Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,265,441 |
T→C |
intergenic (+202/‑33) |
tdcR → / → yhaB |
threonine dehydratase operon activator protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,265,441 | 0 | T | C | 99.6%
| 930.2
/ NA
| 266 | intergenic (+202/‑33) | tdcR/yhaB | threonine dehydratase operon activator protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (128/137); minor base A (0/1); total (128/138) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 271 total aligned reads displayed.
AGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT > NC_000913/3265351‑3265530
|
agagCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGc > 1:2645130/1‑93 (MQ=255)
agagCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGc > 1:3341277/1‑93 (MQ=255)
agagCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGc > 1:2135619/1‑93 (MQ=255)
gagCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCcgcg > 1:1908571/1‑93 (MQ=255)
agCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGa < 2:1841931/93‑1 (MQ=255)
agCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGa < 1:6366028/93‑1 (MQ=255)
gCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAg < 1:3248357/93‑1 (MQ=255)
cTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTATAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAgg < 1:2761986/93‑1 (MQ=255)
ttttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGa < 1:3049520/93‑1 (MQ=255)
ttttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGa < 1:831698/93‑1 (MQ=255)
ttttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGa < 2:2568923/93‑1 (MQ=255)
ttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGaaa < 1:4453742/93‑1 (MQ=255)
tGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGaaaa > 2:5940341/1‑93 (MQ=255)
tGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGaaaa < 2:4902607/93‑1 (MQ=255)
gATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGaaaaa > 2:403676/1‑92 (MQ=255)
aTCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATa < 2:1912184/93‑1 (MQ=255)
aTCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATa < 2:958692/93‑1 (MQ=255)
tCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATaa < 1:5374050/93‑1 (MQ=255)
tCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATaa > 1:3473636/1‑93 (MQ=255)
gCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCa > 2:4376304/1‑93 (MQ=255)
gCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCa < 1:4339579/93‑1 (MQ=255)
gTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGAAtt > 1:5242555/1‑92 (MQ=255)
tAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCt > 2:1286254/1‑93 (MQ=255)
aGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCta < 2:2825977/93‑1 (MQ=255)
aGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCta < 1:3731328/93‑1 (MQ=255)
aGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGGAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCta > 2:4949328/1‑93 (MQ=255)
ggCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCtat < 2:1604087/93‑1 (MQ=255)
ggCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCtat < 2:5244614/93‑1 (MQ=255)
ggCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCtat < 1:708714/93‑1 (MQ=255)
cacaGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCtattat > 2:5821054/1‑93 (MQ=255)
acaGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTattatt > 1:4115371/1‑93 (MQ=255)
acaGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTattatt > 2:5311749/1‑93 (MQ=255)
aGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgt < 2:3084508/93‑1 (MQ=255)
gAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtt > 2:2494245/1‑93 (MQ=255)
gAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtt > 1:1709982/1‑93 (MQ=255)
gAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtt > 2:5723334/1‑93 (MQ=255)
gAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtt < 1:5797411/93‑1 (MQ=255)
aaTGTTGCTTCGTTTGCTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgttt < 1:4169393/93‑1 (MQ=255)
aaTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgttt < 2:2139302/93‑1 (MQ=255)
aaTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgttt > 1:924578/1‑93 (MQ=255)
aaTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgttt > 2:1400928/1‑93 (MQ=255)
aaTGTTGCTTCGTGTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgttt < 2:1562731/93‑1 (MQ=255)
aTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAGCCCCGCGAGGAAAATAAGCATCTATTAttgtttg < 1:2873188/93‑1 (MQ=255)
aTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGTAAAATAAGCATCTATTAttgtttg > 2:6346652/1‑93 (MQ=255)
aTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtttg > 1:5695736/1‑93 (MQ=255)
aTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtttg < 2:4256527/93‑1 (MQ=255)
aTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAttgtttg < 2:5481162/93‑1 (MQ=255)
gTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTc > 2:4724789/1‑93 (MQ=255)
gTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGCTTGTc < 2:4205536/93‑1 (MQ=255)
ttGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCa < 2:6101794/93‑1 (MQ=255)
tGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCat < 2:5427856/93‑1 (MQ=255)
gCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCatg > 1:2009443/1‑93 (MQ=255)
cTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCatga < 1:1422079/93‑1 (MQ=255)
cTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCatga < 2:3307593/93‑1 (MQ=255)
ttCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCatgat > 1:1291843/1‑93 (MQ=255)
ttCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCatgat > 2:6232443/1‑93 (MQ=255)
tCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCatgatg < 2:4678248/93‑1 (MQ=255)
cGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCAtgatga < 2:1289596/93‑1 (MQ=255)
cGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCAtgatga > 2:5517863/1‑93 (MQ=255)
cGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCAtgatga < 2:2760204/93‑1 (MQ=255)
tttACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACa > 1:2443100/1‑93 (MQ=255)
tttACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACa > 2:357425/1‑93 (MQ=255)
ttACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACaa > 1:2387629/1‑93 (MQ=255)
cTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAaggc > 2:3466179/1‑93 (MQ=255)
aaCGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAaggcaggc > 2:5034503/1‑93 (MQ=255)
aCGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAggcaggca > 1:4660801/1‑93 (MQ=255)
gCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATc < 1:6020103/93‑1 (MQ=255)
cGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCaa > 2:24226/1‑93 (MQ=255)
gggTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAt < 2:4838293/93‑1 (MQ=255)
gggTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAt < 1:1566189/93‑1 (MQ=255)
gggTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAt < 1:4835318/93‑1 (MQ=255)
tAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGaa < 2:1695823/93‑1 (MQ=255)
tAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGaa > 2:3671580/1‑93 (MQ=255)
tAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGaa < 2:3353591/93‑1 (MQ=255)
aaTGAGCGTTTTTTGATAGTGCGAAATAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAg > 1:3818202/1‑93 (MQ=255)
tGAGCGGTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGc < 1:1873000/93‑1 (MQ=255)
aGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCtt > 1:5087036/1‑93 (MQ=255)
aGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCtt > 1:6438821/1‑93 (MQ=255)
aGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCtt > 2:1464650/1‑93 (MQ=255)
gCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTc < 1:477440/93‑1 (MQ=255)
cGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTcc > 1:4003951/1‑93 (MQ=255)
tttttGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCaa < 1:4996531/93‑1 (MQ=255)
tttttGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCaa < 1:2984255/93‑1 (MQ=255)
tttGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAtt < 2:1219717/93‑1 (MQ=255)
tGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTgc < 1:5526653/93‑1 (MQ=255)
tGAGAGTGCGAAAGAGCCCCGCGAGGAAAATAAGCATCTATTATAGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTgc < 1:2548862/93‑1 (MQ=255)
gATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATATATTATTGTTTGTCATGATGATAAGGCAGGCATCAATGAAAGGCTTCCCAATTgcg > 2:3747993/1‑93 (MQ=255)
tAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCa < 2:3980285/93‑1 (MQ=255)
tAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCa > 1:388286/1‑93 (MQ=255)
aGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCat > 1:3165435/1‑93 (MQ=255)
gTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTTCCAATTGCGCata > 1:1095987/1‑93 (MQ=255)
gTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCata > 1:4613504/1‑93 (MQ=255)
gTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCata < 1:3104203/93‑1 (MQ=255)
tGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCatat < 2:2701825/93‑1 (MQ=255)
tGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCatat < 2:5985216/93‑1 (MQ=255)
aaaGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATAttttt > 1:1008909/1‑93 (MQ=255)
aGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCa > 2:1029812/1‑93 (MQ=255)
aCCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCAccc < 2:4565627/93‑1 (MQ=255)
aCCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCAccc > 1:6148313/1‑93 (MQ=255)
ccccGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCt > 2:804055/1‑93 (MQ=255)
|
AGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCT > NC_000913/3265351‑3265530
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCA > NC_000913/3265348‑3265533
|
CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCC > SRR4302537.5280704/1‑94 (MQ=60)
ACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCG < SRR4302537.3178503/94‑1 (MQ=60)
ACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCG > SRR4302537.5175858/1‑94 (MQ=60)
CAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGC > SRR4302537.2663632/1‑94 (MQ=60)
CAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGC > SRR4302537.2150656/1‑94 (MQ=60)
CAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGC < SRR4302537.1693708/94‑1 (MQ=60)
CAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGC > SRR4302537.3364933/1‑94 (MQ=60)
CAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGC > SRR4302537.1238005/1‑94 (MQ=60)
AGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCG > SRR4302537.1921823/1‑94 (MQ=60)
AGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAG < SRR4302537.6409447/94‑1 (MQ=60)
GCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGG > SRR4302537.669521/1‑94 (MQ=60)
GCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGG < SRR4302537.3271254/94‑1 (MQ=60)
CTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGA > SRR4302537.4816514/1‑94 (MQ=60)
CTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTATAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGA < SRR4302537.2781255/94‑1 (MQ=60)
TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA < SRR4302537.3070770/94‑1 (MQ=60)
TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA < SRR4302537.1153147/94‑1 (MQ=60)
TTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAA < SRR4302537.837388/94‑1 (MQ=60)
TTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAA < SRR4302537.4484499/94‑1 (MQ=60)
TTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAA > SRR4302537.1426282/1‑94 (MQ=60)
TTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAA < SRR4302537.2995601/94‑1 (MQ=60)
TGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAAT > SRR4302537.5576778/1‑94 (MQ=60)
ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA > SRR4302537.3498215/1‑94 (MQ=60)
ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA < SRR4302537.1976203/94‑1 (MQ=60)
ATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGGAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAA > SRR4302537.2822846/1‑94 (MQ=60)
TCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAG < SRR4302537.5410800/94‑1 (MQ=60)
TCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAG < SRR4302537.1963556/94‑1 (MQ=60)
TCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAG < SRR4302537.4572819/94‑1 (MQ=60)
CGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGC > SRR4302537.4864407/1‑94 (MQ=60)
CGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGC < SRR4302537.2308519/94‑1 (MQ=60)
GGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCA > SRR4302537.6313198/1‑94 (MQ=60)
GCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCAT < SRR4302537.5158494/94‑1 (MQ=60)
GCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCAT < SRR4302537.4369691/94‑1 (MQ=60)
GCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCAT < SRR4302537.1041131/94‑1 (MQ=60)
CGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGaatt > SRR4302537.5278634/1‑90 (MQ=60)
GTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCT > SRR4302537.3743199/1‑94 (MQ=60)
GTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCT < SRR4302537.4606511/94‑1 (MQ=60)
TAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCAAAAGAACCCCGCGAGGAAAATAAGCATCTA < SRR4302537.919935/94‑1 (MQ=60)
AGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTAT < SRR4302537.3254189/94‑1 (MQ=60)
AGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTAT < SRR4302537.3757537/94‑1 (MQ=60)
AGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGCAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTAT < SRR4302537.157953/94‑1 (MQ=60)
GGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATT < SRR4302537.713564/94‑1 (MQ=60)
GGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATT < SRR4302537.3311585/94‑1 (MQ=60)
CCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAT < SRR4302537.6401645/94‑1 (MQ=60)
CCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTAT > SRR4302537.3665548/1‑94 (MQ=60)
CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT > SRR4302537.205536/1‑94 (MQ=60)
CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT > SRR4302537.4144117/1‑94 (MQ=60)
CACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATT < SRR4302537.1855040/94‑1 (MQ=60)
CAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGT < SRR4302537.4772279/94‑1 (MQ=60)
CAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGT < SRR4302537.4676791/94‑1 (MQ=60)
AGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTT > SRR4302537.1721927/1‑94 (MQ=60)
AGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTT > SRR4302537.2568393/1‑94 (MQ=60)
AGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTT > SRR4302537.793936/1‑94 (MQ=60)
GAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTT > SRR4302537.4058912/1‑94 (MQ=60)
GAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTT < SRR4302537.1518190/94‑1 (MQ=60)
GAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTT < SRR4302537.5837157/94‑1 (MQ=60)
GAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTT > SRR4302537.6090419/1‑94 (MQ=60)
GAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTT > SRR4302537.930957/1‑94 (MQ=60)
AATGTTGCTTCGTTTGCTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTG < SRR4302537.4198513/94‑1 (MQ=60)
AATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTG > SRR4302537.4173089/1‑94 (MQ=60)
AATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTG > SRR4302537.5734709/1‑94 (MQ=60)
AATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATACTGCGAAAGAACTGCGCGAGGAAAATAAGCATCTATTATTGTTTG > SRR4302537.1056279/1‑94 (MQ=60)
ATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAGCCCCGCGAGGAAAATAAGCATCTATTATTGTTTGT < SRR4302537.2893352/94‑1 (MQ=60)
TTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCAT > SRR4302537.5086240/1‑94 (MQ=60)
TTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCAT < SRR4302537.5609944/94‑1 (MQ=60)
TGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATG > SRR4302537.2023447/1‑94 (MQ=60)
TGCTGCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATG < SRR4302537.4207374/94‑1 (MQ=60)
CTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGAT < SRR4302537.1431982/94‑1 (MQ=60)
CTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGAT < SRR4302537.5748042/94‑1 (MQ=60)
CTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGAT > SRR4302537.1300826/1‑94 (MQ=60)
TTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATG < SRR4302537.3780634/94‑1 (MQ=60)
TTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATG > SRR4302537.5859795/1‑94 (MQ=60)
CGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGAC < SRR4302537.5761768/94‑1 (MQ=60)
CGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGAC > SRR4302537.2094593/1‑94 (MQ=60)
GTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA > SRR4302537.2460296/1‑94 (MQ=60)
GTTTACTGTAACGCCGGGCAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACA > SRR4302537.395933/1‑94 (MQ=60)
TTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAA > SRR4302537.2404447/1‑94 (MQ=60)
TTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAG < SRR4302537.1639269/94‑1 (MQ=60)
TACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGG < SRR4302537.2525992/94‑1 (MQ=60)
ACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGC > SRR4302537.5322442/1‑94 (MQ=60)
ACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGC < SRR4302537.5415398/94‑1 (MQ=60)
ACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGC > SRR4302537.2521491/1‑94 (MQ=60)
CTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCA > SRR4302537.6414160/1‑94 (MQ=60)
CTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCA > SRR4302537.941792/1‑94 (MQ=60)
TGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAG > SRR4302537.794276/1‑94 (MQ=60)
AACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCA > SRR4302537.4693016/1‑94 (MQ=60)
ACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCAT < SRR4302537.2409715/94‑1 (MQ=60)
CGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATC > SRR4302537.3869995/1‑94 (MQ=60)
GCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCA < SRR4302537.6061461/94‑1 (MQ=60)
CCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAA > SRR4302537.3399269/1‑94 (MQ=60)
CGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAT > SRR4302537.1405382/1‑94 (MQ=60)
CGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAT > SRR4302537.1910220/1‑94 (MQ=60)
GGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG > SRR4302537.3158644/1‑94 (MQ=60)
GGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG < SRR4302537.1577116/94‑1 (MQ=60)
GGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATG < SRR4302537.4868708/94‑1 (MQ=60)
GTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAA < SRR4302537.2810234/94‑1 (MQ=60)
GTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAA < SRR4302537.3373567/94‑1 (MQ=60)
GTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAA < SRR4302537.863324/94‑1 (MQ=60)
TAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAA < SRR4302537.2597935/94‑1 (MQ=60)
AAATGAGCGTTTTTTGATAGTGCGAAATAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAG > SRR4302537.3844975/1‑94 (MQ=60)
AAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAG < SRR4302537.4426786/94‑1 (MQ=60)
AAATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAG < SRR4302537.4751882/94‑1 (MQ=60)
AATGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGG > SRR4302537.3034789/1‑94 (MQ=60)
TGAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCT > SRR4302537.395600/1‑94 (MQ=60)
TGAGCGGTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCT < SRR4302537.1886033/94‑1 (MQ=60)
GAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTT > SRR4302537.5122060/1‑94 (MQ=60)
GAGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTT > SRR4302537.6482530/1‑94 (MQ=60)
AGCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTC < SRR4302537.5058150/94‑1 (MQ=60)
GCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCC > SRR4302537.4031977/1‑94 (MQ=60)
GCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCC < SRR4302537.6147069/94‑1 (MQ=60)
GCGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCA < SRR4302537.480705/94‑1 (MQ=60)
CGTTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCC > SRR4302537.3235377/1‑94 (MQ=60)
TTTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAA < SRR4302537.5260499/94‑1 (MQ=60)
TTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT > SRR4302537.4220951/1‑94 (MQ=60)
TTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT < SRR4302537.5030964/94‑1 (MQ=60)
TTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT < SRR4302537.3005110/94‑1 (MQ=60)
TTTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT > SRR4302537.270324/1‑94 (MQ=60)
TTTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATT > SRR4302537.4962345/1‑94 (MQ=60)
TTTGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTG > SRR4302537.302464/1‑94 (MQ=60)
TGATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCG < SRR4302537.5564378/94‑1 (MQ=60)
TGAGAGTGCGAAAGAGCCCCGCGAGGAAAATAAGCATCTATTATAGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCG < SRR4302537.2566718/94‑1 (MQ=60)
ATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCA > SRR4302537.390972/1‑94 (MQ=60)
ATAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCA > SRR4302537.3814112/1‑94 (MQ=60)
TAGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCAT > SRR4302537.3187662/1‑94 (MQ=60)
AGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTTCCAATTGCGCATA > SRR4302537.1103558/1‑94 (MQ=60)
AGTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATA > SRR4302537.4645451/1‑94 (MQ=60)
GTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATAT < SRR4302537.3125885/94‑1 (MQ=60)
GTGCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATAT > SRR4302537.2266687/1‑94 (MQ=60)
GCGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTT > SRR4302537.4451208/1‑94 (MQ=60)
CGAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGGAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTT > SRR4302537.290162/1‑94 (MQ=60)
GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTT < SRR4302537.3117204/94‑1 (MQ=60)
GAAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTT > SRR4302537.1015866/1‑94 (MQ=60)
AAAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTC > SRR4302537.5556637/1‑94 (MQ=60)
AAGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCA < SRR4302537.4120085/94‑1 (MQ=60)
AGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCAC > SRR4302537.669307/1‑94 (MQ=60)
AGAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCAC > SRR4302537.318291/1‑94 (MQ=60)
GAACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACC > SRR4302537.1733797/1‑94 (MQ=60)
AACCCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCC > SRR4302537.6190601/1‑94 (MQ=60)
CCCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTC < SRR4302537.3247067/94‑1 (MQ=60)
CCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCA < SRR4302537.1877928/94‑1 (MQ=60)
CCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCA > SRR4302537.6282198/1‑94 (MQ=60)
CCGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCA < SRR4302537.6062559/94‑1 (MQ=60)
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CACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCA > NC_000913/3265348‑3265533
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
