Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,349,294 T→C Q456R (CAG→CGG)  arcB ← aerobic respiration sensor‑response protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,349,2940TC99.8% 1945.1 / NA 553Q456R (CAG→CGG) arcBaerobic respiration sensor‑response protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (283/269);  minor base A (0/1);  total (283/270)
Fisher's exact test for biased strand distribution p-value = 4.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 568 total aligned reads displayed.

TAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCAT  >  NC_000913/3349205‑3349384
                                                                                         |                                                                                          
cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTa                                                                                        <  1:6714285‑M1/41‑1 (MQ=255)
cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTa                                                                                        <  2:5304916‑M1/41‑1 (MQ=255)
 cccgcccatagttttcgccagacgacgagaaacggcaagaccaatgccggtgCCGGTGCCAGGTTTACCGCCATGACTGTCTTTCACCCGGTaa                                                                                       >  2:3902165‑M1/53‑94 (MQ=255)
  ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAAt                                                                                      <  1:6895089‑M1/43‑1 (MQ=255)
    gcccatatttttcgccagacgacgagaaacggccagacccataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTGATAc                                                                                    <  1:8015992‑M1/45‑1 (MQ=255)
    gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATAc                                                                                    >  2:9695894‑M1/50‑94 (MQ=255)
    gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATAc                                                                                    >  2:5150242‑M1/50‑94 (MQ=255)
        atattattcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATgg                                                                                >  2:8592195‑M1/46‑94 (MQ=255)
         tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGc                                                                               >  2:2537817‑M1/45‑94 (MQ=255)
             tttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGaaa                                                                           <  2:3703765‑M1/54‑1 (MQ=255)
              ttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGaaaa                                                                          <  2:9062384‑M1/55‑1 (MQ=255)
               tcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAAt                                                                         >  1:10355333‑M1/39‑94 (MQ=255)
                 gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAAttt                                                                       >  1:1699140‑M1/37‑94 (MQ=255)
                 gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAAttt                                                                       <  2:4890554‑M1/58‑1 (MQ=255)
                 gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAAttt                                                                       <  1:4223515‑M1/58‑1 (MQ=255)
                  ccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAAtttt                                                                      >  1:9838321‑M1/36‑94 (MQ=255)
                  ccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAACGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAAtttt                                                                      <  2:10300907‑M1/59‑1 (MQ=255)
                   cagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTa                                                                     <  1:2630594‑M1/60‑1 (MQ=255)
                    agacgacgagaaacggccagaccaataccggtgCCGGCGGCAGGTTTACCGCCATGACTGTCTTTGACCCGGTAATACATGGCGAAAATTTTAt                                                                    <  2:5497433‑M1/61‑1 (MQ=255)
                      acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATcc                                                                  <  2:4444845‑M1/63‑1 (MQ=255)
                        gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAg                                                                <  1:2855929‑M1/65‑1 (MQ=255)
                        gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAg                                                                >  2:5007373‑M1/30‑94 (MQ=255)
                         acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGc                                                               >  2:3233835‑M1/29‑94 (MQ=255)
                         acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGc                                                               <  2:772793‑M1/66‑1 (MQ=255)
                          cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCt                                                              >  1:3338224‑M1/28‑94 (MQ=255)
                           gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTc                                                             <  2:1546593‑M1/68‑1 (MQ=255)
                           gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTc                                                             >  1:7630305‑M1/27‑94 (MQ=255)
                            agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCa                                                            >  1:9049217‑M1/26‑94 (MQ=255)
                            agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCa                                                            <  1:5229563‑M1/69‑1 (MQ=255)
                             gaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCCCCCGGTAATACATGGCGAAAATTTTATCCAGCTCAt                                                           >  1:8271619‑M1/25‑94 (MQ=255)
                              aaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAACATTTTATCCAGCTCATc                                                          <  1:5534458‑M1/71‑1 (MQ=255)
                               aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                                                         >  1:8735724‑M1/23‑94 (MQ=255)
                                acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt                                                        >  1:10157647‑M1/22‑94 (MQ=255)
                                 cggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                                                       >  2:4286840‑M1/21‑94 (MQ=255)
                                  ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc                                                      <  1:1076950‑M1/75‑1 (MQ=255)
                                  ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc                                                      <  1:7901985‑M1/75‑1 (MQ=255)
                                   gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                                                     <  1:3833670‑M1/76‑1 (MQ=255)
                                   gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                                                     >  2:2044906‑M1/19‑94 (MQ=255)
                                      agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                                                  <  2:10025703‑M1/79‑1 (MQ=255)
                                      agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                                                  <  2:4086115‑M1/79‑1 (MQ=255)
                                      agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                                                  <  2:10568820‑M1/79‑1 (MQ=255)
                                      agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                                                  >  1:6045903‑M1/16‑94 (MQ=255)
                                       gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                                                 >  1:3606538‑M1/15‑94 (MQ=255)
                                        accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATg                                                >  1:2051495‑M1/14‑94 (MQ=255)
                                        accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTG‑GGAATGc                                               <  2:870398‑M1/81‑1 (MQ=255)
                                         ccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGc                                               >  1:314529‑M1/13‑94 (MQ=255)
                                          caataccggtgCCGGTGGCCGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc                                              >  1:8156032‑M1/12‑94 (MQ=255)
                                          caataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc                                              <  2:7329391‑M1/83‑1 (MQ=255)
                                          caataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc                                              >  2:1236743‑M1/12‑94 (MQ=255)
                                               ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc                                         >  2:3497534‑M1/7‑94 (MQ=255)
                                               ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc                                         >  1:468572‑M1/7‑94 (MQ=255)
                                                cggtgCCGGTGGCAGGTTTTCCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAcc                                        >  1:7687076‑M1/6‑94 (MQ=255)
                                                 ggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa                                       <  1:5640985‑M1/90‑1 (MQ=255)
                                                 ggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa                                       >  2:816844‑M1/5‑94 (MQ=255)
                                                  gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCag                                      >  2:9590929‑M1/4‑94 (MQ=255)
                                                  gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCag                                      <  2:8340891‑M1/91‑1 (MQ=255)
                                                    gCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag                                    <  1:2965408‑M1/93‑1 (MQ=255)
                                                       ggTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCt                                 <  2:8000287/94‑1 (MQ=255)
                                                         tGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTc                               <  2:6703504/94‑1 (MQ=255)
                                                          ggCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTcc                              <  1:9424593/94‑1 (MQ=255)
                                                          ggCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTcc                              <  2:7484809/94‑1 (MQ=255)
                                                            cAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCAc                            >  1:4799929/1‑94 (MQ=255)
                                                             aGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACt                           >  1:8889040/1‑94 (MQ=255)
                                                                 ttACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCaa                       <  2:588103/94‑1 (MQ=255)
                                                                    ccGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAAt                    >  1:1344924/1‑94 (MQ=255)
                                                                     cGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATg                   <  1:7473872/94‑1 (MQ=255)
                                                                     cGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATg                   >  2:609414/1‑94 (MQ=255)
                                                                     cGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATg                   <  2:184621/94‑1 (MQ=255)
                                                                     cGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATg                   <  2:3043397/94‑1 (MQ=255)
                                                                     cGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATg                   <  2:1696706/94‑1 (MQ=255)
                                                                      gCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgc                  >  2:6444784/1‑94 (MQ=255)
                                                                      gCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgc                  >  1:6252202/1‑94 (MQ=255)
                                                                       cgaTGACTGTCTTTCACCCGATAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCGTCCACTTCAAAATgca                 <  1:535262/92‑1 (MQ=255)
                                                                       ccATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCTCTTCAAAATgca                 <  1:7390817/94‑1 (MQ=255)
                                                                        cATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcag                >  2:4693861/1‑94 (MQ=255)
                                                                         aTGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcagc               <  1:719835/94‑1 (MQ=255)
                                                                         aTGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcagc               >  2:8827457/1‑94 (MQ=255)
                                                                          tGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcagca              <  1:1574869/94‑1 (MQ=255)
                                                                          tGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcagca              >  1:5758777/1‑94 (MQ=255)
                                                                          tGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcagca              <  1:7828442/94‑1 (MQ=255)
                                                                           gACTGTCTTTCACCAGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCat             <  1:4367964/94‑1 (MQ=255)
                                                                            aCTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCata            >  1:6501497/1‑94 (MQ=255)
                                                                            aCTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCata            <  2:2398436/94‑1 (MQ=255)
                                                                            aCTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCata            <  2:6656609/94‑1 (MQ=255)
                                                                             cTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCatat           >  2:8928338/1‑94 (MQ=255)
                                                                             cTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCatat           >  1:1226374/1‑94 (MQ=255)
                                                                              tGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATc          <  1:10004484/94‑1 (MQ=255)
                                                                               gTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCg         <  1:854419/94‑1 (MQ=255)
                                                                               gTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCg         <  1:184177/94‑1 (MQ=255)
                                                                                tCTTTCCCCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGc        <  1:4535416/94‑1 (MQ=255)
                                                                                tCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGc        <  2:710322/94‑1 (MQ=255)
                                                                                tCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGc        >  1:4037015/1‑94 (MQ=255)
                                                                                 cTTTCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGcc       <  2:2626511/94‑1 (MQ=255)
                                                                                  tttCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCt      >  1:2186273/1‑94 (MQ=255)
                                                                                  tttCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCt      >  1:234307/1‑94 (MQ=255)
                                                                                   ttCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCtt     <  2:7648274/94‑1 (MQ=255)
                                                                                   ttCACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCtt     >  2:2209870/1‑94 (MQ=255)
                                                                                    tCACCCGGTAATACATGGCGACAATTTCATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTc    <  1:5036382/94‑1 (MQ=255)
                                                                                     cACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTct   >  2:2843692/1‑93 (MQ=255)
                                                                                     cACCCGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCa   <  2:4802752/94‑1 (MQ=255)
                                                                                         |                                                                                          
TAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCAT  >  NC_000913/3349205‑3349384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 266 total aligned reads displayed.
TGGATGAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATCGGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCCT  >  NC_000913/3352161‑3352343
                                                                                             |                                                                                         
TGGATGAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATG                                                                                           >  SRR4302545.2282825/1‑94 (MQ=60)
TGGATGAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATG                                                                                           <  SRR4302545.2198418/94‑1 (MQ=60)
      AGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGC                                                                                     >  SRR4302545.6295840/1‑94 (MQ=60)
      AGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGC                                                                                     <  SRR4302545.6802388/94‑1 (MQ=60)
      AGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGC                                                                                     <  SRR4302545.823018/94‑1 (MQ=60)
       GCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCG                                                                                    <  SRR4302545.9207240/94‑1 (MQ=60)
       GCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCG                                                                                    >  SRR4302545.810781/1‑94 (MQ=60)
         AGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCG                                                                                  >  SRR4302545.9915936/1‑94 (MQ=60)
         AGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCG                                                                                  <  SRR4302545.4257881/94‑1 (MQ=60)
         AGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCG                                                                                  >  SRR4302545.7137993/1‑94 (MQ=60)
          GCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGC                                                                                 <  SRR4302545.3680629/94‑1 (MQ=60)
          GCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGC                                                                                 >  SRR4302545.7292897/1‑94 (MQ=60)
             TGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTA                                                                              <  SRR4302545.8528329/94‑1 (MQ=60)
              GCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTAT                                                                             <  SRR4302545.6635200/94‑1 (MQ=60)
              GCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTAT                                                                             <  SRR4302545.1906058/94‑1 (MQ=60)
              GCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTAT                                                                             <  SRR4302545.1906059/94‑1 (MQ=60)
              GCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTAT                                                                             <  SRR4302545.1955160/94‑1 (MQ=60)
              GCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTAT                                                                             <  SRR4302545.4133470/94‑1 (MQ=60)
               CTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATG                                                                            >  SRR4302545.8011891/1‑94 (MQ=60)
               CTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATG                                                                            >  SRR4302545.8011893/1‑94 (MQ=60)
               CTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATG                                                                            >  SRR4302545.2810037/1‑94 (MQ=60)
                TCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGA                                                                           <  SRR4302545.3654238/94‑1 (MQ=60)
                 CATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGAC                                                                          <  SRR4302545.2806470/94‑1 (MQ=60)
                   TCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACAC                                                                        <  SRR4302545.2528960/94‑1 (MQ=60)
                   TCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACAC                                                                        <  SRR4302545.1242673/94‑1 (MQ=60)
                   TCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACAC                                                                        <  SRR4302545.1242672/94‑1 (MQ=60)
                    CATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACG                                                                       <  SRR4302545.10128061/94‑1 (MQ=60)
                    CATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACG                                                                       <  SRR4302545.558204/94‑1 (MQ=60)
                    CATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACG                                                                       <  SRR4302545.990805/94‑1 (MQ=60)
                     ATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGC                                                                      >  SRR4302545.6336742/1‑94 (MQ=60)
                     ATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGC                                                                      >  SRR4302545.3756030/1‑94 (MQ=60)
                      TATTTATGCAGTGATTGAGATCCCCTCTTCACCGTATTAACCGTTGCGAAAAGGACAACAAGGGGGCGAATGCGAAACGCGCGAATGACACGCA                                                                     <  SRR4302545.9694071/94‑1 (MQ=60)
                      TATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCA                                                                     <  SRR4302545.4387584/94‑1 (MQ=60)
                      TATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCATATGACACGCA                                                                     >  SRR4302545.8677725/1‑94 (MQ=60)
                       ATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAA                                                                    <  SRR4302545.617660/94‑1 (MQ=60)
                       ATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAA                                                                    <  SRR4302545.10235284/94‑1 (MQ=60)
                       ATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAA                                                                    >  SRR4302545.3856847/1‑94 (MQ=60)
                        TTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAA                                                                   <  SRR4302545.7208226/94‑1 (MQ=60)
                         TTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAAC                                                                  >  SRR4302545.10763075/1‑94 (MQ=60)
                           ATGCAGTAATTGAGATCCCCTCTTCACCGTATTAAGCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCC                                                                <  SRR4302545.6751065/94‑1 (MQ=60)
                           ATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCC                                                                >  SRR4302545.2003067/1‑94 (MQ=60)
                           ATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCC                                                                <  SRR4302545.6751064/94‑1 (MQ=60)
                           ATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCC                                                                <  SRR4302545.10436899/94‑1 (MQ=60)
                           ATGCAGTAATTGAGATCCCCTCTGCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCC                                                                <  SRR4302545.5962114/94‑1 (MQ=60)
                            TGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCC                                                               <  SRR4302545.7746642/94‑1 (MQ=60)
                            TGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCC                                                               <  SRR4302545.1859107/94‑1 (MQ=60)
                            TGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCC                                                               <  SRR4302545.6057711/94‑1 (MQ=60)
                             GCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCG                                                              >  SRR4302545.8873006/1‑94 (MQ=60)
                             GCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCG                                                              <  SRR4302545.3760804/94‑1 (MQ=60)
                             GCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCG                                                              <  SRR4302545.9953145/94‑1 (MQ=60)
                              CAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGT                                                             >  SRR4302545.3202786/1‑94 (MQ=60)
                              CAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGT                                                             >  SRR4302545.9633401/1‑94 (MQ=60)
                               AGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTC                                                            >  SRR4302545.9784071/1‑94 (MQ=60)
                               AGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTC                                                            >  SRR4302545.3500226/1‑94 (MQ=60)
                               AGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTC                                                            >  SRR4302545.7265729/1‑94 (MQ=60)
                                GTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCG                                                           <  SRR4302545.3871442/94‑1 (MQ=60)
                                GTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCG                                                           <  SRR4302545.9474450/94‑1 (MQ=60)
                                 TAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGC                                                          >  SRR4302545.4143509/1‑94 (MQ=60)
                                  AATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCC                                                         >  SRR4302545.4979599/1‑94 (MQ=60)
                                  AATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCC                                                         >  SRR4302545.1845875/1‑94 (MQ=60)
                                   ATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCA                                                        >  SRR4302545.647352/1‑94 (MQ=60)
                                   ATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCA                                                        >  SRR4302545.6686897/1‑94 (MQ=60)
                                    TTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCAC                                                       <  SRR4302545.900778/94‑1 (MQ=60)
                                    TTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCAC                                                       >  SRR4302545.5208876/1‑94 (MQ=60)
                                    TTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCAC                                                       <  SRR4302545.8731479/94‑1 (MQ=60)
                                    TTGAGACCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCAC                                                       <  SRR4302545.10741993/94‑1 (MQ=60)
                                     TGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACG                                                      >  SRR4302545.3892045/1‑94 (MQ=60)
                                     TGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACG                                                      <  SRR4302545.3542430/94‑1 (MQ=60)
                                     TGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACG                                                      >  SRR4302545.5939567/1‑94 (MQ=60)
                                     TGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACA                                                      <  SRR4302545.6875884/94‑1 (MQ=60)
                                      GAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGC                                                     <  SRR4302545.3876025/94‑1 (MQ=60)
                                       AGATCCCCTCTTCACCGTATTAACCGACGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCT                                                    >  SRR4302545.3124418/1‑94 (MQ=60)
                                         ATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCT                                                  >  SRR4302545.3979328/1‑94 (MQ=60)
                                         ATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCT                                                  >  SRR4302545.9115636/1‑94 (MQ=60)
                                          TCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTT                                                 >  SRR4302545.2949898/1‑94 (MQ=60)
                                          TCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTT                                                 >  SRR4302545.9838937/1‑94 (MQ=60)
                                          ACCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTT                                                 <  SRR4302545.10210251/94‑1 (MQ=60)
                                           CCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTT                                                <  SRR4302545.8247738/94‑1 (MQ=60)
                                           CCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTT                                                <  SRR4302545.10753471/94‑1 (MQ=60)
                                           CCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTT                                                <  SRR4302545.8697692/94‑1 (MQ=60)
                                            CCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTC                                               >  SRR4302545.6173535/1‑94 (MQ=60)
                                             CCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCT                                              >  SRR4302545.9532936/1‑94 (MQ=60)
                                             CCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCT                                              <  SRR4302545.5453072/94‑1 (MQ=60)
                                             CCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCT                                              <  SRR4302545.8109280/94‑1 (MQ=60)
                                             CCTCTTCACCGTAATAACCGATGCGAAAAAGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCT                                              >  SRR4302545.121809/1‑94 (MQ=60)
                                              CTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTG                                             <  SRR4302545.7636209/94‑1 (MQ=60)
                                              CTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTG                                             >  SRR4302545.9302815/1‑94 (MQ=60)
                                              CTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTG                                             >  SRR4302545.6133048/1‑94 (MQ=60)
                                              CTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTG                                             >  SRR4302545.1534820/1‑94 (MQ=60)
                                                CTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTG                                           <  SRR4302545.1441600/94‑1 (MQ=60)
                                                 TTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCCCGCCCTTTCTGTGC                                          >  SRR4302545.7528501/1‑94 (MQ=60)
                                                 TTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGC                                          >  SRR4302545.5477307/1‑94 (MQ=60)
                                                  TCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCC                                         >  SRR4302545.4122327/1‑94 (MQ=60)
                                                   CACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCG                                        >  SRR4302545.9824602/1‑94 (MQ=60)
                                                   CACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCC                                        >  SRR4302545.1305617/1‑94 (MQ=60)
                                                   CACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCC                                        >  SRR4302545.10446426/1‑94 (MQ=60)
                                                   CACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCC                                        >  SRR4302545.3051081/1‑94 (MQ=60)
                                                    ACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCG                                       >  SRR4302545.3639413/1‑94 (MQ=60)
                                                    ACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCG                                       >  SRR4302545.2957993/1‑94 (MQ=60)
                                                    ACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCG                                       >  SRR4302545.6879750/1‑94 (MQ=60)
                                                    ACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCG                                       >  SRR4302545.2253448/1‑94 (MQ=60)
                                                     CCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGT                                      >  SRR4302545.8146835/1‑94 (MQ=60)
                                                     CCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGT                                      <  SRR4302545.10602914/94‑1 (MQ=60)
                                                     CCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGT                                      <  SRR4302545.8962535/94‑1 (MQ=60)
                                                     CCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGT                                      <  SRR4302545.10602915/94‑1 (MQ=60)
                                                     CCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGT                                      <  SRR4302545.4412567/94‑1 (MQ=60)
                                                      CGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTG                                     >  SRR4302545.6636272/1‑94 (MQ=60)
                                                      CGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTG                                     >  SRR4302545.8735623/1‑94 (MQ=60)
                                                      CGCATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTG                                     >  SRR4302545.7027933/1‑94 (MQ=60)
                                                       GTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGC                                    <  SRR4302545.398920/94‑1 (MQ=60)
                                                       GTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGC                                    >  SRR4302545.9074194/1‑94 (MQ=60)
                                                       GTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGC                                    <  SRR4302545.3891703/94‑1 (MQ=60)
                                                        TATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCG                                   >  SRR4302545.10443998/1‑94 (MQ=60)
                                                        TATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCG                                   <  SRR4302545.10365788/94‑1 (MQ=60)
                                                         ATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCCCGCTCTTTCTTTGCCCGTGCGC                                  >  SRR4302545.2948583/1‑94 (MQ=60)
                                                         ATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGC                                  >  SRR4302545.8445866/1‑94 (MQ=60)
                                                         ATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGC                                  >  SRR4302545.8492326/1‑94 (MQ=60)
                                                         ATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGC                                  >  SRR4302545.10724917/1‑94 (MQ=60)
                                                         ATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGC                                  >  SRR4302545.5465167/1‑94 (MQ=60)
                                                          TTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCA                                 >  SRR4302545.5592028/1‑94 (MQ=60)
                                                           TAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCatgg                                <  SRR4302545.6603015/94‑5 (MQ=60)
                                                           TAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAG                                >  SRR4302545.8542221/1‑94 (MQ=60)
                                                           TAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAG                                >  SRR4302545.8542222/1‑94 (MQ=60)
                                                            AACTGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGC                               <  SRR4302545.5152574/94‑1 (MQ=60)
                                                            AACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGC                               >  SRR4302545.6441728/1‑94 (MQ=60)
                                                            AACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGC                               <  SRR4302545.5405268/94‑1 (MQ=60)
                                                            AACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGC                               <  SRR4302545.3206150/94‑1 (MQ=60)
                                                            AACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGC                               >  SRR4302545.6441729/1‑94 (MQ=60)
                                                            AACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGC                               >  SRR4302545.7242664/1‑94 (MQ=60)
                                                             ACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCG                              >  SRR4302545.1427822/1‑94 (MQ=60)
                                                             ACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCG                              <  SRR4302545.239194/94‑1 (MQ=60)
                                                             ACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCG                              >  SRR4302545.3075093/1‑94 (MQ=60)
                                                             ACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCG                              >  SRR4302545.3075094/1‑94 (MQ=60)
                                                              CCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGG                             >  SRR4302545.9633965/1‑94 (MQ=60)
                                                              CCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGG                             >  SRR4302545.10704308/1‑94 (MQ=60)
                                                               CGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGATAAGCAAACCCAGTCGCCACGTTCATTCTGCGCCAGCGCGCAGGGGT                            >  SRR4302545.3068391/1‑94 (MQ=40)
                                                               CGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGT                            >  SRR4302545.3021870/1‑94 (MQ=60)
                                                               CGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGT                            >  SRR4302545.1095949/1‑94 (MQ=60)
                                                                GATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTT                           >  SRR4302545.2050534/1‑94 (MQ=60)
                                                                GATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTT                           <  SRR4302545.9552288/94‑1 (MQ=60)
                                                                GATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCACGTCGCAACGCTCTTTCTGTGCCCGTGCGCAGCGGTT                           >  SRR4302545.3029270/1‑94 (MQ=60)
                                                                 ATGCGAAAAGGACAACAAGGGGGCGATTGCGAGGCGCGTGTATGACACGCAATCTTCGTCGCCACGCTCTTTCTGTTCTCGTGCGCAGCGGCTC                          >  SRR4302545.9674054/1‑94 (MQ=46)
                                                                 ATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTC                          <  SRR4302545.5198887/94‑1 (MQ=60)
                                                                 ATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGCGCGCAGCGGTTG                          >  SRR4302545.9659593/1‑94 (MQ=60)
                                                                 ATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGCCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTC                          >  SRR4302545.8406361/1‑94 (MQ=60)
                                                                  TGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCG                         >  SRR4302545.8670393/1‑94 (MQ=60)
                                                                   GCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGG                        <  SRR4302545.7854518/94‑1 (MQ=60)
                                                                   GCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTACGCAGCGGTTCGG                        >  SRR4302545.4702697/1‑94 (MQ=60)
                                                                    CGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGA                       <  SRR4302545.9131053/94‑1 (MQ=60)
                                                                    CGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGA                       <  SRR4302545.7975063/94‑1 (MQ=60)
                                                                    CGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGA                       >  SRR4302545.10634355/1‑94 (MQ=60)
                                                                    CGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCATATGACACGCAAACACCGTCGCCGCGCTCTTTCTGTGCCCGTGCGCAACGGTTCGGA                       <  SRR4302545.3821485/94‑1 (MQ=60)
                                                                     GAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAA                      >  SRR4302545.7823564/1‑94 (MQ=60)
                                                                     GAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAA                      <  SRR4302545.10210916/94‑1 (MQ=60)
                                                                     GAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGGGCGCAGCGGTTCGGAA                      >  SRR4302545.4742433/1‑94 (MQ=60)
                                                                      AAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCACGTGCGCAGCGGTTCGGAAG                     <  SRR4302545.10798685/94‑1 (MQ=60)
                                                                       AAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGT                    <  SRR4302545.4355396/94‑1 (MQ=60)
                                                                        AAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTG                   <  SRR4302545.7618874/94‑1 (MQ=60)
                                                                        AAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTG                   >  SRR4302545.7806610/1‑94 (MQ=60)
                                                                        AAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTG                   <  SRR4302545.2196214/94‑1 (MQ=60)
                                                                         AGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAGGTGG                  >  SRR4302545.2367741/1‑94 (MQ=60)
                                                                         AGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGG                  >  SRR4302545.6203004/1‑94 (MQ=60)
                                                                         AGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGG                  <  SRR4302545.1515498/94‑1 (MQ=60)
                                                                         AGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGG                  >  SRR4302545.3245390/1‑94 (MQ=60)
                                                                          GGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGG                 <  SRR4302545.4839966/94‑1 (MQ=60)
                                                                          AGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGG                 <  SRR4302545.2768363/94‑1 (MQ=60)
                                                                           GACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGACGTGGGG                >  SRR4302545.2377266/1‑94 (MQ=60)
                                                                           GACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGG                >  SRR4302545.1033189/1‑94 (MQ=60)
                                                                           GACAACAAGGCGGCGAATACGACGCGCGCGCATGACACGCAAGCCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCTGTTCGGAgggggga                >  SRR4302545.7918447/1‑87 (MQ=60)
                                                                            ACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGT               >  SRR4302545.2672816/1‑94 (MQ=60)
                                                                            ACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGT               <  SRR4302545.2629414/94‑1 (MQ=60)
                                                                            ACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGT               <  SRR4302545.5884498/94‑1 (MQ=60)
                                                                             CAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTT              <  SRR4302545.1507468/94‑1 (MQ=60)
                                                                             CAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTT              <  SRR4302545.1835327/94‑1 (MQ=60)
                                                                             CAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTT              <  SRR4302545.5580025/94‑1 (MQ=60)
                                                                              AACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTC             <  SRR4302545.10080123/94‑1 (MQ=60)
                                                                              AACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTC             >  SRR4302545.3359888/1‑94 (MQ=60)
                                                                              AACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTC             >  SRR4302545.2263641/1‑94 (MQ=60)
                                                                               ACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCC            <  SRR4302545.9349505/94‑1 (MQ=60)
                                                                               ACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCC            <  SRR4302545.9349506/94‑1 (MQ=60)
                                                                               ACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCA            <  SRR4302545.8487680/94‑1 (MQ=60)
                                                                                CAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCC           >  SRR4302545.3382298/1‑94 (MQ=60)
                                                                                CAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCC           >  SRR4302545.3965914/1‑94 (MQ=60)
                                                                                CAAGGGAGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCC           <  SRR4302545.9662726/94‑1 (MQ=60)
                                                                                 AAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCG          >  SRR4302545.9183650/1‑94 (MQ=60)
                                                                                 AAGGGAGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCG          <  SRR4302545.1104818/94‑1 (MQ=60)
                                                                                  AGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGC         <  SRR4302545.7438697/94‑1 (MQ=60)
                                                                                   GGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCA        >  SRR4302545.2552360/1‑94 (MQ=60)
                                                                                   GGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCA        <  SRR4302545.2643704/94‑1 (MQ=60)
                                                                                   GGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCA        >  SRR4302545.9180449/1‑94 (MQ=60)
                                                                                     GGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGA      >  SRR4302545.2173080/1‑94 (MQ=60)
                                                                                     GGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGA      <  SRR4302545.4891669/94‑1 (MQ=60)
                                                                                     GGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGA      >  SRR4302545.255633/1‑94 (MQ=60)
                                                                                     GGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGA      <  SRR4302545.8999033/94‑1 (MQ=60)
                                                                                      GGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAG     <  SRR4302545.3725388/94‑1 (MQ=60)
                                                                                       GCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGC    >  SRR4302545.1882089/1‑94 (MQ=60)
                                                                                        CGAATGCGAGGCGCGGGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGTAAGTGTGGTTCCCGCAGAGCC   <  SRR4302545.6118400/94‑1 (MQ=60)
                                                                                        CGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCC   <  SRR4302545.6118399/94‑1 (MQ=60)
                                                                                         GAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCCT  >  SRR4302545.3853374/1‑94 (MQ=60)
                                                                                         GAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCCT  <  SRR4302545.1444620/94‑1 (MQ=60)
                                                                                             |                                                                                         
TGGATGAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATCGGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCCT  >  NC_000913/3352161‑3352343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑