Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,493,873 T→G R742R (CGT→CGG nirB → nitrite reductase (NAD(P)H) subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,493,8730TG99.4% 2283.9 / ‑0.6 659R742R (CGT→CGGnirBnitrite reductase (NAD(P)H) subunit
Reads supporting (aligned to +/- strand):  ref base T (3/1);  new base G (360/295);  total (363/296)
Fisher's exact test for biased strand distribution p-value = 6.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01

Only 100 of 680 total aligned reads displayed.

TGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAA  >  NC_000913/3493782‑3493963
                                                                                           |                                                                                          
  aaaCCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTg                                                                                        >  1:9851876/1‑94 (MQ=255)
  aaaCCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTg                                                                                        <  1:5414807/94‑1 (MQ=255)
    aCCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGcc                                                                                      <  2:9144205/94‑1 (MQ=255)
    aCCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGcc                                                                                      >  2:10273346/1‑94 (MQ=255)
    aCCGCGTCAGGCGTGTCTGCTGGGGGCGGAGATCGATAGCGAAACGCTGATCAAATATCTCGACCGCTTCATGAGGTTCTACATCCGGACTGcc                                                                                      <  2:6375081/94‑1 (MQ=255)
      cgcgTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGa                                                                                    <  1:2349046/94‑1 (MQ=255)
       gcgTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGAc                                                                                   >  1:81716/1‑94 (MQ=255)
       gcgTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGAc                                                                                   >  1:4771512/1‑94 (MQ=255)
               cGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAc                                                                           <  1:4493460/94‑1 (MQ=255)
               cGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAc                                                                           >  1:1371974/1‑94 (MQ=255)
               cGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAc                                                                           <  1:1615534/94‑1 (MQ=255)
               cGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAc                                                                           <  2:4033992/94‑1 (MQ=255)
                ggATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAcg                                                                          >  1:2250707/1‑94 (MQ=255)
                 gATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAcgc                                                                         >  2:8158453/1‑94 (MQ=255)
                  aTCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAcgcg                                                                        >  1:2839080/1‑94 (MQ=255)
                  aTCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAcgcg                                                                        <  1:1723265/94‑1 (MQ=255)
                    ctgctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTa                                                                      >  2:9018922/1‑94 (MQ=255)
                    ctgctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTa                                                                      <  1:10438906/94‑1 (MQ=255)
                     tgctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTAc                                                                     <  2:7811245/94‑1 (MQ=255)
                     tgctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTAc                                                                     >  2:6134016/1‑94 (MQ=255)
                     tgctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGCAc                                                                     >  2:1189917/1‑94 (MQ=255)
                       ctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCg                                                                   <  1:10017323/94‑1 (MQ=255)
                       ctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCg                                                                   >  1:9199498/1‑94 (MQ=255)
                       ctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCg                                                                   >  1:2164277/1‑94 (MQ=255)
                       ctgGCGGCGGATATCGATCCCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCAAAAAACTGACCCGTAccc                                                                   >  2:3818960/1‑93 (MQ=255)
                           cggcggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCAcc                                                               <  1:7751564/94‑1 (MQ=255)
                             gcggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGTCGACAAACTGACGCGTACCCCACCgg                                                             >  1:6566466/1‑93 (MQ=255)
                                gATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGt                                                          >  1:2643166/1‑94 (MQ=255)
                                 atatCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGtt                                                         <  1:4186382/94‑1 (MQ=255)
                                 atatCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGtt                                                         <  2:5310921/94‑1 (MQ=255)
                                   atcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTCCCGACAAACTGACGCGTACCGCACCGGGGTTAg                                                       >  2:2379193/1‑94 (MQ=255)
                                    tcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGa                                                      >  1:3840165/1‑94 (MQ=255)
                                    tcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGa                                                      <  2:96759/94‑1 (MQ=255)
                                     cgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaa                                                     >  2:8580012/1‑94 (MQ=255)
                                     cgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaa                                                     >  1:1808979/1‑94 (MQ=255)
                                      gatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaaa                                                    >  2:1067787/1‑94 (MQ=255)
                                       atcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaaaa                                                   >  2:4238410/1‑94 (MQ=255)
                                        tcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAAc                                                  <  2:3457055/94‑1 (MQ=255)
                                         cgcgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAAcc                                                 >  2:8334650/1‑94 (MQ=255)
                                          gcgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCt                                                >  2:1385493/1‑94 (MQ=255)
                                          gcgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCt                                                <  1:9508407/94‑1 (MQ=255)
                                           cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTTCATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTc                                               <  1:10195651/94‑1 (MQ=255)
                                           cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTc                                               <  2:8426483/94‑1 (MQ=255)
                                           cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTc                                               <  1:8558851/94‑1 (MQ=255)
                                           cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTc                                               >  1:4662455/1‑94 (MQ=255)
                                           cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTc                                               <  2:1808343/94‑1 (MQ=255)
                                            gAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCg                                              >  1:6738742/1‑94 (MQ=255)
                                             aaaCGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTATAAAACCTCGa                                             >  1:152570/1‑94 (MQ=255)
                                              aaCGATAATCAAATATCTCGACCGCTTCATGATGTTCTACATCAGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCaaa                                            <  1:9419803/94‑1 (MQ=255)
                                                cGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAgg                                          <  2:9859278/94‑1 (MQ=255)
                                                cGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAgg                                          >  2:3890648/1‑94 (MQ=255)
                                                cGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAgg                                          <  1:5901163/94‑1 (MQ=255)
                                                 gCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggc                                         <  2:9535641/94‑1 (MQ=255)
                                                  cTGATCAAATATCTCGACCGCTTCATGATGTTCTCCATCCGGACTGCCGACAACCCGACCCGTACCGCACCATGGTTAGAGAACCCCGAAggcg                                        >  1:7966256/1‑94 (MQ=255)
                                                  cTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcg                                        >  1:6225610/1‑94 (MQ=255)
                                                  cTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcg                                        <  2:7294569/94‑1 (MQ=255)
                                                   tGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcgg                                       <  2:1591595/94‑1 (MQ=255)
                                                   tGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcgg                                       <  2:3596417/94‑1 (MQ=255)
                                                     aTCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCa                                     >  1:8887570/1‑94 (MQ=255)
                                                      tCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAt                                    <  2:881818/94‑1 (MQ=255)
                                                       cAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATc                                   >  2:5973543/1‑94 (MQ=255)
                                                       cAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATc                                   >  1:2014466/1‑94 (MQ=255)
                                                         aaTATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGa                                 <  1:5646266/94‑1 (MQ=255)
                                                         aaTATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGa                                 <  2:2992001/94‑1 (MQ=255)
                                                         aaTATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGa                                 >  2:7084654/1‑94 (MQ=255)
                                                         aaTATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGa                                 <  2:6757228/94‑1 (MQ=255)
                                                           tatCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAtt                               >  2:6591934/1‑94 (MQ=255)
                                                            atCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTa                              >  1:6986015/1‑94 (MQ=255)
                                                            atCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTa                              >  2:4587235/1‑94 (MQ=255)
                                                            atCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTa                              >  2:10141324/1‑94 (MQ=255)
                                                             tctcGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTAc                             <  1:509170/94‑1 (MQ=255)
                                                             tctcGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTAc                             <  1:3295439/94‑1 (MQ=255)
                                                              ctcGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTAcc                            >  1:8413091/1‑94 (MQ=255)
                                                               tggACTGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCt                           <  2:7379518/92‑1 (MQ=255)
                                                               tcGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCt                           >  2:5538930/1‑94 (MQ=255)
                                                                cGACCACTTCATGATGTTCTACATCTGGACTGCCGACAAACTGACGCGTACCCCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTg                          <  2:4742235/94‑1 (MQ=255)
                                                                  aCCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGaa                        <  2:9295540/94‑1 (MQ=255)
                                                                  aCCGCTTCATGATGTTCTACACCCGGACTGCCGACAAACTGACGCGTCCCGCCCCGTGGTTAGAAACCCTCGAAGGCGGCATCGATTCCCTGaa                        <  1:1230465/94‑1 (MQ=255)
                                                                   ccGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGaaa                       >  2:3168222/1‑94 (MQ=255)
                                                                   ccGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGGTAGAAAACCTCGAAGGCGGCATCGATTACCTGaaa                       >  2:4513231/1‑94 (MQ=255)
                                                                    cGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAg                      >  2:2764487/1‑94 (MQ=255)
                                                                     gCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGc                     >  2:2202845/1‑94 (MQ=255)
                                                                      cTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCa                    <  2:5767319/94‑1 (MQ=255)
                                                                       ttCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAg                   >  1:3422576/1‑94 (MQ=255)
                                                                       ttCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAg                   <  2:803434/94‑1 (MQ=255)
                                                                       ttCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAg                   <  1:7514553/94‑1 (MQ=255)
                                                                         cATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTg                 <  2:2531299/94‑1 (MQ=255)
                                                                         cATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTg                 <  2:7654627/94‑1 (MQ=255)
                                                                           tgatgTTCTACATCCGGACTGCCGACAACCTGACGCGTCCCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAt               <  1:6373372/94‑1 (MQ=255)
                                                                           tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAt               >  1:6059893/1‑94 (MQ=255)
                                                                           tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAt               <  1:3135924/94‑1 (MQ=255)
                                                                            gatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATc              >  1:7219439/1‑94 (MQ=255)
                                                                             atgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCa             <  2:4893249/94‑1 (MQ=255)
                                                                               gTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAtt           >  1:3978738/1‑94 (MQ=255)
                                                                                ttCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTg          <  1:9058063/94‑1 (MQ=255)
                                                                                  cTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgac        >  2:5090389/1‑94 (MQ=255)
                                                                                   tACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgacg       >  2:2018901/1‑94 (MQ=255)
                                                                                      aTCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACa    >  2:2312357/1‑94 (MQ=255)
                                                                                      aTCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACa    >  1:3709199/1‑94 (MQ=255)
                                                                                      aTCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACa    >  2:717837/1‑94 (MQ=255)
                                                                                           |                                                                                          
TGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAA  >  NC_000913/3493782‑3493963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 308 total aligned reads displayed.
TTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGAATT  >  NC_000913/3499134‑3499320
                                                                                             |                                                                                             
TTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGC                                                                                               <  SRR4302545.6114716/94‑1 (MQ=60)
 TTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCA                                                                                              <  SRR4302545.4349129/94‑1 (MQ=60)
 TTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCA                                                                                              <  SRR4302545.3674602/94‑1 (MQ=60)
  TCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAA                                                                                             <  SRR4302545.193687/94‑1 (MQ=60)
   CCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAAT                                                                                            >  SRR4302545.1556239/1‑94 (MQ=60)
   CCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAAT                                                                                            >  SRR4302545.10576671/1‑94 (MQ=60)
    CGTCTGGTAGTTCTGCGATAACTCCCCGTATCGCCTAAACGATCGTTGCGCAGTAATTGGCGTTTCTGACGTCGGTAAATCCGAAGAGGCAATC                                                                                           <  SRR4302545.4826102/94‑1 (MQ=57)
    CGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATC                                                                                           <  SRR4302545.898721/94‑1 (MQ=60)
     GGCTGGGAGTTCTGCGATAACGCCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCA                                                                                          <  SRR4302545.7135619/94‑1 (MQ=60)
     GGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCA                                                                                          >  SRR4302545.8201120/1‑94 (MQ=60)
     GGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCA                                                                                          >  SRR4302545.10877172/1‑94 (MQ=60)
     CGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCA                                                                                          <  SRR4302545.6468137/94‑1 (MQ=60)
      GCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAA                                                                                         >  SRR4302545.6098009/1‑94 (MQ=60)
       CTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAA                                                                                        >  SRR4302545.5240607/1‑94 (MQ=60)
       CTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAA                                                                                        >  SRR4302545.1255651/1‑94 (MQ=60)
        TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG                                                                                       <  SRR4302545.10432973/94‑1 (MQ=60)
        TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG                                                                                       >  SRR4302545.4899823/1‑94 (MQ=60)
        TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG                                                                                       >  SRR4302545.4477106/1‑94 (MQ=60)
        TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG                                                                                       >  SRR4302545.8770884/1‑94 (MQ=60)
         GGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGC                                                                                      <  SRR4302545.2187663/94‑1 (MQ=60)
         GGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGC                                                                                      >  SRR4302545.173374/1‑94 (MQ=60)
         GGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGC                                                                                      >  SRR4302545.566581/1‑94 (MQ=60)
         GGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGC                                                                                      <  SRR4302545.10592933/94‑1 (MQ=60)
         GGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGC                                                                                      <  SRR4302545.5254967/94‑1 (MQ=60)
          GGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCG                                                                                     <  SRR4302545.9919906/94‑1 (MQ=60)
           GAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCGATCAAAGCGC                                                                                    <  SRR4302545.7239321/94‑1 (MQ=60)
            AGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCT                                                                                   >  SRR4302545.1449649/1‑94 (MQ=60)
            AGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCT                                                                                   <  SRR4302545.6750802/94‑1 (MQ=60)
            AGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCT                                                                                   <  SRR4302545.6750803/94‑1 (MQ=60)
            AGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCT                                                                                   <  SRR4302545.5359535/94‑1 (MQ=60)
            AGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCT                                                                                   <  SRR4302545.6893626/94‑1 (MQ=60)
              TTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGG                                                                                 <  SRR4302545.1326845/94‑1 (MQ=60)
               TCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGA                                                                                <  SRR4302545.9505368/94‑1 (MQ=60)
                CTGCGATAACTCCCCGTGTCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAG                                                                               <  SRR4302545.7087635/94‑1 (MQ=60)
                CTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAG                                                                               >  SRR4302545.3227870/1‑94 (MQ=60)
                CTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAG                                                                               >  SRR4302545.4145790/1‑94 (MQ=60)
                CTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAG                                                                               <  SRR4302545.2721258/94‑1 (MQ=60)
                CTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAG                                                                               <  SRR4302545.10679718/94‑1 (MQ=60)
                 TGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGC                                                                              >  SRR4302545.9418459/1‑94 (MQ=60)
                 TGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGC                                                                              <  SRR4302545.2047111/94‑1 (MQ=60)
                  GCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCT                                                                             <  SRR4302545.6140057/94‑1 (MQ=60)
                   CGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTG                                                                            <  SRR4302545.5243951/94‑1 (MQ=60)
                   CGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTG                                                                            <  SRR4302545.10343771/94‑1 (MQ=60)
                   CGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTG                                                                            <  SRR4302545.765990/94‑1 (MQ=60)
                    GATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGG                                                                           <  SRR4302545.255027/94‑1 (MQ=60)
                    GATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGG                                                                           <  SRR4302545.8539643/94‑1 (MQ=60)
                    GATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGG                                                                           <  SRR4302545.8539644/94‑1 (MQ=60)
                     ATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGG                                                                          >  SRR4302545.6619671/1‑94 (MQ=60)
                     ATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGG                                                                          >  SRR4302545.5923043/1‑94 (MQ=60)
                      TAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGC                                                                         <  SRR4302545.7484738/94‑1 (MQ=60)
                      TAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGC                                                                         >  SRR4302545.2162520/1‑94 (MQ=60)
                        ACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCG                                                                       <  SRR4302545.3830629/94‑1 (MQ=60)
                        ACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGAATACGGTAAAACCGAAGAGGCAATCAAAGAGCTGGAGCTGGGCCG                                                                       >  SRR4302545.3041975/1‑94 (MQ=60)
                         CACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGG                                                                      <  SRR4302545.3408262/94‑1 (MQ=60)
                         CACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGG                                                                      <  SRR4302545.8921077/94‑1 (MQ=60)
                         CACCCCGTATCGCCTCGACGACCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGG                                                                      <  SRR4302545.4350462/94‑1 (MQ=60)
                         CACCCCGTATCGACTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGG                                                                      <  SRR4302545.9676025/94‑1 (MQ=60)
                          CCCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGG                                                                     <  SRR4302545.7508045/94‑1 (MQ=60)
                          ACCCCGTATCGCCTCGACGATCGTTGCGCATTTATTCGCGTTTCTTACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGG                                                                     >  SRR4302545.9955542/1‑94 (MQ=60)
                          ACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGG                                                                     <  SRR4302545.4730343/94‑1 (MQ=60)
                          ACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGG                                                                     <  SRR4302545.7508044/94‑1 (MQ=60)
                          ACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGC                                                                     >  SRR4302545.7008298/1‑94 (MQ=60)
                           CCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGC                                                                    >  SRR4302545.4172878/1‑94 (MQ=60)
                            CCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCC                                                                   >  SRR4302545.8961409/1‑94 (MQ=60)
                            CCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCC                                                                   <  SRR4302545.1486546/94‑1 (MQ=60)
                             CCTTATCGCCTCGGCGATCGTTGCGGAGTAATGGTCGTTTCTGCCTACGGTAAAACCGAAGAGGCAATCCAAGCGCTGGAGCTGGGCCGGGCCT                                                                  <  SRR4302545.3289507/94‑1 (MQ=60)
                             CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT                                                                  <  SRR4302545.7127456/94‑1 (MQ=60)
                             CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT                                                                  <  SRR4302545.532811/94‑1 (MQ=60)
                             CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT                                                                  <  SRR4302545.10447135/94‑1 (MQ=60)
                              CGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTG                                                                 >  SRR4302545.8487832/1‑94 (MQ=60)
                              CGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTG                                                                 <  SRR4302545.5599250/94‑1 (MQ=60)
                              CGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTG                                                                 >  SRR4302545.367986/1‑94 (MQ=60)
                               GTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGC                                                                >  SRR4302545.3376785/1‑94 (MQ=60)
                               GTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGC                                                                <  SRR4302545.2512958/94‑1 (MQ=60)
                                TATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCG                                                               <  SRR4302545.495030/94‑1 (MQ=60)
                                TATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCG                                                               <  SRR4302545.7457327/94‑1 (MQ=60)
                                TATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCG                                                               <  SRR4302545.2250019/94‑1 (MQ=60)
                                 ATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGG                                                              >  SRR4302545.1613216/1‑94 (MQ=60)
                                 ATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGG                                                              <  SRR4302545.3569638/94‑1 (MQ=60)
                                 ATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCGGCGG                                                              >  SRR4302545.10243324/1‑94 (MQ=60)
                                 ATCGCCTCGACGATCGTTGCGCAGTAATTGGAGTTTCTGACTACGGTAAAACCGAAGAGGCACTCAAAGCGCTGGATCTGTGCTGGGCCTGAGG                                                              >  SRR4302545.7522266/1‑94 (MQ=60)
                                  TCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGC                                                             <  SRR4302545.8890745/94‑1 (MQ=60)
                                  TCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGC                                                             <  SRR4302545.3246471/94‑1 (MQ=60)
                                   CGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCG                                                            >  SRR4302545.6928416/1‑94 (MQ=60)
                                    GCCTCGACGATCGTTGCGCAGTAATTGGTGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGC                                                           >  SRR4302545.7424240/1‑94 (MQ=60)
                                    GCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGC                                                           >  SRR4302545.2361016/1‑94 (MQ=60)
                                    GCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGC                                                           >  SRR4302545.4941015/1‑94 (MQ=60)
                                      CTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCAC                                                         >  SRR4302545.8903941/1‑94 (MQ=60)
                                       TCGACGATCGTTGCGCAGTAATTGGCGTTTCTAACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACT                                                        <  SRR4302545.2160524/94‑1 (MQ=60)
                                        CGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTC                                                       >  SRR4302545.486130/1‑94 (MQ=60)
                                         GACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCA                                                      >  SRR4302545.5634533/1‑94 (MQ=60)
                                         GACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCA                                                      >  SRR4302545.7004032/1‑94 (MQ=60)
                                         GACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCA                                                      <  SRR4302545.10929660/94‑1 (MQ=60)
                                          ACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCAC                                                     <  SRR4302545.8528882/94‑1 (MQ=60)
                                          ACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCAC                                                     <  SRR4302545.5937183/94‑1 (MQ=60)
                                          ACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCAC                                                     <  SRR4302545.10271219/94‑1 (MQ=60)
                                           CGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACT                                                    >  SRR4302545.2861195/1‑94 (MQ=60)
                                           CGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACT                                                    >  SRR4302545.6667093/1‑94 (MQ=60)
                                            GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTATAACCGAAGAGGCGATCAAAGAGCTGGAGCTGGGCCGGGCCTGCGGCGGACCCACTG                                                   >  SRR4302545.4123111/1‑94 (MQ=60)
                                            GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGTGCCTGCGGCGCACTCACTG                                                   >  SRR4302545.9644018/1‑94 (MQ=60)
                                            GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGGCTGCGGCGCACTCACTG                                                   >  SRR4302545.539914/1‑94 (MQ=60)
                                            GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTG                                                   >  SRR4302545.9924701/1‑94 (MQ=60)
                                            GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTG                                                   <  SRR4302545.2306437/94‑1 (MQ=60)
                                             ATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGC                                                  <  SRR4302545.4115892/94‑1 (MQ=60)
                                             ATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGC                                                  >  SRR4302545.7966305/1‑94 (MQ=60)
                                             ATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGC                                                  >  SRR4302545.9158937/1‑94 (MQ=60)
                                               CGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGG                                                <  SRR4302545.8568702/94‑1 (MQ=60)
                                               CGTTGCGCAGTAATTGGCGTTTCTGACCACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGG                                                >  SRR4302545.7045292/1‑94 (MQ=60)
                                                GTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGC                                               >  SRR4302545.5973213/1‑94 (MQ=60)
                                                GTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGC                                               >  SRR4302545.251716/1‑94 (MQ=60)
                                                 TTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCG                                              <  SRR4302545.1545527/94‑1 (MQ=60)
                                                  TGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCccccaccgccgggg                                             >  SRR4302545.3978182/1‑80 (MQ=60)
                                                  TGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGT                                             >  SRR4302545.9457454/1‑94 (MQ=60)
                                                  TGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGT                                             >  SRR4302545.5477298/1‑94 (MQ=60)
                                                  TGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCCGCGCACTCACTGCGGCGT                                             >  SRR4302545.4410117/1‑94 (MQ=60)
                                                    CGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTC                                           >  SRR4302545.7163287/1‑94 (MQ=60)
                                                    CGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTC                                           <  SRR4302545.7081975/94‑1 (MQ=60)
                                                    CGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGATGGTCCGGCACTGTGGCGCACGCACTGCGGCGTTC                                           >  SRR4302545.7163570/1‑94 (MQ=60)
                                                      CAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCAC                                         <  SRR4302545.9130835/94‑1 (MQ=60)
                                                      CAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCAC                                         >  SRR4302545.4454744/1‑94 (MQ=60)
                                                         agcgctttgattgcctCTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAA                                      >  SRR4302545.3723357/17‑94 (MQ=60)
                                                         TAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAA                                      <  SRR4302545.3920355/94‑1 (MQ=60)
                                                         TAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAA                                      >  SRR4302545.5698231/1‑94 (MQ=60)
                                                          AATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAA                                     <  SRR4302545.7588559/94‑1 (MQ=60)
                                                           ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC                                    <  SRR4302545.7028788/94‑1 (MQ=60)
                                                           ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC                                    <  SRR4302545.3994370/94‑1 (MQ=60)
                                                           ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC                                    <  SRR4302545.6460024/94‑1 (MQ=60)
                                                            TTGGCGTTTCTGTCTCCGGTAAAACCGAAGAGGCAATCAACGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCACACG                                   <  SRR4302545.9648802/94‑1 (MQ=60)
                                                            TTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACG                                   <  SRR4302545.3240871/94‑1 (MQ=60)
                                                            TTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGCGCCGTGCCTGCGGCGCACTCACTGCGGGGTTCACCAAACG                                   >  SRR4302545.3187712/1‑94 (MQ=60)
                                                            TGGGCGTTTCTGACTACGGTAAGACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGTGCTCACTGCGGCGTTCACCAAACG                                   <  SRR4302545.5685253/94‑1 (MQ=60)
                                                             TGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGC                                  >  SRR4302545.4746212/1‑94 (MQ=60)
                                                             TGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGC                                  <  SRR4302545.8417550/94‑1 (MQ=60)
                                                             TGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGC                                  <  SRR4302545.1035086/94‑1 (MQ=60)
                                                              GGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCG                                 >  SRR4302545.6358214/1‑94 (MQ=60)
                                                              GGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCG                                 <  SRR4302545.5149621/94‑1 (MQ=60)
                                                              GGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCG                                 <  SRR4302545.329533/94‑1 (MQ=60)
                                                               GCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGC                                >  SRR4302545.1007165/1‑94 (MQ=60)
                                                                CGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCTCTGCGGCGTTCACCCAACGCGCG                               >  SRR4302545.697975/1‑94 (MQ=60)
                                                                CGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCG                               <  SRR4302545.7638489/94‑1 (MQ=60)
                                                                 GTTTCTGAGTACGGTAAAACAGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGTCTGCGGCGCACTCcatgccgcgctaacccaacgcccgg                              >  SRR4302545.5898747/1‑69 (MQ=60)
                                                                 GTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGG                              >  SRR4302545.5129037/1‑94 (MQ=60)
                                                                 GTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGG                              >  SRR4302545.2414142/1‑94 (MQ=60)
                                                                 GTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGG                              <  SRR4302545.3249087/94‑1 (MQ=60)
                                                                 GTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGG                              <  SRR4302545.4839457/94‑1 (MQ=60)
                                                                   TTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGAT                            >  SRR4302545.9246702/1‑94 (MQ=60)
                                                                    TCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATA                           <  SRR4302545.5726977/94‑1 (MQ=60)
                                                                    TCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATA                           >  SRR4302545.5312310/1‑94 (MQ=60)
                                                                    TCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATA                           <  SRR4302545.10220526/94‑1 (MQ=60)
                                                                     GTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGATGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAG                          <  SRR4302545.4901503/94‑1 (MQ=60)
                                                                     CTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAG                          <  SRR4302545.4793522/94‑1 (MQ=60)
                                                                     CTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAG                          >  SRR4302545.1956944/1‑94 (MQ=60)
                                                                     CTGACAACGGAACAACCGAGGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCAAATAG                          <  SRR4302545.9696840/94‑1 (MQ=60)
                                                                      TGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGC                         <  SRR4302545.7259236/94‑1 (MQ=60)
                                                                       GACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCTCTCACTGCGGCGTTCACCAAACGCGCGGATAGCC                        <  SRR4302545.7514466/94‑1 (MQ=60)
                                                                       GACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCC                        >  SRR4302545.1715602/1‑94 (MQ=60)
                                                                       GACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCAGCGTTCACCAAACGCGCGGATAGCC                        <  SRR4302545.10295546/94‑1 (MQ=60)
                                                                        ACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCC                       <  SRR4302545.10107858/94‑1 (MQ=60)
                                                                         CTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCG                      <  SRR4302545.6311808/94‑1 (MQ=60)
                                                                         CTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCG                      <  SRR4302545.7658988/94‑1 (MQ=60)
                                                                          TACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGA                     >  SRR4302545.2407086/1‑94 (MQ=60)
                                                                          TACGGTAAAACCGAAGAGGAAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCTCTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGA                     <  SRR4302545.10554197/94‑1 (MQ=60)
                                                                           ACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGAT                    >  SRR4302545.4635368/1‑94 (MQ=60)
                                                                           ACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACCGCGGCGTTCACCAAACGCGCGGAgaaccccat                    >  SRR4302545.373217/1‑85 (MQ=60)
                                                                            CGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATT                   <  SRR4302545.8953784/94‑1 (MQ=60)
                                                                            CGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGACTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCACGATT                   >  SRR4302545.6080826/1‑94 (MQ=60)
                                                                             GGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCCCCAAACGCGCGGATAGCCCGATTA                  <  SRR4302545.8976167/94‑1 (MQ=60)
                                                                             GGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTA                  <  SRR4302545.4605387/94‑1 (MQ=60)
                                                                             GGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTA                  >  SRR4302545.2858492/1‑94 (MQ=60)
                                                                             GGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTA                  >  SRR4302545.3495924/1‑94 (MQ=60)
                                                                               TAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACC                >  SRR4302545.2913756/1‑94 (MQ=60)
                                                                               TAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACC                <  SRR4302545.8521464/94‑1 (MQ=60)
                                                                               TAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACC                <  SRR4302545.8511898/94‑1 (MQ=60)
                                                                                AAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCT               <  SRR4302545.1779337/94‑1 (MQ=60)
                                                                                AAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCT               <  SRR4302545.2077948/94‑1 (MQ=60)
                                                                                AAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACAAAACGCGCGGATAGCCCGATTACCT               <  SRR4302545.376667/94‑1 (MQ=60)
                                                                                 AAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTC              <  SRR4302545.10073252/94‑1 (MQ=60)
                                                                                 AAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTC              <  SRR4302545.10118950/94‑1 (MQ=60)
                                                                                 AAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTC              <  SRR4302545.5091403/94‑1 (MQ=60)
                                                                                 AAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTC              >  SRR4302545.1817789/1‑94 (MQ=60)
                                                                                 AAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTC              <  SRR4302545.2962631/94‑1 (MQ=60)
                                                                                  AACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCG             <  SRR4302545.5269438/94‑1 (MQ=60)
                                                                                  AACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCG             <  SRR4302545.7573020/94‑1 (MQ=60)
                                                                                   ACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCCCTCACTGCGGCGTTCACCCAACGCGCGGATAGCCCGATTCCCTCGG            >  SRR4302545.5923408/1‑94 (MQ=60)
                                                                                   ACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTTACCCAACGCGCGGAAAGCCCGcttaactctg            >  SRR4302545.4212000/1‑84 (MQ=60)
                                                                                    CCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGC           <  SRR4302545.9108823/94‑1 (MQ=60)
                                                                                    CCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCACGGC           <  SRR4302545.3461353/94‑1 (MQ=60)
                                                                                     CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCCCCAAACGCGGGGATAGCCCGATTACCTCGGCG          <  SRR4302545.8703568/94‑1 (MQ=60)
                                                                                     CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG          <  SRR4302545.8703569/94‑1 (MQ=60)
                                                                                     CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG          <  SRR4302545.4576886/94‑1 (MQ=60)
                                                                                     CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG          >  SRR4302545.3106016/1‑94 (MQ=60)
                                                                                      GAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGG         <  SRR4302545.7928417/94‑1 (MQ=60)
                                                                                       AAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC        <  SRR4302545.1281453/94‑1 (MQ=60)
                                                                                        AGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCG       <  SRR4302545.3931353/94‑1 (MQ=60)
                                                                                         GAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGG      >  SRR4302545.5170789/1‑94 (MQ=60)
                                                                                         GAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGG      >  SRR4302545.4372158/1‑94 (MQ=60)
                                                                                          AGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGA     >  SRR4302545.2427126/1‑94 (MQ=60)
                                                                                           GGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCCCGGCGGCGGAA    >  SRR4302545.7188427/1‑94 (MQ=60)
                                                                                            GCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGAAT   <  SRR4302545.5137402/94‑1 (MQ=60)
                                                                                             CAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGAATT  <  SRR4302545.7384227/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGAATT  >  NC_000913/3499134‑3499320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: