Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,352,254 2 bp→GC intergenic (‑569/‑12) yhcC ← / → gltB hypothetical protein/glutamate synthase large subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,352,2540CG100.0% 1726.0 / NA 497intergenic (‑569/‑13)yhcC/gltBhypothetical protein/glutamate synthase large subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (258/239);  total (258/239)
*NC_0009133,352,2550GC100.0% 1735.8 / NA 497intergenic (‑570/‑12)yhcC/gltBhypothetical protein/glutamate synthase large subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (258/239);  total (258/239)

Only 100 of 515 total aligned reads displayed.

GAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATCGGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCC  >  NC_000913/3352166‑3352342
                                                                                        ||                                                                                       
gAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAgg                                                                                     <  2:4057935/94‑1 (MQ=255)
 agcagcCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGgc                                                                                    <  1:804946/94‑1 (MQ=255)
 agcagcCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGgc                                                                                    <  1:6620980/94‑1 (MQ=255)
    agcCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGgcgcg                                                                                 >  1:6946486/1‑94 (MQ=255)
     gcCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGgcgcgc                                                                                <  2:88410/94‑1 (MQ=255)
      ccTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGcgcgcg                                                                               >  2:1686637/1‑94 (MQ=255)
          cTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATg                                                                           >  2:5291856/1‑94 (MQ=255)
          cTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATg                                                                           <  2:8405133/94‑1 (MQ=255)
           tcatcaTATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGa                                                                          >  2:9599093/1‑94 (MQ=255)
            catcatATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGac                                                                         >  2:5147664/1‑94 (MQ=255)
            catcatATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGac                                                                         <  1:2740379/94‑1 (MQ=255)
            catcatATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGac                                                                         >  2:2964136/1‑94 (MQ=255)
               catATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACg                                                                      <  2:6105705/94‑1 (MQ=255)
                 tatTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGGGAATGCGAGGCGCGCGTATGACACGCa                                                                    >  2:90660/1‑94 (MQ=255)
                  atTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCaa                                                                   >  2:805374/1‑94 (MQ=255)
                  atTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCaa                                                                   >  1:3763965/1‑94 (MQ=255)
                  atTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCaa                                                                   >  2:2914576/1‑94 (MQ=255)
                   tttATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCaaa                                                                  >  2:849499/1‑94 (MQ=255)
                    ttATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAAc                                                                 <  1:7192298/94‑1 (MQ=255)
                      aTGCAGTAATTGAGATCCCCTCTGCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAAccc                                                               <  1:5805924/94‑1 (MQ=255)
                       tGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAAcccc                                                              <  2:8563601/94‑1 (MQ=255)
                       tGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAAcccc                                                              <  1:1815128/94‑1 (MQ=255)
                          aGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTc                                                           <  2:2003854/94‑1 (MQ=255)
                          aGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTc                                                           >  1:9504263/1‑94 (MQ=255)
                             aaTTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGcc                                                        >  2:1814985/1‑94 (MQ=255)
                             aaTTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGcc                                                        >  2:1481445/1‑94 (MQ=255)
                              aTTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCa                                                       >  1:633164/1‑94 (MQ=255)
                                tGAGATCCCCTCTTCTCCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACg                                                     <  1:5280370/94‑1 (MQ=255)
                                tGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGCGGCGCGCGTATGACACGCAAACCCCGTCGCCACg                                                     >  2:9148453/1‑94 (MQ=255)
                                tGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACg                                                     <  1:3457788/94‑1 (MQ=255)
                                      ccccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCttt                                               >  2:5660322/1‑94 (MQ=255)
                                      ccccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCttt                                               <  2:6743540/94‑1 (MQ=255)
                                      ccccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCttt                                               <  1:10445668/94‑1 (MQ=255)
                                        ccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCt                                             <  2:4470437/94‑1 (MQ=255)
                                        ccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCt                                             <  1:7885514/94‑1 (MQ=255)
                                        ccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCt                                             >  2:7052723/1‑94 (MQ=255)
                                        ccTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCt                                             >  1:9261419/1‑94 (MQ=255)
                                         ctctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtg                                            <  2:2611356/94‑1 (MQ=255)
                                         ctctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtg                                            <  1:7426207/94‑1 (MQ=255)
                                         ctctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtg                                            >  1:9039307/1‑94 (MQ=255)
                                         ctctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtg                                            <  1:8790792/94‑1 (MQ=255)
                                         ctctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtg                                            >  1:8875040/1‑94 (MQ=255)
                                          tctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtgt                                           <  1:1894941/94‑1 (MQ=255)
                                          tctTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCtgt                                           <  2:9504263/94‑1 (MQ=255)
                                            ttCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGc                                         >  2:9426426/1‑94 (MQ=255)
                                            ttCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGc                                         <  2:2147671/94‑1 (MQ=255)
                                            ttCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGc                                         >  2:1206002/1‑94 (MQ=255)
                                             tCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGcc                                        >  1:4021685/1‑94 (MQ=255)
                                             tCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGcc                                        <  1:9682072/94‑1 (MQ=255)
                                              cACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGccc                                       >  1:10146373/1‑94 (MQ=255)
                                              cACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGccc                                       >  1:1277129/1‑94 (MQ=255)
                                               cccGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCg                                      <  2:868009/93‑1 (MQ=255)
                                                 cGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTg                                    <  2:10549219/94‑1 (MQ=255)
                                                 cGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTg                                    <  1:5971485/94‑1 (MQ=255)
                                                 cGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTg                                    >  1:605404/1‑94 (MQ=255)
                                                  gTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTgc                                   >  1:230373/1‑94 (MQ=255)
                                                   tATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTgcg                                  <  1:10067874/94‑1 (MQ=255)
                                                    aTTAACCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTgcgc                                 >  1:8253414/1‑94 (MQ=255)
                                                       aaCTGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGc                              <  1:5025204/94‑1 (MQ=255)
                                                       aaCCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGc                              >  2:1012274/1‑94 (MQ=255)
                                                        aCCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCg                             >  2:9334828/1‑94 (MQ=255)
                                                        aCCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCg                             >  2:3897610/1‑94 (MQ=255)
                                                        aCCGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCg                             >  1:3001841/1‑94 (MQ=255)
                                                          cGATGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGt                           >  1:2950077/1‑94 (MQ=255)
                                                            aTGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGCGCGCAGCGGttg                         >  1:9384182/1‑93 (MQ=255)
                                                             tGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCg                        >  1:8426670/1‑94 (MQ=255)
                                                             tGCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCg                        <  1:383191/94‑1 (MQ=255)
                                                              gCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCgg                       <  1:7638357/94‑1 (MQ=255)
                                                              gCGAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCgg                       >  2:2453307/1‑94 (MQ=255)
                                                                gAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGaa                     >  2:7745206/1‑94 (MQ=255)
                                                                gAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGaa                     >  2:4810958/1‑94 (MQ=255)
                                                                gAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGaa                     <  1:9916372/94‑1 (MQ=255)
                                                                gAAAAGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGGGCGCAGCGGTTCGGaa                     >  1:4624191/1‑94 (MQ=255)
                                                                  aaaGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGt                   <  2:6893086/94‑1 (MQ=255)
                                                                  aaaGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGt                   <  1:4248987/94‑1 (MQ=255)
                                                                   aaGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTg                  >  1:853510/1‑94 (MQ=255)
                                                                    aGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTgg                 <  2:5942557/94‑1 (MQ=255)
                                                                    aGGACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTgg                 >  1:3167592/1‑94 (MQ=255)
                                                                     ggACAACAAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTggg                <  1:10370529/94‑1 (MQ=255)
                                                                       acaacaAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGt              <  1:2567550/94‑1 (MQ=255)
                                                                       acaacaAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGt              <  2:6360737/94‑1 (MQ=255)
                                                                       acaacaAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGt              >  2:423793/1‑94 (MQ=255)
                                                                       acaacaAGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGt              >  2:7601854/1‑94 (MQ=255)
                                                                        caacaaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGtt             <  1:1473582/94‑1 (MQ=255)
                                                                        caacaaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGtt             <  2:3422137/94‑1 (MQ=255)
                                                                        caacaaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGtt             <  1:5437792/94‑1 (MQ=255)
                                                                          acaaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGACGTGGGGTTcc           >  2:6587902/1‑94 (MQ=255)
                                                                          acaaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTcc           >  2:1890099/1‑94 (MQ=255)
                                                                           catgggggCTAATGTGAGGCGCGCGTATGACAGGCAAACCCCGTCGCCACGCTATTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTccc          <  2:4332303/91‑1 (MQ=255)
                                                                           caaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTccc          >  2:7311670/1‑94 (MQ=255)
                                                                            aaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCg         <  2:10373573/94‑1 (MQ=255)
                                                                            aaGGGGGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCg         <  2:5413165/94‑1 (MQ=255)
                                                                            aaGGGAGCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCg         <  1:1081381/94‑1 (MQ=255)
                                                                                gggCGAATGCGAGGCGCGCGTATGCCACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCaga     >  2:3063979/1‑94 (MQ=255)
                                                                                gggCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCaga     >  1:2121016/1‑94 (MQ=255)
                                                                                 ggCGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCagag    <  1:3636631/94‑1 (MQ=255)
                                                                                 gccGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCagag    <  1:2468986/92‑1 (MQ=255)
                                                                                   cGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGcc  <  1:6503398/94‑1 (MQ=255)
                                                                                   cGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGcc  >  2:3646779/1‑94 (MQ=255)
                                                                                   cGAATGCGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGcc  >  2:4516124/1‑94 (MQ=255)
                                                                                        ||                                                                                       
GAGCAGCCTGCTCATCATATTTATGCAGTAATTGAGATCCCCTCTTCACCGTATTAACCGATGCGAAAAGGACAACAAGGGGGCGAATCGGAGGCGCGCGTATGACACGCAAACCCCGTCGCCACGCTCTTTCTGTGCCCGTGCGCAGCGGTTCGGAAGTGGGGTTCCCGCAGAGCC  >  NC_000913/3352166‑3352342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 331 total aligned reads displayed.
CATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGTTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTACAC  >  NC_000913/3359722‑3359907
                                                                                            |                                                                                             
CATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCT                                                                                              >  SRR4302545.2830700/1‑94 (MQ=60)
CATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCT                                                                                              <  SRR4302545.5421897/94‑1 (MQ=60)
CATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCT                                                                                              <  SRR4302545.5421892/94‑1 (MQ=60)
CATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCT                                                                                              >  SRR4302545.6499726/1‑94 (MQ=60)
 ATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTC                                                                                             <  SRR4302545.4712588/94‑1 (MQ=60)
 ATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTC                                                                                             >  SRR4302545.2016440/1‑94 (MQ=60)
 ATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTC                                                                                             <  SRR4302545.5287611/94‑1 (MQ=60)
 ATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTC                                                                                             >  SRR4302545.5633555/1‑94 (MQ=60)
 ATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTC                                                                                             <  SRR4302545.1324877/94‑1 (MQ=60)
  TTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCC                                                                                            <  SRR4302545.3230813/94‑1 (MQ=60)
  TTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCC                                                                                            <  SRR4302545.360444/94‑1 (MQ=60)
  TTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCC                                                                                            >  SRR4302545.8011390/1‑94 (MQ=60)
   TATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCT                                                                                           <  SRR4302545.4249845/94‑1 (MQ=60)
   TATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCT                                                                                           >  SRR4302545.3867571/1‑94 (MQ=60)
    ATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTG                                                                                          >  SRR4302545.683354/1‑94 (MQ=60)
    ATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTG                                                                                          <  SRR4302545.1163878/94‑1 (MQ=60)
     TTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGA                                                                                         <  SRR4302545.10519279/94‑1 (MQ=60)
     TTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGA                                                                                         <  SRR4302545.8158904/94‑1 (MQ=60)
     TTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGA                                                                                         >  SRR4302545.137458/1‑94 (MQ=60)
     TTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGA                                                                                         >  SRR4302545.7115392/1‑94 (MQ=60)
      TACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAA                                                                                        >  SRR4302545.9492938/1‑94 (MQ=60)
       ACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAA                                                                                       >  SRR4302545.3057853/1‑94 (MQ=60)
       ACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAA                                                                                       >  SRR4302545.5899370/1‑94 (MQ=60)
       ACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAA                                                                                       >  SRR4302545.2884165/1‑94 (MQ=60)
       ACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAA                                                                                       >  SRR4302545.1721330/1‑94 (MQ=60)
         AGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACA                                                                                     <  SRR4302545.946015/94‑1 (MQ=60)
         AGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACA                                                                                     >  SRR4302545.2408303/1‑94 (MQ=60)
         AGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACA                                                                                     <  SRR4302545.6395395/94‑1 (MQ=60)
         AGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACA                                                                                     >  SRR4302545.8763506/1‑94 (MQ=60)
         AGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACA                                                                                     >  SRR4302545.668106/1‑94 (MQ=60)
          GGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACAT                                                                                    <  SRR4302545.7402595/94‑1 (MQ=60)
          GGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACAT                                                                                    <  SRR4302545.2328952/94‑1 (MQ=60)
          GGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACAT                                                                                    >  SRR4302545.1031380/1‑94 (MQ=60)
           GAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATC                                                                                   >  SRR4302545.4069908/1‑94 (MQ=60)
            AGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCA                                                                                  >  SRR4302545.4993434/1‑94 (MQ=60)
            AGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCA                                                                                  >  SRR4302545.1892025/1‑94 (MQ=60)
            AGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCA                                                                                  >  SRR4302545.3838739/1‑94 (MQ=60)
            AGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCA                                                                                  <  SRR4302545.6322724/94‑1 (MQ=60)
            AGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCA                                                                                  <  SRR4302545.7419447/94‑1 (MQ=60)
            AGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCA                                                                                  >  SRR4302545.10683059/1‑94 (MQ=60)
             GTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAG                                                                                 <  SRR4302545.3034350/94‑1 (MQ=60)
             GTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAG                                                                                 >  SRR4302545.8372606/1‑94 (MQ=60)
             GTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAG                                                                                 >  SRR4302545.2400002/1‑94 (MQ=60)
             GTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAG                                                                                 <  SRR4302545.6951028/94‑1 (MQ=60)
              TTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGT                                                                                <  SRR4302545.7458371/94‑1 (MQ=60)
               TTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCTCAGGGATGGCTCCTGAAACATCAGTA                                                                               >  SRR4302545.5320859/1‑94 (MQ=60)
               TTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTA                                                                               >  SRR4302545.8374335/1‑94 (MQ=60)
               TTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTA                                                                               <  SRR4302545.6763061/94‑1 (MQ=60)
                TTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTAT                                                                              >  SRR4302545.5062915/1‑94 (MQ=60)
                TTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTAT                                                                              <  SRR4302545.649486/94‑1 (MQ=60)
                TTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTAT                                                                              >  SRR4302545.2053293/1‑94 (MQ=60)
                 TAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATT                                                                             >  SRR4302545.2742178/1‑94 (MQ=60)
                 TAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATT                                                                             >  SRR4302545.6327617/1‑94 (MQ=60)
                 TAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATT                                                                             <  SRR4302545.3300008/94‑1 (MQ=60)
                 TAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATT                                                                             <  SRR4302545.7250765/94‑1 (MQ=60)
                  AATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTG                                                                            >  SRR4302545.7823972/1‑94 (MQ=60)
                  AATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTG                                                                            <  SRR4302545.5309892/94‑1 (MQ=60)
                  AATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTG                                                                            <  SRR4302545.9468744/94‑1 (MQ=60)
                  AATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTG                                                                            <  SRR4302545.7745371/94‑1 (MQ=60)
                    TTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCT                                                                          <  SRR4302545.4400052/94‑1 (MQ=60)
                    TTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCT                                                                          >  SRR4302545.257304/1‑94 (MQ=60)
                      TAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGG                                                                        >  SRR4302545.9586316/1‑94 (MQ=60)
                       AAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGT                                                                       <  SRR4302545.8895529/94‑1 (MQ=60)
                        AATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTT                                                                      >  SRR4302545.10017544/1‑94 (MQ=60)
                        AATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTT                                                                      <  SRR4302545.4198897/94‑1 (MQ=60)
                        AATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTT                                                                      >  SRR4302545.2803429/1‑94 (MQ=60)
                        AATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTT                                                                      >  SRR4302545.9059820/1‑94 (MQ=60)
                           GCTCAGACACATTCCATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGAT                                                                   >  SRR4302545.2970180/1‑94 (MQ=60)
                           GCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGAT                                                                   >  SRR4302545.2970181/1‑94 (MQ=60)
                            CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATG                                                                  <  SRR4302545.5773609/94‑1 (MQ=60)
                            CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATG                                                                  <  SRR4302545.8820639/94‑1 (MQ=60)
                             TCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCCGTATTGCTGGTTGATGA                                                                 >  SRR4302545.2270632/1‑94 (MQ=60)
                             TCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGA                                                                 >  SRR4302545.1916733/1‑94 (MQ=60)
                             TCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGA                                                                 >  SRR4302545.8882827/1‑94 (MQ=60)
                             TCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGA                                                                 <  SRR4302545.9730354/94‑1 (MQ=60)
                              CAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAA                                                                <  SRR4302545.7871141/94‑1 (MQ=60)
                               AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAA                                                               >  SRR4302545.7172313/1‑94 (MQ=60)
                               AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAA                                                               <  SRR4302545.4777623/94‑1 (MQ=60)
                               AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAA                                                               >  SRR4302545.6401894/1‑94 (MQ=60)
                                GACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAA                                                              >  SRR4302545.4157958/1‑94 (MQ=60)
                                GACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAA                                                              <  SRR4302545.6733655/94‑1 (MQ=60)
                                 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAG                                                             <  SRR4302545.3530077/94‑1 (MQ=60)
                                  CACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGC                                                            >  SRR4302545.3113585/1‑94 (MQ=60)
                                  CACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGC                                                            >  SRR4302545.4266908/1‑94 (MQ=60)
                                   ACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCG                                                           >  SRR4302545.489113/1‑94 (MQ=60)
                                   ACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCG                                                           >  SRR4302545.5334310/1‑94 (MQ=60)
                                   ACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCG                                                           >  SRR4302545.3165761/1‑94 (MQ=60)
                                   ACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCG                                                           <  SRR4302545.6936458/94‑1 (MQ=60)
                                   ACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCG                                                           <  SRR4302545.2300352/94‑1 (MQ=60)
                                   ACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCG                                                           >  SRR4302545.10794651/1‑94 (MQ=60)
                                    CATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGT                                                          <  SRR4302545.50394/94‑1 (MQ=60)
                                     ATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTG                                                         <  SRR4302545.5301849/94‑1 (MQ=60)
                                     ATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTG                                                         <  SRR4302545.5706442/94‑1 (MQ=60)
                                     ATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTG                                                         <  SRR4302545.19274/94‑1 (MQ=60)
                                     ATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTG                                                         >  SRR4302545.5072648/1‑94 (MQ=60)
                                     ATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTG                                                         <  SRR4302545.7165964/94‑1 (MQ=60)
                                     ATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTG                                                         <  SRR4302545.6785080/94‑1 (MQ=60)
                                      TTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGG                                                        >  SRR4302545.3634132/1‑94 (MQ=60)
                                       TACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGT                                                       >  SRR4302545.9914670/1‑94 (MQ=60)
                                       TACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGT                                                       >  SRR4302545.10371778/1‑94 (MQ=60)
                                        TCATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTG                                                      <  SRR4302545.8588976/94‑1 (MQ=60)
                                        ACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTG                                                      >  SRR4302545.4704814/1‑94 (MQ=60)
                                         CATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGA                                                     >  SRR4302545.7770056/1‑94 (MQ=60)
                                         CATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGA                                                     <  SRR4302545.1725659/94‑1 (MQ=60)
                                         CATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGA                                                     >  SRR4302545.7673713/1‑94 (MQ=60)
                                          ATTCTCTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAA                                                    <  SRR4302545.9621703/94‑1 (MQ=60)
                                          ATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAA                                                    <  SRR4302545.4752333/94‑1 (MQ=60)
                                          ATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAA                                                    <  SRR4302545.4698377/94‑1 (MQ=60)
                                           TTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAG                                                   >  SRR4302545.249877/1‑94 (MQ=60)
                                           TTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAG                                                   >  SRR4302545.4605930/1‑94 (MQ=60)
                                            TCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGC                                                  >  SRR4302545.10730042/1‑94 (MQ=60)
                                             CACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCT                                                 >  SRR4302545.3950908/1‑94 (MQ=60)
                                             CACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCT                                                 >  SRR4302545.459902/1‑94 (MQ=60)
                                              ACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTA                                                <  SRR4302545.9264554/94‑1 (MQ=60)
                                              ACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTA                                                >  SRR4302545.6202745/1‑94 (MQ=60)
                                              ACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTA                                                <  SRR4302545.7846044/94‑1 (MQ=60)
                                               cctgtattaaaaaaaacataaatgaatcccTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAG                                               <  SRR4302545.6370688/64‑1 (MQ=60)
                                               CTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAG                                               <  SRR4302545.3373606/94‑1 (MQ=60)
                                               CTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAG                                               <  SRR4302545.201941/94‑1 (MQ=60)
                                                TGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGT                                              >  SRR4302545.2344433/1‑94 (MQ=60)
                                                 GTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTA                                             >  SRR4302545.6883881/1‑94 (MQ=60)
                                                 GTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTA                                             >  SRR4302545.5440674/1‑94 (MQ=60)
                                                 GTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTA                                             >  SRR4302545.1245721/1‑94 (MQ=60)
                                                 GTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTA                                             >  SRR4302545.1245722/1‑94 (MQ=60)
                                                 GTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTA                                             >  SRR4302545.1476248/1‑94 (MQ=60)
                                                 GTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTA                                             <  SRR4302545.9407788/94‑1 (MQ=60)
                                                  TATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTAT                                            >  SRR4302545.6153195/1‑94 (MQ=60)
                                                  TATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTAT                                            <  SRR4302545.9131616/94‑1 (MQ=60)
                                                   ATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATT                                           <  SRR4302545.289717/94‑1 (MQ=60)
                                                   ATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATT                                           <  SRR4302545.1692948/94‑1 (MQ=60)
                                                    TTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTA                                          >  SRR4302545.346530/1‑94 (MQ=60)
                                                     TTATAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAA                                         >  SRR4302545.5810350/1‑94 (MQ=60)
                                                      TATAACAACATCAATGAATACCTTACCGACAGGTTAGGCTCCTGAAACATCAGCATTGATGGTTGATGAAAACCGGGGTGAAGCTAGGATTAAT                                        >  SRR4302545.9303526/1‑94 (MQ=32)
                                                        TAACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATAT                                      >  SRR4302545.4647882/1‑94 (MQ=60)
                                                         AACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGCGAAGCTAGTATTAATATT                                     >  SRR4302545.567586/1‑94 (MQ=60)
                                                          ACAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTA                                    <  SRR4302545.9571857/94‑1 (MQ=60)
                                                           CAACATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAA                                   <  SRR4302545.3751662/94‑1 (MQ=60)
                                                              CATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAA                                <  SRR4302545.8473070/94‑1 (MQ=60)
                                                              CATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAA                                >  SRR4302545.8494921/1‑94 (MQ=60)
                                                              CATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAA                                <  SRR4302545.9745627/94‑1 (MQ=60)
                                                              CATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAA                                >  SRR4302545.1780361/1‑94 (MQ=60)
                                                               ATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAAT                               >  SRR4302545.5137455/1‑94 (MQ=60)
                                                               ATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAAT                               <  SRR4302545.1257044/94‑1 (MQ=60)
                                                               ATCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAAT                               >  SRR4302545.3416704/1‑94 (MQ=60)
                                                                TCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATA                              <  SRR4302545.9600307/94‑1 (MQ=60)
                                                                TCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATA                              <  SRR4302545.7925065/94‑1 (MQ=60)
                                                                TCAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATA                              <  SRR4302545.5997477/94‑1 (MQ=60)
                                                                ACAATGAATACCTTAGCCACAGGGATGGCTCTTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATA                              <  SRR4302545.84617/94‑1 (MQ=60)
                                                                 CAATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAGGCTAGTATTAATATTAAGAATAC                             >  SRR4302545.9203031/1‑94 (MQ=60)
                                                                  AATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACA                            <  SRR4302545.4828560/94‑1 (MQ=60)
                                                                   ATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAG                           <  SRR4302545.6973479/94‑1 (MQ=60)
                                                                   ATGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAG                           <  SRR4302545.2586197/94‑1 (MQ=60)
                                                                    TGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGA                          <  SRR4302545.5919206/94‑1 (MQ=60)
                                                                    TGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGA                          >  SRR4302545.7711336/1‑94 (MQ=60)
                                                                    TGAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGA                          >  SRR4302545.6173291/1‑94 (MQ=60)
                                                                     GAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGAT                         >  SRR4302545.8031040/1‑94 (MQ=60)
                                                                     GAATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGAT                         <  SRR4302545.8997787/94‑1 (MQ=60)
                                                                      AATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATG                        >  SRR4302545.7568501/1‑94 (MQ=60)
                                                                      AATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATG                        <  SRR4302545.1489085/94‑1 (MQ=60)
                                                                      AATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATG                        <  SRR4302545.7777691/94‑1 (MQ=60)
                                                                       ATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTCTTAATATTAAGAATACAGATGA                       >  SRR4302545.10022791/1‑94 (MQ=60)
                                                                       ATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGA                       <  SRR4302545.5323726/94‑1 (MQ=60)
                                                                       ATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGA                       >  SRR4302545.6971407/1‑94 (MQ=60)
                                                                       ATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGA                       >  SRR4302545.2147293/1‑94 (MQ=60)
                                                                       ATACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGA                       >  SRR4302545.3141940/1‑94 (MQ=60)
                                                                        TACCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGAT                      <  SRR4302545.10295532/94‑1 (MQ=60)
                                                                          CCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGACTACAGATGATCA                    >  SRR4302545.8806858/1‑94 (MQ=60)
                                                                          CCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCA                    >  SRR4302545.4185234/1‑94 (MQ=60)
                                                                          CCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCA                    <  SRR4302545.1588846/94‑1 (MQ=60)
                                                                          CCTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTAATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCA                    <  SRR4302545.10122968/94‑1 (MQ=60)
                                                                           CTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCAT                   >  SRR4302545.4661665/1‑94 (MQ=60)
                                                                           CTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCAT                   >  SRR4302545.5527578/1‑94 (MQ=60)
                                                                           CTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCAT                   >  SRR4302545.9781241/1‑94 (MQ=60)
                                                                           CTTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCAT                   >  SRR4302545.3622532/1‑94 (MQ=60)
                                                                            TTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATC                  <  SRR4302545.1793664/94‑1 (MQ=60)
                                                                            TTAGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATC                  >  SRR4302545.2911438/1‑94 (MQ=60)
                                                                              AGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGGAGCTAGGATTAATATTAAAAATAAAGATGATCATCCT                >  SRR4302545.10622159/1‑94 (MQ=60)
                                                                              AGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCT                >  SRR4302545.6731662/1‑94 (MQ=60)
                                                                              AGCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCT                <  SRR4302545.10046056/94‑1 (MQ=60)
                                                                               GCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTT               <  SRR4302545.1536375/94‑1 (MQ=60)
                                                                               GCCACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTT               <  SRR4302545.8330934/94‑1 (MQ=60)
                                                                               GCCACAGGGATGGCTCCTGAAACATCAGTATTCCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTT               >  SRR4302545.3593015/1‑94 (MQ=60)
                                                                                 CACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGTTCATCCTTCA             >  SRR4302545.612499/1‑94 (MQ=60)
                                                                                 CACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCA             >  SRR4302545.7585625/1‑94 (MQ=60)
                                                                                 CACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCA             <  SRR4302545.5639365/94‑1 (MQ=60)
                                                                                 CACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCA             >  SRR4302545.8839668/1‑94 (MQ=60)
                                                                                  ACAGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCAT            <  SRR4302545.7658037/94‑1 (MQ=60)
                                                                                    AGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAGGAATACAGATGATCATCCTTCATTG          <  SRR4302545.10450682/94‑1 (MQ=60)
                                                                                    AGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGGATACAGATGATCATCCTTCATTG          >  SRR4302545.5972194/1‑94 (MQ=60)
                                                                                    AGGGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTG          <  SRR4302545.388383/94‑1 (MQ=60)
                                                                                      GGATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCT        >  SRR4302545.4946118/1‑94 (MQ=60)
                                                                                       GATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTT       <  SRR4302545.280998/94‑1 (MQ=60)
                                                                                       GATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTT       <  SRR4302545.10263807/94‑1 (MQ=60)
                                                                                       GATGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTT       <  SRR4302545.1324430/94‑1 (MQ=60)
                                                                                         TGGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTA     <  SRR4302545.1146709/94‑1 (MQ=60)
                                                                                          GGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACATATGATCATCCTTCATTGCTTTAC    >  SRR4302545.5985055/1‑94 (MQ=60)
                                                                                          GGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTAC    <  SRR4302545.6442545/94‑1 (MQ=60)
                                                                                          GGCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTAC    <  SRR4302545.1127711/94‑1 (MQ=60)
                                                                                           GCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTACA   <  SRR4302545.955762/94‑1 (MQ=60)
                                                                                           GCTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTACA   <  SRR4302545.5918217/94‑1 (MQ=60)
                                                                                            |                                                                                             
CATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGTTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTACAC  >  NC_000913/3359722‑3359907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑