Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,393,106 Δ1 bp intergenic (‑3443/+857) tldD ← / ← cafA TldD/CafA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,393,1030T.99.8% 1932.1 / ‑3.4 423intergenic (‑3440/+860)tldD/cafATldD/CafA
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base . (220/202);  total (220/203)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 477 total aligned reads displayed.

CCAGCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGTTTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCAATAT  >  NC_000913/3393010‑3393192
                                                                                             |                                                                                         
ccAGCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGt                                                                                           >  2:4978714/1‑94 (MQ=255)
 cAGCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtt                                                                                          >  2:6077930/1‑94 (MQ=255)
 cAGCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtt                                                                                          <  1:4049593/94‑1 (MQ=255)
 cAGCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtt                                                                                          >  2:3070224/1‑94 (MQ=255)
 cAGCCCGGAGTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtt                                                                                          <  2:1139331/94‑1 (MQ=255)
   gCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttc                                                                                        >  2:5303719/1‑93 (MQ=255)
    cccGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttca                                                                                       <  2:8928519/94‑3 (MQ=255)
    cccGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttca                                                                                       >  1:955899/1‑92 (MQ=255)
    cccGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttca                                                                                       <  1:2960483/94‑3 (MQ=255)
    cccGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttca                                                                                       >  2:5991298/1‑92 (MQ=255)
     ccGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttcag                                                                                      >  2:53657/1‑91 (MQ=255)
     ccGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGtttcag                                                                                      <  1:9188514/94‑4 (MQ=255)
       ggATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGcc                                                                                   >  1:2004820/1‑94 (MQ=255)
       ggATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGcc                                                                                   >  1:6315080/1‑94 (MQ=255)
       ggATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGcc                                                                                   >  2:4585791/1‑94 (MQ=255)
        gATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCa                                                                                  >  2:5470725/1‑94 (MQ=255)
         aTTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAg                                                                                 <  1:7855037/94‑1 (MQ=255)
         aTTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAg                                                                                 <  1:6024292/94‑1 (MQ=255)
         aTTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAg                                                                                 <  2:3965957/94‑1 (MQ=255)
         aTTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAg                                                                                 <  1:2463026/94‑1 (MQ=255)
         aTTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAg                                                                                 <  1:1521134/94‑1 (MQ=255)
           tttCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGAc                                                                               >  2:4104408/1‑94 (MQ=255)
           tttCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGAc                                                                               <  1:8842673/94‑1 (MQ=255)
               aCGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCa                                                                           <  1:9917085/94‑1 (MQ=255)
                cgcgTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAc                                                                          <  2:8168151/94‑1 (MQ=255)
                cgcgTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAc                                                                          >  1:10624081/1‑94 (MQ=255)
                 gcgTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAcc                                                                         <  2:6958274/94‑1 (MQ=255)
                  cgTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccg                                                                        <  2:4886046/94‑1 (MQ=255)
                  cgTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccg                                                                        >  1:6824579/1‑94 (MQ=255)
                   gTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccgc                                                                       >  1:1453305/1‑94 (MQ=255)
                    tAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccgcc                                                                      >  1:4415760/1‑94 (MQ=255)
                    tAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccgcc                                                                      >  1:4724896/1‑94 (MQ=255)
                    tAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccgcc                                                                      >  2:1721486/1‑94 (MQ=255)
                     aaTATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCAccgccg                                                                     >  2:3544791/1‑94 (MQ=255)
                      atatGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCgg                                                                    >  2:442509/1‑94 (MQ=255)
                        atGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGtt                                                                  <  2:2199704/94‑1 (MQ=255)
                        atGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGACACCGCCGGtt                                                                  >  1:3418131/1‑94 (MQ=255)
                           cgcgGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACa                                                               >  1:4907996/1‑94 (MQ=255)
                            gcgGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACAt                                                              <  2:8408831/94‑1 (MQ=255)
                             cgGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATc                                                             >  1:2599449/1‑94 (MQ=255)
                             cgGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATc                                                             >  1:5261000/1‑94 (MQ=255)
                                 cAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCt                                                         <  1:8738495/94‑1 (MQ=255)
                                  aGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCtt                                                        <  1:5055853/94‑1 (MQ=255)
                                   gATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATTGCCttt                                                       <  1:10525298/94‑1 (MQ=255)
                                   gATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCttt                                                       <  2:8887101/94‑1 (MQ=255)
                                     ttATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGt                                                     <  2:8678188/94‑1 (MQ=255)
                                     ttATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGt                                                     >  2:8509220/1‑94 (MQ=255)
                                      tATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTc                                                    >  1:4271282/1‑94 (MQ=255)
                                       aTCCACCGACAGCGTATGCGTTTGCTTCTCGCACAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCg                                                   >  2:10118549/1‑94 (MQ=255)
                                         ccACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGAt                                                 >  2:9568549/1‑94 (MQ=255)
                                          cACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATc                                                <  2:2099869/94‑1 (MQ=255)
                                           aCCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCg                                               >  1:5428257/1‑94 (MQ=255)
                                               aCAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCAt                                           >  2:7458677/1‑94 (MQ=255)
                                                cAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATc                                          >  1:7526691/1‑94 (MQ=255)
                                                cAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATc                                          >  2:581093/1‑94 (MQ=255)
                                                  gCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCa                                        <  2:4736062/94‑1 (MQ=255)
                                                   cGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAg                                       <  1:715872/94‑1 (MQ=255)
                                                   cGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAg                                       >  1:3586573/1‑94 (MQ=255)
                                                   cGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAg                                       >  1:9334880/1‑94 (MQ=255)
                                                   cGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACAACGCCTTTGTCGATCGTCATCCAg                                       >  1:5838025/1‑94 (MQ=255)
                                                    gtttGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTCCATCGCCTTTGTCGATCGTCATCCAGc                                      <  1:9409334/91‑1 (MQ=255)
                                                     tATGCTTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGcc                                     <  1:7430128/94‑1 (MQ=255)
                                                     tATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGcc                                     >  2:10003763/1‑94 (MQ=255)
                                                      aTGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCt                                    >  2:2309070/1‑94 (MQ=255)
                                                        gCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAACCTTc                                  >  1:2197853/1‑94 (MQ=255)
                                                         cGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCa                                 >  2:5624629/1‑94 (MQ=255)
                                                          gTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCag                                >  2:7999162/1‑93 (MQ=255)
                                                            ttGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAgg                              <  2:3333733/94‑1 (MQ=255)
                                                            ttGCTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAgg                              >  2:6399654/1‑94 (MQ=255)
                                                            ttGCTTCTCGCCCAACCAGCGGGCACCGCCCTG‑GTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCAGCCAGCCTTCAAgg                              >  2:9415935/1‑94 (MQ=255)
                                                              tcTTCTCGCCCAACCAGCTGGCCCCGCCCTG‑TTTCAGCCAGACGTCCCCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGga                            <  1:2122737/93‑1 (MQ=255)
                                                               cTTCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGgag                           >  2:3788782/1‑94 (MQ=255)
                                                                ttCTCGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGgaga                          >  2:7944648/1‑94 (MQ=255)
                                                                 tctcGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGaa                         <  2:2585504/94‑1 (MQ=255)
                                                                 tctcGCCCAACCAGCGTGCCCCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGaa                         <  1:7009329/94‑1 (MQ=255)
                                                                  ctcGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAAc                        <  2:2386869/94‑1 (MQ=255)
                                                                   tcGCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCCGCCTTCAAGGGAGAACt                       >  1:9286068/1‑94 (MQ=255)
                                                                     gCCCAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACtgt                     >  2:2831512/1‑94 (MQ=255)
                                                                     ccccAACCAGCTCGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGTTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACtgt                     <  1:7648720/93‑1 (MQ=255)
                                                                      cccAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACtgtg                    <  2:8766884/94‑1 (MQ=255)
                                                                      cccAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACtgtg                    >  2:199750/1‑94 (MQ=255)
                                                                      cccAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACtgtg                    >  2:7091810/1‑94 (MQ=255)
                                                                       ccAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTTGATCGTCATCCAGCCTTCAAGGGAGAACTGTGc                   >  2:10532537/1‑94 (MQ=255)
                                                                       ccAACCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGc                   >  2:7541276/1‑94 (MQ=255)
                                                                          aCCCGCTGGCACCGCCCTG‑GTTCAGCCAGGCGGCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGt                <  1:4499271/94‑1 (MQ=255)
                                                                          aCCAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGt                >  1:6560942/1‑94 (MQ=255)
                                                                           ccAGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGtt               >  2:6776437/1‑94 (MQ=255)
                                                                             aGCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTc             >  2:1588280/1‑94 (MQ=255)
                                                                              gCTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTcc            <  2:10418398/94‑1 (MQ=255)
                                                                               cTGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCa           <  1:1817324/94‑1 (MQ=255)
                                                                                tGGCACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAg          <  2:6638993/94‑1 (MQ=255)
                                                                                   cACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAgcgc       <  2:7251089/94‑1 (MQ=255)
                                                                                   cACCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAgcgc       <  1:10018558/94‑1 (MQ=255)
                                                                                    aCCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCa      <  1:1293995/94‑1 (MQ=255)
                                                                                    aCCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCa      >  1:5714511/1‑94 (MQ=255)
                                                                                    aCCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCa      >  1:2819509/1‑94 (MQ=255)
                                                                                    aCCGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCATTCAAGGGAGAACTGGGCCGTTTCCAGCGCa      >  2:9085815/1‑94 (MQ=255)
                                                                                     ccGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCaa     >  1:1019913/1‑94 (MQ=255)
                                                                                     ccGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCaa     <  2:3205076/94‑1 (MQ=255)
                                                                                      cGCCCTG‑TTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCAat    <  1:8122695/94‑1 (MQ=255)
                                                                                             |                                                                                         
CCAGCCCGGATTTTCACGCGTAATATGCGCGGTCAGATTATCCACCGACAGCGTATGCGTTTGCTTCTCGCCCAACCAGCTGGCACCGCCCTGTTTTCAGCCAGACGTCACCGCCGGTTACATCGCCTTTGTCGATCGTCATCCAGCCTTCAAGGGAGAACTGTGCCGTTTCCAGCGCAATAT  >  NC_000913/3393010‑3393192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 289 total aligned reads displayed.
CTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATACC  >  NC_000913/3395183‑3395369
                                                                                             |                                                                                             
CTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCAC                                                                                               >  SRR4302545.6965426/1‑94 (MQ=60)
 TTCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACA                                                                                              <  SRR4302545.6283891/94‑1 (MQ=60)
  cccCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACAC                                                                                             <  SRR4302545.9883312/91‑1 (MQ=60)
   CACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCTAATATCTACAAAAGCCGCCTGCACACC                                                                                            <  SRR4302545.6989972/94‑1 (MQ=60)
   CACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACC                                                                                            >  SRR4302545.8346088/1‑94 (MQ=60)
    CCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           <  SRR4302545.6848664/94‑1 (MQ=60)
    ACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           >  SRR4302545.9599407/1‑94 (MQ=60)
    ACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           >  SRR4302545.1665712/1‑94 (MQ=60)
    ACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           >  SRR4302545.8462447/1‑94 (MQ=60)
    ACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           >  SRR4302545.8192615/1‑94 (MQ=60)
    ACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           >  SRR4302545.1096165/1‑94 (MQ=60)
    ACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCC                                                                                           >  SRR4302545.10653071/1‑94 (MQ=60)
     CCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCG                                                                                          <  SRR4302545.1361008/94‑1 (MQ=60)
     CCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCG                                                                                          >  SRR4302545.3366578/1‑94 (MQ=60)
      CCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGG                                                                                         >  SRR4302545.1576502/1‑94 (MQ=60)
      CCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGG                                                                                         >  SRR4302545.10172445/1‑94 (MQ=60)
      CCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGG                                                                                         <  SRR4302545.6520087/94‑1 (MQ=60)
       CGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGA                                                                                        >  SRR4302545.10561733/1‑94 (MQ=60)
        GCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACGCCCGGAA                                                                                       <  SRR4302545.5202686/94‑1 (MQ=60)
        GCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAA                                                                                       >  SRR4302545.72120/1‑94 (MQ=60)
        GCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAA                                                                                       >  SRR4302545.3374149/1‑94 (MQ=60)
        GCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAA                                                                                       <  SRR4302545.2234849/94‑1 (MQ=60)
         CCACACATTCGGTGTGCGGCATGCTGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAG                                                                                      <  SRR4302545.6008695/94‑1 (MQ=60)
         CCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAG                                                                                      >  SRR4302545.9830991/1‑94 (MQ=60)
         CCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAG                                                                                      <  SRR4302545.3818098/94‑1 (MQ=60)
          CACCCATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGT                                                                                     <  SRR4302545.5746376/94‑1 (MQ=60)
          CACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGT                                                                                     >  SRR4302545.7665788/1‑94 (MQ=60)
          CACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGT                                                                                     >  SRR4302545.5587550/1‑94 (MQ=60)
            CACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTAC                                                                                   <  SRR4302545.2949816/94‑1 (MQ=60)
            CACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTAC                                                                                   >  SRR4302545.2539568/1‑94 (MQ=60)
              CATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACAC                                                                                 >  SRR4302545.4741699/1‑94 (MQ=60)
               ATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACG                                                                                >  SRR4302545.8577774/1‑94 (MQ=60)
               ATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACG                                                                                >  SRR4302545.1236379/1‑94 (MQ=60)
               ATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACG                                                                                <  SRR4302545.4709290/94‑1 (MQ=60)
               ATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACG                                                                                <  SRR4302545.10433762/94‑1 (MQ=60)
                TGCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGA                                                                               >  SRR4302545.6647786/1‑94 (MQ=60)
                 TCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGAC                                                                              <  SRR4302545.4306688/94‑1 (MQ=60)
                 TCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGAC                                                                              <  SRR4302545.3873102/94‑1 (MQ=60)
                 TCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGAC                                                                              >  SRR4302545.414486/1‑94 (MQ=60)
                  CGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACT                                                                             >  SRR4302545.5920125/1‑94 (MQ=60)
                  CGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACT                                                                             >  SRR4302545.3139062/1‑94 (MQ=60)
                  CGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACT                                                                             >  SRR4302545.7925717/1‑94 (MQ=60)
                  CGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACT                                                                             <  SRR4302545.2714156/94‑1 (MQ=60)
                   GGTGTGCGGCCTGATGGCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTT                                                                            <  SRR4302545.10500476/94‑1 (MQ=60)
                   GGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTT                                                                            <  SRR4302545.10929726/94‑1 (MQ=60)
                   GGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTT                                                                            >  SRR4302545.5927359/1‑94 (MQ=60)
                   GGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTT                                                                            <  SRR4302545.6249127/94‑1 (MQ=60)
                     TGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTAC                                                                          <  SRR4302545.4990230/94‑1 (MQ=60)
                     TGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTAC                                                                          <  SRR4302545.7475419/94‑1 (MQ=60)
                      GTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCTAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACA                                                                         >  SRR4302545.7079310/1‑94 (MQ=60)
                      GTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACA                                                                         >  SRR4302545.7806937/1‑94 (MQ=60)
                      GTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACA                                                                         >  SRR4302545.8990105/1‑94 (MQ=60)
                       TGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACAC                                                                        <  SRR4302545.7167035/94‑1 (MQ=60)
                       TGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACAC                                                                        >  SRR4302545.3366480/1‑94 (MQ=60)
                       TGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACAC                                                                        <  SRR4302545.1088719/94‑1 (MQ=60)
                        GCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACG                                                                       <  SRR4302545.2627145/94‑1 (MQ=60)
                        GCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACG                                                                       <  SRR4302545.3446696/94‑1 (MQ=60)
                         CGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTGCACGA                                                                      <  SRR4302545.10043068/94‑1 (MQ=60)
                         CGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGA                                                                      >  SRR4302545.1960040/1‑94 (MQ=60)
                           GCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACC                                                                    >  SRR4302545.5722915/1‑94 (MQ=60)
                           GCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACC                                                                    >  SRR4302545.962953/1‑94 (MQ=60)
                           GCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACC                                                                    >  SRR4302545.6698810/1‑94 (MQ=60)
                            CATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCC                                                                   >  SRR4302545.3542938/1‑94 (MQ=60)
                             ATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCT                                                                  <  SRR4302545.7524806/94‑1 (MQ=60)
                             ATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCT                                                                  >  SRR4302545.9174262/1‑94 (MQ=60)
                             ATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCT                                                                  <  SRR4302545.6805700/94‑1 (MQ=60)
                              TGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTT                                                                 <  SRR4302545.4600840/94‑1 (MQ=60)
                              TGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTT                                                                 <  SRR4302545.5465923/94‑1 (MQ=60)
                               GATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTG                                                                <  SRR4302545.3281681/94‑1 (MQ=60)
                               GATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTG                                                                >  SRR4302545.9512128/1‑94 (MQ=60)
                                ATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGT                                                               >  SRR4302545.4260646/1‑94 (MQ=60)
                                ATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGT                                                               <  SRR4302545.5084165/94‑1 (MQ=60)
                                ATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGT                                                               >  SRR4302545.10767021/1‑94 (MQ=60)
                                 TGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTA                                                              >  SRR4302545.2103058/1‑94 (MQ=60)
                                 TGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTA                                                              >  SRR4302545.7924358/1‑94 (MQ=60)
                                 TGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTA                                                              <  SRR4302545.1822588/94‑1 (MQ=60)
                                  GTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAG                                                             <  SRR4302545.2566542/94‑1 (MQ=60)
                                  GTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAG                                                             <  SRR4302545.7786311/94‑1 (MQ=60)
                                  GTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAG                                                             >  SRR4302545.5080608/1‑94 (MQ=60)
                                   TCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGA                                                            >  SRR4302545.10085152/1‑94 (MQ=60)
                                   TCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGA                                                            >  SRR4302545.328274/1‑94 (MQ=60)
                                   TCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGA                                                            <  SRR4302545.7271129/94‑1 (MQ=60)
                                    CGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGAT                                                           >  SRR4302545.4697462/1‑94 (MQ=60)
                                    CGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGAT                                                           >  SRR4302545.10026639/1‑94 (MQ=60)
                                     GGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATA                                                          >  SRR4302545.10853377/1‑94 (MQ=60)
                                     GGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATA                                                          >  SRR4302545.9516358/1‑94 (MQ=60)
                                     GGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATA                                                          <  SRR4302545.3105215/94‑1 (MQ=60)
                                      GATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAGGTACACGACTTACACGACCCTTGTAGATAT                                                         <  SRR4302545.224539/94‑1 (MQ=60)
                                      GATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATAT                                                         <  SRR4302545.2720033/94‑1 (MQ=60)
                                       ATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATT                                                        >  SRR4302545.10205680/1‑94 (MQ=60)
                                       ATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATT                                                        <  SRR4302545.2952824/94‑1 (MQ=60)
                                        TGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTG                                                       <  SRR4302545.10343469/94‑1 (MQ=60)
                                        TGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTG                                                       >  SRR4302545.1775706/1‑94 (MQ=60)
                                        TGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCGTGTAGATATTG                                                       <  SRR4302545.5174264/94‑1 (MQ=60)
                                         GCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGC                                                      >  SRR4302545.8707537/1‑94 (MQ=60)
                                          CATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCC                                                     >  SRR4302545.1504891/1‑94 (MQ=60)
                                          CATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCC                                                     >  SRR4302545.86388/1‑94 (MQ=60)
                                          CATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCC                                                     >  SRR4302545.5713780/1‑94 (MQ=60)
                                           ATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCT                                                    <  SRR4302545.8014814/94‑1 (MQ=60)
                                            TGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTA                                                   >  SRR4302545.755379/1‑94 (MQ=60)
                                            TGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTA                                                   <  SRR4302545.8298315/94‑1 (MQ=60)
                                             GAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTAC                                                  >  SRR4302545.7291807/1‑94 (MQ=60)
                                             GAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTAC                                                  >  SRR4302545.6359619/1‑94 (MQ=60)
                                              AAGAACCGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACT                                                 <  SRR4302545.3976016/94‑1 (MQ=60)
                                              AAGAAACTCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTTCT                                                 >  SRR4302545.5778157/1‑94 (MQ=60)
                                              AAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACT                                                 >  SRR4302545.9404245/1‑94 (MQ=60)
                                                GAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTAT                                               >  SRR4302545.2823088/1‑94 (MQ=60)
                                                 AAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATT                                              <  SRR4302545.9292120/94‑1 (MQ=60)
                                                 AAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATT                                              >  SRR4302545.7414092/1‑94 (MQ=60)
                                                 AAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATT                                              >  SRR4302545.5312025/1‑94 (MQ=60)
                                                 AAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATT                                              >  SRR4302545.5312024/1‑94 (MQ=60)
                                                  AACGCGGTTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTC                                             <  SRR4302545.5381297/94‑1 (MQ=60)
                                                  AACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTC                                             <  SRR4302545.7352156/94‑1 (MQ=60)
                                                  AACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTC                                             <  SRR4302545.6603915/94‑1 (MQ=60)
                                                  AACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTC                                             <  SRR4302545.8042174/94‑1 (MQ=60)
                                                  AACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTC                                             <  SRR4302545.5381296/94‑1 (MQ=60)
                                                  AACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTC                                             <  SRR4302545.305618/94‑1 (MQ=60)
                                                   ACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCC                                            <  SRR4302545.8730474/94‑1 (MQ=60)
                                                   ACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCC                                            <  SRR4302545.4796312/94‑1 (MQ=60)
                                                    CGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCTG                                           >  SRR4302545.4469536/1‑94 (MQ=60)
                                                    CGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCG                                           <  SRR4302545.7883563/94‑1 (MQ=60)
                                                    CGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCG                                           >  SRR4302545.1301432/1‑94 (MQ=60)
                                                    CGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCG                                           >  SRR4302545.4009703/1‑94 (MQ=60)
                                                     GCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGC                                          <  SRR4302545.10309285/94‑1 (MQ=60)
                                                      CGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCG                                         <  SRR4302545.5017720/94‑1 (MQ=60)
                                                       GGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGT                                        >  SRR4302545.10514014/1‑94 (MQ=60)
                                                       GGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGT                                        >  SRR4302545.3520666/1‑94 (MQ=60)
                                                       GGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGT                                        >  SRR4302545.10471712/1‑94 (MQ=60)
                                                        GCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTC                                       <  SRR4302545.3377676/94‑1 (MQ=60)
                                                        GCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTC                                       <  SRR4302545.3678320/94‑1 (MQ=60)
                                                        GCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTC                                       <  SRR4302545.8816072/94‑1 (MQ=60)
                                                          TTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGC                                     >  SRR4302545.2599600/1‑94 (MQ=60)
                                                          TTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGC                                     <  SRR4302545.8385775/94‑1 (MQ=60)
                                                          TTTATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGC                                     >  SRR4302545.7187162/1‑94 (MQ=60)
                                                           TTATCCAGCCCAGTATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCG                                    >  SRR4302545.10755053/1‑94 (MQ=60)
                                                             ATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCC                                  >  SRR4302545.5269970/1‑94 (MQ=60)
                                                             ATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCC                                  >  SRR4302545.2767566/1‑94 (MQ=60)
                                                             ATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCC                                  >  SRR4302545.602312/1‑94 (MQ=60)
                                                             ATCCAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCC                                  >  SRR4302545.10613259/1‑94 (MQ=60)
                                                                CAGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCA                               >  SRR4302545.6175898/1‑94 (MQ=60)
                                                                 AGCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCAC                              <  SRR4302545.6896712/94‑1 (MQ=60)
                                                                 AGCCCAAGATCTCCAAATGCCGCCTGCCCCCCCGGAAGTACGCGTCTTACACGACCTTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCAC                              <  SRR4302545.1793947/94‑1 (MQ=53)
                                                                  GCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACG                             <  SRR4302545.6807973/94‑1 (MQ=60)
                                                                  GCCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACG                             >  SRR4302545.7862372/1‑94 (MQ=60)
                                                                   CCCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGT                            >  SRR4302545.1571835/1‑94 (MQ=60)
                                                                    CCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTT                           >  SRR4302545.2164042/1‑94 (MQ=60)
                                                                    CCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTT                           >  SRR4302545.7929915/1‑94 (MQ=60)
                                                                    CCAATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTT                           >  SRR4302545.5823781/1‑94 (MQ=60)
                                                                      AATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCA                         >  SRR4302545.935186/1‑94 (MQ=60)
                                                                      AATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCA                         >  SRR4302545.8639867/1‑94 (MQ=60)
                                                                      AATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCA                         >  SRR4302545.1937096/1‑94 (MQ=60)
                                                                       ATATTTACAAAAGCCTCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAA                        <  SRR4302545.6642337/94‑1 (MQ=60)
                                                                       ATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCTCGCCTCACGTTCAA                        <  SRR4302545.10859636/94‑1 (MQ=60)
                                                                       ATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAA                        <  SRR4302545.10859635/94‑1 (MQ=60)
                                                                       ATATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAA                        >  SRR4302545.8744268/1‑94 (MQ=60)
                                                                        TATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAAT                       >  SRR4302545.343398/1‑94 (MQ=60)
                                                                        TATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAAT                       >  SRR4302545.6632057/1‑94 (MQ=60)
                                                                        TATCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAAT                       >  SRR4302545.4770581/1‑94 (MQ=60)
                                                                          TCTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATAT                     >  SRR4302545.8289167/1‑94 (MQ=60)
                                                                           CTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATG                    >  SRR4302545.7038694/1‑94 (MQ=60)
                                                                           CTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATG                    >  SRR4302545.4142268/1‑94 (MQ=60)
                                                                           CTACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATG                    >  SRR4302545.5463072/1‑94 (MQ=60)
                                                                            TACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGA                   >  SRR4302545.1805166/1‑94 (MQ=60)
                                                                             ACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAA                  >  SRR4302545.724047/1‑94 (MQ=60)
                                                                             ACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAA                  >  SRR4302545.102914/1‑94 (MQ=60)
                                                                             ACAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAA                  <  SRR4302545.2823853/94‑1 (MQ=60)
                                                                              CAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAAT                 <  SRR4302545.1952434/94‑1 (MQ=60)
                                                                              CAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAAT                 >  SRR4302545.3286310/1‑94 (MQ=60)
                                                                              CAAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAAT                 >  SRR4302545.1771173/1‑94 (MQ=60)
                                                                              CAAAAGCAGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAAT                 <  SRR4302545.8070812/94‑1 (MQ=60)
                                                                               AAAAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATT                >  SRR4302545.601288/1‑94 (MQ=60)
                                                                                 AAGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTC              <  SRR4302545.8230087/94‑1 (MQ=60)
                                                                                  AGCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCC             >  SRR4302545.6090271/1‑94 (MQ=60)
                                                                                   GCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCT            <  SRR4302545.5814859/94‑1 (MQ=60)
                                                                                   GCCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCT            <  SRR4302545.10699964/94‑1 (MQ=60)
                                                                                    CCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTG           >  SRR4302545.5699367/1‑94 (MQ=60)
                                                                                    CCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTG           <  SRR4302545.9368898/94‑1 (MQ=60)
                                                                                    CCGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATGCCGCGTCGCGCCTCACGTTCAATATGAATTTTCTG           >  SRR4302545.8968564/1‑94 (MQ=60)
                                                                                     CGCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGC          >  SRR4302545.556216/1‑94 (MQ=60)
                                                                                      GCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCA         <  SRR4302545.8080820/94‑1 (MQ=60)
                                                                                      GCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCA         >  SRR4302545.2105277/1‑94 (MQ=60)
                                                                                      GCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCA         >  SRR4302545.8577829/1‑94 (MQ=60)
                                                                                      GCCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCA         <  SRR4302545.10075524/94‑1 (MQ=60)
                                                                                       CCTGCGCACCCGAAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCTG        <  SRR4302545.9667585/94‑1 (MQ=60)
                                                                                       CCTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAG        >  SRR4302545.6176002/1‑94 (MQ=60)
                                                                                        CTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGA       >  SRR4302545.4155536/1‑94 (MQ=60)
                                                                                        CTGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGA       >  SRR4302545.6249278/1‑94 (MQ=60)
                                                                                         TGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAA      >  SRR4302545.6842537/1‑94 (MQ=60)
                                                                                         TGCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAA      >  SRR4302545.6404304/1‑94 (MQ=60)
                                                                                          GCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAAT     <  SRR4302545.1445581/94‑1 (MQ=60)
                                                                                          GCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAAT     <  SRR4302545.7684937/94‑1 (MQ=60)
                                                                                          GCACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAAT     <  SRR4302545.6941801/94‑1 (MQ=60)
                                                                                           CACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATA    <  SRR4302545.8652144/94‑1 (MQ=60)
                                                                                           CACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATA    >  SRR4302545.4233091/1‑94 (MQ=60)
                                                                                           CACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATA    >  SRR4302545.4225391/1‑94 (MQ=60)
                                                                                            ACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATAC   >  SRR4302545.131006/1‑94 (MQ=60)
                                                                                            ACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATAC   >  SRR4302545.9568299/1‑94 (MQ=60)
                                                                                            ACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATAC   <  SRR4302545.6139577/94‑1 (MQ=60)
                                                                                            ACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATAC   >  SRR4302545.10055066/1‑94 (MQ=60)
                                                                                            ACACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATAC   <  SRR4302545.3022727/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTCACGTTCAATATGAATTTCCTGCAGAATACC  >  NC_000913/3395183‑3395369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑