Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,945,351 |
+C |
coding (1/600 nt)
coding (240/240 nt) |
yifDA ←
yifDA ← |
transcription regulator
transcription regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,945,350 | 1 | . | C | 100.0%
| 875.7
/ NA
| 266 | E81G (GAG→GGG) | yifDA | transcription regulator |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (114/152); total (114/152) |
Only 100 of 288 total aligned reads displayed.
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑CTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCT > NC_000913/3945258‑3945437
|
cAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACct‑c > 1:3164691/1‑93 (MQ=255)
aGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACct‑cct < 1:1189183/93‑3 (MQ=255)
tCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACg < 2:1298132/93‑1 (MQ=255)
ccAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACggg > 1:2635098/1‑93 (MQ=255)
cAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGggc < 1:2155869/93‑1 (MQ=255)
aGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGggcg < 2:2672039/93‑1 (MQ=255)
gCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGggcgg > 2:2546909/1‑93 (MQ=255)
cACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGcc > 1:6001135/1‑93 (MQ=255)
cACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGcc > 2:4183983/1‑93 (MQ=255)
aCTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCt > 1:1047209/1‑93 (MQ=255)
cTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTg < 1:3900806/93‑1 (MQ=255)
gATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGcc < 1:4987234/93‑1 (MQ=255)
tAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAgg > 2:2765649/1‑93 (MQ=255)
aaGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGt > 1:5471894/1‑93 (MQ=255)
aaGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGt > 1:1360788/1‑93 (MQ=255)
aaGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGt < 2:2223824/93‑1 (MQ=255)
aGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTg > 2:4955138/1‑93 (MQ=255)
aGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTg < 2:3588298/93‑1 (MQ=255)
aGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTg > 2:3455305/1‑93 (MQ=255)
aTACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTc > 1:4651175/1‑93 (MQ=255)
tACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCa > 1:2776326/1‑93 (MQ=255)
tACATACCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCa < 2:1894687/93‑1 (MQ=255)
aCATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCAt < 1:2541154/93‑1 (MQ=255)
aTTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGa < 1:3006491/93‑1 (MQ=255)
aTTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGa < 1:742875/93‑1 (MQ=255)
ccACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGt < 2:701882/93‑1 (MQ=255)
ccACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGt < 2:5629619/93‑1 (MQ=255)
cacaACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGtt > 1:5207815/1‑93 (MQ=255)
acaACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGttt > 2:2442877/1‑93 (MQ=255)
acaACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGttt > 2:539073/1‑93 (MQ=255)
acaACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGttt < 2:3384/93‑1 (MQ=255)
caACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTc < 2:5038618/93‑1 (MQ=255)
aaCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCt < 2:2581323/93‑1 (MQ=255)
aaCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCt < 1:962318/93‑1 (MQ=255)
aaCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCt < 1:6203555/93‑1 (MQ=255)
aCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCTCCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTg < 2:587537/93‑1 (MQ=255)
aCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTg > 2:752708/1‑93 (MQ=255)
aCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTg < 2:2402948/93‑1 (MQ=255)
aCGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTg > 1:660398/1‑93 (MQ=255)
gAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGCGCTCATGAGCGTTTCTGCa > 1:1085041/1‑93 (MQ=255)
ggCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATa < 1:3824550/93‑1 (MQ=255)
ggCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATa > 2:2884441/1‑93 (MQ=255)
gcgcTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATaa < 2:3221538/93‑1 (MQ=255)
gcgcTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATaa < 2:4791619/93‑1 (MQ=255)
cgcTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAg < 1:76440/93‑1 (MQ=255)
cTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGc < 1:3695731/93‑1 (MQ=255)
tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa < 2:6192282/93‑1 (MQ=255)
tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa > 1:6263756/1‑93 (MQ=255)
tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa < 1:6078743/93‑1 (MQ=255)
tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa < 1:2880212/93‑1 (MQ=255)
gCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagt < 2:1066274/93‑1 (MQ=255)
gCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagt < 1:1702895/93‑1 (MQ=255)
gCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagt < 1:3268732/93‑1 (MQ=255)
cACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagta < 2:5846484/93‑1 (MQ=255)
cACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagta < 2:916424/93‑1 (MQ=255)
aCCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagtag < 2:4372252/93‑1 (MQ=255)
ccGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagtagt > 2:1388928/1‑93 (MQ=255)
aTAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGtttt > 2:4573075/1‑93 (MQ=255)
aGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTc > 2:4654295/1‑93 (MQ=255)
aGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTc > 1:5401386/1‑93 (MQ=255)
aGAAAACTCGTAATGTCGTAAGGTATGCGCCACCTCCTTACGGGCGGTCTGCCAGGTGATCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTc < 2:6277376/93‑1 (MQ=255)
gAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCa > 1:5895911/1‑93 (MQ=255)
gAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCa > 2:839702/1‑93 (MQ=255)
gAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCa > 1:4092036/1‑93 (MQ=255)
aaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAcc > 1:4377335/1‑93 (MQ=255)
aaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAcc < 1:5622430/93‑1 (MQ=255)
aaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAcc < 1:3972211/93‑1 (MQ=255)
aaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCg < 2:1712446/93‑1 (MQ=255)
aaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCg > 1:182285/1‑93 (MQ=255)
aCTCGTTATGTCGTGAGGTATGAGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCgg > 2:1596088/1‑93 (MQ=255)
cTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGc < 1:1762830/93‑1 (MQ=255)
cTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGc < 2:2976709/93‑1 (MQ=255)
cTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGc < 1:1972249/93‑1 (MQ=255)
cTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGc > 2:5767372/1‑93 (MQ=255)
tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa > 2:3313871/1‑93 (MQ=255)
tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa < 2:3864592/93‑1 (MQ=255)
tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa > 1:4303086/1‑93 (MQ=255)
tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa < 1:5772711/93‑1 (MQ=255)
tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa > 2:5122969/1‑93 (MQ=255)
cGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAg < 2:1846084/93‑1 (MQ=255)
gTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGc > 2:3763099/1‑93 (MQ=255)
ttATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCg < 2:3084779/93‑1 (MQ=255)
tGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCACCGGtt < 2:4103821/93‑1 (MQ=255)
gTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTa < 2:957000/93‑1 (MQ=255)
gTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGTATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAc < 1:3525227/93‑1 (MQ=255)
gTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAc > 1:81799/1‑93 (MQ=255)
gTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAc < 2:4737444/93‑1 (MQ=255)
gAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACgg > 2:2015631/1‑93 (MQ=255)
gAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACgg > 1:19131/1‑93 (MQ=255)
aGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGa > 1:630555/1‑93 (MQ=255)
tATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGatat < 1:5510726/93‑1 (MQ=255)
tATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGatat < 2:3507313/93‑1 (MQ=255)
aTGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTAAAACGGATAtt < 1:3059447/93‑1 (MQ=255)
tGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTg < 2:325194/93‑1 (MQ=255)
gcCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAACGGCAGCGGTTAAACGGATATTGttt > 2:6066377/1‑93 (MQ=255)
ccACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTc > 2:526594/1‑93 (MQ=255)
ccACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTc > 1:4420474/1‑93 (MQ=255)
ccACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGAGATTGTTTc < 2:6127805/93‑1 (MQ=255)
cACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCt > 2:5172991/1‑93 (MQ=255)
cACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCt < 1:4739011/93‑1 (MQ=255)
|
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑CTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCT > NC_000913/3945258‑3945437
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGG > NC_000913/3945258‑3945444
|
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C > SRR4302533.3184168/1‑94 (MQ=60)
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C > SRR4302533.1878971/1‑94 (MQ=60)
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C > SRR4302533.1857341/1‑94 (MQ=60)
AAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C‑CT < SRR4302533.3450942/94‑1 (MQ=60)
AAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C‑CT > SRR4302533.2951041/1‑94 (MQ=60)
AGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑Cctt < SRR4302533.3090004/94‑4 (MQ=60)
AGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑Cctt < SRR4302533.1196321/94‑4 (MQ=60)
AGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑Cctt < SRR4302533.6053302/94‑4 (MQ=60)
CGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCCCCT‑CATTAC > SRR4302533.4915843/1‑94 (MQ=60)
CCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGG > SRR4302533.2651294/1‑94 (MQ=60)
CCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGG < SRR4302533.5909486/94‑1 (MQ=60)
CCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGC < SRR4302533.5949647/94‑1 (MQ=60)
CAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCG < SRR4302533.2169142/94‑1 (MQ=60)
CCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCC > SRR4302533.6037490/1‑94 (MQ=60)
CCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCC > SRR4302533.355576/1‑94 (MQ=60)
CACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCT > SRR4302533.1053363/1‑94 (MQ=60)
ACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTG > SRR4302533.5457472/1‑94 (MQ=60)
CTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGC > SRR4302533.1087520/1‑94 (MQ=60)
CTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGC < SRR4302533.3924616/94‑1 (MQ=60)
TGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCC > SRR4302533.641166/1‑94 (MQ=60)
TGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCC < SRR4302533.4737748/94‑1 (MQ=60)
GATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCA < SRR4302533.5017472/94‑1 (MQ=60)
ATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAG > SRR4302533.728258/1‑94 (MQ=60)
TAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAGCTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGT < SRR4302533.5821634/94‑1 (MQ=60)
TAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGT > SRR4302533.5504869/1‑94 (MQ=60)
TAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGT > SRR4302533.1368963/1‑94 (MQ=60)
AGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGC < SRR4302533.325398/94‑1 (MQ=60)
AGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGC > SRR4302533.1354605/1‑94 (MQ=60)
ACATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCT < SRR4302533.2606638/94‑1 (MQ=60)
CATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTC > SRR4302533.4679356/1‑94 (MQ=60)
CATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TGACGGGCGGCCTGCCAGGTGCTC > SRR4302533.173848/1‑94 (MQ=60)
ATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCA > SRR4302533.5448135/1‑94 (MQ=60)
ATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCA > SRR4302533.2793381/1‑94 (MQ=60)
ATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCA < SRR4302533.6307653/94‑1 (MQ=60)
TACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCAT > SRR4302533.1249960/1‑94 (MQ=60)
ACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATG < SRR4302533.3029809/94‑1 (MQ=60)
ACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATG < SRR4302533.2556798/94‑1 (MQ=60)
ACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATG < SRR4302533.415755/94‑1 (MQ=60)
CATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGA > SRR4302533.6104289/1‑94 (MQ=60)
CATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGA < SRR4302533.5774680/94‑1 (MQ=60)
ATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAG < SRR4302533.4790060/94‑1 (MQ=60)
ATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAG < SRR4302533.747247/94‑1 (MQ=60)
ATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAG < SRR4302533.3024881/94‑1 (MQ=60)
TTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGC < SRR4302533.2559625/94‑1 (MQ=60)
TCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCG > SRR4302533.749063/1‑94 (MQ=60)
CCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTT > SRR4302533.5239189/1‑94 (MQ=60)
CAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCT < SRR4302533.4414133/94‑1 (MQ=60)
CAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCT < SRR4302533.3816049/94‑1 (MQ=60)
CAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCT > SRR4302533.617852/1‑94 (MQ=60)
AACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTG < SRR4302533.6240758/94‑1 (MQ=60)
AACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTG < SRR4302533.967971/94‑1 (MQ=60)
AACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTG > SRR4302533.664288/1‑94 (MQ=60)
CGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCA > SRR4302533.2892368/1‑94 (MQ=60)
CGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCA > SRR4302533.1111564/1‑94 (MQ=60)
CGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCA < SRR4302533.6245264/94‑1 (MQ=60)
CGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGCGCTCATGAGCGTTTCTGCA > SRR4302533.1091439/1‑94 (MQ=60)
GAGGCGCTGGCACCGATAGAAAACTCGTTATGCCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGTGTTTCTGCAT > SRR4302533.1588015/1‑94 (MQ=60)
AGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATA > SRR4302533.4660399/1‑94 (MQ=60)
GGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAA < SRR4302533.3847933/94‑1 (MQ=60)
GGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAA < SRR4302533.2088101/94‑1 (MQ=60)
GCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAG < SRR4302533.575311/94‑1 (MQ=60)
CGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGG > SRR4302533.1752340/1‑94 (MQ=60)
CGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGG < SRR4302533.76933/94‑1 (MQ=60)
CGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGG > SRR4302533.3949067/1‑94 (MQ=60)
GCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGC > SRR4302533.2488419/1‑94 (MQ=60)
CTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCA < SRR4302533.3718432/94‑1 (MQ=60)
CTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCA > SRR4302533.6301195/1‑94 (MQ=60)
CTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCA < SRR4302533.5162468/94‑1 (MQ=60)
TGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAG < SRR4302533.2897932/94‑1 (MQ=60)
TGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAG < SRR4302533.6115508/94‑1 (MQ=60)
TGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAG < SRR4302533.5531466/94‑1 (MQ=60)
TGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAG < SRR4302533.4241367/94‑1 (MQ=60)
GGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGT < SRR4302533.3086717/94‑1 (MQ=60)
GCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTA < SRR4302533.1713212/94‑1 (MQ=60)
GCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTA < SRR4302533.3288899/94‑1 (MQ=60)
CACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAG < SRR4302533.6267321/94‑1 (MQ=60)
ACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGT < SRR4302533.5133655/94‑1 (MQ=60)
CCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTT > SRR4302533.2889202/1‑94 (MQ=60)
CGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTT > SRR4302533.6310776/1‑94 (MQ=60)
CGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTT > SRR4302533.5361732/1‑94 (MQ=60)
CGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTT > SRR4302533.2711795/1‑94 (MQ=60)
GATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTT > SRR4302533.5634432/1‑94 (MQ=60)
ATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTT > SRR4302533.4349138/1‑94 (MQ=60)
TAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTC < SRR4302533.5539330/94‑1 (MQ=60)
TAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTC > SRR4302533.5433843/1‑94 (MQ=60)
AGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCA > SRR4302533.3701170/1‑94 (MQ=60)
AGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCA > SRR4302533.4116945/1‑94 (MQ=60)
AGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCA > SRR4302533.5931514/1‑94 (MQ=60)
AAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACC > SRR4302533.4403762/1‑94 (MQ=60)
AAAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACC > SRR4302533.2289145/1‑94 (MQ=60)
AAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCG < SRR4302533.5656413/94‑1 (MQ=60)
AAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCG > SRR4302533.183418/1‑94 (MQ=60)
AAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCG < SRR4302533.6232652/94‑1 (MQ=60)
AAACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCG < SRR4302533.3996401/94‑1 (MQ=60)
AACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGG > SRR4302533.3815168/1‑94 (MQ=60)
AACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGC > SRR4302533.947784/1‑94 (MQ=60)
ACTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGC > SRR4302533.3074703/1‑94 (MQ=60)
CTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCA > SRR4302533.808367/1‑94 (MQ=60)
CTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCA > SRR4302533.4328976/1‑94 (MQ=60)
CTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCA < SRR4302533.1984319/94‑1 (MQ=60)
CTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCA < SRR4302533.1773568/94‑1 (MQ=60)
CTCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCA > SRR4302533.765648/1‑94 (MQ=60)
TCGTTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAG < SRR4302533.5807569/94‑1 (MQ=60)
TTATGTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGG > SRR4302533.874757/1‑94 (MQ=60)
GTCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAA < SRR4302533.39186/94‑1 (MQ=60)
TCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAA > SRR4302533.2671550/1‑94 (MQ=60)
TCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAA < SRR4302533.436395/94‑1 (MQ=60)
TCGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAA > SRR4302533.741413/1‑94 (MQ=60)
CGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAC > SRR4302533.82318/1‑94 (MQ=60)
CGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAC > SRR4302533.3856590/1‑94 (MQ=60)
CGTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAC < SRR4302533.1481588/94‑1 (MQ=60)
GTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGTATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACG < SRR4302533.3546952/94‑1 (MQ=60)
GTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACG > SRR4302533.1930192/1‑94 (MQ=60)
GTGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACG < SRR4302533.5979264/94‑1 (MQ=60)
TGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGG > SRR4302533.19258/1‑94 (MQ=60)
TGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGG > SRR4302533.3955353/1‑94 (MQ=60)
TGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGG < SRR4302533.5267605/94‑1 (MQ=60)
TGAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGG < SRR4302533.2955399/94‑1 (MQ=60)
GAGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGA > SRR4302533.634263/1‑94 (MQ=60)
AGGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGAT < SRR4302533.405632/94‑1 (MQ=60)
GGTATGCGCCACCTCC‑TTACGGTTGTACTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATA < SRR4302533.1820427/94‑1 (MQ=60)
GGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATA < SRR4302533.4798726/94‑1 (MQ=60)
GGTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATA < SRR4302533.1821005/94‑1 (MQ=60)
GTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATAT < SRR4302533.4653476/94‑1 (MQ=60)
GTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATAT < SRR4302533.1956233/94‑1 (MQ=60)
GTATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATAT < SRR4302533.406042/94‑1 (MQ=60)
TATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATT < SRR4302533.5543995/94‑1 (MQ=60)
TATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATT > SRR4302533.1195363/1‑94 (MQ=60)
ATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTG > SRR4302533.4712844/1‑94 (MQ=60)
ATGCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTAAAACGGATATTG < SRR4302533.3078221/94‑1 (MQ=60)
GCGCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTT < SRR4302533.3456307/94‑1 (MQ=60)
GCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTT > SRR4302533.984168/1‑94 (MQ=60)
GCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTC < SRR4302533.769837/94‑1 (MQ=60)
GCCACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTC > SRR4302533.4447202/1‑94 (MQ=60)
CACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATCTTGTTTCTG > SRR4302533.5190270/1‑94 (MQ=60)
CACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTG > SRR4302533.6199309/1‑94 (MQ=60)
CACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTG < SRR4302533.4767746/94‑1 (MQ=60)
CACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTG < SRR4302533.1651004/94‑1 (MQ=60)
CACCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTG > SRR4302533.957082/1‑94 (MQ=60)
ccctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGT < SRR4302533.1321117/89‑1 (MQ=60)
CCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTG < SRR4302533.1176669/94‑1 (MQ=60)
CCTCC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTG < SRR4302533.512100/94‑1 (MQ=60)
ctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGG < SRR4302533.998602/91‑1 (MQ=60)
ctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGG > SRR4302533.1408822/4‑94 (MQ=60)
ctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGG > SRR4302533.6266691/4‑94 (MQ=60)
ctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGG > SRR4302533.5330333/4‑94 (MQ=60)
ctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGG > SRR4302533.4982529/4‑94 (MQ=60)
ctcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGG < SRR4302533.4702018/91‑1 (MQ=60)
tcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGC < SRR4302533.3803886/92‑1 (MQ=60)
tcC‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGC < SRR4302533.4901049/92‑1 (MQ=60)
C‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGG > SRR4302533.28442/1‑94 (MQ=60)
C‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGG > SRR4302533.5902620/1‑94 (MQ=60)
C‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGG < SRR4302533.553123/94‑1 (MQ=60)
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ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCT‑C‑TTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCTGTGGCGG > NC_000913/3945258‑3945444
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
