Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,511,632 |
T→C |
Q84R (CAG→CGG) |
fecB ← |
FecB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,511,632 | 0 | T | C | 100.0%
| 771.7
/ NA
| 245 | Q84R (CAG→CGG) | fecB | FecB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/133); total (112/133) |
Only 100 of 270 total aligned reads displayed.
CCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG > NC_000913/4511542‑4511721
|
cccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGc > 1:1418534/1‑93 (MQ=255)
cccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGc > 2:569873/1‑93 (MQ=255)
cccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGc > 2:4786092/1‑93 (MQ=255)
ccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGcc > 1:35892/1‑93 (MQ=255)
gCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAc > 1:4884236/1‑93 (MQ=255)
gCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAc > 1:2642359/1‑93 (MQ=255)
cATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACg < 2:6297802/93‑1 (MQ=255)
cATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACg < 2:1607753/93‑1 (MQ=255)
aTGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACgg < 2:2292673/93‑1 (MQ=255)
aTGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACgg < 1:3027625/93‑1 (MQ=255)
tGGCGACTGCTGTCGGCAATGATCAGGGCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCCCGCGTTCCGACGGACCGCCACgct > 1:4344265/1‑91 (MQ=255)
gACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCa < 2:594987/93‑1 (MQ=255)
gctgctgTCGGCAATGATCAGGGCTGGTTTCAGAGCGGCAATGGCGTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAg < 1:1471410/92‑1 (MQ=255)
aCTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAg > 1:726020/1‑93 (MQ=255)
tgctgTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGGGTTCCGACGGCCCGCCACGGTTTCAggg > 1:557459/1‑92 (MQ=255)
gctgTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTg > 1:6105521/1‑93 (MQ=255)
tgTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTgcg > 2:5357753/1‑93 (MQ=255)
tCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGTTTTCAGGTGcgca < 2:6191572/93‑1 (MQ=255)
gCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGcgcacgc > 1:3152510/1‑93 (MQ=255)
cAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGcgcacgca > 2:506950/1‑93 (MQ=255)
aaTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCgcacgcac > 1:4244031/1‑93 (MQ=255)
aaTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCgcacgcac > 1:2817119/1‑93 (MQ=255)
aaTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCgcacgcac > 2:2920460/1‑93 (MQ=255)
aTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACt > 1:2885643/1‑93 (MQ=255)
taaTCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTCCGCGCGCGTTCCGCCGGACCGCCACGGTTTCAGGTGCGGACGCCCtt < 2:4266867/91‑1 (MQ=255)
gATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTc < 2:1027557/93‑1 (MQ=255)
aTCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCg > 2:1239753/1‑93 (MQ=255)
aTCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCg > 2:745505/1‑93 (MQ=255)
tCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCgg < 2:4690779/93‑1 (MQ=255)
cAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCggg > 2:2660186/1‑93 (MQ=255)
aGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGGCCGCCACGGGTTCAGGTGCGCACGCACTTAGGGc > 1:3843312/1‑93 (MQ=255)
aGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGc < 2:2375894/93‑1 (MQ=255)
aGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGc < 2:5665641/93‑1 (MQ=255)
ggTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCa < 2:3587201/93‑1 (MQ=255)
gTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAg > 2:490350/1‑93 (MQ=255)
tCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAgg < 1:244109/93‑1 (MQ=255)
ctcgTTGCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGa < 1:476740/90‑1 (MQ=255)
cTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGa > 1:1886902/1‑93 (MQ=255)
tGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAt < 1:4596585/93‑1 (MQ=255)
tGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAt > 2:4349486/1‑93 (MQ=255)
gTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGc < 1:5771059/93‑1 (MQ=255)
tttCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCg < 1:4113739/93‑1 (MQ=255)
ttCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGt > 1:3430206/1‑93 (MQ=255)
ttCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACCTCGGGCAGGATGCGt < 1:6044958/93‑1 (MQ=255)
tCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtt > 2:2874390/1‑93 (MQ=255)
cAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGttt < 1:2917508/93‑1 (MQ=255)
agagCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtttt > 1:5527121/1‑93 (MQ=255)
agagCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtttt > 1:3672129/1‑93 (MQ=255)
agagCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtttt < 2:1264515/93‑1 (MQ=255)
agagCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtttt > 2:2500932/1‑93 (MQ=255)
gagCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTg > 2:2514898/1‑93 (MQ=255)
ggCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATc < 1:1002496/93‑1 (MQ=255)
gCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCTCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTGTTGCATCg < 2:6131581/93‑1 (MQ=255)
gCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCg > 2:1177529/1‑93 (MQ=255)
gCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCg > 2:2066712/1‑93 (MQ=255)
cAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGt > 1:5648482/1‑93 (MQ=255)
cAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGt > 1:3976764/1‑93 (MQ=255)
aaTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGtt > 1:5345439/1‑93 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTa < 2:5316159/93‑1 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTa < 2:1814758/93‑1 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTCGCATCGTTa > 2:5049483/1‑93 (MQ=255)
gCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcg > 1:1039242/1‑93 (MQ=255)
ttCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtc < 2:1403374/93‑1 (MQ=255)
tCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtcg > 1:1242619/1‑93 (MQ=255)
tCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtcg > 2:4231611/1‑93 (MQ=255)
tCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtcg > 1:550623/1‑93 (MQ=255)
tCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtcg > 1:4223841/1‑93 (MQ=255)
ccAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCgg < 2:192731/93‑1 (MQ=255)
aGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCa > 2:2306762/1‑93 (MQ=255)
aGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCa < 1:655097/93‑1 (MQ=255)
ggCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCaa > 2:5142179/1‑93 (MQ=255)
ggCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCaa < 1:3218938/93‑1 (MQ=255)
ggCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCaa > 1:5792634/1‑93 (MQ=255)
ggCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCaa < 2:1497687/93‑1 (MQ=255)
cTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATa < 1:4235841/93‑1 (MQ=255)
cTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGAACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATa < 2:5543967/93‑1 (MQ=255)
tCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATAc < 1:6268494/93‑1 (MQ=255)
cGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATAcc > 2:3036823/1‑93 (MQ=255)
cTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGAt < 2:1780741/93‑1 (MQ=255)
cgcgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCgg < 1:156160/93‑1 (MQ=255)
cgcgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCgg > 1:1541524/1‑93 (MQ=255)
cgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGa < 1:1800048/93‑1 (MQ=255)
gcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGAt < 2:5448171/93‑1 (MQ=255)
gcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGa > 2:3409045/1‑93 (MQ=255)
gcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGa > 2:3264600/1‑93 (MQ=255)
gcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGa < 1:4173228/93‑1 (MQ=255)
cgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGAc < 2:4143430/93‑1 (MQ=255)
ttCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGt > 1:2194878/1‑93 (MQ=255)
ttCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGt > 2:2702654/1‑93 (MQ=255)
tCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTc < 1:1069945/93‑1 (MQ=255)
ccGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTcc < 1:4031965/93‑1 (MQ=255)
ccGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTcc < 2:1973945/93‑1 (MQ=255)
cGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCa > 1:6214879/1‑93 (MQ=255)
cGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCa > 2:4057419/1‑93 (MQ=255)
gACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAc < 2:1070155/93‑1 (MQ=255)
aCGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcg < 2:374940/93‑1 (MQ=255)
cGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcgg < 1:2772357/93‑1 (MQ=255)
ggACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcggc < 1:2753284/93‑1 (MQ=255)
gACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcggcg > 1:2327487/1‑93 (MQ=255)
gACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGACGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcggcg > 2:3954871/1‑93 (MQ=255)
|
CCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG > NC_000913/4511542‑4511721
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGGCCA > NC_000913/4511539‑4511725
|
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACC < SRR4302533.4790864/94‑1 (MQ=60)
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACC > SRR4302533.1117396/1‑94 (MQ=60)
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGGTCCGACGGACC > SRR4302533.251524/1‑94 (MQ=60)
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGGCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACC < SRR4302533.6037285/94‑1 (MQ=60)
CCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCG < SRR4302533.3811764/94‑1 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302533.4105031/1‑94 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302533.3980742/1‑94 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302533.1427115/1‑94 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302533.654349/1‑94 (MQ=60)
CCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCC > SRR4302533.36131/1‑94 (MQ=60)
CCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCC < SRR4302533.6204591/94‑1 (MQ=60)
CGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAC > SRR4302533.4913829/1‑94 (MQ=60)
CGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAC > SRR4302533.2658594/1‑94 (MQ=60)
CATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGG > SRR4302533.2044855/1‑94 (MQ=60)
ATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGT < SRR4302533.3046154/94‑1 (MQ=60)
ATGGCGACTGCTGTCGGCAATGATCAGGGCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCCCGCGTTCCGACGGACCGCCACGCT > SRR4302533.4370446/1‑94 (MQ=60)
CGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCA > SRR4302533.5530258/1‑94 (MQ=60)
GACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAG > SRR4302533.730310/1‑94 (MQ=60)
GCTGCTGTCGGCAATGATCAGGGCTGGTTTCAGAGCGGCAATGGCGTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGG < SRR4302533.1480304/94‑1 (MQ=60)
ACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGG < SRR4302533.2977209/94‑1 (MQ=60)
CTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGGGTTCCGACGGCCCGCCACGGTTTCAGGG > SRR4302533.560768/1‑94 (MQ=60)
TGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTG > SRR4302533.6142390/1‑94 (MQ=60)
TGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTG < SRR4302533.1504252/94‑1 (MQ=60)
TGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGCTCCGACGGACCGCCACGGTTTCAGGTGCGC > SRR4302533.1205357/1‑94 (MQ=60)
GTCGGCAATGATCAGGTCTGGTTGCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCA < SRR4302533.1562602/94‑1 (MQ=60)
TCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCAC < SRR4302533.2042563/94‑1 (MQ=60)
CGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACG > SRR4302533.3849517/1‑94 (MQ=60)
CGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACG < SRR4302533.3583338/94‑1 (MQ=60)
GGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGC > SRR4302533.3171890/1‑94 (MQ=60)
CAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCAC > SRR4302533.4269660/1‑94 (MQ=60)
CAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCAC > SRR4302533.2834460/1‑94 (MQ=60)
CAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCAC < SRR4302533.4031048/94‑1 (MQ=60)
AATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACT < SRR4302533.3947910/94‑1 (MQ=60)
AATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACT > SRR4302533.2903387/1‑94 (MQ=60)
AATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACT < SRR4302533.950366/94‑1 (MQ=60)
ATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTT > SRR4302533.2465160/1‑94 (MQ=60)
TGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTC > SRR4302533.1234498/1‑94 (MQ=60)
ATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGG > SRR4302533.6141994/1‑94 (MQ=60)
ATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGG < SRR4302533.5942649/94‑1 (MQ=60)
TCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGG < SRR4302533.718040/94‑1 (MQ=60)
CAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGGCCGCCACGGGTTCAGGTGCGCACGCACTTAGGGC > SRR4302533.3866789/1‑94 (MQ=60)
CAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGC < SRR4302533.2269546/94‑1 (MQ=60)
AGGTCTGGTTTCAGAGCGGCAATGGGTTCCAGGCTCGGCTGCCCGCGCGTTCCGAAGGGCCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCA > SRR4302533.1857397/1‑94 (MQ=60)
AGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCA > SRR4302533.6303518/1‑94 (MQ=60)
GTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGG > SRR4302533.4116393/1‑94 (MQ=60)
TCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGA < SRR4302533.245622/94‑1 (MQ=60)
TCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGA > SRR4302533.1898426/1‑94 (MQ=60)
CTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAT < SRR4302533.1257799/94‑1 (MQ=60)
CTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAT < SRR4302533.4150734/94‑1 (MQ=60)
CTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAT > SRR4302533.3133837/1‑94 (MQ=60)
CTCGTTGCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAT < SRR4302533.479586/94‑1 (MQ=60)
TGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATG < SRR4302533.4624431/94‑1 (MQ=60)
TGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATG > SRR4302533.3238754/1‑94 (MQ=60)
TGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATG < SRR4302533.760736/94‑1 (MQ=60)
GTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCG < SRR4302533.5805906/94‑1 (MQ=60)
GTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCG < SRR4302533.1048297/94‑1 (MQ=60)
TTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGT > SRR4302533.2934923/1‑94 (MQ=60)
TTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGT < SRR4302533.4138739/94‑1 (MQ=60)
TTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGT > SRR4302533.3451397/1‑94 (MQ=60)
TTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTT < SRR4302533.1537625/94‑1 (MQ=60)
TTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTT < SRR4302533.1073823/94‑1 (MQ=60)
TTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTT < SRR4302533.3302012/94‑1 (MQ=60)
TTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACCTCGGGCAGGATGCGTT < SRR4302533.6081577/94‑1 (MQ=60)
TCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCANGCACTTCGGGCAGGATGCGNTT > SRR4302533.4879207/1‑94 (MQ=60)
CAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCTCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTT < SRR4302533.3782003/94‑1 (MQ=60)
CAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTT < SRR4302533.2935392/94‑1 (MQ=60)
CAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTT > SRR4302533.5560489/1‑94 (MQ=60)
CAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTT > SRR4302533.3694697/1‑94 (MQ=60)
AGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTG > SRR4302533.3553663/1‑94 (MQ=60)
GCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCAT < SRR4302533.2445177/94‑1 (MQ=60)
CGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATC < SRR4302533.1887804/94‑1 (MQ=60)
GGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCG < SRR4302533.1008349/94‑1 (MQ=60)
GGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCG > SRR4302533.3070469/1‑94 (MQ=60)
GCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGT > SRR4302533.5682630/1‑94 (MQ=60)
GCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGT < SRR4302533.6174438/94‑1 (MQ=60)
GCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGT < SRR4302533.48811/94‑1 (MQ=60)
GCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGT > SRR4302533.4000976/1‑94 (MQ=60)
CAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTT < SRR4302533.2977784/94‑1 (MQ=60)
CAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTT > SRR4302533.5377498/1‑94 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA < SRR4302533.651934/94‑1 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA < SRR4302533.1725463/94‑1 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA > SRR4302533.2810650/1‑94 (MQ=60)
TGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATC < SRR4302533.4261582/94‑1 (MQ=60)
GGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCG > SRR4302533.1045351/1‑94 (MQ=60)
GGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTAAGGGGGGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCG > SRR4302533.2821640/1‑94 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCTCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG < SRR4302533.6097401/94‑1 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG > SRR4302533.4249377/1‑94 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG > SRR4302533.1475518/1‑94 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG > SRR4302533.1659850/1‑94 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG > SRR4302533.1250040/1‑94 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG > SRR4302533.553888/1‑94 (MQ=60)
TCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGG > SRR4302533.2449214/1‑94 (MQ=60)
CCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGC < SRR4302533.4705063/94‑1 (MQ=60)
CCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGC < SRR4302533.2855034/94‑1 (MQ=60)
CAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCA > SRR4302533.4297679/1‑94 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA < SRR4302533.3688269/94‑1 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA > SRR4302533.5827628/1‑94 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA < SRR4302533.2775862/94‑1 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA > SRR4302533.2777297/1‑94 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA < SRR4302533.658964/94‑1 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACACACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA > SRR4302533.4518897/1‑94 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGCTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA > SRR4302533.1943925/1‑94 (MQ=60)
GGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCANGATGCGTTTTNCATCGNTNTCNTNGNANAT > SRR4302533.282005/1‑94 (MQ=60)
GGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAAT < SRR4302533.3238787/94‑1 (MQ=60)
GCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATA > SRR4302533.1469207/1‑94 (MQ=60)
CTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATAC > SRR4302533.5771653/1‑94 (MQ=60)
CTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATAC < SRR4302533.4261430/94‑1 (MQ=60)
CTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATAC < SRR4302533.727526/94‑1 (MQ=60)
TCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACC < SRR4302533.6305951/94‑1 (MQ=60)
TCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACC < SRR4302533.5809027/94‑1 (MQ=60)
TCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACC < SRR4302533.5548393/94‑1 (MQ=60)
TCGGCTGCGCGCCCGTTCCGCCGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACC < SRR4302533.5548392/94‑1 (MQ=60)
CGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCG < SRR4302533.5736567/94‑1 (MQ=60)
CGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCG < SRR4302533.4335488/94‑1 (MQ=60)
GGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGA < SRR4302533.4206514/94‑1 (MQ=60)
GGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGA > SRR4302533.265359/1‑94 (MQ=60)
TGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCG < SRR4302533.3355561/94‑1 (MQ=60)
GCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGG < SRR4302533.41560/94‑1 (MQ=60)
GCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGG > SRR4302533.1550811/1‑94 (MQ=60)
CGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGG < SRR4302533.157156/94‑1 (MQ=60)
GCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGA < SRR4302533.5595171/94‑1 (MQ=60)
GCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGA < SRR4302533.2739628/94‑1 (MQ=60)
CGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGAT < SRR4302533.1811000/94‑1 (MQ=60)
GCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATG < SRR4302533.1023205/94‑1 (MQ=60)
GCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATG < SRR4302533.4265026/94‑1 (MQ=60)
GCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGAC < SRR4302533.4198517/94‑1 (MQ=60)
GTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGT > SRR4302533.2932084/1‑94 (MQ=60)
GTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGT > SRR4302533.4722980/1‑94 (MQ=60)
GTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGT > SRR4302533.2208402/1‑94 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC < SRR4302533.5653367/94‑1 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC < SRR4302533.1076249/94‑1 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC > SRR4302533.5201606/1‑94 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC > SRR4302533.4254348/1‑94 (MQ=60)
CCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCA < SRR4302533.4056510/94‑1 (MQ=60)
CCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCA > SRR4302533.4225350/1‑94 (MQ=60)
CCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCA > SRR4302533.6252145/1‑94 (MQ=60)
CGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGC < SRR4302533.5503033/94‑1 (MQ=60)
CGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGC < SRR4302533.2789368/94‑1 (MQ=60)
GGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG < SRR4302533.5809889/94‑1 (MQ=60)
GGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG < SRR4302533.2770167/94‑1 (MQ=60)
GGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG > SRR4302533.2341895/1‑94 (MQ=60)
GGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG < SRR4302533.5591279/94‑1 (MQ=60)
GACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGG > SRR4302533.6029378/1‑94 (MQ=60)
CGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGGCCA > SRR4302533.4586645/1‑94 (MQ=60)
CGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGGCCA > SRR4302533.279573/1‑94 (MQ=60)
CGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGGCCA > SRR4302533.3716569/1‑94 (MQ=60)
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ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGGCCA > NC_000913/4511539‑4511725
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
