Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,499,227 |
T→C |
V115A (GTA→GCA) |
yhfN → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,499,227 | 0 | T | C | 100.0%
| 756.3
/ NA
| 217 | V115A (GTA→GCA) | yhfN | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/101); total (116/101) |
Only 100 of 217 total aligned reads displayed.
CCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCG > NC_000913/3499137‑3499315
|
cGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAAt < 1:2600628/93‑1 (MQ=255)
cGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAAt < 2:1956421/93‑1 (MQ=255)
ggCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATc > 1:4050575/1‑93 (MQ=255)
gCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCa > 2:5373195/1‑93 (MQ=255)
gtGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCaa < 2:5093756/92‑1 (MQ=255)
cttggAGTTCTGCGATAACACCCCGTATCGGCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAATAGGCAATCaa < 1:1089316/90‑1 (MQ=255)
tGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCaaa > 1:2837478/1‑93 (MQ=255)
tGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCaaa < 2:2300579/93‑1 (MQ=255)
ggAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAgc < 2:1869979/93‑1 (MQ=255)
ggAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAgc < 2:1240442/93‑1 (MQ=255)
ggAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAgc > 1:3635940/1‑93 (MQ=255)
aGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAgcgc < 2:5363096/93‑1 (MQ=255)
gTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCt > 1:2117994/1‑93 (MQ=255)
ttCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTg < 1:6103466/93‑1 (MQ=255)
cTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGa > 1:5434230/1‑93 (MQ=255)
cTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGa > 2:355205/1‑93 (MQ=255)
tGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAg > 2:1210599/1‑93 (MQ=255)
gATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTg > 2:712130/1‑93 (MQ=255)
gATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAAACGAAGAGGCAATCAAAGCGCTGGAGCTg > 2:1263681/1‑93 (MQ=255)
aTACCACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGCCTACGGTAAACCCGAAGAGGCAATCAAAGCGCTGGAGCTgg < 2:5762294/93‑1 (MQ=255)
aTAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgg > 1:1003133/1‑93 (MQ=255)
aTAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgg < 1:4212243/93‑1 (MQ=255)
aTAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgg > 1:2154793/1‑93 (MQ=255)
tAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTggg > 1:161052/1‑93 (MQ=255)
tAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTggg > 2:270040/1‑93 (MQ=255)
tAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTggg < 1:4329979/93‑1 (MQ=255)
cacCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgggccg > 1:2546577/1‑93 (MQ=255)
cacCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgggccg < 2:3399520/93‑1 (MQ=255)
ccccGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgggccggg > 1:4027460/1‑93 (MQ=255)
cccGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgcgacgggc > 2:3823107/1‑93 (MQ=255)
ccGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgggccgggcc > 1:4697503/1‑93 (MQ=255)
ccGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTgggccgggcc < 1:5760588/93‑1 (MQ=255)
cGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCt > 1:3496561/1‑93 (MQ=255)
cGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCt < 1:1363255/93‑1 (MQ=255)
cGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCt > 2:5476581/1‑93 (MQ=255)
gTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTg > 1:1485819/1‑93 (MQ=255)
tATCGCCTCGACGATCGTTGCGCAGTACTTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGACGGGACTgc > 2:6215079/1‑93 (MQ=255)
tATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTgc < 1:1948533/93‑1 (MQ=255)
cGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTgcggc < 1:5688618/93‑1 (MQ=255)
gCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTgcggcg > 1:4299305/1‑93 (MQ=255)
ccTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTgcggccc < 1:6252364/93‑3 (MQ=255)
tCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcac > 1:5355533/1‑93 (MQ=255)
tCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcac > 1:5889012/1‑93 (MQ=255)
gacgaTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcactc > 2:3696805/1‑93 (MQ=255)
cgaTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcactcac < 2:2612868/93‑1 (MQ=255)
cgaTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcactcac < 1:930186/93‑1 (MQ=255)
gaTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcactcact < 2:3325850/93‑1 (MQ=255)
gaTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcactcact < 1:5776079/93‑1 (MQ=255)
gaTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGcactcact > 2:3733705/1‑93 (MQ=255)
aTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGGCTGCGGCGCACCCACTg > 1:5453685/1‑93 (MQ=255)
aTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTg > 2:2036305/1‑93 (MQ=255)
aTCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTg > 2:1741419/1‑93 (MQ=255)
tCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTgc < 1:6016240/93‑1 (MQ=255)
gTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTgcgg > 2:4803316/1‑93 (MQ=255)
cgcAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGtt > 1:2253209/1‑93 (MQ=255)
cgcAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGCCCGGGCCTGCGGCGCACTCACTGCGGCGtt > 2:405853/1‑93 (MQ=255)
cAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCa > 2:5276887/1‑93 (MQ=255)
gTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCAcc < 1:4564320/93‑1 (MQ=255)
tAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCa > 2:5965193/1‑93 (MQ=255)
aTTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGGGTTCACCaaa > 1:4943893/1‑93 (MQ=255)
aTTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCaaa > 2:4968191/1‑93 (MQ=255)
aTTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCaaa < 1:6404894/93‑1 (MQ=255)
aTTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCaaa < 1:4962100/93‑1 (MQ=255)
tGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAcg > 1:5927705/1‑93 (MQ=255)
ggCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAcgc < 1:3600003/93‑1 (MQ=255)
ggCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAcgc > 1:2052161/1‑93 (MQ=255)
gTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAcgcgcg > 1:1728479/1‑93 (MQ=255)
gTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAcgcgcg > 2:6048529/1‑93 (MQ=255)
tttCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCgg > 2:562868/1‑93 (MQ=255)
ttCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGa < 2:1043695/93‑1 (MQ=255)
ttCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGa < 2:4774831/93‑1 (MQ=255)
ttCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGa < 1:4487990/93‑1 (MQ=255)
cTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATa < 2:3282735/93‑1 (MQ=255)
cTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATa < 1:5209453/93‑1 (MQ=255)
tGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAg > 1:119660/1‑93 (MQ=255)
gACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGc > 2:3608387/1‑93 (MQ=255)
gACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGc < 1:6189937/93‑1 (MQ=255)
gACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGc < 1:1459649/93‑1 (MQ=255)
cTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGccc < 1:811252/93‑1 (MQ=255)
cGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGAt < 2:3442895/93‑1 (MQ=255)
ggTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGAtt > 1:2740847/1‑93 (MQ=255)
ggTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGAtt < 2:1398550/93‑1 (MQ=255)
gTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTa > 1:4607288/1‑93 (MQ=255)
aaaaCCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTAcc < 1:3263827/93‑1 (MQ=255)
aaaaCCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTAcc < 2:4142570/93‑1 (MQ=255)
aaaCCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCt > 2:3216824/1‑93 (MQ=255)
aaCCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGTGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTc < 1:2295012/93‑1 (MQ=255)
aaCCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTc < 2:1680680/93‑1 (MQ=255)
aCCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcg > 2:1115845/1‑93 (MQ=255)
ccGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcgg > 2:4026562/1‑93 (MQ=255)
cGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggc > 2:3507966/1‑93 (MQ=255)
cGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggc < 2:5418409/93‑1 (MQ=255)
cGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggc < 1:5153185/93‑1 (MQ=255)
cGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggc < 1:4080764/93‑1 (MQ=255)
cGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggc < 1:3357612/93‑1 (MQ=255)
gAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggcg > 2:4367735/1‑93 (MQ=255)
aaGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggcgg > 1:3805678/1‑93 (MQ=255)
agagGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggcggc < 2:4502110/93‑1 (MQ=255)
gagGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTcggcggcg < 2:2961235/93‑1 (MQ=255)
gagGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTccgcggcg > 2:2608229/1‑93 (MQ=255)
|
CCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCG > NC_000913/3499137‑3499315
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑GGAATT > NC_000913/3499134‑3499320
|
TTTCCGGCTGGGAGTTCTGCGATAACGCCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGC < SRR4302537.547980/94‑1 (MQ=60)
TTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCA < SRR4302537.6485026/94‑1 (MQ=60)
TCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAA > SRR4302537.6205101/1‑94 (MQ=60)
CGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATC > SRR4302537.4078898/1‑94 (MQ=60)
CGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATC < SRR4302537.4101346/94‑1 (MQ=60)
CGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATC < SRR4302537.2618815/94‑1 (MQ=60)
GCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAA < SRR4302537.1506167/94‑1 (MQ=60)
CTTGGAGTTCTGCGATAACACCCCGTATCGGCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAATAGGCAATCAAA < SRR4302537.1096842/94‑1 (MQ=60)
CTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAA > SRR4302537.2857331/1‑94 (MQ=60)
TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG < SRR4302537.3793517/94‑1 (MQ=60)
TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG > SRR4302537.5865730/1‑94 (MQ=60)
TGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAG < SRR4302537.6479966/94‑1 (MQ=60)
GGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGC > SRR4302537.3661548/1‑94 (MQ=60)
GGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCG < SRR4302537.1710813/94‑1 (MQ=60)
AGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCT > SRR4302537.2132908/1‑94 (MQ=60)
GTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTG < SRR4302537.6115684/94‑1 (MQ=60)
GTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTG < SRR4302537.2191527/94‑1 (MQ=60)
TTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGG < SRR4302537.6145403/94‑1 (MQ=60)
TCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGA > SRR4302537.5471298/1‑94 (MQ=60)
GATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGG > SRR4302537.1010056/1‑94 (MQ=60)
GATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGG > SRR4302537.2169982/1‑94 (MQ=60)
ATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGG > SRR4302537.162199/1‑94 (MQ=60)
ATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGG < SRR4302537.4241619/94‑1 (MQ=60)
ATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGC > SRR4302537.5149365/1‑94 (MQ=60)
TAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGC < SRR4302537.4360064/94‑1 (MQ=60)
AACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCC > SRR4302537.336899/1‑94 (MQ=60)
ACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCG > SRR4302537.2267342/1‑94 (MQ=60)
ACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCG > SRR4302537.2564419/1‑94 (MQ=60)
CACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGG > SRR4302537.4038668/1‑94 (MQ=60)
CACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGG > SRR4302537.433645/1‑94 (MQ=60)
ACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGG > SRR4302537.4055654/1‑94 (MQ=60)
CCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGC > SRR4302537.1614729/1‑94 (MQ=60)
CCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCC > SRR4302537.4730001/1‑94 (MQ=60)
CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT > SRR4302537.2484704/1‑94 (MQ=60)
CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT > SRR4302537.3521297/1‑94 (MQ=60)
CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT < SRR4302537.5800048/94‑1 (MQ=60)
CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT < SRR4302537.4756713/94‑1 (MQ=60)
CCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCT < SRR4302537.2581106/94‑1 (MQ=60)
CGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTG > SRR4302537.1496156/1‑94 (MQ=60)
CGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTG < SRR4302537.1372751/94‑1 (MQ=60)
TATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCG < SRR4302537.1962084/94‑1 (MQ=60)
TATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCG < SRR4302537.3660554/94‑1 (MQ=60)
ATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGG < SRR4302537.1128296/94‑1 (MQ=60)
CGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCG < SRR4302537.5727529/94‑1 (MQ=60)
CGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCG > SRR4302537.4329184/1‑94 (MQ=60)
GCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGC > SRR4302537.4994676/1‑94 (MQ=60)
CCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCA > SRR4302537.1433821/1‑94 (MQ=60)
CCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCCCA < SRR4302537.6295315/94‑1 (MQ=60)
CTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTATAACCGAAGAGGCAATCAAAGCGCTGGAGCCGGGCCGGGCCTGCGGCGCAC > SRR4302537.4584419/1‑94 (MQ=60)
CTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCAC > SRR4302537.5929418/1‑94 (MQ=60)
CTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCAC > SRR4302537.5392216/1‑94 (MQ=60)
CTCGACGATCGTTGCGCAGTAATTGGCGTTTCAGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCAC > SRR4302537.1043668/1‑94 (MQ=60)
ACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCAC < SRR4302537.3251100/94‑1 (MQ=60)
CGATCGTTGTGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACT < SRR4302537.3905004/94‑1 (MQ=60)
CGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGGCTGCGGCGCACTCACT > SRR4302537.2310192/1‑94 (MQ=60)
CGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACT < SRR4302537.4672879/94‑1 (MQ=60)
CGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACT > SRR4302537.5783850/1‑94 (MQ=60)
CGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACT < SRR4302537.936596/94‑1 (MQ=60)
GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGGCTGCGGCGCACCCACTG > SRR4302537.5490887/1‑94 (MQ=60)
GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTG < SRR4302537.349153/94‑1 (MQ=60)
GATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTG < SRR4302537.5815672/94‑1 (MQ=60)
TCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCG < SRR4302537.6057575/94‑1 (MQ=60)
TCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCG < SRR4302537.149533/94‑1 (MQ=60)
GTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGC > SRR4302537.2916826/1‑94 (MQ=60)
GTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGC > SRR4302537.2151625/1‑94 (MQ=60)
TTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCG < SRR4302537.2655982/94‑1 (MQ=60)
TTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCG > SRR4302537.5483139/1‑94 (MQ=60)
GCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTT > SRR4302537.2269112/1‑94 (MQ=60)
GCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTT > SRR4302537.5691364/1‑94 (MQ=60)
CAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCAC > SRR4302537.985306/1‑94 (MQ=60)
GTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCA > SRR4302537.995230/1‑94 (MQ=60)
GTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCA < SRR4302537.4595916/94‑1 (MQ=60)
GTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCA > SRR4302537.4265605/1‑94 (MQ=60)
TAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAA > SRR4302537.896994/1‑94 (MQ=60)
TAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAA > SRR4302537.4451443/1‑94 (MQ=60)
TAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAA > SRR4302537.5103609/1‑94 (MQ=60)
AATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGGGTTCACCAAA > SRR4302537.4977984/1‑94 (MQ=60)
ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC < SRR4302537.6448487/94‑1 (MQ=60)
ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC < SRR4302537.6412827/94‑1 (MQ=60)
ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC > SRR4302537.441341/1‑94 (MQ=60)
ATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAAC < SRR4302537.4996306/94‑1 (MQ=60)
TTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACG < SRR4302537.5963802/94‑1 (MQ=60)
TTGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACG > SRR4302537.5968384/1‑94 (MQ=60)
TGGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGC > SRR4302537.2066555/1‑94 (MQ=60)
GGCGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCG < SRR4302537.3625377/94‑1 (MQ=60)
CGTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCG > SRR4302537.1740549/1‑94 (MQ=60)
GTTTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGG < SRR4302537.4153645/94‑1 (MQ=60)
TTCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGAT < SRR4302537.4519036/94‑1 (MQ=60)
TCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATA < SRR4302537.1865767/94‑1 (MQ=60)
TCTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATA < SRR4302537.406368/94‑1 (MQ=60)
CTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAG < SRR4302537.5245276/94‑1 (MQ=60)
CTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAG < SRR4302537.6006724/94‑1 (MQ=60)
CTGACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAG > SRR4302537.120517/1‑94 (MQ=60)
GACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCC < SRR4302537.6232582/94‑1 (MQ=60)
GACTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCC < SRR4302537.1469807/94‑1 (MQ=60)
CTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCG < SRR4302537.816814/94‑1 (MQ=60)
CTACGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCG > SRR4302537.1280084/1‑94 (MQ=60)
CGGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATT > SRR4302537.2759969/1‑94 (MQ=60)
GGTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTA > SRR4302537.4639193/1‑94 (MQ=60)
GTAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTAC > SRR4302537.282952/1‑94 (MQ=60)
TAAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACC < SRR4302537.5240406/94‑1 (MQ=60)
AAAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCT < SRR4302537.3286850/94‑1 (MQ=60)
AAACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTC < SRR4302537.5763330/94‑1 (MQ=60)
AACCGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGTGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCG < SRR4302537.2311210/94‑1 (MQ=60)
CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG < SRR4302537.3381396/94‑1 (MQ=60)
CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG < SRR4302537.4109250/94‑1 (MQ=60)
CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG > SRR4302537.5461351/1‑94 (MQ=60)
CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG < SRR4302537.5188693/94‑1 (MQ=60)
CGAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCG > SRR4302537.6292122/1‑94 (MQ=60)
GAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGG < SRR4302537.4601269/94‑1 (MQ=60)
GAAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGG > SRR4302537.3832363/1‑94 (MQ=60)
AAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGG > SRR4302537.5802572/1‑94 (MQ=60)
AAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC > SRR4302537.6188195/1‑94 (MQ=60)
AAGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC > SRR4302537.2121942/1‑94 (MQ=60)
AGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑G > SRR4302537.1997838/1‑94 (MQ=60)
AGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑G > SRR4302537.3597415/1‑94 (MQ=60)
AGAGGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑G > SRR4302537.5382643/1‑94 (MQ=60)
GGCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGACTACCTCGGCGGC‑GGAA > SRR4302537.1876734/1‑94 (MQ=60)
GCAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑GGAAT > SRR4302537.5502167/1‑94 (MQ=60)
CAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGGAAT > SRR4302537.5475974/1‑94 (MQ=60)
CAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑GGAATT < SRR4302537.4130720/94‑1 (MQ=60)
CAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑GGAATT < SRR4302537.506953/94‑1 (MQ=60)
|
TTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGC‑GGAATT > NC_000913/3499134‑3499320
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
