Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,253,742 Δ1 bp coding (551/552 nt) yhaNM ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,253,7410G.99.8% 1781.2 / ‑3.3 394coding (552/552 nt)yhaNMhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base . (222/170);  total (224/170)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 441 total aligned reads displayed.

GATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGAT  >  NC_000913/3253648‑3253830
                                                                                             |                                                                                         
  tAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgtt                                                                                         >  1:781028/1‑92 (MQ=255)
  tAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgtt                                                                                         <  2:4660437/94‑3 (MQ=255)
   aaCGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgttc                                                                                        >  2:1642651/1‑91 (MQ=255)
    aCGCACAATTTAGCTTCGCGGAATCGGGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgttct                                                                                       >  2:5171748/1‑90 (MQ=255)
      gCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTgg                                                                                    >  1:3569159/1‑94 (MQ=255)
      gCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTgg                                                                                    >  2:7397812/1‑94 (MQ=255)
       cacaATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGa                                                                                   >  2:1183763/1‑94 (MQ=255)
         caATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGaaa                                                                                 <  2:9558662/94‑1 (MQ=255)
         caATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGaaa                                                                                 <  1:10521566/94‑1 (MQ=255)
         caATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGaaa                                                                                 <  2:3506870/94‑1 (MQ=255)
          aaTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAg                                                                                >  2:8991091/1‑94 (MQ=255)
          aaTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAg                                                                                <  1:8992446/94‑1 (MQ=255)
          aaTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAg                                                                                >  2:4163973/1‑94 (MQ=255)
           aTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGc                                                                               >  1:2263404/1‑94 (MQ=255)
           aTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGc                                                                               >  2:6391987/1‑94 (MQ=255)
            tttAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCa                                                                              >  1:58650/1‑94 (MQ=255)
              tAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCAcc                                                                            <  2:7088127/94‑1 (MQ=255)
               aGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCg                                                                           >  1:10006157/1‑94 (MQ=255)
                gCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGt                                                                          >  2:9871810/1‑94 (MQ=255)
                 cTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGAATTCATTGACGAACTGCAGGATCTCAGCCAGAGTGGTTCTGGAAAGCACTGtg                                                                         >  1:5754099/1‑93 (MQ=255)
                  ttCGCGGAATCGAAAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCa                                                                        <  1:9059513/94‑1 (MQ=255)
                    cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAgg                                                                      >  1:1825961/1‑93 (MQ=255)
                    cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGc                                                                      >  2:10544834/1‑94 (MQ=255)
                    cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGc                                                                      <  1:8252568/94‑1 (MQ=255)
                     gcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTTGGAAGCACCGTCAGCg                                                                     >  1:9615290/1‑94 (MQ=255)
                     gcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCg                                                                     <  2:6668167/94‑1 (MQ=255)
                      cgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTCTGGAAAGCACCGCCAGCgg                                                                    >  1:3389271/1‑94 (MQ=255)
                       ggAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGga                                                                   <  1:774100/94‑1 (MQ=255)
                        gAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGgag                                                                  <  1:10315748/94‑1 (MQ=255)
                         aaTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGgaga                                                                 >  1:4705774/1‑94 (MQ=255)
                         aaTCGAGAATAAAGCGGATCGCCCCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGgaga                                                                 >  1:10076026/1‑94 (MQ=255)
                          aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGAc                                                                <  1:32378/94‑1 (MQ=255)
                          aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGAc                                                                >  2:10176842/1‑94 (MQ=255)
                          aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGAc                                                                <  1:944627/94‑1 (MQ=255)
                            cGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGCctc                                                              >  2:58384/1‑94 (MQ=255)
                            cGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGActc                                                              >  1:5011585/1‑94 (MQ=255)
                            cGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGAcat                                                              >  2:1348988/1‑92 (MQ=255)
                               gaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTg                                                           >  2:5702023/1‑94 (MQ=255)
                                aaTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGc                                                          >  2:8386124/1‑94 (MQ=255)
                                 aTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCt                                                         >  1:546181/1‑94 (MQ=255)
                                  tAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTc                                                        <  1:7447596/94‑1 (MQ=255)
                                   aaaGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCg                                                       >  1:2466950/1‑94 (MQ=255)
                                    aaGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGc                                                      <  1:5324161/94‑1 (MQ=255)
                                      gCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGccc                                                    <  2:2153771/94‑1 (MQ=255)
                                       cGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCct                                                   >  1:3517448/1‑94 (MQ=255)
                                       cGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCct                                                   <  2:8145312/94‑1 (MQ=255)
                                        ggATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctc                                                  <  2:3618790/94‑1 (MQ=255)
                                         gATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctct                                                 >  2:7844939/1‑94 (MQ=255)
                                         gATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctct                                                 <  1:4835669/94‑1 (MQ=255)
                                         gATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctct                                                 >  2:3983819/1‑94 (MQ=255)
                                          aTCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCCGCGTAAACCCTAGCGCGCCCTCTg                                                >  1:9821862/1‑94 (MQ=255)
                                          aTCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTg                                                <  1:4411925/94‑1 (MQ=255)
                                            cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGcc                                              <  2:9227719/94‑1 (MQ=255)
                                             gccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCca                                             >  2:10004913/1‑94 (MQ=255)
                                             gccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCca                                             <  2:746715/94‑1 (MQ=255)
                                               cgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcaca                                           >  1:1202461/1‑94 (MQ=255)
                                                gcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcacac                                          >  2:7720207/1‑94 (MQ=255)
                                                 cAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcacaca                                         >  1:7628270/1‑94 (MQ=255)
                                                  aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCacacac                                        <  2:1396845/94‑1 (MQ=255)
                                                   aaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACg                                       >  1:8038461/1‑94 (MQ=255)
                                                      gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCct                                    >  2:6916505/1‑94 (MQ=255)
                                                      gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCct                                    <  1:2733211/94‑1 (MQ=255)
                                                      gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCct                                    <  1:5119324/94‑1 (MQ=255)
                                                       ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctg                                   <  2:867497/94‑1 (MQ=255)
                                                       ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctg                                   <  2:8513814/94‑1 (MQ=255)
                                                        gACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                  >  2:10415234/1‑94 (MQ=255)
                                                         aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAACGCACCGTCAGCGGCGACTCATGCTGTCCCTCTGCCCCACACGCctgct                                 >  2:1842013/1‑94 (MQ=255)
                                                         aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgct                                 >  2:6592015/1‑94 (MQ=255)
                                                          cTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACCCACGCctgctg                                >  2:2557125/1‑94 (MQ=255)
                                                          cTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgctg                                >  1:5695326/1‑94 (MQ=255)
                                                          cTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgctg                                <  2:2631355/94‑1 (MQ=255)
                                                             cATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGt                             >  1:6375374/1‑94 (MQ=255)
                                                               ttGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTaa                           <  1:10238839/94‑1 (MQ=255)
                                                                tGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTaaa                          >  1:862405/1‑94 (MQ=255)
                                                                 gACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAac                         <  1:3121315/94‑1 (MQ=255)
                                                                 gACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAac                         >  1:9194586/1‑94 (MQ=255)
                                                                  aCGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAaca                        >  1:8876378/1‑94 (MQ=255)
                                                                    gAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacacc                      >  1:3769322/1‑94 (MQ=255)
                                                                     aaCTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacaccc                     >  1:1681415/1‑93 (MQ=255)
                                                                      aCTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacaccac                    <  1:6138787/94‑1 (MQ=255)
                                                                      aCTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacaccac                    <  2:3012214/94‑1 (MQ=255)
                                                                       cTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCTCCCTGCCACACACGCCTGCTGGGGAAacccaaca                   >  2:6033021/1‑94 (MQ=255)
                                                                           aGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCAt               >  1:7113608/1‑94 (MQ=255)
                                                                            ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATc              <  2:7303663/94‑1 (MQ=255)
                                                                            ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATc              <  2:4268190/94‑1 (MQ=255)
                                                                             gATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCg             <  1:4211533/94‑1 (MQ=255)
                                                                              aTCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGt            <  1:1112944/94‑1 (MQ=255)
                                                                               tctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTg           <  2:5494950/94‑1 (MQ=255)
                                                                                ctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc          <  1:1277287/94‑1 (MQ=255)
                                                                                ctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc          <  1:6834731/94‑1 (MQ=255)
                                                                                  cagccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGt        >  1:390751/1‑94 (MQ=255)
                                                                                   agccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtc       <  1:6532465/94‑1 (MQ=255)
                                                                                    gccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtct      >  2:4914924/1‑94 (MQ=255)
                                                                                    gccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtct      <  2:2436008/94‑1 (MQ=255)
                                                                                    gccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtct      <  2:4801839/94‑1 (MQ=255)
                                                                                     ccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc     <  2:6275529/94‑1 (MQ=255)
                                                                                     ccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc     >  1:9143318/1‑94 (MQ=255)
                                                                                       agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACAGGCCTGCTAGGTAAACACCACACCATCGTGCGTCTCGa   >  2:7984357/1‑94 (MQ=255)
                                                                                       agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCCTCGTGCGTCTCGa   >  2:8048199/1‑94 (MQ=255)
                                                                                       agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGa   >  2:3112722/1‑94 (MQ=255)
                                                                                             |                                                                                         
GATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGAT  >  NC_000913/3253648‑3253830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 290 total aligned reads displayed.
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATT  >  NC_000913/3255501‑3255688
                                                                                             |                                                                                              
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGC                                                                                                >  SRR4302545.425911/1‑94 (MQ=60)
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGC                                                                                                <  SRR4302545.7937063/94‑1 (MQ=60)
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGC                                                                                                >  SRR4302545.7073292/1‑94 (MQ=60)
   CAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACG                                                                                            >  SRR4302545.10022935/1‑94 (MQ=60)
   CAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACG                                                                                            >  SRR4302545.7275790/1‑94 (MQ=60)
    AATGGCCATCTCGTTACTCATAATCGCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCCAGCACGA                                                                                           <  SRR4302545.3018517/94‑1 (MQ=60)
    AATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGA                                                                                           <  SRR4302545.3018518/94‑1 (MQ=60)
    AATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGA                                                                                           >  SRR4302545.8623246/1‑94 (MQ=60)
      TCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACC                                                                                         <  SRR4302545.7202206/94‑1 (MQ=60)
       CGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCC                                                                                        >  SRR4302545.10022853/1‑94 (MQ=60)
       CGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCC                                                                                        >  SRR4302545.3396590/1‑94 (MQ=60)
       CGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCC                                                                                        <  SRR4302545.8764077/94‑1 (MQ=60)
        GCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCG                                                                                       >  SRR4302545.8041374/1‑94 (MQ=60)
        GCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCG                                                                                       >  SRR4302545.1126850/1‑94 (MQ=60)
        GCCATCCCGATACTCATAATCACCCAGCCGGTGGCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCCCGACCCG                                                                                       >  SRR4302545.8041375/1‑94 (MQ=60)
        CCCATCCCGATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCG                                                                                       <  SRR4302545.1679797/94‑1 (MQ=60)
        CCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCG                                                                                       <  SRR4302545.8999436/94‑1 (MQ=60)
         CCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGC                                                                                      >  SRR4302545.10673373/1‑94 (MQ=60)
          CATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCC                                                                                     >  SRR4302545.340123/1‑94 (MQ=60)
          CATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCC                                                                                     >  SRR4302545.1765166/1‑94 (MQ=60)
           CTCCCGATACTCTAATTCACCCAGCCGGTGTCAGTACTGTCGATTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    <  SRR4302545.9682234/94‑1 (MQ=60)
           CTCCCGATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    <  SRR4302545.3245377/94‑1 (MQ=60)
           CTCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    <  SRR4302545.3902714/94‑1 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    >  SRR4302545.2470909/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    >  SRR4302545.46302/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    >  SRR4302545.6159716/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    <  SRR4302545.7285341/94‑1 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCG                                                                                    >  SRR4302545.6159715/1‑94 (MQ=60)
            tccctattcccatactccCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGG                                                                                   <  SRR4302545.547954/76‑1 (MQ=60)
              CCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGG                                                                                 >  SRR4302545.3686093/1‑94 (MQ=60)
              CCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGG                                                                                 >  SRR4302545.7846330/1‑94 (MQ=60)
               CGATACTCATAATCAGCCAGCCGGTGTCAGTACTGTCGAATTTTATCGCTTCTCGCCACTCGCTCTCATTCATTCCAGCACGACCCGCCGGagc                                                                                >  SRR4302545.10831707/1‑91 (MQ=60)
               CGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGT                                                                                >  SRR4302545.7347722/1‑94 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTC                                                                               <  SRR4302545.3159060/94‑1 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTC                                                                               <  SRR4302545.6884559/94‑1 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTC                                                                               <  SRR4302545.10017787/94‑1 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGCTC                                                                               >  SRR4302545.9352403/1‑94 (MQ=60)
                 ATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCG                                                                              <  SRR4302545.1242388/94‑1 (MQ=60)
                 ATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCG                                                                              <  SRR4302545.1242387/94‑1 (MQ=60)
                 ATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCG                                                                              <  SRR4302545.5244558/94‑1 (MQ=60)
                 ATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCG                                                                              >  SRR4302545.6748972/1‑94 (MQ=60)
                 ATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCG                                                                              >  SRR4302545.9407361/1‑94 (MQ=60)
                 ATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCG                                                                              >  SRR4302545.8343940/1‑94 (MQ=60)
                   ACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTAGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAA                                                                            >  SRR4302545.1107274/1‑94 (MQ=60)
                   ACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTCGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAA                                                                            <  SRR4302545.3357463/94‑1 (MQ=60)
                   ACTCATAACCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAA                                                                            <  SRR4302545.2966127/94‑1 (MQ=60)
                     TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGC                                                                          >  SRR4302545.8285902/1‑94 (MQ=60)
                     TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGC                                                                          <  SRR4302545.7739093/94‑1 (MQ=60)
                     TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGC                                                                          <  SRR4302545.25692/94‑1 (MQ=60)
                      CATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGcg                                                                         >  SRR4302545.9904298/1‑92 (MQ=60)
                       ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGT                                                                       >  SRR4302545.5111934/1‑94 (MQ=60)
                       ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGT                                                                       >  SRR4302545.4847850/1‑94 (MQ=60)
                       ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGT                                                                       >  SRR4302545.9851414/1‑94 (MQ=60)
                       ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGT                                                                       >  SRR4302545.4818392/1‑94 (MQ=60)
                       ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGT                                                                       <  SRR4302545.9039432/94‑1 (MQ=60)
                        TAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTC                                                                      >  SRR4302545.9151962/1‑94 (MQ=60)
                         AATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCT                                                                     >  SRR4302545.7827856/1‑94 (MQ=60)
                          ATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTG                                                                    <  SRR4302545.5371148/94‑1 (MQ=60)
                           TCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGC                                                                   >  SRR4302545.5590077/1‑94 (MQ=60)
                            CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCA                                                                  >  SRR4302545.3457274/1‑94 (MQ=60)
                            CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCA                                                                  >  SRR4302545.9521464/1‑94 (MQ=60)
                            CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCA                                                                  >  SRR4302545.8836208/1‑94 (MQ=60)
                              CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAAT                                                                <  SRR4302545.5032006/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATG                                                               <  SRR4302545.6541975/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATG                                                               <  SRR4302545.2715595/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATG                                                               >  SRR4302545.3613785/1‑94 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATG                                                               <  SRR4302545.10786164/94‑1 (MQ=60)
                               CCAGCCGGTGCCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCCCTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATG                                                               <  SRR4302545.5925366/94‑1 (MQ=60)
                                CAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGA                                                              >  SRR4302545.6082101/1‑94 (MQ=60)
                                CAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGA                                                              >  SRR4302545.3674106/1‑94 (MQ=60)
                                 cgcgGGTGTCAGTACTGTCAAATTTGATCGCTTCTCGCCACTCGCTGTCGCTCATCCCAGCACGACCCGCCGTGGTCGAAGCGTCTGCAATGAC                                                             <  SRR4302545.9901277/90‑1 (MQ=58)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGAC                                                             <  SRR4302545.7999184/94‑1 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGGCGAAGCGTCTGCAATGAC                                                             >  SRR4302545.10673189/1‑94 (MQ=60)
                                  GCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACG                                                            <  SRR4302545.6446084/94‑1 (MQ=60)
                                  GCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACG                                                            <  SRR4302545.6894558/94‑1 (MQ=60)
                                    CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGGAGCGTCTGCAATGACGCC                                                          <  SRR4302545.10885134/94‑1 (MQ=60)
                                    CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCC                                                          <  SRR4302545.3359216/94‑1 (MQ=60)
                                    CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCC                                                          <  SRR4302545.2836096/94‑1 (MQ=60)
                                    CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCCGCAATGACGGC                                                          >  SRR4302545.4596023/1‑94 (MQ=60)
                                     GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCT                                                         >  SRR4302545.9836738/1‑94 (MQ=60)
                                     GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCT                                                         >  SRR4302545.7360801/1‑94 (MQ=60)
                                     GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCT                                                         >  SRR4302545.7869790/1‑94 (MQ=60)
                                      GTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTT                                                        <  SRR4302545.5746419/94‑1 (MQ=60)
                                       TGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTT                                                       >  SRR4302545.497529/1‑94 (MQ=60)
                                         TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTAT                                                     >  SRR4302545.1550317/1‑94 (MQ=60)
                                         TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTAT                                                     <  SRR4302545.247543/94‑1 (MQ=60)
                                         TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTAT                                                     <  SRR4302545.4454399/94‑1 (MQ=60)
                                         TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTAT                                                     >  SRR4302545.98106/1‑94 (MQ=60)
                                          CAGTACTGTCGAATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATT                                                    <  SRR4302545.9085663/94‑1 (MQ=60)
                                          CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATT                                                    >  SRR4302545.3719306/1‑94 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTC                                                   <  SRR4302545.1373763/94‑1 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTC                                                   <  SRR4302545.7567145/94‑1 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTC                                                   <  SRR4302545.8319852/94‑1 (MQ=60)
                                            GTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCG                                                  <  SRR4302545.7291869/94‑1 (MQ=60)
                                            GTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCG                                                  >  SRR4302545.4085406/1‑94 (MQ=60)
                                             TACTGTTGAATTTGTTCGCTTCTCGCCACTCTCTCTCCCTCATTTCAGCACGCCCCGCCGGGGTCGAAGCCTCTGCAATGACGCCTTTATTCGA                                                 <  SRR4302545.7189700/94‑1 (MQ=43)
                                             TACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGA                                                 <  SRR4302545.5491765/94‑1 (MQ=60)
                                             TACGGTGGAATTTGATCCCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGA                                                 <  SRR4302545.7929010/94‑1 (MQ=60)
                                              ACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGAT                                                <  SRR4302545.8006912/94‑1 (MQ=60)
                                              ACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCCGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGAT                                                >  SRR4302545.2110412/1‑94 (MQ=60)
                                               CTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATG                                               <  SRR4302545.4036876/94‑1 (MQ=60)
                                               CTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATG                                               <  SRR4302545.1622798/94‑1 (MQ=60)
                                                TGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGC                                              <  SRR4302545.9960098/94‑1 (MQ=60)
                                                TGTCCAATTTGACCGCTTCTCGCCCCTCGCTCTCACTCATTCCAGCACGCCCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGC                                              <  SRR4302545.8150537/94‑1 (MQ=60)
                                                 GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCA                                             >  SRR4302545.7101795/1‑94 (MQ=60)
                                                 GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCA                                             >  SRR4302545.8437312/1‑94 (MQ=60)
                                                  TCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAA                                            <  SRR4302545.2674287/94‑1 (MQ=60)
                                                  TCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAA                                            >  SRR4302545.4469809/1‑94 (MQ=60)
                                                   CGAATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAAT                                           <  SRR4302545.10197071/94‑1 (MQ=60)
                                                     AATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                         >  SRR4302545.3264452/1‑94 (MQ=60)
                                                     AATTTGACCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                         <  SRR4302545.10841714/94‑1 (MQ=60)
                                                      ATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTC                                        >  SRR4302545.374128/1‑94 (MQ=60)
                                                        TTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGATGCCTTTATTCGATGCAATTTCCA                                      >  SRR4302545.7805124/1‑94 (MQ=60)
                                                         TGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCAT                                     <  SRR4302545.3679164/94‑1 (MQ=60)
                                                         TGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCAT                                     >  SRR4302545.3248552/1‑94 (MQ=60)
                                                           ATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                   >  SRR4302545.1698527/1‑94 (MQ=60)
                                                           ATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                   >  SRR4302545.5835191/1‑94 (MQ=60)
                                                           ATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                   >  SRR4302545.6218800/1‑94 (MQ=60)
                                                            TCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAT                                  <  SRR4302545.5372614/94‑1 (MQ=60)
                                                            TCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAT                                  >  SRR4302545.1061896/1‑94 (MQ=60)
                                                             CGCTTCTCGCCACTCGCTCTCCCTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                                 <  SRR4302545.4089576/94‑1 (MQ=60)
                                                             CGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                                 >  SRR4302545.3205273/1‑94 (MQ=60)
                                                              CCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGCCCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTT                                <  SRR4302545.6770596/94‑1 (MQ=60)
                                                               CTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                               >  SRR4302545.6403378/1‑94 (MQ=60)
                                                               CTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                               >  SRR4302545.2592649/1‑94 (MQ=60)
                                                               CTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                               >  SRR4302545.8177358/1‑94 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                              <  SRR4302545.2133761/94‑1 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                              <  SRR4302545.1920191/94‑1 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                              <  SRR4302545.2590346/94‑1 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                              <  SRR4302545.4888103/94‑1 (MQ=60)
                                                                TCCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                              <  SRR4302545.5903594/94‑1 (MQ=60)
                                                                 TCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTC                             <  SRR4302545.9560193/94‑1 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                            >  SRR4302545.7575284/1‑94 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                            <  SRR4302545.7206740/94‑1 (MQ=60)
                                                                   TCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGC                           >  SRR4302545.6165449/1‑94 (MQ=60)
                                                                   TCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGC                           >  SRR4302545.3567481/1‑94 (MQ=60)
                                                                    TGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                          >  SRR4302545.2319432/1‑94 (MQ=60)
                                                                    CGCTACTCACTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                          <  SRR4302545.4840980/94‑1 (MQ=60)
                                                                    CGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                          >  SRR4302545.1495344/1‑94 (MQ=60)
                                                                    CGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                          >  SRR4302545.4699622/1‑94 (MQ=60)
                                                                     GCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGCTGCAATTTCCATAATTTCTCGCTC                         >  SRR4302545.2981052/1‑94 (MQ=60)
                                                                     GCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTC                         >  SRR4302545.1034581/1‑94 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                        >  SRR4302545.10569840/1‑94 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                        <  SRR4302545.8317774/94‑1 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                        >  SRR4302545.10569841/1‑94 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                        >  SRR4302545.8785892/1‑94 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                        >  SRR4302545.8810101/1‑94 (MQ=60)
                                                                        CCTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                      <  SRR4302545.7402107/94‑1 (MQ=60)
                                                                        ACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                      >  SRR4302545.2546697/1‑94 (MQ=60)
                                                                        ACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                      <  SRR4302545.851368/94‑1 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCAGCTCGCCCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                     <  SRR4302545.2352620/94‑1 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                     >  SRR4302545.5305826/1‑94 (MQ=60)
                                                                          TCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAT                    <  SRR4302545.6285031/94‑1 (MQ=60)
                                                                           CGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATT                   <  SRR4302545.6895666/94‑1 (MQ=60)
                                                                            GCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTT                  <  SRR4302545.1490874/94‑1 (MQ=60)
                                                                            GCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTT                  >  SRR4302545.10094410/1‑94 (MQ=60)
                                                                             CTCTCACTCATTCCAGCACGGCCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                 <  SRR4302545.9613560/94‑1 (MQ=60)
                                                                             CTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                 >  SRR4302545.3663773/1‑94 (MQ=60)
                                                                             CTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                 <  SRR4302545.979821/94‑1 (MQ=60)
                                                                              TCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                >  SRR4302545.90060/1‑94 (MQ=60)
                                                                              TCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                >  SRR4302545.9600300/1‑94 (MQ=60)
                                                                              TCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                <  SRR4302545.2245073/94‑1 (MQ=60)
                                                                              TCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                >  SRR4302545.4570767/1‑94 (MQ=60)
                                                                               ttcttTCATTCCAGCACGACCCGCCGGAGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT               <  SRR4302545.10094257/89‑1 (MQ=60)
                                                                               CTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT               <  SRR4302545.9967737/94‑1 (MQ=60)
                                                                               CTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT               >  SRR4302545.5931998/1‑94 (MQ=60)
                                                                               CTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT               >  SRR4302545.235015/1‑94 (MQ=60)
                                                                               CTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT               >  SRR4302545.2913822/1‑94 (MQ=60)
                                                                                TCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTA              <  SRR4302545.8387445/94‑1 (MQ=60)
                                                                                TCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTA              <  SRR4302545.6628377/94‑1 (MQ=60)
                                                                                TCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTA              >  SRR4302545.10837799/1‑94 (MQ=60)
                                                                                 CACTCATTCCAGCCCGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG             <  SRR4302545.7838344/94‑1 (MQ=60)
                                                                                 CACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG             >  SRR4302545.529394/1‑94 (MQ=60)
                                                                                 CACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG             <  SRR4302545.2740781/94‑1 (MQ=60)
                                                                                 CACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG             <  SRR4302545.7656567/94‑1 (MQ=60)
                                                                                 CACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG             >  SRR4302545.3483117/1‑94 (MQ=60)
                                                                                 CACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG             <  SRR4302545.6224784/94‑1 (MQ=60)
                                                                                  ACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG            <  SRR4302545.6930448/94‑1 (MQ=60)
                                                                                  ACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG            <  SRR4302545.6984917/94‑1 (MQ=60)
                                                                                  ACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG            <  SRR4302545.5716141/94‑1 (MQ=60)
                                                                                  ACTCATTCCAGCACGACACGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG            >  SRR4302545.10337601/1‑94 (MQ=60)
                                                                                   CTCATTCCAGCGCGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTCTTCGATGCAATTTCCATAATTTCTCGCTCCATATTTTGTAGGG           <  SRR4302545.8307807/94‑1 (MQ=60)
                                                                                    TCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGC          >  SRR4302545.109862/1‑94 (MQ=60)
                                                                                      ATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT        >  SRR4302545.3619992/1‑94 (MQ=60)
                                                                                      ATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT        <  SRR4302545.6455940/94‑1 (MQ=60)
                                                                                       TTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA       >  SRR4302545.143665/1‑94 (MQ=60)
                                                                                       TTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA       >  SRR4302545.5886568/1‑94 (MQ=60)
                                                                                       TTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA       <  SRR4302545.1706009/94‑1 (MQ=60)
                                                                                        TCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTAT      >  SRR4302545.7623285/1‑94 (MQ=60)
                                                                                         CCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT     >  SRR4302545.7671219/1‑94 (MQ=60)
                                                                                         CCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT     >  SRR4302545.5473629/1‑94 (MQ=60)
                                                                                         CCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT     >  SRR4302545.10220192/1‑94 (MQ=60)
                                                                                         CCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT     >  SRR4302545.5473628/1‑94 (MQ=60)
                                                                                           caGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTA    <  SRR4302545.6550324/92‑1 (MQ=60)
                                                                                            AGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT   <  SRR4302545.7760186/94‑1 (MQ=60)
                                                                                            AGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT   >  SRR4302545.6609459/1‑94 (MQ=60)
                                                                                            AGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT   <  SRR4302545.7103854/94‑1 (MQ=60)
                                                                                            AGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT   >  SRR4302545.2297560/1‑94 (MQ=60)
                                                                                            AGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT   <  SRR4302545.7416974/94‑1 (MQ=60)
                                                                                             GCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTCCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATT  <  SRR4302545.10859222/94‑1 (MQ=60)
                                                                                             |                                                                                              
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATT  >  NC_000913/3255501‑3255688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: