Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,588,681 |
A→G |
Y62H (TAC→CAC) |
yjiY ← |
putative carbon starvation protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,588,681 | 0 | A | G | 100.0%
| 687.7
/ NA
| 209 | Y62H (TAC→CAC) | yjiY | putative carbon starvation protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/95); total (114/95) |
Only 100 of 218 total aligned reads displayed.
GGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTACAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATG > NC_000913/4588591‑4588770
|
ggTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCa < 1:108675/93‑1 (MQ=255)
ggTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCa < 2:289665/93‑1 (MQ=255)
ggTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCa < 1:5942956/93‑1 (MQ=255)
ggTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGCTTCATCACCTTCTGGGCGATGTGCa > 2:5508387/1‑93 (MQ=255)
gTTGGTGTGAACGTAGTTCAGACCGTCGTTGTTAATAGCCGCAGGCGTCGGGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAg < 2:804098/93‑1 (MQ=255)
gTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGCTTCATCACCTTCTGGGCGATGTGCAg > 1:1005266/1‑93 (MQ=255)
ttGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGa > 2:6093481/1‑93 (MQ=255)
gTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTg > 2:4896628/1‑93 (MQ=255)
gTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTg > 1:3505942/1‑93 (MQ=255)
tCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgt < 1:4694508/93‑1 (MQ=255)
cGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgta < 1:2519026/93‑1 (MQ=255)
cGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgta < 1:3433586/93‑1 (MQ=255)
ggAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgtag > 2:4514582/1‑93 (MQ=255)
ggAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgtag > 1:3553871/1‑93 (MQ=255)
ggAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgtag > 1:3041680/1‑93 (MQ=255)
gAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTgtagt < 2:3653808/93‑1 (MQ=255)
aCGTAGTTCAGACCGTCGTTGTTAATACCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGtagtag < 2:3185405/93‑1 (MQ=255)
aCGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGtagtag > 2:6279706/1‑93 (MQ=255)
aCGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGtagtag < 1:688254/93‑1 (MQ=255)
aCGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGtagtag < 1:3744415/93‑1 (MQ=255)
cGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGc < 2:1340547/93‑1 (MQ=255)
tAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGa > 1:4755723/1‑93 (MQ=255)
aGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGAt < 2:1080124/93‑1 (MQ=255)
aGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGAt > 1:2086636/1‑93 (MQ=255)
gTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATa < 2:2582025/93‑1 (MQ=255)
gTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATa > 1:4152617/1‑93 (MQ=255)
ttCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATAc < 1:125853/93‑1 (MQ=255)
ttCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATAc < 1:337864/93‑1 (MQ=255)
tCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACg < 2:1719379/93‑1 (MQ=255)
cAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGc > 2:5078249/1‑93 (MQ=255)
aGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGcc > 2:2695192/1‑93 (MQ=255)
aGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCCTCTGGGCGATGTGCAGACTGTAGTAGCGATACGcc > 2:3817452/1‑93 (MQ=255)
aCCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGccac > 1:5401009/1‑93 (MQ=255)
aCCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGccac < 1:2071073/93‑1 (MQ=255)
ccGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGccacc < 2:3004497/93‑1 (MQ=255)
tcgtTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGa > 2:1612653/1‑93 (MQ=255)
gttgttAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATa > 1:322073/1‑93 (MQ=255)
gttgttAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATa > 2:4914881/1‑93 (MQ=255)
tgttAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATaca > 2:5670315/1‑93 (MQ=255)
gttAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATacac > 2:2483853/1‑93 (MQ=255)
gttAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATacac > 2:31190/1‑93 (MQ=255)
taataaCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCg > 2:5842130/1‑93 (MQ=255)
aataaCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGa < 2:4985350/93‑1 (MQ=255)
ataaCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGAt < 1:4504581/93‑1 (MQ=255)
ataaCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGAt > 1:387352/1‑93 (MQ=255)
aaCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATAc < 2:4031916/93‑1 (MQ=255)
aCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACa > 1:2929545/1‑93 (MQ=255)
aCCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACa > 2:2330003/1‑93 (MQ=255)
ccGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACag < 2:2633255/93‑1 (MQ=255)
ccGCAGGCGTCGCGCGCGTGGGGTCGAGTTTAATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACag < 2:3310088/93‑1 (MQ=255)
cGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACaga < 1:4947949/93‑1 (MQ=255)
gCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACagag < 1:1977679/93‑1 (MQ=255)
aGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTGTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGc < 2:2671674/93‑1 (MQ=255)
ggCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCg > 2:3259404/1‑93 (MQ=255)
gCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGa > 2:5914130/1‑93 (MQ=255)
cGTCGCGCGCGTGGGGTCGAGTCTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGAc < 1:6111250/93‑1 (MQ=255)
gTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGAcc > 1:4023415/1‑93 (MQ=255)
gTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGAcc > 1:5025959/1‑93 (MQ=255)
tCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCa > 2:1499617/1‑93 (MQ=255)
tCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCa > 1:2583114/1‑93 (MQ=255)
cgcgcgTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGa < 2:3090734/93‑1 (MQ=255)
cgcgcgTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGa < 1:4125971/93‑1 (MQ=255)
gcgcgTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGAt > 2:4128628/1‑93 (MQ=255)
gcgTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATcc > 2:126781/1‑93 (MQ=255)
gTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCcac > 2:458229/1‑93 (MQ=255)
tGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCcaca > 1:5588973/1‑93 (MQ=255)
tGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCcaca > 1:5504642/1‑93 (MQ=255)
ggggTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAg < 1:757808/93‑1 (MQ=255)
gggTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAgg < 2:1140653/93‑1 (MQ=255)
gTCGAGTTTCATCGCCTTGCGGGCGATGAGCAGACTGTAGGAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgc < 2:3736030/93‑1 (MQ=255)
gTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgc > 2:3423589/1‑93 (MQ=255)
gTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgc < 1:3997763/93‑1 (MQ=255)
tCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgcg < 2:3589980/93‑1 (MQ=255)
cGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgcgc > 2:2405627/1‑93 (MQ=255)
cGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgcgc < 1:5134387/93‑1 (MQ=255)
gAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGgcgcg > 1:2757128/1‑92 (MQ=255)
gTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGa < 2:4214984/93‑1 (MQ=255)
gTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGa > 2:4647843/1‑93 (MQ=255)
tttCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTTAt < 2:3709453/93‑1 (MQ=255)
tttCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGAt < 2:692767/93‑1 (MQ=255)
atcaCCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGc < 1:1624130/93‑1 (MQ=255)
tcaCCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCt < 2:69727/93‑1 (MQ=255)
tcaCCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCt > 1:3012833/1‑93 (MQ=255)
aCCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTcc > 1:1195536/1‑93 (MQ=255)
ccTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTccc > 2:2509965/1‑93 (MQ=255)
ccTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTccc > 1:1396697/1‑93 (MQ=255)
ccTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTccc > 2:5189125/1‑93 (MQ=255)
cTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTcccc < 2:4374672/93‑1 (MQ=255)
cTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTcccc < 2:4435676/93‑1 (MQ=255)
ttCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTccccc < 1:5274451/93‑1 (MQ=255)
ttCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTccccc > 2:4752138/1‑93 (MQ=255)
ttCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTccccc > 1:2334716/1‑93 (MQ=255)
tCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTcccccc > 2:1970263/1‑93 (MQ=255)
tCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTcccccc > 2:728445/1‑93 (MQ=255)
gCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGt > 2:2073585/1‑93 (MQ=255)
cGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTa > 1:5782901/1‑93 (MQ=255)
gATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTaa > 2:5761972/1‑93 (MQ=255)
aTGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAAt < 1:3663666/93‑1 (MQ=255)
aTGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAAt > 2:2744939/1‑93 (MQ=255)
aTGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAAt > 2:2189432/1‑93 (MQ=255)
|
GGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTACAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATG > NC_000913/4588591‑4588770
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACGGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTACAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAA > NC_000913/4588588‑4588773
|
AACGGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTG < SRR4302533.1940398/94‑1 (MQ=60)
AACGGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTG > SRR4302533.5622746/1‑94 (MQ=60)
ACGGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGC > SRR4302533.4174695/1‑94 (MQ=60)
GGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAG < SRR4302533.109360/94‑1 (MQ=60)
GGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAG < SRR4302533.5978896/94‑1 (MQ=60)
GGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAG < SRR4302533.5221717/94‑1 (MQ=60)
GGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGCTTCATCACCTTCTGGGCGATGTGCAG > SRR4302533.1011146/1‑94 (MQ=60)
TGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACT > SRR4302533.5909129/1‑94 (MQ=60)
GGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTG > SRR4302533.3527554/1‑94 (MQ=60)
TCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTA < SRR4302533.4722953/94‑1 (MQ=60)
TCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTA < SRR4302533.701768/94‑1 (MQ=60)
TCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTA > SRR4302533.76665/1‑94 (MQ=60)
CGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAG > SRR4302533.3575767/1‑94 (MQ=60)
CGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAG < SRR4302533.3454800/94‑1 (MQ=60)
CGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAG > SRR4302533.3060299/1‑94 (MQ=60)
CGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAG < SRR4302533.2534547/94‑1 (MQ=60)
AACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGTGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAG < SRR4302533.2075007/94‑1 (MQ=60)
AACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAG < SRR4302533.5294247/94‑1 (MQ=60)
AACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAG > SRR4302533.3768254/1‑94 (MQ=60)
AACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAG < SRR4302533.2336382/94‑1 (MQ=60)
ACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGC < SRR4302533.692324/94‑1 (MQ=60)
ACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGC < SRR4302533.3767379/94‑1 (MQ=60)
CGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCG > SRR4302533.10871/1‑94 (MQ=60)
GTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGA > SRR4302533.4784582/1‑94 (MQ=60)
TAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGAT > SRR4302533.3788812/1‑94 (MQ=60)
TAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGAT > SRR4302533.2099485/1‑94 (MQ=60)
AGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATA > SRR4302533.4177777/1‑94 (MQ=60)
TTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACG < SRR4302533.126640/94‑1 (MQ=60)
TTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACG < SRR4302533.339927/94‑1 (MQ=60)
TCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGC < SRR4302533.2542699/94‑1 (MQ=60)
TCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGC > SRR4302533.3722962/1‑94 (MQ=60)
AGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCA < SRR4302533.3553965/94‑1 (MQ=60)
GACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCAC > SRR4302533.5433464/1‑94 (MQ=60)
ACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACC > SRR4302533.4207409/1‑94 (MQ=60)
ACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACC < SRR4302533.2083830/94‑1 (MQ=60)
ACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACC > SRR4302533.329406/1‑94 (MQ=60)
CCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCA > SRR4302533.4694665/1‑94 (MQ=60)
CGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATA < SRR4302533.5128515/94‑1 (MQ=60)
CGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATA > SRR4302533.324041/1‑94 (MQ=60)
GTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATAC > SRR4302533.4046753/1‑94 (MQ=60)
GTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATAC < SRR4302533.2400091/94‑1 (MQ=60)
TTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACA < SRR4302533.5936897/94‑1 (MQ=60)
TGTTAACAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACAC < SRR4302533.3509556/94‑1 (MQ=60)
GTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACC < SRR4302533.2096245/94‑1 (MQ=60)
GTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACC < SRR4302533.3029385/94‑1 (MQ=60)
AATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGAT > SRR4302533.389688/1‑94 (MQ=60)
ATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATA > SRR4302533.4865050/1‑94 (MQ=60)
ATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATA < SRR4302533.5546634/94‑1 (MQ=60)
ATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATA < SRR4302533.4531868/94‑1 (MQ=60)
AACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACA > SRR4302533.2947467/1‑94 (MQ=60)
ACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAG < SRR4302533.1543018/94‑1 (MQ=60)
CCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGA > SRR4302533.5038864/1‑94 (MQ=60)
CGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAG < SRR4302533.4977910/94‑1 (MQ=60)
CGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAG < SRR4302533.1856175/94‑1 (MQ=60)
CGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAG > SRR4302533.191328/1‑94 (MQ=60)
CGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAG > SRR4302533.6100995/1‑94 (MQ=60)
GCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGG < SRR4302533.1989790/94‑1 (MQ=60)
AGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGTCTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCG > SRR4302533.6341803/1‑94 (MQ=60)
AGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCG > SRR4302533.2890728/1‑94 (MQ=60)
GGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGA > SRR4302533.535028/1‑94 (MQ=60)
CGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACC > SRR4302533.5056393/1‑94 (MQ=60)
CGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACC > SRR4302533.4047910/1‑94 (MQ=60)
CGTCGCGCGCGTGGGGTCGAGTCTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACC < SRR4302533.6148138/94‑1 (MQ=60)
ggctcgcgcgtgagcgCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCA < SRR4302533.4401978/78‑1 (MQ=60)
GTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCA > SRR4302533.2598997/1‑94 (MQ=60)
CGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGCGGCGACCACGAT > SRR4302533.3279903/1‑94 (MQ=60)
CGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGAT < SRR4302533.4151016/94‑1 (MQ=60)
CGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGAT > SRR4302533.3053100/1‑94 (MQ=60)
GTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACA > SRR4302533.5537856/1‑94 (MQ=60)
GTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACA > SRR4302533.5622739/1‑94 (MQ=60)
TGGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAG > SRR4302533.5630799/1‑94 (MQ=60)
GGGGTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGG < SRR4302533.762269/94‑1 (MQ=60)
GTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCG < SRR4302533.4022103/94‑1 (MQ=60)
GTCGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCG > SRR4302533.1404247/1‑94 (MQ=60)
CGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCT > SRR4302533.4053490/1‑94 (MQ=60)
CGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCT < SRR4302533.5165407/94‑1 (MQ=60)
CGAGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCG > SRR4302533.2774034/1‑94 (MQ=60)
AGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGA > SRR4302533.3922648/1‑94 (MQ=60)
AGTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGA > SRR4302533.2732835/1‑94 (MQ=60)
GTTTCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGAT < SRR4302533.1197887/94‑1 (MQ=60)
TTTCATCACCTGCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATG < SRR4302533.3611223/94‑1 (MQ=60)
TCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTG > SRR4302533.1205620/1‑94 (MQ=60)
TCATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTG < SRR4302533.4735105/94‑1 (MQ=60)
CATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGC < SRR4302533.3140054/94‑1 (MQ=60)
ATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCT < SRR4302533.1633967/94‑1 (MQ=60)
ATCACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCT > SRR4302533.3031264/1‑94 (MQ=60)
CACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCC < SRR4302533.4172959/94‑1 (MQ=60)
CACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCC > SRR4302533.1202722/1‑94 (MQ=60)
ACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCC > SRR4302533.1405116/1‑94 (MQ=60)
ACCTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCC > SRR4302533.2704332/1‑94 (MQ=60)
CTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCC < SRR4302533.545195/94‑1 (MQ=60)
CTTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCC > SRR4302533.2349171/1‑94 (MQ=60)
TTCTGGGCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCC < SRR4302533.5306076/94‑1 (MQ=60)
TTCTGGGCGAGGTGCAGTCTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCC < SRR4302533.21276/94‑1 (MQ=60)
GCGATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTA > SRR4302533.5817828/1‑94 (MQ=60)
ATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATG < SRR4302533.3686187/94‑1 (MQ=60)
ATGTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATG < SRR4302533.3441762/94‑1 (MQ=60)
GTGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCA < SRR4302533.1126869/94‑1 (MQ=60)
TGCAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAA > SRR4302533.1468958/1‑94 (MQ=60)
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AACGGTTGGTCGGAACGTAGTTCAGACCGTCGTTGTTAATAACCGCAGGCGTCGCGCGCGTGGGGTCGAGTTTCATCACCTTCTGGGCGATGTACAGACTGTAGTAGCGATACGCCACCAGATACACCGATACAGAGGCGACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAA > NC_000913/4588588‑4588773
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
