Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,441,294	G→A	G147G (GGC→GGT)	prlA ←	putative ATPase subunit of translocase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,441,294	0	G	A	99.5%	2161.8 / NA	582	G147G (GGC→GGT)	prlA	putative ATPase subunit of translocase
Reads supporting (aligned to +/- strand): ref base G (0/3); new base A (251/326); total (251/331)
Fisher's exact test for biased strand distribution p-value = 2.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 593 total aligned reads displayed.

TCTGTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGGCCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTACTGG  >  NC_000913/3441203‑3441384

tCTGTTCGCCCAACCACATCAGGAACATGGGTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGAcc                                                                                          >  1:6529613/1‑94 (MQ=255)

 cTGTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCt                                                                                         <  1:8054691/94‑1 (MQ=255)

  tGTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCtt                                                                                        <  1:7503730/94‑1 (MQ=255)

   gTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTg                                                                                       >  1:5638326/1‑94 (MQ=255)

   gTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTg                                                                                       <  1:828021/94‑1 (MQ=255)

   gTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTg                                                                                       <  1:3897741/94‑1 (MQ=255)

   gTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTg                                                                                       <  2:130743/94‑1 (MQ=255)

    ttCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGc                                                                                      >  2:4654215/1‑94 (MQ=255)

     tCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCa                                                                                     <  2:3280893/94‑1 (MQ=255)

     tCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCa                                                                                     <  2:6002928/94‑1 (MQ=255)

      cGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCAt                                                                                    <  2:2453954/94‑1 (MQ=255)

      cGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCAt                                                                                    <  2:9618290/94‑1 (MQ=255)

       gCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATa                                                                                   <  2:542524/94‑1 (MQ=255)

       gCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATa                                                                                   >  1:4875348/1‑94 (MQ=255)

         ccAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATAcc                                                                                 <  1:1157446/94‑1 (MQ=255)

           aaCCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAg                                                                               >  1:2299704/1‑94 (MQ=255)

           aaCCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAg                                                                               >  1:8658901/1‑94 (MQ=255)

            aCCACATCAGGAACATGGTTCCTTTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAgg                                                                              <  1:6042108/94‑1 (MQ=255)

            aCCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAgg                                                                              <  2:4081161/94‑1 (MQ=255)

            aCCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAgg                                                                              >  1:4987660/1‑94 (MQ=255)

            aCCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAgg                                                                              <  2:9065940/94‑1 (MQ=255)

             ccACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGc                                                                             >  2:5753026/1‑94 (MQ=255)

               acaTCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGACCGGGTTAATCACCAGACCTTGCATACCAGGCat                                                                           >  1:7865160/1‑94 (MQ=255)

                caTCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCata                                                                          <  1:2499659/94‑1 (MQ=255)

                 aTCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCatat                                                                         >  2:3429589/1‑94 (MQ=255)

                   cAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTc                                                                       >  1:102571/1‑94 (MQ=255)

                    aGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCg                                                                      >  2:7928473/1‑94 (MQ=255)

                    aGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCg                                                                      <  2:9837656/94‑1 (MQ=255)

                       aaCATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCa                                                                   <  2:9699187/94‑1 (MQ=255)

                       aaCATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCa                                                                   <  2:278009/94‑1 (MQ=255)

                       aaCATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCa                                                                   <  1:4187448/94‑1 (MQ=255)

                        aCATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAg                                                                  <  2:4537735/94‑1 (MQ=255)

                        aCATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAg                                                                  <  1:9715983/94‑1 (MQ=255)

                         cATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAgc                                                                 >  2:8948052/1‑93 (MQ=255)

                         cATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGa                                                                 <  2:1473449/94‑1 (MQ=255)

                          aTGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGAc                                                                >  2:6565292/1‑94 (MQ=255)

                            ggTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCg                                                              <  1:1649638/94‑1 (MQ=255)

                            ggTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCg                                                              <  1:9471012/94‑1 (MQ=255)

                            ggTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCg                                                              >  1:933441/1‑94 (MQ=255)

                            ggTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCg                                                              <  1:9116944/94‑1 (MQ=255)

                            ggTGCCTGGAACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCg                                                              <  2:2918567/94‑1 (MQ=255)

                              ttCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGt                                                            <  2:104137/94‑1 (MQ=255)

                                ccTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAg                                                          <  2:726562/94‑1 (MQ=255)

                                    tgACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAAt                                                      >  1:9786975/1‑94 (MQ=255)

                                     gACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATa                                                     <  1:2884545/94‑1 (MQ=255)

                                      aCCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGTCCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATAc                                                    <  2:6789320/94‑1 (MQ=255)

                                       ccAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATAcc                                                   <  1:3792918/94‑1 (MQ=255)

                                       ccAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATAcc                                                   <  2:1122621/94‑1 (MQ=255)

                                       ccAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATAcc                                                   <  2:1030582/94‑1 (MQ=255)

                                        cAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCCCCAGGCCTTGCATTCCAGGCATATTCGGCAGACCGGTAGCAATACCg                                                  <  1:4021887/94‑1 (MQ=255)

                                        cAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCg                                                  <  2:4327796/94‑1 (MQ=255)

                                         aGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGa                                                 >  1:4633370/1‑94 (MQ=255)

                                          gACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGAt                                                <  2:6138592/94‑1 (MQ=255)

                                          gACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGAt                                                <  2:1913425/94‑1 (MQ=255)

                                           aCTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATc                                               <  1:7696482/94‑1 (MQ=255)

                                              tACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGAc                                            >  1:4497622/1‑94 (MQ=255)

                                                caacaGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTg                                          >  1:3051756/1‑94 (MQ=255)

                                                caacaGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTg                                          <  1:10604315/94‑1 (MQ=255)

                                                caacaGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTg                                          >  2:5161831/1‑94 (MQ=255)

                                                   caGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCGCCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGag                                       <  2:4943721/94‑2 (MQ=255)

                                                   caGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGCCTGTaa                                       >  1:8521059/1‑94 (MQ=255)

                                                    aGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAat                                      <  2:7607091/94‑1 (MQ=255)

                                                      cGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAatat                                    >  1:1287038/1‑94 (MQ=255)

                                                       ggTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATAtt                                   >  1:7149341/1‑94 (MQ=255)

                                                       ggTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATAtt                                   <  2:3769333/94‑1 (MQ=255)

                                                        gagAAGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTg                                  <  2:8225034/92‑1 (MQ=255)

                                                           aaGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCa                               >  1:317760/1‑94 (MQ=255)

                                                           aaGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCa                               <  2:10008364/94‑1 (MQ=255)

                                                           aaGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGAATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCa                               <  2:8707750/94‑1 (MQ=255)

                                                            aGTAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACTGATCGACTGGAATATTGCCAg                              >  2:216354/1‑94 (MQ=255)

                                                              tAGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCa                            >  1:1955358/1‑94 (MQ=255)

                                                               aGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCAc                           >  1:6134621/1‑94 (MQ=255)

                                                               aGAATGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCAc                           >  1:10414491/1‑94 (MQ=255)

                                                                 aaTGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCa                         <  2:8494016/94‑1 (MQ=255)

                                                                 aaTGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCa                         <  1:4313319/94‑1 (MQ=255)

                                                                  aTGCAAAGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCag                        <  1:6276667/94‑1 (MQ=255)

                                                                    gCAAAGCCCGGGTTAATCCCCAGGCCTTGCATACCAGGCATATTCGGCAGACGGGTAGCAATACCGATCGACTGGAATATTGCCCGCACCagag                      <  1:8493131/94‑1 (MQ=255)

                                                                       aaGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTAc                   <  2:6876429/94‑1 (MQ=255)

                                                                       aaGCCCGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTAc                   >  2:2217179/1‑94 (MQ=255)

                                                                           ccGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTa               >  2:10089253/1‑94 (MQ=255)

                                                                           ccGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTa               >  1:6824432/1‑94 (MQ=255)

                                                                            cGGGTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAg              >  1:6628491/1‑94 (MQ=255)

                                                                              ggTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCg            >  1:3412521/1‑94 (MQ=255)

                                                                               gTTAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCgg           <  1:8384801/94‑1 (MQ=255)

                                                                                ttAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCggg          <  1:137590/94‑1 (MQ=255)

                                                                                ttAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCggg          <  1:5221800/94‑1 (MQ=255)

                                                                                ttAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCggg          >  1:6972751/1‑94 (MQ=255)

                                                                                 tAATCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGgt         <  2:2346844/94‑1 (MQ=255)

                                                                                  aaTCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGgtg        >  1:8871812/1‑94 (MQ=255)

                                                                                  aaTCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGgtg        >  2:3061273/1‑94 (MQ=255)

                                                                                   aTCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGgtgt       <  1:3529843/94‑1 (MQ=255)

                                                                                   aTCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGgtgt       <  2:5537100/94‑1 (MQ=255)

                                                                                    tCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTa      <  2:3595287/94‑1 (MQ=255)

                                                                                    tCACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTa      >  2:482843/1‑94 (MQ=255)

                                                                                     cACCAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTAc     <  2:169063/94‑1 (MQ=255)

                                                                                       ccAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTACTg   >  2:7472127/1‑94 (MQ=255)

                                                                                       ccAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATACTGCCAGCACCAGAGTACCGTAGCGGGTGTACTg   >  2:9365096/1‑94 (MQ=255)

                                                                                        cAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTACTgg  <  1:10015268/94‑1 (MQ=255)

                                                                                        cAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTACTgg  >  2:6405830/1‑94 (MQ=255)

                                                                                        cAGACCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTACTgg  >  1:2723574/1‑94 (MQ=255)

TCTGTTCGCCCAACCACATCAGGAACATGGTTCCTGTGACCAGACTTACAACAGCGGTGAAGTAGAATGCAAAGCCCGGGTTAATCACCAGGCCTTGCATACCAGGCATATTCGGCAGACCGGTAGCAATACCGATCGACTGGAATATTGCCAGCACCAGAGTACCGTAGCGGGTGTACTGG  >  NC_000913/3441203‑3441384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 354 total aligned reads displayed.

ATGTTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGATGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGATA  >  NC_000913/3448598‑3448783

ATGTTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGG                                                                                              <  SRR4302545.6124734/94‑1 (MQ=60)

ATGTTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGG                                                                                              <  SRR4302545.8409621/94‑1 (MQ=60)

ATGTTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGG                                                                                              >  SRR4302545.3881579/1‑94 (MQ=60)

  GTTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTG                                                                                            <  SRR4302545.4213677/94‑1 (MQ=60)

   TTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGT                                                                                           <  SRR4302545.3210147/94‑1 (MQ=60)

    TGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTA                                                                                          >  SRR4302545.2518489/1‑94 (MQ=60)

    TGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTA                                                                                          <  SRR4302545.9278637/94‑1 (MQ=60)

     GCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAA                                                                                         <  SRR4302545.3516663/94‑1 (MQ=60)

      CGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAAC                                                                                        <  SRR4302545.1258437/94‑1 (MQ=60)

      CGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAAC                                                                                        >  SRR4302545.6673472/1‑94 (MQ=60)

      CGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAAC                                                                                        >  SRR4302545.5212080/1‑94 (MQ=60)

       GCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACG                                                                                       <  SRR4302545.10260720/94‑1 (MQ=60)

       GCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACG                                                                                       <  SRR4302545.3497906/94‑1 (MQ=60)

        CATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGG                                                                                      >  SRR4302545.9392042/1‑94 (MQ=60)

         ATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGC                                                                                     >  SRR4302545.4506282/1‑94 (MQ=60)

         ATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGC                                                                                     >  SRR4302545.90433/1‑94 (MQ=60)

          TCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCG                                                                                    >  SRR4302545.3949797/1‑94 (MQ=60)

           TGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGT                                                                                   >  SRR4302545.5060359/1‑94 (MQ=60)

            GGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTT                                                                                  >  SRR4302545.782161/1‑94 (MQ=60)

            GGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTT                                                                                  >  SRR4302545.7621009/1‑94 (MQ=60)

            GGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTT                                                                                  >  SRR4302545.10938276/1‑94 (MQ=60)

            GGCAGGGAGGTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGAGTAACGGCGTT                                                                                  >  SRR4302545.6078882/1‑94 (MQ=60)

             GCAGGGAGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGAGTATCGGCGTTC                                                                                 >  SRR4302545.10094925/1‑94 (MQ=60)

              TAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCGGGACGCCTGCTTTCAGGCATTTAGGGGCCAGGGTGTAACGGCGTTCA                                                                                <  SRR4302545.7572033/94‑1 (MQ=60)

              CAGGGTGTTACCTTGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCA                                                                                >  SRR4302545.2753410/1‑94 (MQ=60)

              CAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCA                                                                                >  SRR4302545.3534491/1‑94 (MQ=60)

              CAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCA                                                                                >  SRR4302545.5654484/1‑94 (MQ=60)

              CAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCA                                                                                >  SRR4302545.2222252/1‑94 (MQ=60)

              CAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGAGTAACGGCGTTCA                                                                                >  SRR4302545.1006096/1‑94 (MQ=60)

               AGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCAC                                                                               <  SRR4302545.7074939/94‑1 (MQ=60)

                GGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACC                                                                              >  SRR4302545.7419132/1‑94 (MQ=60)

                GGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACC                                                                              <  SRR4302545.10428616/94‑1 (MQ=60)

                 GGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCG                                                                             >  SRR4302545.10713086/1‑94 (MQ=60)

                  GTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGT                                                                            >  SRR4302545.6227427/1‑94 (MQ=60)

                  GTGTTACCTGGTTTGATCGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGT                                                                            >  SRR4302545.8664849/1‑94 (MQ=60)

                  GGGTTACCTGGTTTGACTGCAGCATCCATGCCAGACTGAATCTGGACGCCAGCTTTCAGGCCTTTAACGCCCAGGGTGTAAAGGCGTTCACCGC                                                                            >  SRR4302545.5423574/1‑94 (MQ=46)

                    GTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCT                                                                          <  SRR4302545.4925572/94‑1 (MQ=60)

                    GTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCT                                                                          >  SRR4302545.4286160/1‑94 (MQ=60)

                     TTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTT                                                                         >  SRR4302545.3831856/1‑94 (MQ=60)

                     TTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTT                                                                         >  SRR4302545.3831855/1‑94 (MQ=60)

                     TTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGATGTAACGGCGTTCACCGTCTT                                                                         <  SRR4302545.5510779/94‑1 (MQ=60)

                      TACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTT                                                                        <  SRR4302545.8272971/94‑1 (MQ=60)

                      TACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTT                                                                        >  SRR4302545.1788533/1‑94 (MQ=60)

                      TACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTT                                                                        <  SRR4302545.9295506/94‑1 (MQ=60)

                      TACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTT                                                                        >  SRR4302545.6456520/1‑94 (MQ=60)

                      TACCTGGTTTGATTGCAGCATCAACGCCAGACTGAAGCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTT                                                                        <  SRR4302545.4246509/94‑1 (MQ=60)

                       TCCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTG                                                                       <  SRR4302545.5125095/94‑1 (MQ=60)

                         CTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTA                                                                     >  SRR4302545.7687102/1‑94 (MQ=60)

                          TGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTAC                                                                    >  SRR4302545.3218369/1‑94 (MQ=60)

                          TGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTAC                                                                    >  SRR4302545.10065853/1‑94 (MQ=60)

                           GGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACA                                                                   <  SRR4302545.9907602/94‑1 (MQ=60)

                           GGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACA                                                                   <  SRR4302545.3461409/94‑1 (MQ=60)

                            GTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAG                                                                  <  SRR4302545.533734/94‑1 (MQ=60)

                            GTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAG                                                                  >  SRR4302545.9465508/1‑94 (MQ=60)

                             TTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGA                                                                 <  SRR4302545.1709411/94‑1 (MQ=60)

                             TTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGA                                                                 >  SRR4302545.104502/1‑94 (MQ=60)

                              TTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAA                                                                >  SRR4302545.8919267/1‑94 (MQ=60)

                               TGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAAC                                                               >  SRR4302545.7105395/1‑94 (MQ=60)

                                 ATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCA                                                             >  SRR4302545.8480500/1‑94 (MQ=60)

                                 ATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCA                                                             <  SRR4302545.4828038/94‑1 (MQ=60)

                                 ATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCA                                                             <  SRR4302545.3559810/94‑1 (MQ=60)

                                 ATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCA                                                             >  SRR4302545.10160261/1‑94 (MQ=60)

                                  TTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAG                                                            <  SRR4302545.1922310/94‑1 (MQ=60)

                                  TTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAG                                                            >  SRR4302545.8750896/1‑94 (MQ=60)

                                   TGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGC                                                           <  SRR4302545.9633612/94‑1 (MQ=60)

                                   TGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGC                                                           <  SRR4302545.3904290/94‑1 (MQ=60)

                                   TGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGC                                                           >  SRR4302545.1369597/1‑94 (MQ=60)

                                    GCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTTCCGAACCAACG                                                          <  SRR4302545.9689981/94‑1 (MQ=60)

                                    GCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCG                                                          <  SRR4302545.5232021/94‑1 (MQ=60)

                                     CAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGC                                                         >  SRR4302545.1329650/1‑94 (MQ=60)

                                     CAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGC                                                         >  SRR4302545.4890935/1‑94 (MQ=60)

                                      AGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCG                                                        <  SRR4302545.10177967/94‑1 (MQ=60)

                                      AGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCG                                                        >  SRR4302545.7879660/1‑94 (MQ=60)

                                      AGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCG                                                        >  SRR4302545.6511266/1‑94 (MQ=60)

                                       GCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGA                                                       <  SRR4302545.6813441/94‑1 (MQ=60)

                                        CATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGAT                                                      >  SRR4302545.2628891/1‑94 (MQ=60)

                                        CATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGAT                                                      <  SRR4302545.3646122/94‑1 (MQ=60)

                                        CATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGAT                                                      <  SRR4302545.2843866/94‑1 (MQ=60)

                                         ATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATG                                                     <  SRR4302545.6342084/94‑1 (MQ=60)

                                         ATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATG                                                     >  SRR4302545.1675132/1‑94 (MQ=60)

                                         ATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATG                                                     >  SRR4302545.10307284/1‑94 (MQ=60)

                                         ATCAACGCCAGACCGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGTGATG                                                     <  SRR4302545.559076/94‑1 (MQ=60)

                                          TCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGT                                                    >  SRR4302545.5733084/1‑94 (MQ=60)

                                           CAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTT                                                   <  SRR4302545.6019639/94‑1 (MQ=60)

                                           CAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTT                                                   <  SRR4302545.393159/94‑1 (MQ=60)

                                           CAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTT                                                   <  SRR4302545.6124253/94‑1 (MQ=60)

                                            AACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTC                                                  >  SRR4302545.1689777/1‑94 (MQ=60)

                                            AACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTC                                                  >  SRR4302545.4707450/1‑94 (MQ=60)

                                             ACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCG                                                 <  SRR4302545.10363018/94‑1 (MQ=60)

                                             ACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCG                                                 <  SRR4302545.10838407/94‑1 (MQ=60)

                                              CGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGC                                                <  SRR4302545.7032419/94‑1 (MQ=60)

                                              AGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGC                                                <  SRR4302545.3833137/94‑1 (MQ=60)

                                               GCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCG                                               >  SRR4302545.6175623/1‑94 (MQ=60)

                                               GCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCG                                               <  SRR4302545.7155877/94‑1 (MQ=60)

                                               GCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTATTTGTACAGAACCAGCGAGATGTTCGCG                                               >  SRR4302545.986288/1‑94 (MQ=60)

                                               GCCAGACTGAATCTGGTCGCCAGCTGTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCG                                               <  SRR4302545.8287437/94‑1 (MQ=60)

                                               GCCAGACTGAATCTAGTCGCCAGCTTTCAGGCCTTTAGGGGCCACGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCG                                               >  SRR4302545.6124053/1‑94 (MQ=60)

                                                CCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGG                                              <  SRR4302545.8845126/94‑1 (MQ=60)

                                                CCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGG                                              >  SRR4302545.8630688/1‑94 (MQ=60)

                                                 CAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGA                                             >  SRR4302545.2076644/1‑94 (MQ=60)

                                                 CAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGA                                             >  SRR4302545.4220005/1‑94 (MQ=60)

                                                 CAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGA                                             >  SRR4302545.1157689/1‑94 (MQ=60)

                                                  AGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGGGTAACGGCGTTCACCGCCTTTGTACAGAACCAGCGCGATGTTCGCGGAA                                            >  SRR4302545.798441/1‑94 (MQ=60)

                                                   GACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGACC                                           <  SRR4302545.6646928/94‑1 (MQ=60)

                                                   GACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAAC                                           <  SRR4302545.8257305/94‑1 (MQ=60)

                                                   GACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAAC                                           >  SRR4302545.2995708/1‑94 (MQ=60)

                                                   GACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCATCTTTGTACAGAACCAGCGCGATGTTCGCGGAAC                                           >  SRR4302545.7031727/1‑94 (MQ=60)

                                                    ACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACG                                          >  SRR4302545.3007378/1‑94 (MQ=60)

                                                    ACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACG                                          <  SRR4302545.1424667/94‑1 (MQ=60)

                                                     CTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGG                                         <  SRR4302545.9965953/94‑1 (MQ=60)

                                                     CTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGG                                         <  SRR4302545.5929043/94‑1 (MQ=60)

                                                     ATGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGG                                         <  SRR4302545.6721588/94‑1 (MQ=60)

                                                      TGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAAGGGT                                        >  SRR4302545.2192631/1‑94 (MQ=60)

                                                      TGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGT                                        <  SRR4302545.4362837/94‑1 (MQ=60)

                                                      TGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGT                                        >  SRR4302545.9023138/1‑94 (MQ=60)

                                                       GAGTCTGGTTGCCAGCTTTCAGGCCTTTAGGGGCTGGGGTGTATCGGCGTTCTCCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACTGTT                                       <  SRR4302545.6593964/94‑1 (MQ=60)

                                                       GAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGCACGGTT                                       >  SRR4302545.4430764/1‑94 (MQ=60)

                                                        AATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTC                                      <  SRR4302545.9775804/94‑1 (MQ=60)

                                                        AATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTC                                      <  SRR4302545.1148271/94‑1 (MQ=60)

                                                        AATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTC                                      >  SRR4302545.4122920/1‑94 (MQ=60)

                                                        AATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTC                                      <  SRR4302545.5482745/94‑1 (MQ=60)

                                                        AATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACACAACCATCGCGATGTTCGCGGGACGGTGC                                      >  SRR4302545.4881764/1‑94 (MQ=60)

                                                         ATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCG                                     <  SRR4302545.8385797/94‑1 (MQ=60)

                                                         ATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCG                                     >  SRR4302545.9096974/1‑94 (MQ=60)

                                                          TCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGG                                    >  SRR4302545.10213724/1‑94 (MQ=60)

                                                          TCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGG                                    <  SRR4302545.9599338/94‑1 (MQ=60)

                                                           CTGGTCGCGAGCTTTCAGGCCTTGAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGA                                   <  SRR4302545.4535126/94‑1 (MQ=60)

                                                             GGTCGCCGGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGACCGGTTCGGATC                                 <  SRR4302545.2958533/94‑1 (MQ=60)

                                                             GGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATC                                 >  SRR4302545.3733840/1‑94 (MQ=60)

                                                              GTCTCCAGCTTTCAGGCCTTTAGAGGCCAGGGTGGAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCG                                <  SRR4302545.6022632/94‑1 (MQ=60)

                                                              GTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCG                                <  SRR4302545.6022635/94‑1 (MQ=60)

                                                                 GCCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTAC                             >  SRR4302545.8513304/1‑94 (MQ=60)

                                                                  CCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACT                            >  SRR4302545.441491/1‑94 (MQ=60)

                                                                  CCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACT                            <  SRR4302545.9364027/94‑1 (MQ=60)

                                                                  CCAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACT                            >  SRR4302545.9786741/1‑94 (MQ=60)

                                                                   CAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTC                           >  SRR4302545.6409134/1‑94 (MQ=60)

                                                                   CAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTC                           <  SRR4302545.6074283/94‑1 (MQ=60)

                                                                   CAGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTC                           >  SRR4302545.10933394/1‑94 (MQ=60)

                                                                    AGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCA                          >  SRR4302545.5530847/1‑94 (MQ=60)

                                                                    AGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCA                          >  SRR4302545.6323044/1‑94 (MQ=60)

                                                                    AGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCA                          <  SRR4302545.7062849/94‑1 (MQ=60)

                                                                    AGCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCA                          <  SRR4302545.7461471/94‑1 (MQ=60)

                                                                     gcgttcagactttaAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTCCAGAACCAGCGCGATGTTCGCGGAACGGTTCCGATCGTGCTCAA                         <  SRR4302545.2541864/80‑1 (MQ=60)

                                                                     GCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAA                         <  SRR4302545.9498955/94‑1 (MQ=60)

                                                                     GCTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAA                         <  SRR4302545.4925392/94‑1 (MQ=60)

                                                                     GCTGTCAGGCCTTGAGGGGCCAGGGTGTAGCGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAA                         <  SRR4302545.4650568/94‑1 (MQ=60)

                                                                      CTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAG                        >  SRR4302545.88056/1‑94 (MQ=60)

                                                                      CTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAG                        <  SRR4302545.4381625/94‑1 (MQ=60)

                                                                      CTTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATAGTACTCAAG                        >  SRR4302545.6965022/1‑94 (MQ=60)

                                                                       TTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGA                       <  SRR4302545.5943300/94‑1 (MQ=60)

                                                                       TTTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGA                       >  SRR4302545.5338017/1‑94 (MQ=60)

                                                                        TTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGGTCGTACTCAAGAC                      >  SRR4302545.1281249/1‑94 (MQ=60)

                                                                        TTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGAC                      <  SRR4302545.7559294/94‑1 (MQ=60)

                                                                        TTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGAC                      >  SRR4302545.10486031/1‑94 (MQ=60)

                                                                        TTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGAC                      <  SRR4302545.2438588/94‑1 (MQ=60)

                                                                        TTCAGGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGAC                      >  SRR4302545.5294820/1‑94 (MQ=60)

                                                                         TCAGGCTTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACG                     <  SRR4302545.2752122/94‑1 (MQ=60)

                                                                            GGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTC                  <  SRR4302545.6152550/94‑1 (MQ=60)

                                                                            GGCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTC                  <  SRR4302545.6616415/94‑1 (MQ=60)

                                                                            GGCCGTGAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTC                  <  SRR4302545.6152548/94‑1 (MQ=60)

                                                                             GCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCA                 >  SRR4302545.1560681/1‑94 (MQ=60)

                                                                             GCCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCA                 <  SRR4302545.6042252/94‑1 (MQ=60)

                                                                              CCTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAA                >  SRR4302545.4421765/1‑94 (MQ=60)

                                                                               CTTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAAC               <  SRR4302545.2674552/94‑1 (MQ=60)

                                                                                TTTAGGGGGCAGGGTGTAAGGGCGTTCCCCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACA              <  SRR4302545.4781337/94‑1 (MQ=60)

                                                                                TTTAGGGGCGAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACA              <  SRR4302545.10356819/94‑1 (MQ=60)

                                                                                TTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACA              >  SRR4302545.3158617/1‑94 (MQ=60)

                                                                                TTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACA              >  SRR4302545.2242415/1‑94 (MQ=60)

                                                                                TTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACA              <  SRR4302545.2181853/94‑1 (MQ=60)

                                                                                TTTAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACA              <  SRR4302545.7746119/94‑1 (MQ=60)

                                                                                 TTAGAGGCAAGGGTGTCACGGCGTTCACCGTCTTTGTACAGCCCCAGCGCGATGTTCGCGGAACGGTTCGGTTCGTACTCAAGACGTACAAAAA             <  SRR4302545.9630685/94‑1 (MQ=60)

                                                                                  TAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAAC            <  SRR4302545.8309065/94‑1 (MQ=60)

                                                                                  TAGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAAC            >  SRR4302545.1991964/1‑94 (MQ=60)

                                                                                   AGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACT           >  SRR4302545.9836574/1‑94 (MQ=60)

                                                                                   AGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACT           <  SRR4302545.9454365/94‑1 (MQ=60)

                                                                                   AGGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACT           <  SRR4302545.1793008/94‑1 (MQ=60)

                                                                                    GGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTG          <  SRR4302545.5847662/94‑1 (MQ=60)

                                                                                    GGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTG          <  SRR4302545.3105459/94‑1 (MQ=60)

                                                                                    GGGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTG          <  SRR4302545.8404483/94‑1 (MQ=60)

                                                                                     TGGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGC         >  SRR4302545.9021437/1‑94 (MQ=60)

                                                                                      GGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGACCCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCC        <  SRR4302545.6273456/94‑1 (MQ=60)

                                                                                      GGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTTCTCAAGACGTTCAACAACTGCC        <  SRR4302545.10741670/94‑1 (MQ=60)

                                                                                      GGCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCC        <  SRR4302545.6273455/94‑1 (MQ=60)

                                                                                      GGACAGGGTGTAACGGCGTTCACCGTCTTTGTACAGACCCAGCGCGATGTTCGCTGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCC        <  SRR4302545.951671/94‑1 (MQ=60)

                                                                                       GCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCG       >  SRR4302545.615179/1‑94 (MQ=60)

                                                                                       GCCAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCG       <  SRR4302545.2914802/94‑1 (MQ=60)

                                                                                         CAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGG     <  SRR4302545.1912532/94‑1 (MQ=60)

                                                                                         CAGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACGCAAGACGTTCAACAACTGCCGGG     >  SRR4302545.8280914/1‑94 (MQ=60)

                                                                                          AGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGA    >  SRR4302545.6788294/1‑94 (MQ=60)

                                                                                          AGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGA    >  SRR4302545.8861710/1‑94 (MQ=60)

                                                                                          AGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGA    >  SRR4302545.6471500/1‑94 (MQ=60)

                                                                                          AGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGA    >  SRR4302545.6788295/1‑94 (MQ=60)

                                                                                          AGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGA    >  SRR4302545.225813/1‑94 (MQ=60)

                                                                                          AGGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGA    >  SRR4302545.8416716/1‑94 (MQ=60)

                                                                                           GGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGAT   <  SRR4302545.5261026/94‑1 (MQ=60)

                                                                                           GGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGAT   >  SRR4302545.5233313/1‑94 (MQ=60)

                                                                                           GGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGAT   <  SRR4302545.10848455/94‑1 (MQ=60)

                                                                                           GGGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGAT   >  SRR4302545.2356530/1‑94 (MQ=60)

                                                                                            GGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGATA  <  SRR4302545.821625/94‑1 (MQ=60)

                                                                                            GGTGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGATA  <  SRR4302545.4551704/94‑1 (MQ=60)

ATGTTGCGCATCGGCAGGGTGTTACCTGGTTTGATTGCAGCATCAACGCCAGACTGAATCTGGTCGCCAGCTTTCAGGCCTTTAGGGGCCAGGATGTAACGGCGTTCACCGTCTTTGTACAGAACCAGCGCGATGTTCGCGGAACGGTTCGGATCGTACTCAAGACGTTCAACAACTGCCGGGATA  >  NC_000913/3448598‑3448783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`