Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,257,838 +G coding (2222/2241 nt) tdcE ← putative formate acetyltransferase 3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,257,8371.G99.6% 1715.5 / ‑2.2 492coding (2223/2241 nt)tdcEputative formate acetyltransferase 3
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base G (264/226);  total (265/227)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

Only 100 of 530 total aligned reads displayed.

CTTTTTCATACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑C‑GCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCATTACGTTGA  >  NC_000913/3257744‑3257925
                                                                                               |                                                                                        
   tttCATACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑c‑ggc                                                                                       <  2:2209059/94‑3 (MQ=255)
    ttCATACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑c‑ggcg                                                                                      >  1:2643169/1‑91 (MQ=255)
     tCATACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑c‑ggcgt                                                                                     <  1:3252688/94‑5 (MQ=255)
        tACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGc                                                                                   >  2:10469391/1‑94 (MQ=255)
        tACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGc                                                                                   >  1:357762/1‑94 (MQ=255)
         aCATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGcc                                                                                  >  2:4845129/1‑94 (MQ=255)
         aCATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGcc                                                                                  <  2:4594450/94‑1 (MQ=255)
          cATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCa                                                                                 <  2:6137470/94‑1 (MQ=255)
           aTCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCag                                                                                <  1:4627052/94‑1 (MQ=255)
           aTCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCag                                                                                >  1:9636856/1‑94 (MQ=255)
           aTCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCag                                                                                <  2:8578427/94‑1 (MQ=255)
              ctccGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAgaga                                                                             >  1:4117140/1‑94 (MQ=255)
               tccGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGac                                                                            <  1:5709818/94‑1 (MQ=255)
                ccGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGaca                                                                           <  2:6547135/94‑1 (MQ=255)
                  ggCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAATCGCA‑CGGCGTAGCCAGAGACACg                                                                         >  1:5872700/1‑94 (MQ=255)
                  ggCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACg                                                                         <  1:2368800/94‑1 (MQ=255)
                  ggCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACg                                                                         >  1:2997995/1‑94 (MQ=255)
                  ggCGTCAGAGCGCCTAGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACg                                                                         >  1:5488961/1‑94 (MQ=255)
                    cGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGa                                                                       <  2:4495389/94‑1 (MQ=255)
                    cGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGa                                                                       <  1:2169703/94‑1 (MQ=255)
                    cGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGa                                                                       >  1:8128355/1‑94 (MQ=255)
                     gTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGAt                                                                      >  2:8330314/1‑94 (MQ=255)
                     gTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGAt                                                                      >  2:5384308/1‑94 (MQ=255)
                      tCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGAtt                                                                     <  2:5085093/94‑1 (MQ=255)
                      gcAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGAtt                                                                     <  2:1457361/93‑1 (MQ=255)
                       cAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTg                                                                    >  1:3939465/1‑94 (MQ=255)
                       cAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTg                                                                    <  1:3093601/94‑1 (MQ=255)
                        agagCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGt                                                                   >  1:7397144/1‑94 (MQ=255)
                             gcCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGt                                                              <  2:5975274/94‑1 (MQ=255)
                             gcCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGt                                                              <  2:8828040/94‑1 (MQ=255)
                             gcCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGt                                                              <  1:7119659/94‑1 (MQ=255)
                              ccTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGtt                                                             >  2:3919814/1‑94 (MQ=255)
                              ccTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGtt                                                             <  1:6343258/94‑1 (MQ=255)
                               cTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTa                                                            <  2:2927900/94‑1 (MQ=255)
                               cTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTa                                                            <  1:8369791/94‑1 (MQ=255)
                               cTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTa                                                            >  1:7744255/1‑94 (MQ=255)
                                tGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAg                                                           <  1:2485746/94‑1 (MQ=255)
                                tGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAg                                                           <  1:9117303/94‑1 (MQ=255)
                                ggggTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAg                                                           <  2:2411140/93‑1 (MQ=255)
                                 gggTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAgg                                                          >  2:2535755/1‑94 (MQ=255)
                                 gggTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAgg                                                          >  1:1333310/1‑94 (MQ=255)
                                  ggTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTAAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGa                                                         >  2:10003253/1‑94 (MQ=255)
                                   gTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGat                                                        <  1:8837172/94‑1 (MQ=255)
                                     aaaGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGatat                                                      <  1:9747528/94‑1 (MQ=255)
                                       aGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATAttt                                                    <  2:9572442/94‑1 (MQ=255)
                                       aGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATAttt                                                    >  2:1968484/1‑94 (MQ=255)
                                        ggTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATAtttt                                                   <  2:8188704/94‑1 (MQ=255)
                                        ggTACGTGAAATAACATACTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATAtttt                                                   <  2:6959102/94‑1 (MQ=255)
                                         gTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATAttttt                                                  >  1:1094178/1‑94 (MQ=255)
                                          tACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTc                                                 >  2:1517165/1‑94 (MQ=255)
                                           aCGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTcc                                                >  2:7933670/1‑94 (MQ=255)
                                            cGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCg                                               <  2:2250358/94‑1 (MQ=255)
                                            cGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCg                                               <  1:10291123/94‑1 (MQ=255)
                                             gTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCgg                                              <  2:5604460/94‑1 (MQ=255)
                                              tGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCggg                                             <  1:5280225/94‑1 (MQ=255)
                                              tGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCggg                                             >  1:9487953/1‑94 (MQ=255)
                                              tGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCggg                                             <  1:10522092/94‑1 (MQ=255)
                                               gAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGt                                            <  2:9197251/94‑1 (MQ=255)
                                               gAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGt                                            <  2:3793827/94‑1 (MQ=255)
                                                aaaTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTg                                           >  2:1644020/1‑94 (MQ=255)
                                                aaaTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTg                                           >  2:4255490/1‑94 (MQ=255)
                                                aaaTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTg                                           >  1:6092087/1‑94 (MQ=255)
                                                 aaTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGc                                          <  1:10033917/94‑1 (MQ=255)
                                                  aTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCt                                         >  2:2730568/1‑94 (MQ=255)
                                                  aTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCt                                         <  1:6839717/94‑1 (MQ=255)
                                                  aTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCt                                         <  1:7593260/94‑1 (MQ=255)
                                                  aTAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCt                                         >  1:5356789/1‑94 (MQ=255)
                                                    aaCATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCg                                       <  1:371500/94‑1 (MQ=255)
                                                     aCATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGa                                      >  2:9252995/1‑94 (MQ=255)
                                                       aTCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATg                                    <  1:1959908/94‑1 (MQ=255)
                                                       aTCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATg                                    <  2:7786393/94‑1 (MQ=255)
                                                       aTCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATg                                    <  2:9448714/94‑1 (MQ=255)
                                                         ccTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGc                                  >  2:3072104/1‑94 (MQ=255)
                                                          cTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGct                                 >  1:6210827/1‑93 (MQ=255)
                                                              tGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCca                             >  1:1514148/1‑94 (MQ=255)
                                                               gcggTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcag                            <  2:6677707/91‑1 (MQ=255)
                                                               gCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcag                            <  1:4992969/94‑1 (MQ=255)
                                                                cTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcagc                           >  2:1278483/1‑94 (MQ=255)
                                                                cTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcagc                           <  2:10108812/94‑1 (MQ=255)
                                                                cTGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcagc                           >  1:803305/1‑94 (MQ=255)
                                                                 tGTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcagca                          >  2:6244571/1‑94 (MQ=255)
                                                                  gTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcagcag                         <  1:492706/94‑1 (MQ=255)
                                                                  gTTCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCcagcag                         >  2:7413629/1‑94 (MQ=255)
                                                                   ttCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCagcagc                        <  2:3477801/94‑1 (MQ=255)
                                                                    tCACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAgcagca                       >  2:754793/1‑94 (MQ=255)
                                                                     cACGGGTCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCAt                      >  1:1776754/1‑94 (MQ=255)
                                                                           tcggTGCGTTTAAGCGCA‑CGGCGTAGCCAGAGGCACTGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCg                <  1:3480484/91‑1 (MQ=37)
                                                                           tCAGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCg                <  1:4286452/94‑1 (MQ=255)
                                                                             aGTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGAt              >  2:9066970/1‑94 (MQ=255)
                                                                              gTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGAtt             >  1:2060321/1‑94 (MQ=255)
                                                                              gTGCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGAtt             >  2:201922/1‑94 (MQ=255)
                                                                                gCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCa           <  1:2786203/94‑1 (MQ=255)
                                                                                gCGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCa           >  2:5515856/1‑94 (MQ=255)
                                                                                 cGTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTACGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCAt          >  2:4944718/1‑94 (MQ=255)
                                                                                  gTTGAAGCGCAGG‑GCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCAtt         >  1:8670818/1‑94 (MQ=255)
                                                                                  gTTGAAGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCAtt         >  1:655880/1‑94 (MQ=255)
                                                                                      aaGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCATTacgt     <  2:4658509/94‑1 (MQ=255)
                                                                                      aaGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCATTacgt     <  1:9841141/94‑1 (MQ=255)
                                                                                       aGCGCA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCATTacgtt    >  1:5409223/1‑94 (MQ=255)
                                                                                         cgcA‑CGGCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCATTacgttga  >  2:585906/1‑94 (MQ=255)
                                                                                               |                                                                                        
CTTTTTCATACATCCTCCGGCGTCAGAGCGCCTGGGTAAAGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCA‑C‑GCGTAGCCAGAGACACGGATTGTCAGGTTAGGATATTTTTCCGGGTGCTCGATGGCATCCAGCAGCATTTCCCGATTCATTACGTTGA  >  NC_000913/3257744‑3257925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 277 total aligned reads displayed.
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCAA  >  NC_000913/3265348‑3265534
                                                                                             |                                                                                             
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC                                                                                               >  SRR4302545.2538160/1‑94 (MQ=60)
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC                                                                                               <  SRR4302545.8343026/94‑1 (MQ=60)
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC                                                                                               <  SRR4302545.3855303/94‑1 (MQ=60)
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC                                                                                               >  SRR4302545.7610271/1‑94 (MQ=60)
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC                                                                                               <  SRR4302545.953217/94‑1 (MQ=60)
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGGAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC                                                                                               >  SRR4302545.9712985/1‑94 (MQ=60)
 ACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCG                                                                                              <  SRR4302545.1003871/94‑1 (MQ=60)
 ACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCG                                                                                              >  SRR4302545.9856301/1‑94 (MQ=60)
 ACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCG                                                                                              >  SRR4302545.9386206/1‑94 (MQ=60)
 ACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCG                                                                                              >  SRR4302545.4671817/1‑94 (MQ=60)
  CAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGC                                                                                             <  SRR4302545.2756877/94‑1 (MQ=60)
   AGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCG                                                                                            >  SRR4302545.10010940/1‑94 (MQ=60)
   AGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCG                                                                                            <  SRR4302545.10684949/94‑1 (MQ=60)
   AGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCG                                                                                            >  SRR4302545.3696729/1‑94 (MQ=60)
     AGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAG                                                                                          <  SRR4302545.6017051/94‑1 (MQ=60)
     AGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAG                                                                                          <  SRR4302545.3362416/94‑1 (MQ=60)
     AGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAG                                                                                          >  SRR4302545.10233054/1‑94 (MQ=60)
     AGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAG                                                                                          >  SRR4302545.6822826/1‑94 (MQ=60)
       CTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGA                                                                                        >  SRR4302545.2913103/1‑94 (MQ=60)
       CTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGA                                                                                        <  SRR4302545.1013038/94‑1 (MQ=60)
       CTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGA                                                                                        <  SRR4302545.9161549/94‑1 (MQ=60)
        TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA                                                                                       >  SRR4302545.6307824/1‑94 (MQ=60)
        TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA                                                                                       >  SRR4302545.8452777/1‑94 (MQ=60)
        TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA                                                                                       <  SRR4302545.2971945/94‑1 (MQ=60)
        TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA                                                                                       <  SRR4302545.5565261/94‑1 (MQ=60)
        TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA                                                                                       <  SRR4302545.7804758/94‑1 (MQ=60)
         TTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAA                                                                                      >  SRR4302545.10283687/1‑94 (MQ=60)
         TTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAA                                                                                      <  SRR4302545.5157227/94‑1 (MQ=60)
         TTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAA                                                                                      >  SRR4302545.5101848/1‑94 (MQ=60)
           TGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAAT                                                                                    >  SRR4302545.6380689/1‑94 (MQ=60)
            GATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATA                                                                                   >  SRR4302545.679027/1‑94 (MQ=60)
             ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA                                                                                  <  SRR4302545.3082664/94‑1 (MQ=60)
             ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA                                                                                  >  SRR4302545.2880314/1‑94 (MQ=60)
             ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA                                                                                  <  SRR4302545.5655816/94‑1 (MQ=60)
             ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA                                                                                  <  SRR4302545.3726603/94‑1 (MQ=60)
              TCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAG                                                                                 <  SRR4302545.2820203/94‑1 (MQ=60)
              TCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAG                                                                                 <  SRR4302545.4204795/94‑1 (MQ=60)
               CGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGC                                                                                <  SRR4302545.8118586/94‑1 (MQ=60)
               CGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGC                                                                                <  SRR4302545.11309/94‑1 (MQ=60)
               CGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGC                                                                                >  SRR4302545.3452681/1‑94 (MQ=60)
                GGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATGAGCA                                                                               >  SRR4302545.73061/1‑94 (MQ=60)
                GGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCA                                                                               >  SRR4302545.73062/1‑94 (MQ=60)
                GGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCA                                                                               >  SRR4302545.3026981/1‑94 (MQ=60)
                 GCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCAT                                                                              <  SRR4302545.3720449/94‑1 (MQ=60)
                  CGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATC                                                                             <  SRR4302545.7490704/94‑1 (MQ=60)
                   GTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCT                                                                            <  SRR4302545.7381640/94‑1 (MQ=60)
                   GTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCT                                                                            >  SRR4302545.2251132/1‑94 (MQ=60)
                   GTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCT                                                                            >  SRR4302545.5287616/1‑94 (MQ=60)
                     AGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTAT                                                                          >  SRR4302545.4066666/1‑94 (MQ=60)
                     AGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTAT                                                                          <  SRR4302545.10533865/94‑1 (MQ=60)
                      GGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATT                                                                         <  SRR4302545.8315518/94‑1 (MQ=60)
                      GGCCACAGAATGTGTCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAGCCCCGCGAGGAAAATAAGCATCTATT                                                                         <  SRR4302545.8315519/94‑1 (MQ=60)
                       GCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTA                                                                        <  SRR4302545.3920225/94‑1 (MQ=60)
                       GCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTCCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTA                                                                        <  SRR4302545.8988659/94‑1 (MQ=60)
                        CCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAT                                                                       >  SRR4302545.4972116/1‑94 (MQ=60)
                        CCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAT                                                                       >  SRR4302545.5278875/1‑94 (MQ=60)
                        CCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAT                                                                       <  SRR4302545.6607701/94‑1 (MQ=60)
                         CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT                                                                      >  SRR4302545.2557285/1‑94 (MQ=60)
                         CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT                                                                      >  SRR4302545.7467745/1‑94 (MQ=60)
                         CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT                                                                      <  SRR4302545.712820/94‑1 (MQ=60)
                         CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT                                                                      <  SRR4302545.6860959/94‑1 (MQ=60)
                          CCAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTG                                                                     <  SRR4302545.2349795/94‑1 (MQ=60)
                          ACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAGAATAAGCATCTATTATTG                                                                     <  SRR4302545.8407128/94‑1 (MQ=60)
                          ACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTG                                                                     <  SRR4302545.8407398/94‑1 (MQ=60)
                          ACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTG                                                                     <  SRR4302545.392572/94‑1 (MQ=60)
                           CAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGT                                                                    <  SRR4302545.4795603/94‑1 (MQ=60)
                            AGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTT                                                                   >  SRR4302545.3791364/1‑94 (MQ=60)
                              AATGTTGCTTCGTTTACTGTAACTCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTG                                                                 <  SRR4302545.5964601/94‑1 (MQ=60)
                              AATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTG                                                                 <  SRR4302545.2775153/94‑1 (MQ=60)
                              AATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTG                                                                 <  SRR4302545.8065889/94‑1 (MQ=60)
                               ATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGT                                                                <  SRR4302545.7800992/94‑1 (MQ=60)
                               ATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGT                                                                >  SRR4302545.7405774/1‑94 (MQ=60)
                               ATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGT                                                                >  SRR4302545.4241432/1‑94 (MQ=60)
                                TGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTC                                                               >  SRR4302545.1063562/1‑94 (MQ=60)
                                 GTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCA                                                              >  SRR4302545.5358362/1‑94 (MQ=60)
                                 GTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCA                                                              >  SRR4302545.5411887/1‑94 (MQ=60)
                                 GTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCA                                                              >  SRR4302545.561840/1‑94 (MQ=60)
                                 GTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCA                                                              <  SRR4302545.5600174/94‑1 (MQ=60)
                                 GTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCA                                                              >  SRR4302545.6524455/1‑94 (MQ=60)
                                 GTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCA                                                              <  SRR4302545.8666116/94‑1 (MQ=60)
                                  TTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCAT                                                             <  SRR4302545.1805662/94‑1 (MQ=60)
                                   TGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATG                                                            <  SRR4302545.7187707/94‑1 (MQ=60)
                                   TGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATG                                                            >  SRR4302545.1653276/1‑94 (MQ=60)
                                   TGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATG                                                            <  SRR4302545.4854938/94‑1 (MQ=60)
                                    GCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGA                                                           >  SRR4302545.9097239/1‑94 (MQ=60)
                                    GCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGA                                                           <  SRR4302545.2579934/94‑1 (MQ=60)
                                    GCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGAGAGGAAAATAAGCATCTATTATTGTTTGTCATGA                                                           <  SRR4302545.9710103/94‑1 (MQ=60)
                                     CTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGAT                                                          >  SRR4302545.10215824/1‑94 (MQ=60)
                                     CTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGAT                                                          <  SRR4302545.9263720/94‑1 (MQ=60)
                                      TTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATG                                                         <  SRR4302545.10685042/94‑1 (MQ=60)
                                      TTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATG                                                         <  SRR4302545.4882460/94‑1 (MQ=60)
                                        CGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGAC                                                       <  SRR4302545.4151898/94‑1 (MQ=60)
                                        CGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGAC                                                       >  SRR4302545.6332383/1‑94 (MQ=60)
                                         GTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA                                                      >  SRR4302545.3077043/1‑94 (MQ=60)
                                         GTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA                                                      >  SRR4302545.4890315/1‑94 (MQ=60)
                                         GTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA                                                      >  SRR4302545.8325296/1‑94 (MQ=60)
                                         GTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA                                                      >  SRR4302545.2111194/1‑94 (MQ=60)
                                         GTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA                                                      >  SRR4302545.4615382/1‑94 (MQ=60)
                                          TTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAA                                                     <  SRR4302545.4736542/94‑1 (MQ=60)
                                            TACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGG                                                   <  SRR4302545.8875381/94‑1 (MQ=60)
                                            TACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGG                                                   <  SRR4302545.1143901/94‑1 (MQ=60)
                                            TACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGG                                                   <  SRR4302545.5146360/94‑1 (MQ=60)
                                            TACGGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGG                                                   <  SRR4302545.1143900/94‑1 (MQ=60)
                                             ACTGTAACGCCGGGTAAATGAGCGTTTTGTGATAGTGCGAAAGACCCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATTATGACAAGGC                                                  <  SRR4302545.6194206/94‑1 (MQ=60)
                                              CTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCA                                                 <  SRR4302545.6744749/94‑1 (MQ=60)
                                              CTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCA                                                 <  SRR4302545.4171227/94‑1 (MQ=60)
                                               TGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAG                                                >  SRR4302545.3406787/1‑94 (MQ=60)
                                               TGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAG                                                <  SRR4302545.3391332/94‑1 (MQ=60)
                                                GTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGG                                               >  SRR4302545.3546273/1‑94 (MQ=60)
                                                  AACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCA                                             >  SRR4302545.451762/1‑94 (MQ=60)
                                                   ACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCAT                                            <  SRR4302545.7438707/94‑1 (MQ=60)
                                                   ACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCAT                                            <  SRR4302545.3934343/94‑1 (MQ=60)
                                                   ACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCAT                                            <  SRR4302545.9294652/94‑1 (MQ=60)
                                                   ACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCAT                                            >  SRR4302545.7942091/1‑94 (MQ=60)
                                                    CGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATC                                           <  SRR4302545.5888023/94‑1 (MQ=60)
                                                    CGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATC                                           >  SRR4302545.8927162/1‑94 (MQ=60)
                                                    CGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATA                                           >  SRR4302545.6834954/1‑94 (MQ=60)
                                                    CGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATA                                           >  SRR4302545.6456950/1‑94 (MQ=60)
                                                    CGCCGGGTAAATGAGCGGTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATC                                           >  SRR4302545.6131658/1‑94 (MQ=60)
                                                     GCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCA                                          <  SRR4302545.5681534/94‑1 (MQ=60)
                                                     GCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCA                                          >  SRR4302545.9448910/1‑94 (MQ=60)
                                                     GCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCA                                          <  SRR4302545.5774330/94‑1 (MQ=60)
                                                       CGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAT                                        >  SRR4302545.6982934/1‑94 (MQ=60)
                                                       CGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAT                                        >  SRR4302545.10027546/1‑94 (MQ=60)
                                                       CGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAT                                        >  SRR4302545.6524680/1‑94 (MQ=60)
                                                        GGGTAAATGATCTTTTTTTGATAGGGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG                                       <  SRR4302545.2386455/94‑1 (MQ=60)
                                                        GGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGTGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG                                       >  SRR4302545.694670/1‑94 (MQ=60)
                                                        GGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGTATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG                                       <  SRR4302545.3056493/94‑1 (MQ=60)
                                                        GGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG                                       <  SRR4302545.5345825/94‑1 (MQ=60)
                                                          GTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAA                                     >  SRR4302545.1566611/1‑94 (MQ=60)
                                                           TAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAA                                    >  SRR4302545.8565536/1‑94 (MQ=60)
                                                           TAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAA                                    >  SRR4302545.1305956/1‑94 (MQ=60)
                                                            AAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAG                                   <  SRR4302545.8106549/94‑1 (MQ=60)
                                                            AAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAG                                   >  SRR4302545.9549568/1‑94 (MQ=60)
                                                             AATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGG                                  <  SRR4302545.2063893/94‑1 (MQ=60)
                                                              ATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGC                                 <  SRR4302545.5877553/94‑1 (MQ=60)
                                                              ATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGC                                 >  SRR4302545.7767100/1‑94 (MQ=60)
                                                               TGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCT                                <  SRR4302545.4321604/94‑1 (MQ=60)
                                                               TGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCT                                >  SRR4302545.2464570/1‑94 (MQ=60)
                                                               TGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCT                                <  SRR4302545.8819744/94‑1 (MQ=60)
                                                               TGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCT                                >  SRR4302545.10819109/1‑94 (MQ=60)
                                                                TAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTT                               <  SRR4302545.2447097/94‑1 (MQ=60)
                                                                TAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTT                               <  SRR4302545.7559387/94‑1 (MQ=60)
                                                                GAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTT                               >  SRR4302545.7107238/1‑94 (MQ=60)
                                                                 AGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTC                              <  SRR4302545.8272075/94‑1 (MQ=60)
                                                                 AGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTC                              >  SRR4302545.595993/1‑94 (MQ=60)
                                                                  GCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCC                             <  SRR4302545.2166237/94‑1 (MQ=60)
                                                                   CGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCC                            >  SRR4302545.10517555/1‑94 (MQ=60)
                                                                    GTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCA                           >  SRR4302545.4727774/1‑94 (MQ=60)
                                                                    GTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCA                           <  SRR4302545.8000093/94‑1 (MQ=60)
                                                                    GTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCA                           >  SRR4302545.6170970/1‑94 (MQ=60)
                                                                    GTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCA                           >  SRR4302545.8930847/1‑94 (MQ=60)
                                                                    GTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCCTCCCA                           >  SRR4302545.9618211/1‑94 (MQ=60)
                                                                      TTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT                         >  SRR4302545.3884801/1‑94 (MQ=60)
                                                                      TTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT                         >  SRR4302545.7192293/1‑94 (MQ=60)
                                                                       TTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATT                        >  SRR4302545.5498371/1‑94 (MQ=60)
                                                                       TTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATT                        <  SRR4302545.843458/94‑1 (MQ=60)
                                                                        gatctTAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCaataatagat                       <  SRR4302545.2578854/89‑11 (MQ=60)
                                                                        TTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAATGCAGGCATCAATGAAAGGCTTCCAAATTG                       <  SRR4302545.10782642/94‑1 (MQ=60)
                                                                        TTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTG                       <  SRR4302545.8222458/94‑1 (MQ=60)
                                                                        TTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTG                       >  SRR4302545.9909113/1‑94 (MQ=60)
                                                                        TTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTG                       >  SRR4302545.6578437/1‑94 (MQ=60)
                                                                        TTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTA                       <  SRR4302545.7636375/94‑1 (MQ=60)
                                                                          TGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCG                     <  SRR4302545.8994998/94‑1 (MQ=60)
                                                                          TGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCG                     >  SRR4302545.980145/1‑94 (MQ=60)
                                                                           GATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGC                    <  SRR4302545.1980527/94‑1 (MQ=60)
                                                                           GATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGC                    >  SRR4302545.6443505/1‑94 (MQ=60)
                                                                            ATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCA                   >  SRR4302545.4765545/1‑94 (MQ=60)
                                                                             TAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCAT                  <  SRR4302545.9886902/94‑1 (MQ=60)
                                                                             TAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCAT                  <  SRR4302545.9846701/94‑1 (MQ=60)
                                                                             TAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCAT                  >  SRR4302545.3837695/1‑94 (MQ=60)
                                                                             TAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCAT                  <  SRR4302545.7464635/94‑1 (MQ=60)
                                                                               GTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATAT                >  SRR4302545.3262963/1‑94 (MQ=60)
                                                                               GTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATAT                <  SRR4302545.2321476/94‑1 (MQ=60)
                                                                               GTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATAT                <  SRR4302545.6946739/94‑1 (MQ=60)
                                                                                TGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATT               <  SRR4302545.2245037/94‑1 (MQ=60)
                                                                                 GCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTT              <  SRR4302545.3131989/94‑1 (MQ=60)
                                                                                  CGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTT             >  SRR4302545.5507585/1‑94 (MQ=60)
                                                                                   GACAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCATTTGCGCATATTTTT            >  SRR4302545.3111886/1‑94 (MQ=60)
                                                                                   GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTT            <  SRR4302545.8897980/94‑1 (MQ=60)
                                                                                   GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTT            >  SRR4302545.2185853/1‑94 (MQ=60)
                                                                                   GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTT            >  SRR4302545.3033128/1‑94 (MQ=60)
                                                                                   GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTT            >  SRR4302545.10818174/1‑94 (MQ=60)
                                                                                   GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCACAATTGCGCATATTTTT            >  SRR4302545.7977862/1‑94 (MQ=60)
                                                                                    AAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTC           >  SRR4302545.436214/1‑94 (MQ=60)
                                                                                     TAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCA          <  SRR4302545.1767032/94‑1 (MQ=60)
                                                                                     AAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTATCA          <  SRR4302545.7562586/94‑1 (MQ=60)
                                                                                      AGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCAC         <  SRR4302545.1694319/94‑1 (MQ=60)
                                                                                      AGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCAC         <  SRR4302545.1753658/94‑1 (MQ=60)
                                                                                        AACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCC       <  SRR4302545.1235187/94‑1 (MQ=60)
                                                                                        AACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCC       >  SRR4302545.10277516/1‑94 (MQ=60)
                                                                                         ACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT      <  SRR4302545.7170834/94‑1 (MQ=60)
                                                                                         ACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT      <  SRR4302545.9180209/94‑1 (MQ=60)
                                                                                         ACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT      >  SRR4302545.687143/1‑94 (MQ=60)
                                                                                         ACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT      <  SRR4302545.1602810/94‑1 (MQ=60)
                                                                                         ACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT      <  SRR4302545.1602811/94‑1 (MQ=60)
                                                                                           CCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTC    >  SRR4302545.92803/1‑94 (MQ=60)
                                                                                           CCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTC    <  SRR4302545.2822140/94‑1 (MQ=60)
                                                                                            CCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCA   <  SRR4302545.3885110/94‑1 (MQ=60)
                                                                                             CGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCAA  >  SRR4302545.8399163/1‑94 (MQ=60)
                                                                                             |                                                                                             
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCAA  >  NC_000913/3265348‑3265534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑