Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,953,910 |
A→G |
N320S (AAC→AGC) |
ilvA → |
threonine deaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,953,910 | 0 | A | G | 100.0%
| 684.4
/ NA
| 215 | N320S (AAC→AGC) | ilvA | threonine deaminase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (109/106); total (109/106) |
Only 100 of 224 total aligned reads displayed.
CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG > NC_000913/3953820‑3953999
|
cgctggcgctggCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCt < 1:2209832/93‑1 (MQ=255)
gctggcgctggcGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCtt < 2:697121/93‑1 (MQ=255)
gctggcgctggcGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAAAGTGAGCtt > 1:3971239/1‑93 (MQ=255)
ggcgctggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCa < 1:4044653/93‑1 (MQ=255)
ggcgctggcgGGAATGAAAAAATATATCGCCCGGCACAACATGCGCGGCGAAGGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCa < 1:3508702/93‑1 (MQ=255)
gcgctggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCAc < 1:446772/93‑1 (MQ=255)
cgctggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACg < 2:5052580/93‑1 (MQ=255)
tggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGcc < 1:1923447/93‑1 (MQ=255)
tggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGcc < 1:5589288/93‑1 (MQ=255)
cgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgc < 2:6005464/93‑1 (MQ=255)
ggAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgcgc > 1:2645775/1‑93 (MQ=255)
ggAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgcgc < 1:3374026/93‑1 (MQ=255)
gAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCt < 1:6256605/93‑1 (MQ=255)
aaTGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTa > 1:4355863/1‑93 (MQ=255)
aaTGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTa < 2:2503893/93‑1 (MQ=255)
tGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTCCg > 1:1629351/1‑93 (MQ=255)
gAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGt > 1:926263/1‑93 (MQ=255)
aaaaaaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGtc > 1:4939435/1‑93 (MQ=255)
aaaaaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGtct < 2:1813872/93‑1 (MQ=255)
aaaaaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCCTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGtct < 1:1849595/93‑1 (MQ=255)
aaaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCAACGGCCTGCGCTACGTCTCa < 1:1003290/93‑1 (MQ=255)
aaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAg < 1:2364252/93‑1 (MQ=255)
tatatCGCCCTGCACAACATTCGCGGCGAACGGCTGTCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGaa < 1:2051504/93‑1 (MQ=255)
tatatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGaa < 2:1396337/93‑1 (MQ=255)
atatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAc < 2:1550593/93‑1 (MQ=255)
atatCGCCCTGCACAACATTCGAGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAc > 1:241663/1‑93 (MQ=255)
tatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACg > 2:2720637/1‑93 (MQ=255)
atCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGc > 1:5779470/1‑93 (MQ=255)
atCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGc < 2:357929/93‑1 (MQ=255)
atCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACAGCCTGCGCTACGTGTCCGAACGc > 1:4728976/1‑93 (MQ=255)
tCGCCCTGCACAACATTCGCGGCGAACGTCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCt < 1:6059352/93‑1 (MQ=255)
ccGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCt < 2:4079907/92‑1 (MQ=255)
cGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTg < 1:5749029/93‑1 (MQ=255)
cGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTg > 2:4393595/1‑93 (MQ=255)
cGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTg > 1:2445185/1‑93 (MQ=255)
gCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGc < 1:4915862/93‑1 (MQ=255)
ccTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGa < 2:609590/93‑1 (MQ=255)
ccTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGa > 1:2580090/1‑93 (MQ=255)
ccTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGa < 1:3264423/93‑1 (MQ=255)
cTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGaa > 2:1934937/1‑93 (MQ=255)
gCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACt > 2:4583646/1‑93 (MQ=255)
aacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGc < 2:4793072/93‑1 (MQ=255)
aacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGc > 2:3437444/1‑93 (MQ=255)
aTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGaa > 2:663658/1‑93 (MQ=255)
aTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGaa > 2:2308892/1‑93 (MQ=255)
aTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGaa > 2:2156121/1‑93 (MQ=255)
aTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGaa < 1:5261298/93‑1 (MQ=255)
ttCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAAc < 1:426720/93‑1 (MQ=255)
gcggcgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAga > 1:5083096/1‑92 (MQ=255)
gcggcgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGc < 1:5406742/93‑1 (MQ=255)
gcggcgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGc < 2:1196570/93‑1 (MQ=255)
cggcgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCg > 1:1950184/1‑93 (MQ=255)
cggcgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCg > 1:4015441/1‑93 (MQ=255)
cgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGa < 2:3942732/93‑1 (MQ=255)
gAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGaa < 1:2353260/93‑1 (MQ=255)
gAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGaa < 2:5378518/93‑1 (MQ=255)
gAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCCAACTGGGCGAACAGCGTGaa > 1:2745149/1‑93 (MQ=255)
aaCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGGGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGTGTGAAg > 2:3031358/1‑93 (MQ=255)
aaCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAg > 1:4318593/1‑93 (MQ=255)
aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGc < 1:5516185/93‑1 (MQ=255)
aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGc < 1:90777/93‑1 (MQ=255)
ggCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgt < 2:1323514/93‑1 (MQ=255)
ggCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgt < 2:2279255/93‑1 (MQ=255)
gCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgtt < 2:5677909/93‑1 (MQ=255)
gCTGGCGCATATTCTTTCCGGAGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGCACGCTGCGAACTGGGCGAACAGCGTGAAGAgtt > 2:3399435/1‑93 (MQ=255)
cTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgttg > 1:4744632/1‑93 (MQ=255)
cTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgttg < 2:5502525/93‑1 (MQ=255)
tGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgttgt < 1:3019982/93‑1 (MQ=255)
tGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgttgt > 2:711725/1‑93 (MQ=255)
gcgcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGttgttg < 2:3007001/93‑1 (MQ=255)
gcgcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGttgttg < 2:3459070/93‑1 (MQ=255)
cgcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGGCTGGGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTgg > 2:4774124/1‑93 (MQ=255)
cgcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTgg < 2:5829293/93‑1 (MQ=255)
cgcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTgg < 1:3633666/93‑1 (MQ=255)
cgcATATGCTTTCCGGTGCCAACGTGAGCGTCCACGGCCTGCGCTCCGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTgg < 1:3846781/93‑1 (MQ=255)
gcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGc < 2:5612591/93‑1 (MQ=255)
gcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGc > 2:3240993/1‑93 (MQ=255)
cATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCg > 1:2192500/1‑93 (MQ=255)
cATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCg > 1:3423222/1‑93 (MQ=255)
cATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCg > 1:3916137/1‑93 (MQ=255)
tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt < 2:4635904/93‑1 (MQ=255)
tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt > 2:808923/1‑93 (MQ=255)
tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt < 2:3827623/93‑1 (MQ=255)
tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt < 2:2798821/93‑1 (MQ=255)
atTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTg < 2:1123263/93‑1 (MQ=255)
tCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTTGGCGAACAGCGTGAAGCGTTGTTGGCGGGGAc > 1:1200923/1‑93 (MQ=255)
tCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAc > 1:1155493/1‑93 (MQ=255)
cTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGCACGCTGCGAACTGGGCGAACAGCGTGAAGGGTTGTTGGTGGGGagc > 1:1568463/1‑91 (MQ=255)
tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa < 2:2003117/93‑1 (MQ=255)
ttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCAt < 1:5997163/93‑1 (MQ=255)
ggTGCCAAGGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCg < 1:4820936/93‑1 (MQ=255)
gTGCCAACGTTAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGATCTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCgg < 2:3778900/93‑1 (MQ=255)
gTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCgg > 1:2849370/1‑93 (MQ=255)
tGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGga > 2:4292880/1‑93 (MQ=255)
cAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGgaaga > 2:3898121/1‑93 (MQ=255)
cAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGgaaga < 1:776884/93‑1 (MQ=255)
aCGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGaaa > 2:4525421/1‑93 (MQ=255)
gTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGCTGTTGGCGGTGTCCCTTCCGgaagagata > 2:1859528/1‑89 (MQ=255)
tGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAg > 2:2191990/1‑93 (MQ=255)
tGAGCTTCCACGGCCTGCGATACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAg > 2:6157021/1‑93 (MQ=255)
|
CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG > NC_000913/3953820‑3953999
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA > NC_000913/3953817‑3954002
|
GCGCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAG < SRR4302533.1279310/94‑1 (MQ=60)
CGCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGC < SRR4302533.746582/94‑1 (MQ=60)
CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT < SRR4302533.2223463/94‑1 (MQ=60)
CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT > SRR4302533.5094476/1‑94 (MQ=60)
CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAAAGTGAGCTT > SRR4302533.3995426/1‑94 (MQ=60)
CTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCC > SRR4302533.2375885/1‑94 (MQ=60)
GGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCAC < SRR4302533.2403016/94‑1 (MQ=60)
GGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCAC < SRR4302533.437142/94‑1 (MQ=60)
GGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCAC < SRR4302533.4069270/94‑1 (MQ=60)
GGCGCTGGCGGGAATGAAAAAATATATCGCCCGGCACAACATGCGCGGCGAAGGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCAC < SRR4302533.3530335/94‑1 (MQ=60)
GCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACG < SRR4302533.449446/94‑1 (MQ=60)
GGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGG < SRR4302533.818769/94‑1 (MQ=60)
CTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCC > SRR4302533.930250/1‑94 (MQ=60)
TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT < SRR4302533.4847239/94‑1 (MQ=60)
TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT < SRR4302533.5623056/94‑1 (MQ=60)
TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT < SRR4302533.1935183/94‑1 (MQ=60)
TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAAAGGCTGGCGCATATTTTTTTCCGTGCCAACGTGAGCTTCCACGGCCT > SRR4302533.2472572/1‑94 (MQ=60)
GGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTG < SRR4302533.3726605/94‑1 (MQ=60)
GGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGC > SRR4302533.2662033/1‑94 (MQ=60)
GGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCT < SRR4302533.3394862/94‑1 (MQ=60)
GGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCT < SRR4302533.5646042/94‑1 (MQ=60)
GGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCT > SRR4302533.823101/1‑94 (MQ=60)
GAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTA < SRR4302533.6294021/94‑1 (MQ=60)
GAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTA > SRR4302533.4382157/1‑94 (MQ=60)
ATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTCCG > SRR4302533.1639219/1‑94 (MQ=60)
TGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGT > SRR4302533.3537967/1‑94 (MQ=60)
TGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGT > SRR4302533.931698/1‑94 (MQ=60)
GAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTC < SRR4302533.3499231/94‑1 (MQ=60)
GAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTC > SRR4302533.4969336/1‑94 (MQ=60)
AAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCCTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTC < SRR4302533.1860877/94‑1 (MQ=60)
AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAG > SRR4302533.423240/1‑94 (MQ=60)
AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAG > SRR4302533.2798576/1‑94 (MQ=60)
AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCAACGGCCTGCGCTACGTCTCAG < SRR4302533.1009154/94‑1 (MQ=60)
AATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGA < SRR4302533.2378874/94‑1 (MQ=60)
TATATCGCCCTGCACAACATTCGCGGCGAACGGCTGTCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC < SRR4302533.2064162/94‑1 (MQ=60)
TATATCGCCCTGCACAACATTCGAGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC > SRR4302533.243160/1‑94 (MQ=60)
ATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACG < SRR4302533.1261838/94‑1 (MQ=60)
TATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGC > SRR4302533.5814375/1‑94 (MQ=60)
TATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACAGCCTGCGCTACGTGTCCGAACGC > SRR4302533.4757646/1‑94 (MQ=60)
ATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCT < SRR4302533.1973214/94‑1 (MQ=60)
TCGCCCTGCACAACATTCGCGGCGAACGTCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTG < SRR4302533.6096034/94‑1 (MQ=60)
TCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTG > SRR4302533.2460279/1‑94 (MQ=60)
CGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGC < SRR4302533.5783710/94‑1 (MQ=60)
GCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCG < SRR4302533.4945639/94‑1 (MQ=60)
GCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCG > SRR4302533.16052/1‑94 (MQ=60)
CCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGA > SRR4302533.2595967/1‑94 (MQ=60)
CCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGA > SRR4302533.3380209/1‑94 (MQ=60)
CCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGA > SRR4302533.4394318/1‑94 (MQ=60)
CCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAA < SRR4302533.3284560/94‑1 (MQ=60)
CCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAA > SRR4302533.2113158/1‑94 (MQ=60)
CCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAA > SRR4302533.439118/1‑94 (MQ=60)
CTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAAC < SRR4302533.5606109/94‑1 (MQ=60)
CACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGG < SRR4302533.6314165/94‑1 (MQ=60)
CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCCACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGC > SRR4302533.2632635/1‑94 (MQ=60)
CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGC > SRR4302533.1886065/1‑94 (MQ=60)
AACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCG > SRR4302533.2271884/1‑94 (MQ=60)
ATTCGCGGCGATCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAAC > SRR4302533.2414505/1‑94 (MQ=60)
ATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAAC < SRR4302533.5292885/94‑1 (MQ=60)
TTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACA < SRR4302533.429266/94‑1 (MQ=60)
CGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGC > SRR4302533.485850/1‑94 (MQ=60)
CGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGA > SRR4302533.5113817/1‑94 (MQ=60)
GCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCG > SRR4302533.4039891/1‑94 (MQ=60)
GCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCG < SRR4302533.5439233/94‑1 (MQ=60)
GCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCG > SRR4302533.1962070/1‑94 (MQ=60)
CGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGT < SRR4302533.2183375/94‑1 (MQ=60)
CGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGG > SRR4302533.5323382/1‑94 (MQ=60)
GGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTG > SRR4302533.1195148/1‑94 (MQ=60)
CGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAA < SRR4302533.1707661/94‑1 (MQ=60)
CGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAA < SRR4302533.4288636/94‑1 (MQ=60)
CGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCCAACTGGGCGAACAGCGTGAA > SRR4302533.2761978/1‑94 (MQ=60)
GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG < SRR4302533.2367814/94‑1 (MQ=60)
GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG < SRR4302533.4014423/94‑1 (MQ=60)
GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG > SRR4302533.4344602/1‑94 (MQ=60)
AACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGC > SRR4302533.2951140/1‑94 (MQ=60)
ACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCG < SRR4302533.5549488/94‑1 (MQ=60)
ACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCG < SRR4302533.91351/94‑1 (MQ=60)
GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG < SRR4302533.4716577/94‑1 (MQ=60)
GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG > SRR4302533.4773398/1‑94 (MQ=60)
GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG > SRR4302533.2710915/1‑94 (MQ=60)
GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG < SRR4302533.3898193/94‑1 (MQ=60)
TGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTT < SRR4302533.3038468/94‑1 (MQ=60)
TGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTT > SRR4302533.5501318/1‑94 (MQ=60)
GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG > SRR4302533.5130917/1‑94 (MQ=60)
GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG < SRR4302533.4959389/94‑1 (MQ=60)
GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG < SRR4302533.3952854/94‑1 (MQ=60)
GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG > SRR4302533.2742873/1‑94 (MQ=60)
GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG < SRR4302533.3415332/94‑1 (MQ=60)
GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG > SRR4302533.3734544/1‑94 (MQ=60)
CGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGC < SRR4302533.5450838/94‑1 (MQ=60)
CGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGC < SRR4302533.3656016/94‑1 (MQ=60)
CGCATATGCTTTCCGGTGCCAACGTGAGCGTCCACGGCCTGCGCTCCGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGC < SRR4302533.3870272/94‑1 (MQ=60)
GCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCG > SRR4302533.3940056/1‑94 (MQ=60)
GCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCG > SRR4302533.2206010/1‑94 (MQ=60)
GCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCG < SRR4302533.4050708/94‑1 (MQ=60)
GCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCG > SRR4302533.3444367/1‑94 (MQ=60)
CATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGG > SRR4302533.6033770/1‑94 (MQ=60)
CATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGG > SRR4302533.5924770/1‑94 (MQ=60)
ATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGA > SRR4302533.1950483/1‑94 (MQ=60)
TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTTGGCGAACAGCGTGAAGCGTTGTTGGCGGGGAC > SRR4302533.1208140/1‑94 (MQ=60)
TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAC > SRR4302533.5788290/1‑94 (MQ=60)
TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAC > SRR4302533.1162423/1‑94 (MQ=60)
TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAC < SRR4302533.10447/94‑1 (MQ=60)
TCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGCACGCTGCGAACTGGGCGAACAGCGTGAAGGGTTGTTGGtggggagc > SRR4302533.1577907/1‑86 (MQ=60)
CTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCA > SRR4302533.316325/1‑94 (MQ=60)
TTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATT < SRR4302533.6033485/94‑1 (MQ=60)
TCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTC < SRR4302533.4765114/94‑1 (MQ=60)
CCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCC < SRR4302533.3352041/94‑1 (MQ=60)
CCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCC > SRR4302533.5933108/1‑94 (MQ=60)
CGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCG < SRR4302533.4321993/94‑1 (MQ=60)
GGTGCCAAGGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGG < SRR4302533.4850148/94‑1 (MQ=60)
GGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGG > SRR4302533.2866903/1‑94 (MQ=60)
GTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGA > SRR4302533.1779815/1‑94 (MQ=60)
TGCCAACGTGAGCTTCCACGGCATGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAA < SRR4302533.6149118/94‑1 (MQ=60)
CCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGA < SRR4302533.4951739/94‑1 (MQ=60)
CAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAA < SRR4302533.781452/94‑1 (MQ=60)
CAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGAGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGTAAGAA > SRR4302533.2459081/1‑94 (MQ=60)
CGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAA > SRR4302533.4576765/1‑94 (MQ=60)
TGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGG < SRR4302533.2206460/94‑1 (MQ=60)
TGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGG > SRR4302533.6018757/1‑94 (MQ=60)
GAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGC < SRR4302533.5371430/94‑1 (MQ=60)
GAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGC > SRR4302533.5962957/1‑94 (MQ=60)
AGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA > SRR4302533.5261095/1‑94 (MQ=60)
AGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA > SRR4302533.2732766/1‑94 (MQ=60)
|
GCGCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA > NC_000913/3953817‑3954002
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
