Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,572,114 |
T→C |
R137R (CGT→CGC) |
yjiU → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,572,114 | 0 | T | C | 100.0%
| 850.1
/ NA
| 264 | R137R (CGT→CGC) | yjiU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/137); total (127/137) |
Only 100 of 273 total aligned reads displayed.
ATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGA > NC_000913/4572025‑4572203
|
tCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACt < 2:5724723/93‑1 (MQ=255)
ccGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTa < 2:1598973/93‑1 (MQ=255)
cGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAt < 1:693275/93‑1 (MQ=255)
gCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAtt > 1:1320234/1‑93 (MQ=255)
gCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAtt > 1:5524376/1‑93 (MQ=255)
cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa < 2:525555/93‑1 (MQ=255)
cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa < 1:5234499/93‑1 (MQ=255)
cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa < 1:4937020/93‑1 (MQ=255)
cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa < 1:4794754/93‑1 (MQ=255)
gATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAgg > 2:3713734/1‑93 (MQ=255)
gATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAgg < 2:2585837/93‑1 (MQ=255)
gATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAgg > 1:3714727/1‑93 (MQ=255)
attattAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGt < 2:4744284/93‑1 (MQ=255)
attattAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGt < 2:1165054/93‑1 (MQ=255)
ttattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTg > 1:1154566/1‑93 (MQ=255)
ttattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTg > 2:3097081/1‑93 (MQ=255)
tattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTgg < 1:3085716/93‑1 (MQ=255)
tattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTgg > 2:1861695/1‑93 (MQ=255)
attaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTggg > 2:4906972/1‑93 (MQ=255)
attaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTACTCGGTggg > 1:1481203/1‑93 (MQ=255)
ttaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGc > 1:664729/1‑93 (MQ=255)
ttaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGc < 1:2891025/93‑1 (MQ=255)
taATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGcc > 2:412404/1‑93 (MQ=255)
tGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAtt > 2:1789859/1‑93 (MQ=255)
gATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAttt < 2:4095848/93‑1 (MQ=255)
atatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAtttt > 1:4493314/1‑93 (MQ=255)
atatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAtttt < 2:1720932/93‑1 (MQ=255)
tatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTa < 1:4555571/93‑1 (MQ=255)
tatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTa < 2:4389161/93‑1 (MQ=255)
tatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTa < 1:5489544/93‑1 (MQ=255)
atTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAc < 2:621879/93‑1 (MQ=255)
atTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAc > 1:3467733/1‑93 (MQ=255)
ttGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACg < 2:2146015/93‑1 (MQ=255)
aCAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTAc > 1:6219939/1‑93 (MQ=255)
cAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACt > 1:6276437/1‑93 (MQ=255)
aGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTa < 1:3413329/93‑1 (MQ=255)
aGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGGGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGGCATTTTACGTTACTa > 2:1390049/1‑93 (MQ=255)
ggTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTaa < 1:2454185/93‑1 (MQ=255)
gTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAat > 2:952086/1‑93 (MQ=255)
gTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAat < 1:5175701/93‑1 (MQ=255)
tttGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAata < 1:2620436/93‑1 (MQ=255)
tttGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAata < 2:2841766/93‑1 (MQ=255)
tGTAGTGCCAGTGGCTGTGGCTACAGTGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATc > 2:1144131/1‑93 (MQ=255)
tAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGt < 1:5699351/93‑1 (MQ=255)
gTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGc < 2:517586/93‑1 (MQ=255)
tGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGcc > 2:3165233/1‑93 (MQ=255)
ccAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGTCCATTTTACGTTACTAATATCGTGCCCa < 1:410076/93‑1 (MQ=255)
cAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCAc < 1:4390264/93‑1 (MQ=255)
cAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCAc < 2:5595557/93‑1 (MQ=255)
aGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCAcc > 2:5380291/1‑93 (MQ=255)
gtggctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCg > 2:6047623/1‑93 (MQ=255)
tggctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGt > 1:1836049/1‑93 (MQ=255)
ggctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGtt < 1:5785693/93‑1 (MQ=255)
ctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCt < 2:2421834/93‑1 (MQ=255)
ctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCt > 2:3546169/1‑93 (MQ=255)
gtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTag < 1:2635777/93‑1 (MQ=255)
gtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTag < 2:5406851/93‑1 (MQ=255)
tggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTaga > 2:3301397/1‑93 (MQ=255)
ggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTagag > 2:506271/1‑93 (MQ=255)
ggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTagag < 1:465048/93‑1 (MQ=255)
gctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGt > 1:1920913/1‑93 (MQ=255)
tACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAt > 2:4170788/1‑93 (MQ=255)
aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt < 1:3784612/93‑1 (MQ=255)
aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt < 1:2002837/93‑1 (MQ=255)
aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt < 2:4299818/93‑1 (MQ=255)
aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt > 1:4661297/1‑93 (MQ=255)
agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt < 2:3872760/93‑1 (MQ=255)
agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt < 1:2505910/93‑1 (MQ=255)
agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt < 2:2205804/93‑1 (MQ=255)
agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt > 1:509288/1‑93 (MQ=255)
agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt < 1:6121147/93‑1 (MQ=255)
gagGCATGTGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTc > 2:6151429/1‑93 (MQ=255)
gagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTc < 2:1450255/93‑1 (MQ=255)
cATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGa > 2:6288809/1‑93 (MQ=255)
aGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACttt < 2:2010602/93‑1 (MQ=255)
aGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACttt > 2:3255460/1‑93 (MQ=255)
gTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTa < 2:4262314/93‑1 (MQ=255)
gTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTa > 1:1060831/1‑93 (MQ=255)
gggAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTAcc < 2:5938373/93‑1 (MQ=255)
gggAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTAcc > 2:4693362/1‑93 (MQ=255)
gAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAg > 1:3546950/1‑93 (MQ=255)
gAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAg < 1:2772514/93‑1 (MQ=255)
gAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAg < 1:4245625/93‑1 (MQ=255)
cAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgat < 2:276570/93‑1 (MQ=255)
aGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgatg > 1:1512228/1‑93 (MQ=255)
gCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgatga > 2:1023132/1‑93 (MQ=255)
gCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgatga < 2:5432193/93‑1 (MQ=255)
cccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGaa < 2:132638/93‑1 (MQ=255)
cccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGaa < 1:2987121/93‑1 (MQ=255)
ccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAg < 1:5317274/93‑1 (MQ=255)
ccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAg < 1:2223099/93‑1 (MQ=255)
ccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAg > 2:5957967/1‑93 (MQ=255)
cTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAgg > 1:547573/1‑93 (MQ=255)
cTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAgg > 2:79666/1‑93 (MQ=255)
ttCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAAGc > 2:3930036/1‑93 (MQ=255)
ggCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCCGTGATGAAGGCAAag > 2:2516238/1‑93 (MQ=255)
ggCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAag > 1:3648977/1‑93 (MQ=255)
gcgcgcACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAaga < 1:736187/93‑1 (MQ=255)
gcgcgcACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAaga < 2:4509860/93‑1 (MQ=255)
gcgcgcACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAaga < 1:332795/93‑1 (MQ=255)
|
ATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGA > NC_000913/4572025‑4572203
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGGGC > NC_000913/4572022‑4572207
|
AGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCG > SRR4302533.5551156/1‑94 (MQ=60)
AGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCG > SRR4302533.1766162/1‑94 (MQ=60)
AGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACACAGGCATGAGTGGGAAACAGCCCTTCCGGCGCG > SRR4302533.3451460/1‑94 (MQ=60)
CATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCA > SRR4302533.3159498/1‑94 (MQ=60)
TTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACT < SRR4302533.806907/94‑1 (MQ=60)
TTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACT > SRR4302533.4576642/1‑94 (MQ=60)
TTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACT > SRR4302533.575312/1‑94 (MQ=60)
TCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTA < SRR4302533.4436495/94‑1 (MQ=60)
CCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAT < SRR4302533.2518442/94‑1 (MQ=60)
CGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATT > SRR4302533.5557728/1‑94 (MQ=60)
CGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATT > SRR4302533.4137114/1‑94 (MQ=60)
CGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATT < SRR4302533.697371/94‑1 (MQ=60)
CGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATT > SRR4302533.1328160/1‑94 (MQ=60)
CGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATT > SRR4302533.4861009/1‑94 (MQ=60)
GCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTA > SRR4302533.3733404/1‑94 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG < SRR4302533.4966911/94‑1 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG < SRR4302533.1397973/94‑1 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG < SRR4302533.5265977/94‑1 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG < SRR4302533.4823799/94‑1 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG < SRR4302533.5276721/94‑1 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG > SRR4302533.2323157/1‑94 (MQ=60)
CTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAG < SRR4302533.729942/94‑1 (MQ=60)
TGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGG > SRR4302533.3737533/1‑94 (MQ=60)
ATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTG > SRR4302533.5007652/1‑94 (MQ=60)
ATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTG > SRR4302533.1997686/1‑94 (MQ=60)
ATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTG > SRR4302533.1161489/1‑94 (MQ=60)
TTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGG < SRR4302533.5408455/94‑1 (MQ=60)
TTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGG > SRR4302533.4628660/1‑94 (MQ=60)
TTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGG > SRR4302533.4432239/1‑94 (MQ=60)
TATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGG < SRR4302533.3104687/94‑1 (MQ=60)
TATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTACTCGGTGGG > SRR4302533.1490146/1‑94 (MQ=60)
ATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGC > SRR4302533.668654/1‑94 (MQ=60)
TTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCC > SRR4302533.6799/1‑94 (MQ=60)
TTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCC < SRR4302533.2908794/94‑1 (MQ=60)
AATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAT > SRR4302533.383436/1‑94 (MQ=60)
TGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTT < SRR4302533.3441255/94‑1 (MQ=60)
TGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTT < SRR4302533.5960054/94‑1 (MQ=60)
GATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTT > SRR4302533.4520527/1‑94 (MQ=60)
ATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTA > SRR4302533.690122/1‑94 (MQ=60)
ATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTA > SRR4302533.259910/1‑94 (MQ=60)
TATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAC < SRR4302533.5522635/94‑1 (MQ=60)
TATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAC < SRR4302533.4583202/94‑1 (MQ=60)
TATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAC > SRR4302533.3489137/1‑94 (MQ=60)
ATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACG > SRR4302533.2811310/1‑94 (MQ=60)
TGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACANAGGCATGAGTGGGAANCAGCCCNTCCGNCGNGCNNNNNNAGGTGNGCCANNNTNCNNT > SRR4302533.3191169/1‑94 (MQ=60)
TGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTT < SRR4302533.1291319/94‑1 (MQ=60)
AACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTAC > SRR4302533.6257227/1‑94 (MQ=60)
AACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTAC > SRR4302533.4710424/1‑94 (MQ=60)
ACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACT > SRR4302533.6313916/1‑94 (MQ=60)
ACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACT < SRR4302533.3097042/94‑1 (MQ=60)
ACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACT > SRR4302533.1694875/1‑94 (MQ=60)
AGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAA < SRR4302533.3133289/94‑1 (MQ=60)
AGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAA < SRR4302533.6258932/94‑1 (MQ=60)
AGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAA < SRR4302533.5196022/94‑1 (MQ=60)
AGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAA > SRR4302533.3389573/1‑94 (MQ=60)
AGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAA < SRR4302533.3434414/94‑1 (MQ=60)
GGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAAT < SRR4302533.2469332/94‑1 (MQ=60)
GGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAAT > SRR4302533.5509462/1‑94 (MQ=60)
GGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAAT < SRR4302533.2487964/94‑1 (MQ=60)
GTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATA < SRR4302533.5206962/94‑1 (MQ=60)
TTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATAT < SRR4302533.2602124/94‑1 (MQ=60)
TTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATAT < SRR4302533.2636520/94‑1 (MQ=60)
TTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATC < SRR4302533.4818238/94‑1 (MQ=60)
TGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCG < SRR4302533.5549063/94‑1 (MQ=60)
TGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCG > SRR4302533.2650785/1‑94 (MQ=60)
TGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCG > SRR4302533.1876565/1‑94 (MQ=60)
TAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTG < SRR4302533.5733771/94‑1 (MQ=60)
GCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCA > SRR4302533.4532779/1‑94 (MQ=60)
CCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGTCCATTTTACGTTACTAATATCGTGCCCAC < SRR4302533.412535/94‑1 (MQ=60)
CAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACC < SRR4302533.4416770/94‑1 (MQ=60)
CAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACC > SRR4302533.5681586/1‑94 (MQ=60)
AGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCG > SRR4302533.5399644/1‑94 (MQ=60)
GTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGT > SRR4302533.1847250/1‑94 (MQ=60)
GTGGCTGTGGCTACAGAGGCATGAGGGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGT > SRR4302533.4017659/1‑94 (MQ=60)
GGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTC < SRR4302533.5820636/94‑1 (MQ=60)
GGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTC < SRR4302533.3533424/94‑1 (MQ=60)
GGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGAGGGCCATTTTACGTTACTAATATCGTGCGCACCGTTC > SRR4302533.1820218/1‑94 (MQ=60)
GGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGAGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTC > SRR4302533.3765198/1‑94 (MQ=60)
CTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTA > SRR4302533.2005068/1‑94 (MQ=60)
GTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGA < SRR4302533.2651975/94‑1 (MQ=60)
GTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGA < SRR4302533.2108083/94‑1 (MQ=60)
TGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAG > SRR4302533.5030210/1‑94 (MQ=60)
GGNTACNNAGGCATGAGTGGGANACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGT < SRR4302533.6185280/94‑1 (MQ=60)
GGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGT > SRR4302533.3053028/1‑94 (MQ=60)
GGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGT > SRR4302533.1932639/1‑94 (MQ=60)
GGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGT < SRR4302533.467824/94‑1 (MQ=60)
GGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGT < SRR4302533.467823/94‑1 (MQ=60)
CTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAT > SRR4302533.4675733/1‑94 (MQ=60)
TACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATT > SRR4302533.4689546/1‑94 (MQ=60)
ACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTG < SRR4302533.3807786/94‑1 (MQ=60)
ACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTG < SRR4302533.722872/94‑1 (MQ=60)
ACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTG < SRR4302533.2407737/94‑1 (MQ=60)
ACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTG > SRR4302533.3621337/1‑94 (MQ=60)
ACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTG > SRR4302533.4939132/1‑94 (MQ=60)
ACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTG < SRR4302533.2015174/94‑1 (MQ=60)
CAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGT < SRR4302533.5611847/94‑1 (MQ=60)
CAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGT < SRR4302533.2835889/94‑1 (MQ=60)
CAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGT > SRR4302533.512313/1‑94 (MQ=60)
AGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAGTATCGTGCCCACCGTTCTATAGTATTGTC > SRR4302533.4108307/1‑94 (MQ=60)
AGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTC < SRR4302533.2521361/94‑1 (MQ=60)
AGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTC < SRR4302533.6158058/94‑1 (MQ=60)
AGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTC > SRR4302533.6169087/1‑94 (MQ=60)
AGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAG < SRR4302533.1284089/94‑1 (MQ=60)
GGTATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGG < SRR4302533.5341682/94‑1 (MQ=60)
GGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGG < SRR4302533.143276/94‑1 (MQ=60)
CATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGAC < SRR4302533.3495738/94‑1 (MQ=60)
CATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGAC < SRR4302533.6344737/94‑1 (MQ=60)
TGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTT < SRR4302533.3685292/94‑1 (MQ=60)
GAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTT > SRR4302533.913933/1‑94 (MQ=60)
GAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTT > SRR4302533.5240256/1‑94 (MQ=60)
AGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTA > SRR4302533.1067066/1‑94 (MQ=60)
AGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTA > SRR4302533.6296303/1‑94 (MQ=60)
AGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTA > SRR4302533.5547033/1‑94 (MQ=60)
GGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCA < SRR4302533.4377130/94‑1 (MQ=60)
GGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAG < SRR4302533.3394350/94‑1 (MQ=60)
GGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAG > SRR4302533.3568811/1‑94 (MQ=60)
GAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGT < SRR4302533.2789528/94‑1 (MQ=60)
GAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGT < SRR4302533.4271256/94‑1 (MQ=60)
AAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTG < SRR4302533.364565/94‑1 (MQ=60)
AACAGCCCTTCCGGCGCGCACTATTAGGGGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGA > SRR4302533.1709509/1‑94 (MQ=60)
CAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATG > SRR4302533.5256104/1‑94 (MQ=60)
CAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATG > SRR4302533.1521341/1‑94 (MQ=60)
CAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATG > SRR4302533.1899138/1‑94 (MQ=60)
AGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGA < SRR4302533.1160783/94‑1 (MQ=60)
CCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAG < SRR4302533.3005394/94‑1 (MQ=60)
CCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGG < SRR4302533.5349140/94‑1 (MQ=60)
CCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGG < SRR4302533.2666548/94‑1 (MQ=60)
CCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGG > SRR4302533.550824/1‑94 (MQ=60)
CCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGG < SRR4302533.2236831/94‑1 (MQ=60)
CTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGC > SRR4302533.6132342/1‑94 (MQ=60)
TTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCA < SRR4302533.2922139/94‑1 (MQ=60)
CGGCGCGCACTATTAGGTGGTCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAG < SRR4302533.151638/94‑1 (MQ=60)
CGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAG > SRR4302533.3671414/1‑94 (MQ=60)
CGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAG > SRR4302533.4268661/1‑94 (MQ=60)
GGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGA > SRR4302533.276843/1‑94 (MQ=60)
GCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAG < SRR4302533.334831/94‑1 (MQ=60)
GCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAG < SRR4302533.740517/94‑1 (MQ=60)
CGCGCACTATTAGGTGGTCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGG < SRR4302533.2408082/94‑1 (MQ=60)
CGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGG < SRR4302533.2425417/94‑1 (MQ=60)
CGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGG < SRR4302533.269330/94‑1 (MQ=60)
CGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAANGAGGGC > SRR4302533.600911/1‑94 (MQ=60)
CGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGGGC < SRR4302533.187729/94‑1 (MQ=60)
CGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGGGC > SRR4302533.171719/1‑94 (MQ=60)
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AGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGGGC > NC_000913/4572022‑4572207
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
