Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,518,280	T→C	S437G (AGT→GGT)	yjhF ←	putative transport system permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,518,280	0	T	C	98.7%	1244.0 / 1.6	394	S437G (AGT→GGT)	yjhF	putative transport system permease
Reads supporting (aligned to +/- strand): ref base T (4/1); new base C (179/210); total (183/211)
Fisher's exact test for biased strand distribution p-value = 1.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01

Only 100 of 405 total aligned reads displayed.

AATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGG  >  NC_000913/4518190‑4518369

aaTTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGa                                                                                         <  2:3033478/93‑1 (MQ=255)

   tATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATgg                                                                                      <  1:6233169/93‑1 (MQ=255)

     tGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGAt                                                                                    >  2:8520204/1‑93 (MQ=255)

      gggggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATa                                                                                   >  1:442301/1‑93 (MQ=255)

      gggggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATa                                                                                   <  1:8939150/93‑1 (MQ=255)

        gggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAag                                                                                 <  1:7931016/93‑1 (MQ=255)

        gggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAag                                                                                 >  1:1325995/1‑93 (MQ=255)

         ggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACAAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAaga                                                                                <  1:973726/93‑1 (MQ=255)

            cAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAgtg                                                                             <  2:4215752/93‑1 (MQ=255)

             aGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAgtgt                                                                            >  1:7645232/1‑93 (MQ=255)

             aGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAgtgt                                                                            >  2:9571879/1‑93 (MQ=255)

              gTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGtgtg                                                                           >  1:5678316/1‑93 (MQ=255)

              gTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGtgtg                                                                           <  2:4769960/93‑1 (MQ=255)

              gTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGtgtg                                                                           >  2:5039167/1‑93 (MQ=255)

              gTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGtgtg                                                                           <  1:1893741/93‑1 (MQ=255)

               tGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTgg                                                                          >  1:8061583/1‑93 (MQ=255)

                gAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGa                                                                         >  2:6614419/1‑93 (MQ=255)

                gAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGa                                                                         <  2:9050811/93‑1 (MQ=255)

                 aacaacAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGAc                                                                        >  1:3915042/1‑93 (MQ=255)

                   caacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACAt                                                                      >  2:3381724/1‑93 (MQ=255)

                   caacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACAt                                                                      >  1:2564634/1‑93 (MQ=255)

                    aacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATc                                                                     <  2:9748290/93‑1 (MQ=255)

                    aacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATc                                                                     >  2:3745620/1‑93 (MQ=255)

                    aacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATc                                                                     <  1:5117963/93‑1 (MQ=255)

                      caGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATcgg                                                                   <  2:8720616/93‑3 (MQ=255)

                       aGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGc                                                                  >  2:1016628/1‑93 (MQ=255)

                         gTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGt                                                                <  2:883752/93‑1 (MQ=255)

                           tGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTcc                                                              <  2:6529248/93‑1 (MQ=255)

                           tGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTcc                                                              <  1:3064723/93‑1 (MQ=255)

                               tCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGa                                                          <  1:3710859/93‑1 (MQ=255)

                               tCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGa                                                          <  2:1402275/93‑1 (MQ=255)

                                cACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGAt                                                         <  2:1206220/93‑1 (MQ=255)

                                 aCTGGCAAGAACCCGATTATAAACCTAAGCTGGCGAGCAGAATAAAAATCAGCCCGCCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATa                                                        <  2:5910072/93‑1 (MQ=255)

                                  cTGTCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGACGGATAAGAGTGTGGACATCAGCGTCCAGGATaa                                                       <  1:9757587/93‑1 (MQ=255)

                                  cTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATaa                                                       >  1:8523272/1‑93 (MQ=255)

                                   tGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAc                                                      >  2:8150519/1‑93 (MQ=255)

                                   tGGAAAGACCCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCGCCGATGGATAAGAGTGAGGACATCAGCGTCCAGGATAAc                                                      <  1:9158187/93‑1 (MQ=255)

                                    ggCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACa                                                     >  1:9558223/1‑93 (MQ=255)

                                     gCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGGGTGGACATCAGCGTCCAGGATAACAg                                                    >  2:5498450/1‑93 (MQ=255)

                                       aaGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAACAGTGTGGACATCAGCGACCAGGATAACAGCg                                                  >  1:3175435/1‑93 (MQ=255)

                                        aGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATGAGAGTGTGGACATCAGCGTCAAGGATAACAGCGt                                                 >  2:8404020/1‑93 (MQ=255)

                                        aGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGt                                                 >  2:9361437/1‑93 (MQ=255)

                                         gAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGtt                                                >  2:2808775/1‑93 (MQ=255)

                                         gAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGtt                                                <  1:7159057/93‑1 (MQ=255)

                                          aaCCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGttt                                               <  2:7975464/93‑1 (MQ=255)

                                          aaCCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGttt                                               <  1:772970/93‑1 (MQ=255)

                                              cGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGGTAACAGCGTTTCttt                                           <  2:7014338/93‑1 (MQ=255)

                                              cGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCttt                                           <  1:6322499/93‑1 (MQ=255)

                                              cGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCttt                                           >  1:9916821/1‑93 (MQ=255)

                                              cGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCttt                                           <  2:4406847/93‑1 (MQ=255)

                                                aTTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtgg                                         >  1:4575617/1‑93 (MQ=255)

                                                  tataAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtggtg                                       <  2:9175372/93‑1 (MQ=255)

                                                   ataAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtggtgg                                      >  1:3496916/1‑93 (MQ=255)

                                                     aaaaCTAAGCTGGCGAGGAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTc                                    <  1:1678174/93‑1 (MQ=255)

                                                     aaaaCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTc                                    >  2:5154198/1‑93 (MQ=255)

                                                       aaCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAg                                  >  2:7267782/1‑93 (MQ=255)

                                                        aCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAgg                                 >  1:4647109/1‑93 (MQ=255)

                                                        aCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAgg                                 <  2:1537284/93‑1 (MQ=255)

                                                        aCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAgg                                 >  1:9466305/1‑93 (MQ=255)

                                                         cTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGc                                >  1:8685166/1‑93 (MQ=255)

                                                         cTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGc                                >  1:2669997/1‑93 (MQ=255)

                                                          tAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGcc                               <  2:3970870/93‑1 (MQ=255)

                                                            aGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaa                             >  1:4837768/1‑93 (MQ=255)

                                                             gCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaa                            >  1:5994574/1‑93 (MQ=255)

                                                              cTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaaa                           >  1:4289880/1‑93 (MQ=255)

                                                               tGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaaaa                          >  2:1779265/1‑93 (MQ=255)

                                                                  cGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGt                       <  2:6735852/93‑1 (MQ=255)

                                                                  cGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGt                       <  1:2894512/93‑1 (MQ=255)

                                                                    aGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCt                     <  1:2184280/93‑1 (MQ=255)

                                                                      cAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCttt                   <  1:8415255/93‑1 (MQ=255)

                                                                       aGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTa                  <  1:7029833/93‑1 (MQ=255)

                                                                       aGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTa                  >  2:709058/1‑93 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 >  1:5595987/1‑93 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 <  2:5658652/93‑1 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 >  1:8213283/1‑93 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 >  2:3277622/1‑93 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 <  2:3208182/93‑1 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 >  1:6855593/1‑93 (MQ=255)

                                                                        gAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTaa                 >  1:4250027/1‑93 (MQ=255)

                                                                         aaTAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAat                >  2:1330255/1‑93 (MQ=255)

                                                                         aaTAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAat                >  1:4947231/1‑93 (MQ=255)

                                                                          aTAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatc               >  2:5358429/1‑93 (MQ=255)

                                                                           tAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatca              <  1:1212646/93‑1 (MQ=255)

                                                                           tAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatca              >  1:6669542/1‑93 (MQ=255)

                                                                           tAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatca              >  2:2011018/1‑93 (MQ=255)

                                                                           tAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatca              >  1:9837834/1‑93 (MQ=255)

                                                                           tAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatca              <  1:9281558/93‑1 (MQ=255)

                                                                           tAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatca              <  1:1584403/93‑1 (MQ=255)

                                                                            aaaaaTCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatcat             <  1:1159488/93‑1 (MQ=255)

                                                                             aaaaTCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatcatc            <  1:10000007/93‑1 (MQ=255)

                                                                             aaaaTCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatcatc            <  2:774978/93‑1 (MQ=255)

                                                                               aaTCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCa          <  1:7277164/93‑1 (MQ=255)

                                                                                aTCAGCCCACCGATGGATAAGAGTGTTGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGTTCAGGCCAAAAAAGTCTTTAATCATCCAg         >  1:5365942/1‑93 (MQ=255)

                                                                                   aGCCCACCGATGGATAAGAGTGTGGACCTCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGaaa      >  2:35675/1‑93 (MQ=255)

                                                                                   aGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGaaa      <  2:8268806/93‑1 (MQ=255)

                                                                                   aGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGaaa      <  2:6084106/93‑1 (MQ=255)

                                                                                    gCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAc     <  2:9679009/93‑1 (MQ=255)

                                                                                     cccACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACt    <  1:654983/93‑1 (MQ=255)

                                                                                      ccACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTg   <  2:7516876/93‑1 (MQ=255)

                                                                                       cACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTgg  >  1:2421583/1‑93 (MQ=255)

AATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGG  >  NC_000913/4518190‑4518369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 233 total aligned reads displayed.

CTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCATC  >  NC_000913/4518187‑4518373

CTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACC                                                                                               >  SRR4302540.1992261/1‑94 (MQ=60)

CTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACC                                                                                               >  SRR4302540.6835466/1‑94 (MQ=60)

 TAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCG                                                                                              <  SRR4302540.2414334/94‑1 (MQ=60)

  AAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGA                                                                                             >  SRR4302540.10023225/1‑94 (MQ=60)

   AATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGAT                                                                                            <  SRR4302540.4911967/94‑1 (MQ=60)

   AATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGAT                                                                                            >  SRR4302540.9244917/1‑94 (MQ=60)

    ATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATG                                                                                           <  SRR4302540.3932588/94‑1 (MQ=60)

    ATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATG                                                                                           <  SRR4302540.4297209/94‑1 (MQ=60)

     TTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGG                                                                                          <  SRR4302540.9299165/94‑1 (MQ=60)

     TTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGG                                                                                          <  SRR4302540.5075281/94‑1 (MQ=60)

      TATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGA                                                                                         <  SRR4302540.6302490/94‑1 (MQ=60)

        TGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATA                                                                                       >  SRR4302540.447010/1‑94 (MQ=60)

         GGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAA                                                                                      <  SRR4302540.9043970/94‑1 (MQ=60)

         GGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAA                                                                                      <  SRR4302540.9927072/94‑1 (MQ=60)

          GGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATCAG                                                                                     >  SRR4302540.1339827/1‑94 (MQ=60)

          GGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAG                                                                                     >  SRR4302540.1339828/1‑94 (MQ=60)

          GGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAG                                                                                     >  SRR4302540.1687673/1‑94 (MQ=60)

          GGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAG                                                                                     >  SRR4302540.4326429/1‑94 (MQ=60)

            GGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAG                                                                                   >  SRR4302540.589713/1‑94 (MQ=60)

            GGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACAAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAG                                                                                   <  SRR4302540.983730/94‑1 (MQ=60)

             GACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGT                                                                                  <  SRR4302540.1874055/94‑1 (MQ=60)

             GACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGT                                                                                  >  SRR4302540.8560975/1‑94 (MQ=60)

              GCAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTG                                                                                 >  SRR4302540.4295544/1‑94 (MQ=60)

              ACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTG                                                                                 <  SRR4302540.3036979/94‑1 (MQ=60)

              ACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTG                                                                                 <  SRR4302540.3677189/94‑1 (MQ=60)

               CAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGcgggg                                                                                >  SRR4302540.7324978/1‑89 (MQ=60)

               CAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGT                                                                                <  SRR4302540.4468327/94‑1 (MQ=60)

               CAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGT                                                                                >  SRR4302540.7731284/1‑94 (MQ=60)

               CAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGT                                                                                <  SRR4302540.8117876/94‑1 (MQ=60)

                AGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTG                                                                               >  SRR4302540.4942038/1‑94 (MQ=60)

                AGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTG                                                                               >  SRR4302540.5740839/1‑94 (MQ=60)

                 GTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGG                                                                              <  SRR4302540.164812/94‑1 (MQ=60)

                 GTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGG                                                                              >  SRR4302540.8155160/1‑94 (MQ=60)

                 GTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGG                                                                              <  SRR4302540.1914466/94‑1 (MQ=60)

                  TGAACAACAGGTTAGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGA                                                                             <  SRR4302540.9038506/94‑1 (MQ=60)

                   GAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGAC                                                                            <  SRR4302540.319760/94‑1 (MQ=60)

                   GAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGAC                                                                            >  SRR4302540.3957444/1‑94 (MQ=60)

                   GAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGAC                                                                            >  SRR4302540.2647553/1‑94 (MQ=60)

                    AACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACA                                                                           >  SRR4302540.4982451/1‑94 (MQ=60)

                    AACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACA                                                                           >  SRR4302540.3767268/1‑94 (MQ=60)

                     ACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACAT                                                                          >  SRR4302540.2592282/1‑94 (MQ=60)

                      CAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATC                                                                         <  SRR4302540.6484045/94‑1 (MQ=60)

                      CAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATC                                                                         >  SRR4302540.933673/1‑94 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        <  SRR4302540.5173370/94‑1 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        <  SRR4302540.7877031/94‑1 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        <  SRR4302540.7847976/94‑1 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        <  SRR4302540.2390509/94‑1 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        >  SRR4302540.6439904/1‑94 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        >  SRR4302540.1652306/1‑94 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCA                                                                        >  SRR4302540.5874047/1‑94 (MQ=60)

                       AACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGACCACCGATGGATAAGAGTGAGGACATCA                                                                        >  SRR4302540.7218023/1‑94 (MQ=60)

                        ACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAG                                                                       <  SRR4302540.7606108/94‑1 (MQ=60)

                        ACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAG                                                                       <  SRR4302540.2147701/94‑1 (MQ=60)

                        ACAGGTTGGATCACGGTCAAGAACACGATTATAAAACTAAGCTGGCTATCAGAATAAGAGTCAGCCCACCGATGGATAAGAGTGTGGACATCAG                                                                       <  SRR4302540.620337/94‑1 (MQ=53)

                         CAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGC                                                                      <  SRR4302540.9906714/94‑1 (MQ=60)

                           GGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGT                                                                    <  SRR4302540.136830/94‑1 (MQ=60)

                            GTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTC                                                                   >  SRR4302540.4472067/1‑94 (MQ=60)

                            GTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTC                                                                   >  SRR4302540.4713950/1‑94 (MQ=60)

                             TTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCC                                                                  <  SRR4302540.2305803/94‑1 (MQ=60)

                             TTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCC                                                                  <  SRR4302540.700018/94‑1 (MQ=60)

                              TGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCA                                                                 <  SRR4302540.3098348/94‑1 (MQ=60)

                              TGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCA                                                                 <  SRR4302540.808934/94‑1 (MQ=60)

                              TGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCA                                                                 <  SRR4302540.28688/94‑1 (MQ=60)

                               GGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAG                                                                >  SRR4302540.4603860/1‑94 (MQ=60)

                               GGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAG                                                                <  SRR4302540.1336062/94‑1 (MQ=60)

                                GCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGG                                                               >  SRR4302540.8202697/1‑94 (MQ=60)

                                GCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGG                                                               >  SRR4302540.10132131/1‑94 (MQ=60)

                                 CTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGA                                                              >  SRR4302540.4640541/1‑94 (MQ=60)

                                 CTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGGGTGGACATCAGCGTCCAGGA                                                              >  SRR4302540.8807423/1‑94 (MQ=60)

                                  TCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGAT                                                             <  SRR4302540.25912/94‑1 (MQ=60)

                                  TCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGAT                                                             <  SRR4302540.3080396/94‑1 (MQ=60)

                                    ACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAA                                                           >  SRR4302540.8622315/1‑94 (MQ=60)

                                    ACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGAGTGGACATCAGCGTCCAGGATAA                                                           >  SRR4302540.9623262/1‑94 (MQ=60)

                                     CTGTCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGACGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          <  SRR4302540.9872054/94‑1 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGATTAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          >  SRR4302540.9427966/1‑94 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          <  SRR4302540.9859321/94‑1 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          <  SRR4302540.7101961/94‑1 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          <  SRR4302540.9871862/94‑1 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          >  SRR4302540.2207063/1‑94 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          <  SRR4302540.880995/94‑1 (MQ=60)

                                     CTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAAC                                                          >  SRR4302540.8587273/1‑94 (MQ=60)

                                      TGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATTAGCCCACCGATGGGTAAGAGTGTGGACATCAGCGGCCAGGATAACA                                                         >  SRR4302540.100354/1‑94 (MQ=60)

                                      TGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACA                                                         >  SRR4302540.9671240/1‑94 (MQ=60)

                                      TGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACA                                                         <  SRR4302540.5346677/94‑1 (MQ=60)

                                      TGGAAAGACCCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCGCCGATGGATAAGAGTGAGGACATCAGCGTCCAGGATAACA                                                         <  SRR4302540.9268119/94‑1 (MQ=60)

                                       GGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAG                                                        <  SRR4302540.5692608/94‑1 (MQ=60)

                                       GGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAG                                                        <  SRR4302540.135027/94‑1 (MQ=60)

                                        GCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGC                                                       <  SRR4302540.4321219/94‑1 (MQ=60)

                                        GCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGC                                                       <  SRR4302540.7319121/94‑1 (MQ=60)

                                         CAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAACAGTGTGGACATCAGCGACCAGGATAACAGCG                                                      >  SRR4302540.3209954/1‑94 (MQ=60)

                                          AAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGT                                                     <  SRR4302540.5737650/94‑1 (MQ=60)

                                          AAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGT                                                     >  SRR4302540.7619761/1‑94 (MQ=60)

                                          AAGAACCCGATTATAAAACTAAGCTAGCGAGCAGAATAAAAATCAGTCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGT                                                     >  SRR4302540.7619762/1‑94 (MQ=60)

                                           AGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTT                                                    >  SRR4302540.5577121/1‑94 (MQ=60)

                                           AGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACAACAGCGTCCAGGATAACAGCGTT                                                    >  SRR4302540.9788153/1‑94 (MQ=60)

                                            GAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTT                                                   <  SRR4302540.7238851/94‑1 (MQ=60)

                                            GAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTT                                                   >  SRR4302540.8668778/1‑94 (MQ=60)

                                             AACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTC                                                  <  SRR4302540.781189/94‑1 (MQ=60)

                                              CCCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCT                                                 <  SRR4302540.7196744/94‑1 (MQ=60)

                                              ACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCT                                                 <  SRR4302540.5189384/94‑1 (MQ=60)

                                              ACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCT                                                 <  SRR4302540.1208371/94‑1 (MQ=60)

                                              ACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCT                                                 <  SRR4302540.7749902/94‑1 (MQ=60)

                                              ACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCT                                                 <  SRR4302540.2555020/94‑1 (MQ=60)

                                               CCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTT                                                >  SRR4302540.4811462/1‑94 (MQ=60)

                                                CCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGagtttattg                                               >  SRR4302540.9469388/1‑85 (MQ=60)

                                                CCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTT                                               >  SRR4302540.10032637/1‑94 (MQ=60)

                                                CCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTT                                               <  SRR4302540.9447655/94‑1 (MQ=60)

                                                 CGATTATAAAACTAAGCTGGCTAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTG                                              <  SRR4302540.7050595/94‑1 (MQ=60)

                                                 CGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTG                                              <  SRR4302540.6392906/94‑1 (MQ=60)

                                                  GATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGG                                             >  SRR4302540.4624974/1‑94 (MQ=60)

                                                  CATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGG                                             <  SRR4302540.2363893/94‑1 (MQ=60)

                                                   ATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGT                                            <  SRR4302540.8159294/94‑1 (MQ=60)

                                                   ATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGT                                            <  SRR4302540.10000960/94‑1 (MQ=60)

                                                    TTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTTTTTGGTG                                           >  SRR4302540.3132684/1‑94 (MQ=60)

                                                     TATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGG                                          >  SRR4302540.3263494/1‑94 (MQ=60)

                                                     TATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGG                                          >  SRR4302540.3535001/1‑94 (MQ=60)

                                                      ATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGT                                         <  SRR4302540.8603673/94‑1 (MQ=60)

                                                       TAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTC                                        <  SRR4302540.104768/94‑1 (MQ=60)

                                                       TAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTC                                        >  SRR4302540.9681493/1‑94 (MQ=60)

                                                       TAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTC                                        <  SRR4302540.3974469/94‑1 (MQ=60)

                                                       TAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTC                                        >  SRR4302540.4643723/1‑94 (MQ=60)

                                                       AAAAACAAAGGTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTC                                        <  SRR4302540.8140234/94‑1 (MQ=60)

                                                        AAAACTAAGCTGGCGAGGAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCA                                       <  SRR4302540.1696396/94‑1 (MQ=60)

                                                         AAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAG                                      <  SRR4302540.9583580/94‑1 (MQ=60)

                                                         AAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAG                                      <  SRR4302540.260342/94‑1 (MQ=60)

                                                         AAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAG                                      <  SRR4302540.5858062/94‑1 (MQ=60)

                                                         AAACTAAGCGGGCGAGCAGAAAAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAG                                      <  SRR4302540.6206719/94‑1 (MQ=60)

                                                          ACCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGG                                     <  SRR4302540.9879142/94‑1 (MQ=60)

                                                          AACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGG                                     >  SRR4302540.4696852/1‑94 (MQ=60)

                                                          AACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGG                                     >  SRR4302540.9578603/1‑94 (MQ=60)

                                                           ACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGC                                    >  SRR4302540.8786016/1‑94 (MQ=60)

                                                           ACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGC                                    <  SRR4302540.10082563/94‑1 (MQ=60)

                                                              AAGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAA                                 >  SRR4302540.4889590/1‑94 (MQ=60)

                                                               AGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAA                                <  SRR4302540.2758814/94‑1 (MQ=60)

                                                               AGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAA                                <  SRR4302540.7292251/94‑1 (MQ=60)

                                                               AGCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAA                                >  SRR4302540.6060992/1‑94 (MQ=60)

                                                                GCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAA                               >  SRR4302540.4336550/1‑94 (MQ=60)

                                                                GCTGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAA                               <  SRR4302540.6706205/94‑1 (MQ=60)

                                                                  TGGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAA                             >  SRR4302540.928785/1‑94 (MQ=60)

                                                                   GGCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAG                            <  SRR4302540.2678288/94‑1 (MQ=60)

                                                                    GCGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGT                           >  SRR4302540.5022459/1‑94 (MQ=60)

                                                                     CGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTC                          <  SRR4302540.2926075/94‑1 (MQ=60)

                                                                     CGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTC                          <  SRR4302540.63244/94‑1 (MQ=60)

                                                                     CGAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCC‑AAAAAGTCT                         <  SRR4302540.1214/94‑1 (MQ=60)

                                                                      GAGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCT                         <  SRR4302540.8396945/94‑1 (MQ=60)

                                                                       AGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTT                        <  SRR4302540.2207856/94‑1 (MQ=60)

                                                                       AGCAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTT                        <  SRR4302540.9699467/94‑1 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      <  SRR4302540.358242/94‑1 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      >  SRR4302540.3429018/1‑94 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      <  SRR4302540.8512929/94‑1 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      >  SRR4302540.8031297/1‑94 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      <  SRR4302540.4464348/94‑1 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      <  SRR4302540.6739288/94‑1 (MQ=60)

                                                                         CAGAATAAAAATCAGCCCACCGATGGATAAGAGTGTAGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTA                      <  SRR4302540.3535896/94‑1 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     <  SRR4302540.674638/94‑1 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     <  SRR4302540.390957/94‑1 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     >  SRR4302540.8308752/1‑94 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     >  SRR4302540.4296264/1‑94 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     <  SRR4302540.3129020/94‑1 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     >  SRR4302540.9085803/1‑94 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     >  SRR4302540.6931545/1‑94 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     >  SRR4302540.6065176/1‑94 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     >  SRR4302540.5657553/1‑94 (MQ=60)

                                                                          AGAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAA                     <  SRR4302540.7107945/94‑1 (MQ=60)

                                                                           GAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAAT                    <  SRR4302540.4515965/94‑1 (MQ=60)

                                                                           GAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAAT                    <  SRR4302540.780684/94‑1 (MQ=60)

                                                                           GAATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAAT                    >  SRR4302540.5000652/1‑94 (MQ=60)

                                                                            AATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATC                   <  SRR4302540.8315175/94‑1 (MQ=60)

                                                                             ATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCA                  >  SRR4302540.9952865/1‑94 (MQ=60)

                                                                             ATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCA                  >  SRR4302540.6743247/1‑94 (MQ=60)

                                                                             ATAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGCGGTCAGGCCAAAAAAGTCTTTAATCA                  >  SRR4302540.2728071/1‑94 (MQ=60)

                                                                              TAAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCAT                 <  SRR4302540.1225078/94‑1 (MQ=60)

                                                                               AAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATC                <  SRR4302540.1171542/94‑1 (MQ=60)

                                                                               AAAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATC                >  SRR4302540.4657003/1‑94 (MQ=60)

                                                                                AAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCC               <  SRR4302540.10116511/94‑1 (MQ=60)

                                                                                AAAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCC               <  SRR4302540.6443601/94‑1 (MQ=60)

                                                                                 AAATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCA              <  SRR4302540.2066009/94‑1 (MQ=60)

                                                                                  AATCAGCCCACCGATGGATAAGAGTGTTGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGTTCAGGCCAAAAAAGTCTTTAATCATCCAG             >  SRR4302540.5424896/1‑94 (MQ=60)

                                                                                  AATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAG             <  SRR4302540.7358360/94‑1 (MQ=60)

                                                                                  AATCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAG             >  SRR4302540.5424898/1‑94 (MQ=60)

                                                                                    TCAGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAA           <  SRR4302540.8762579/94‑1 (MQ=60)

                                                                                      AGCCCGCCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAC         <  SRR4302540.18015/94‑1 (MQ=60)

                                                                                      AGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAC         <  SRR4302540.6749073/94‑1 (MQ=60)

                                                                                      AGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAC         >  SRR4302540.1193288/1‑94 (MQ=60)

                                                                                      AGCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAC         <  SRR4302540.5556525/94‑1 (MQ=60)

                                                                                       GCCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACT        <  SRR4302540.2468111/94‑1 (MQ=60)

                                                                                        CCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTG       >  SRR4302540.7928308/1‑94 (MQ=60)

                                                                                        CCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTG       >  SRR4302540.6372585/1‑94 (MQ=60)

                                                                                        CCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTG       <  SRR4302540.824125/94‑1 (MQ=60)

                                                                                        CCCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTG       <  SRR4302540.661964/94‑1 (MQ=60)

                                                                                         CCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGG      >  SRR4302540.2447677/1‑94 (MQ=60)

                                                                                         CCACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGG      <  SRR4302540.1358168/94‑1 (MQ=60)

                                                                                           ACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCA    <  SRR4302540.836430/94‑1 (MQ=60)

                                                                                           ACCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCA    <  SRR4302540.3797095/94‑1 (MQ=60)

                                                                                            CCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCAT   <  SRR4302540.5190342/94‑1 (MQ=60)

                                                                                            CCGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCAT   <  SRR4302540.8001374/94‑1 (MQ=60)

                                                                                             CGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCGTC  >  SRR4302540.5086435/1‑94 (MQ=60)

                                                                                             CGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCATC  >  SRR4302540.6975317/1‑94 (MQ=60)

                                                                                             CGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCATC  <  SRR4302540.3632397/94‑1 (MQ=60)

                                                                                             CGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCATC  <  SRR4302540.5724746/94‑1 (MQ=60)

CTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAACTGGCATC  >  NC_000913/4518187‑4518373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`