Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,918,274 |
T→C |
K81K (AAA→AAG) |
atpF ← |
membrane‑bound ATP synthase, F0 sector, subunit b |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,918,274 | 0 | T | C | 100.0%
| 861.8
/ NA
| 265 | K81K (AAA→AAG) | atpF | membrane‑bound ATP synthase, F0 sector, subunit b |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (138/127); total (138/127) |
Only 100 of 275 total aligned reads displayed.
GGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTT > NC_000913/3918184‑3918363
|
gCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGcttt > 1:6042705/1‑92 (MQ=255)
gCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTg < 1:20646/93‑1 (MQ=255)
cTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGt < 1:5418360/93‑1 (MQ=255)
ttCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGtt < 2:175710/93‑1 (MQ=255)
ttCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGtt < 2:3173373/93‑1 (MQ=255)
ttCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGtt < 2:3028786/93‑1 (MQ=255)
ttCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGtt < 2:5414096/93‑1 (MQ=255)
aaTTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGc > 1:1873853/1‑93 (MQ=255)
tCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGc > 1:4042969/1‑93 (MQ=255)
tCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGc > 1:5782246/1‑93 (MQ=255)
ccGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCt < 1:4750988/93‑1 (MQ=255)
ccGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCt < 1:3271719/93‑1 (MQ=255)
ccGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCt < 1:2250726/93‑1 (MQ=255)
cgcctgcgcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTc > 2:3690060/1‑93 (MQ=255)
ctgcgcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCgat < 2:3940100/93‑1 (MQ=255)
tgcgcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCgatg < 2:1777318/93‑1 (MQ=255)
tgcgcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCgatg > 1:4927859/1‑93 (MQ=255)
gcgcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCgatga < 2:3863735/93‑1 (MQ=255)
gcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGAtt < 1:4873953/93‑1 (MQ=255)
cctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTa > 1:2490766/1‑93 (MQ=255)
cctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTa < 2:2281908/93‑1 (MQ=255)
ctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTAc < 1:2604857/93‑1 (MQ=255)
ctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTAc < 2:2037847/93‑1 (MQ=255)
tgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTAcc < 1:1977848/93‑1 (MQ=255)
tgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTAcc > 1:5692965/1‑93 (MQ=255)
tgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTAcc < 2:2372210/93‑1 (MQ=255)
tgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTAcc > 2:5193389/1‑93 (MQ=255)
ggCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTg < 2:2754403/93‑1 (MQ=255)
ggCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTg < 1:2944489/93‑1 (MQ=255)
gCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTgg > 2:4929721/1‑93 (MQ=255)
gCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTCCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTgg > 1:4433011/1‑93 (MQ=255)
ccACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTggg > 2:2618569/1‑93 (MQ=255)
cACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGc > 1:1753469/1‑93 (MQ=255)
cACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGc > 1:3426267/1‑93 (MQ=255)
cACGATTTTAGTACGTGCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGATCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGc < 1:988557/93‑1 (MQ=255)
gATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTc > 2:4602089/1‑93 (MQ=255)
ttttAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcg < 2:2088026/93‑1 (MQ=255)
ttAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgct < 2:1600651/93‑1 (MQ=255)
aGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgcttt < 1:5381125/93‑1 (MQ=255)
aGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgcttt > 2:4579099/1‑93 (MQ=255)
gTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgctttc < 1:4882217/93‑1 (MQ=255)
tACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgctttcg > 2:3600521/1‑93 (MQ=255)
aCGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgctttcgc < 1:6132779/93‑1 (MQ=255)
aCGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgctttcgc > 2:3516747/1‑93 (MQ=255)
cGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgctttcgct > 1:2342007/1‑93 (MQ=255)
ttCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCcgctttcgcttt > 2:3322049/1‑93 (MQ=255)
ccTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCttttt > 1:3049884/1‑93 (MQ=255)
ccTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCttttt > 2:1572926/1‑93 (MQ=255)
cTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCtttttt > 2:5848675/1‑93 (MQ=255)
tGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTc > 2:4329389/1‑93 (MQ=255)
gTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCa < 2:5336902/93‑1 (MQ=255)
cTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCt > 1:3778517/1‑93 (MQ=255)
tGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTg < 2:1446906/93‑1 (MQ=255)
tGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCCCTTTCGCTTTATTCAGCTg < 2:6160012/93‑1 (MQ=255)
ccTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggt < 1:1006522/93‑1 (MQ=255)
ccTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggt < 1:5338593/93‑1 (MQ=255)
cTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggtc < 2:4768591/93‑1 (MQ=255)
cTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggtc < 1:1274863/93‑1 (MQ=255)
tCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggtcg < 2:5638606/93‑1 (MQ=255)
aGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggtcggt > 2:5949975/1‑93 (MQ=255)
gCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggtcggtc > 2:5549376/1‑93 (MQ=255)
gCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTggtcggtc < 1:4225974/93‑1 (MQ=255)
ttCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTcgcg > 2:4057916/1‑93 (MQ=255)
tCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCgcgc < 2:2220533/93‑1 (MQ=255)
tCGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCgcgc > 2:2519561/1‑93 (MQ=255)
cGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCt < 2:5008467/93‑1 (MQ=255)
cGCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCt < 1:2804925/93‑1 (MQ=255)
gCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTg < 1:3197661/93‑1 (MQ=255)
gCTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTg < 1:6228397/93‑1 (MQ=255)
cTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTgg > 1:4526621/1‑93 (MQ=255)
cTTCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTgg > 2:703328/1‑93 (MQ=255)
ttCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGc > 1:6203205/1‑93 (MQ=255)
ttCGTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGc > 2:5311954/1‑93 (MQ=255)
cGTCCAGAATCTGCGAGCGGCGCTTGCTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCt < 2:3729516/93‑1 (MQ=255)
gTCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCtt < 1:3113752/93‑1 (MQ=255)
tCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCttt < 1:3690060/93‑1 (MQ=255)
tCCAGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCttt < 2:5135862/93‑1 (MQ=255)
aGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGca > 2:1217571/1‑93 (MQ=255)
aGAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGca > 2:1737926/1‑93 (MQ=255)
gAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaa < 1:563928/93‑1 (MQ=255)
gAATCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaa > 2:4614256/1‑93 (MQ=255)
aaTCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcagg > 1:3514047/1‑91 (MQ=255)
tCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggt < 1:4340794/93‑1 (MQ=255)
tCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggt < 1:1636091/93‑1 (MQ=255)
tCTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggt < 1:4037344/93‑1 (MQ=255)
cTGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtc < 2:2098181/93‑1 (MQ=255)
tGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtca > 2:839816/1‑93 (MQ=255)
tGCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtca < 2:1307635/93‑1 (MQ=255)
gCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtcaa > 2:4341622/1‑93 (MQ=255)
gCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtcaa < 1:5321429/93‑1 (MQ=255)
gCGAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtcaa < 1:662739/93‑1 (MQ=255)
gAGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtcaagg > 1:2830096/1‑93 (MQ=255)
aGCGGCGCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGcaaggtcaaggt > 1:313376/1‑93 (MQ=255)
gcggcgCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCaaggtcaaggtc > 1:440631/1‑93 (MQ=255)
gcggcgCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCaaggtcaaggtc > 2:5662268/1‑93 (MQ=255)
gcggcgCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCaaggtcaaggtc < 1:148516/93‑1 (MQ=255)
cggcgCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTcc > 1:5164572/1‑93 (MQ=255)
cggcgCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTcc < 2:5713878/93‑1 (MQ=255)
ggcgCTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCt < 1:5930078/93‑1 (MQ=255)
gcgcTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCtt > 1:5523472/1‑93 (MQ=255)
|
GGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTT > NC_000913/3918184‑3918363
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑TTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGT > NC_000913/3918181‑3918367
|
CTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑C > SRR4302533.599144/1‑94 (MQ=60)
TCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CT < SRR4302533.4690489/94‑1 (MQ=60)
GGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTT > SRR4302533.6079315/1‑94 (MQ=60)
GGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTG < SRR4302533.3140133/94‑1 (MQ=60)
GGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTG > SRR4302533.1948643/1‑94 (MQ=60)
GCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGT > SRR4302533.5367270/1‑94 (MQ=60)
GCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGT < SRR4302533.20783/94‑1 (MQ=60)
CTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTT < SRR4302533.5450953/94‑1 (MQ=60)
TTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTC < SRR4302533.4062534/94‑1 (MQ=60)
TTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTC < SRR4302533.2489749/94‑1 (MQ=60)
TTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTC > SRR4302533.4908526/1‑94 (MQ=60)
TTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTC > SRR4302533.4592683/1‑94 (MQ=60)
TTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTC < SRR4302533.1610225/94‑1 (MQ=60)
CAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGC > SRR4302533.1885272/1‑94 (MQ=60)
AATTCCCGCCTGCGCCTGGCCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCC < SRR4302533.44981/94‑1 (MQ=60)
TTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTG < SRR4302533.3528404/94‑1 (MQ=60)
TTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTG < SRR4302533.4942226/94‑1 (MQ=60)
TTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGC > SRR4302533.5817167/1‑94 (MQ=60)
TTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGC > SRR4302533.4067578/1‑94 (MQ=60)
TCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCT < SRR4302533.6139897/94‑1 (MQ=60)
TCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCT < SRR4302533.6293265/94‑1 (MQ=60)
CCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTC < SRR4302533.4779792/94‑1 (MQ=60)
CCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTC < SRR4302533.3291909/94‑1 (MQ=60)
CCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTC < SRR4302533.2264638/94‑1 (MQ=60)
GCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGA > SRR4302533.942406/1‑94 (MQ=60)
CTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATG > SRR4302533.3630126/1‑94 (MQ=60)
CTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATG > SRR4302533.1292424/1‑94 (MQ=60)
CTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATG > SRR4302533.3387058/1‑94 (MQ=60)
CTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATG > SRR4302533.4957702/1‑94 (MQ=60)
CTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATG < SRR4302533.5691228/94‑1 (MQ=60)
GCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGAT < SRR4302533.5308868/94‑1 (MQ=60)
CGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATT < SRR4302533.3799418/94‑1 (MQ=60)
GCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTA < SRR4302533.4903484/94‑1 (MQ=60)
GCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTA > SRR4302533.2506109/1‑94 (MQ=60)
CTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACC < SRR4302533.2620859/94‑1 (MQ=60)
CTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACC > SRR4302533.5727345/1‑94 (MQ=60)
TGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGTATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCT < SRR4302533.492594/94‑1 (MQ=60)
TGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCT < SRR4302533.1989960/94‑1 (MQ=60)
GGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTG < SRR4302533.586758/94‑1 (MQ=60)
TGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGG < SRR4302533.1879203/94‑1 (MQ=60)
GGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGG < SRR4302533.2962459/94‑1 (MQ=60)
GGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTCCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGG > SRR4302533.4459810/1‑94 (MQ=60)
GCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGG < SRR4302533.2030359/94‑1 (MQ=60)
CCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGC > SRR4302533.1501775/1‑94 (MQ=60)
CCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGC > SRR4302533.1764149/1‑94 (MQ=60)
CCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGC > SRR4302533.3447433/1‑94 (MQ=60)
CACGATTTTAGTACGTGCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGATCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCT < SRR4302533.994341/94‑1 (MQ=60)
ACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTT > SRR4302533.5569172/1‑94 (MQ=60)
GATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCC > SRR4302533.2531033/1‑94 (MQ=60)
GATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCC < SRR4302533.4876915/94‑1 (MQ=60)
TTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGC > SRR4302533.4826633/1‑94 (MQ=60)
TTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCT > SRR4302533.4441584/1‑94 (MQ=60)
AGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTC < SRR4302533.5431624/94‑1 (MQ=60)
AGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTC < SRR4302533.5793452/94‑1 (MQ=60)
AGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTC < SRR4302533.5413455/94‑1 (MQ=60)
GTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCG < SRR4302533.4911793/94‑1 (MQ=60)
GTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCG > SRR4302533.2829597/1‑94 (MQ=60)
TACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGC > SRR4302533.205729/1‑94 (MQ=60)
ACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCT > SRR4302533.219285/1‑94 (MQ=60)
ACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCT < SRR4302533.3127382/94‑1 (MQ=60)
ACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCT > SRR4302533.2356507/1‑94 (MQ=60)
ACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCT < SRR4302533.6169729/94‑1 (MQ=60)
CGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTT > SRR4302533.3205546/1‑94 (MQ=60)
CGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTT > SRR4302533.3314930/1‑94 (MQ=60)
GTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTT > SRR4302533.1353301/1‑94 (MQ=60)
GTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTT > SRR4302533.6175395/1‑94 (MQ=60)
TTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTT > SRR4302533.4202566/1‑94 (MQ=60)
TCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTT > SRR4302533.3068551/1‑94 (MQ=60)
TCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTT > SRR4302533.2279894/1‑94 (MQ=60)
CCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTT < SRR4302533.4361540/94‑1 (MQ=60)
CCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTT > SRR4302533.3766832/1‑94 (MQ=60)
CTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTC < SRR4302533.1729297/94‑1 (MQ=60)
TGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCA < SRR4302533.1962680/94‑1 (MQ=60)
TGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCA > SRR4302533.3878466/1‑94 (MQ=60)
GTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAG < SRR4302533.4490061/94‑1 (MQ=60)
GTTCTGCCTCAGCTTTCGCTGCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAG < SRR4302533.2797958/94‑1 (MQ=60)
TCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCATCT < SRR4302533.6126076/94‑1 (MQ=60)
TCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCT > SRR4302533.3801669/1‑94 (MQ=60)
TCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCT < SRR4302533.4371314/94‑1 (MQ=60)
CTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGTCTTCCGCTTTCGCTTTTTTCAGCTG < SRR4302533.5523687/94‑1 (MQ=60)
CTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTG < SRR4302533.6243154/94‑1 (MQ=60)
CTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTG > SRR4302533.1677891/1‑94 (MQ=60)
CTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTG > SRR4302533.537920/1‑94 (MQ=60)
TGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGG < SRR4302533.989982/94‑1 (MQ=60)
GCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGT < SRR4302533.1137971/94‑1 (MQ=60)
CCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTC < SRR4302533.5370604/94‑1 (MQ=60)
CCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTC > SRR4302533.5034925/1‑94 (MQ=60)
CCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTC < SRR4302533.1012413/94‑1 (MQ=60)
CTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCG < SRR4302533.1282530/94‑1 (MQ=60)
CTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCG < SRR4302533.3219214/94‑1 (MQ=60)
TCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGG > SRR4302533.3290780/1‑94 (MQ=60)
TCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGG > SRR4302533.2425317/1‑94 (MQ=60)
TCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGG > SRR4302533.2796999/1‑94 (MQ=60)
CAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGT > SRR4302533.6265419/1‑94 (MQ=60)
CAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGT > SRR4302533.2199500/1‑94 (MQ=60)
CAGCGTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGT < SRR4302533.294789/94‑1 (MQ=60)
AGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTC > SRR4302533.5957986/1‑94 (MQ=60)
AGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTC > SRR4302533.5975878/1‑94 (MQ=60)
AGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTC > SRR4302533.3087920/1‑94 (MQ=60)
GCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCG < SRR4302533.4251531/94‑1 (MQ=60)
TTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCG > SRR4302533.5201305/1‑94 (MQ=60)
TTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCG < SRR4302533.5490010/94‑1 (MQ=60)
TCGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGGTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCT > SRR4302533.2868185/1‑94 (MQ=60)
CGCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTG < SRR4302533.2822189/94‑1 (MQ=60)
GCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGG < SRR4302533.6265708/94‑1 (MQ=60)
GCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGG < SRR4302533.3217340/94‑1 (MQ=60)
GCTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGG > SRR4302533.4554028/1‑94 (MQ=60)
CTTCGTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGC > SRR4302533.6240407/1‑94 (MQ=60)
GTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTT > SRR4302533.6217902/1‑94 (MQ=60)
GTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTT < SRR4302533.3132903/94‑1 (MQ=60)
GTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTT > SRR4302533.3207913/1‑94 (MQ=60)
GTCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTT > SRR4302533.5061660/1‑94 (MQ=60)
TCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTG < SRR4302533.3712729/94‑1 (MQ=60)
TCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTG > SRR4302533.3833279/1‑94 (MQ=60)
TCCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTG < SRR4302533.5371064/94‑1 (MQ=60)
CCAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGC > SRR4302533.2548452/1‑94 (MQ=60)
CAGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCA > SRR4302533.2989233/1‑94 (MQ=60)
AGAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAA > SRR4302533.2993805/1‑94 (MQ=60)
GAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAGG > SRR4302533.3535709/1‑94 (MQ=60)
GAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAG < SRR4302533.567269/94‑1 (MQ=60)
GAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAG < SRR4302533.5686552/94‑1 (MQ=60)
GAATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAG < SRR4302533.5421469/94‑1 (MQ=60)
AATCTGCGAGCGGCG‑CTTGTTCGCCTGCTTGATGATTACCTGGTCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGG < SRR4302533.4635953/94‑1 (MQ=60)
ATCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGT > SRR4302533.3659872/1‑94 (MQ=60)
TCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTC < SRR4302533.4061914/94‑1 (MQ=60)
TCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTC < SRR4302533.1645998/94‑1 (MQ=60)
TCTGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTC < SRR4302533.4366957/94‑1 (MQ=60)
TGCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAA > SRR4302533.4382258/1‑94 (MQ=60)
GCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAG < SRR4302533.5353319/94‑1 (MQ=60)
GCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAG < SRR4302533.5774807/94‑1 (MQ=60)
GCGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAG < SRR4302533.666653/94‑1 (MQ=60)
CGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGG > SRR4302533.2847513/1‑94 (MQ=60)
CGAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGG > SRR4302533.4534810/1‑94 (MQ=60)
GAGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGT > SRR4302533.315292/1‑94 (MQ=60)
AGCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTC > SRR4302533.443262/1‑94 (MQ=60)
GCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCC > SRR4302533.5195759/1‑94 (MQ=60)
GCGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCC < SRR4302533.149465/94‑1 (MQ=60)
CGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCT < SRR4302533.432176/94‑1 (MQ=60)
CGGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCGGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCT < SRR4302533.4086779/94‑1 (MQ=60)
GGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTT > SRR4302533.5556822/1‑94 (MQ=60)
GGCG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTT < SRR4302533.5965928/94‑1 (MQ=60)
CG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTAT < SRR4302533.2562336/94‑1 (MQ=60)
CG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTAT < SRR4302533.111891/94‑1 (MQ=60)
CG‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTAT < SRR4302533.5457351/94‑1 (MQ=60)
G‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATG > SRR4302533.4235154/1‑94 (MQ=60)
G‑CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATG > SRR4302533.1110882/1‑94 (MQ=60)
CTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGT < SRR4302533.815837/94‑1 (MQ=60)
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CTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG‑TTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGT > NC_000913/3918181‑3918367
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |