)
TCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACC > SRR4302533.1106343/1‑94 (MQ=60)
TCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACC > SRR4302533.212418/1‑94 (MQ=60)
TCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACC > SRR4302533.2721924/1‑94 (MQ=60)
CCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCA > SRR4302533.719819/1‑94 (MQ=60)
CCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCA < SRR4302533.3914708/94‑1 (MQ=60)
CCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCAC < SRR4302533.2196134/94‑1 (MQ=60)
CCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCAC > SRR4302533.3954090/1‑94 (MQ=60)
CTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACC > SRR4302533.718564/1‑94 (MQ=60)
CTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACC > SRR4302533.736191/1‑94 (MQ=60)
CTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACC > SRR4302533.1849889/1‑94 (MQ=60)
GGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAA > SRR4302533.4906527/1‑94 (MQ=60)
GGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAA > SRR4302533.5319743/1‑94 (MQ=60)
GATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAA < SRR4302533.5105339/94‑1 (MQ=60)
ATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAAT > SRR4302533.5812441/1‑94 (MQ=60)
ATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAAT < SRR4302533.6085235/94‑1 (MQ=60)
ATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAAT < SRR4302533.988219/94‑1 (MQ=60)
TCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATC < SRR4302533.1454565/94‑1 (MQ=60)
CGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCC > SRR4302533.5295683/1‑94 (MQ=60)
CGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCC > SRR4302533.4997078/1‑94 (MQ=60)
CGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCC > SRR4302533.3281527/1‑94 (MQ=60)
CGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCA > SRR4302533.1284997/1‑94 (MQ=60)
GGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCA > SRR4302533.3615104/1‑94 (MQ=60)
GGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCCCCAAATCCAG < SRR4302533.1536123/94‑1 (MQ=60)
AACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTC < SRR4302533.2916809/94‑1 (MQ=60)
AACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTC < SRR4302533.634825/94‑1 (MQ=60)
CTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCG > SRR4302533.219040/1‑94 (MQ=60)
TCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGC > SRR4302533.2402655/1‑94 (MQ=60)
TCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGC > SRR4302533.162045/1‑94 (MQ=60)
CCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCC > SRR4302533.4872039/1‑94 (MQ=60)
CACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCT > SRR4302533.5881989/1‑94 (MQ=60)
ACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTT > SRR4302533.4891896/1‑94 (MQ=60)
ACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTT < SRR4302533.6086045/94‑1 (MQ=60)
ACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTT < SRR4302533.1346372/94‑1 (MQ=60)
CGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTC > SRR4302533.165371/1‑94 (MQ=60)
CGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTC > SRR4302533.4560745/1‑94 (MQ=60)
GTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAC < SRR4302533.712658/94‑1 (MQ=60)
GTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAC > SRR4302533.5092901/1‑94 (MQ=60)
GTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAC < SRR4302533.366465/94‑1 (MQ=60)
TTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACG < SRR4302533.379636/94‑1 (MQ=60)
TTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACG < SRR4302533.6256554/94‑1 (MQ=60)
TTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACG > SRR4302533.2116621/1‑94 (MQ=60)
TGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCG > SRR4302533.5719571/1‑94 (MQ=60)
TGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCG > SRR4302533.5684568/1‑94 (MQ=60)
GCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGC < SRR4302533.2871321/94‑1 (MQ=60)
CTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCC < SRR4302533.4839282/94‑1 (MQ=60)
CATGGAAATGGGTCGCATTCGGCAACTTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAG < SRR4302533.6123729/94‑1 (MQ=60)
CATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCCTCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAG > SRR4302533.3404337/1‑94 (MQ=60)
ATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGT > SRR4302533.4180395/1‑94 (MQ=60)
ATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGT > SRR4302533.302642/1‑94 (MQ=60)
ATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGT > SRR4302533.3610365/1‑94 (MQ=60)
TGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTT < SRR4302533.1062432/94‑1 (MQ=60)
AATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTG < SRR4302533.4223324/94‑1 (MQ=60)
AATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTG < SRR4302533.5365829/94‑1 (MQ=60)
ATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGA > SRR4302533.701623/1‑94 (MQ=60)
TGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGAT > SRR4302533.728468/1‑94 (MQ=60)
TGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGAT < SRR4302533.1936467/94‑1 (MQ=60)
GGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATC < SRR4302533.5889807/94‑1 (MQ=60)
GGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATC > SRR4302533.254416/1‑94 (MQ=60)
GGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCA < SRR4302533.803469/94‑1 (MQ=60)
TCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATG > SRR4302533.931462/1‑94 (MQ=60)
CATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTC > SRR4302533.2181204/1‑94 (MQ=60)
CATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTC > SRR4302533.1136791/1‑94 (MQ=60)
|
CGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTC > NC_000913/3896515‑3896700
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
