Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,548,005	C→T	G701D (GGT→GAT)	malP ←	maltodextrin phosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,548,005	0	C	T	100.0%	2256.6 / NA	580	G701D (GGT→GAT)	malP	maltodextrin phosphorylase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (302/278); total (302/278)

Only 100 of 663 total aligned reads displayed.

GATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTACCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTT  >  NC_000913/3547914‑3548095

gATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatct                                                                                          <  1:1030545/94‑1 (MQ=255)

gATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatct                                                                                          <  2:9497493/94‑1 (MQ=255)

 aTACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatctt                                                                                         >  2:10330853/1‑94 (MQ=255)

 aTACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatctt                                                                                         <  2:4811927/94‑1 (MQ=255)

 aTACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatctt                                                                                         <  1:6100640/94‑1 (MQ=255)

 aTACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatctt                                                                                         <  2:611337/94‑1 (MQ=255)

   aCTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTttc                                                                                       <  2:6213085/94‑1 (MQ=255)

     tgtgCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTAtctttctt                                                                                     <  2:1272595/94‑1 (MQ=255)

       tgCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTttcttca                                                                                   <  1:806085/94‑2 (MQ=255)

       tgCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTcc                                                                                   >  1:167011/1‑94 (MQ=255)

        gcagcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCg                                                                                  <  2:5545284/94‑1 (MQ=255)

        acagcaTATGGTAGACGGCATGCTTATCGCCGTCACTGTATTTACCGCTTACCAGCTCTTTCAATACTGCGTCCAGCACATTATCTTTCTTCCg                                                                                  <  1:9353066/93‑1 (MQ=255)

          agcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGcc                                                                                >  1:6779188/1‑94 (MQ=255)

          agcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGcc                                                                                >  1:1186122/1‑94 (MQ=255)

            caTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAt                                                                              >  1:199158/1‑94 (MQ=255)

                 ggTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAc                                                                         >  1:1396401/1‑94 (MQ=255)

                 ggTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAc                                                                         <  1:5577014/94‑1 (MQ=255)

                  gTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAcc                                                                        <  1:8245632/94‑1 (MQ=255)

                  gTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAcc                                                                        >  1:5231673/1‑94 (MQ=255)

                   tCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCg                                                                       <  1:8500662/94‑1 (MQ=255)

                   tCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCg                                                                       >  2:2008625/1‑94 (MQ=255)

                   tCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCg                                                                       <  2:5210092/94‑1 (MQ=255)

                    cGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCgg                                                                      <  2:352959/94‑1 (MQ=255)

                    cGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCgg                                                                      <  2:8993617/94‑1 (MQ=255)

                    cGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCgg                                                                      >  1:2497832/1‑94 (MQ=255)

                     gAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCggg                                                                     >  1:1340832/1‑94 (MQ=255)

                     gAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCggg                                                                     >  2:3144382/1‑94 (MQ=255)

                      aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCgggg                                                                    >  1:6540477/1‑93 (MQ=255)

                      aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGt                                                                    <  1:4587743/94‑1 (MQ=255)

                      aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGt                                                                    <  2:2518858/94‑1 (MQ=255)

                      aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGt                                                                    >  2:7160021/1‑94 (MQ=255)

                       aGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTc                                                                   >  2:8856372/1‑94 (MQ=255)

                       aGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTc                                                                   <  1:9622683/94‑1 (MQ=255)

                         gCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGt                                                                 <  2:5492392/94‑1 (MQ=255)

                          cATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                                <  1:1452765/94‑1 (MQ=255)

                              cTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCt                                                            >  2:6564634/1‑94 (MQ=255)

                               ttATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCtt                                                           >  2:7659364/1‑94 (MQ=255)

                               ttATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTACAGCACCTTATCTTTCTTCCGCCATTTCTCCGTGTCGCAGCCtt                                                           >  1:1864638/1‑94 (MQ=255)

                                tATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCttt                                                          <  2:7907039/94‑1 (MQ=255)

                                tATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCttt                                                          >  2:1466037/1‑94 (MQ=255)

                                  tCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTgg                                                        >  1:10555337/1‑94 (MQ=255)

                                  tCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTgg                                                        <  2:5083315/94‑1 (MQ=255)

                                   cGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGc                                                       <  1:5380020/94‑1 (MQ=255)

                                    gCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGcc                                                      >  1:6372838/1‑94 (MQ=255)

                                    gCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGcc                                                      >  2:8126468/1‑94 (MQ=255)

                                    gCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGcc                                                      <  2:8288673/94‑1 (MQ=255)

                                    gCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGcc                                                      >  1:2314249/1‑94 (MQ=255)

                                     ccGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCa                                                     <  2:3407714/94‑1 (MQ=255)

                                     ccGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCa                                                     >  2:2206885/1‑94 (MQ=255)

                                     ccGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCa                                                     >  2:10028109/1‑94 (MQ=255)

                                     ccGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCa                                                     >  1:2168231/1‑94 (MQ=255)

                                        tCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGaa                                                  >  2:4666290/1‑94 (MQ=255)

                                         cGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCATTTGGCCAGAAt                                                 >  1:302802/1‑94 (MQ=255)

                                         cGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGACTTTTGCCAGGAt                                                 >  1:9841045/1‑94 (MQ=255)

                                          gCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAtt                                                <  1:3259580/94‑1 (MQ=255)

                                           cTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTg                                               >  2:1758529/1‑94 (MQ=255)

                                           cTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTg                                               >  1:6981308/1‑94 (MQ=255)

                                            tGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGc                                              >  2:5683905/1‑94 (MQ=255)

                                            tGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGc                                              >  1:8955083/1‑94 (MQ=255)

                                            tGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGc                                              >  1:2885484/1‑94 (MQ=255)

                                               aTTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCtt                                           <  1:10498658/94‑1 (MQ=255)

                                               aTTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCtt                                           <  2:8601019/94‑1 (MQ=255)

                                                  tACCGCTTTCCAGCTCTTTCAGTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAc                                        >  1:9161652/1‑94 (MQ=255)

                                                  tACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAc                                        >  1:815188/1‑94 (MQ=255)

                                                   aCCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACt                                       >  1:587809/1‑94 (MQ=255)

                                                    ccGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACtt                                      <  2:6819239/94‑1 (MQ=255)

                                                     cGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTg                                     >  2:10568642/1‑94 (MQ=255)

                                                     cGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTg                                     <  2:5868960/94‑1 (MQ=255)

                                                     cGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTg                                     <  1:4426243/94‑1 (MQ=255)

                                                       cTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGtt                                   <  1:71492/94‑1 (MQ=255)

                                                         ttCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTcc                                 <  1:4369385/94‑1 (MQ=255)

                                                           ccAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAc                               >  1:3641022/1‑94 (MQ=255)

                                                           ccAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAc                               >  2:4161292/1‑94 (MQ=255)

                                                            cAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACg                              >  2:6490597/1‑94 (MQ=255)

                                                             aGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAAgg                             >  1:753509/1‑94 (MQ=255)

                                                               ctctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTa                           >  1:732021/1‑94 (MQ=255)

                                                                tctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                          <  2:4420630/94‑1 (MQ=255)

                                                                cctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTGCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                          <  2:7304888/93‑1 (MQ=255)

                                                                  tttCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGa                        <  1:10025188/94‑1 (MQ=255)

                                                                      aaTACTGCTTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaa                    <  1:2735247/94‑1 (MQ=255)

                                                                      aaTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaa                    >  1:5691649/1‑94 (MQ=255)

                                                                      aaTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaa                    <  2:3747017/94‑1 (MQ=255)

                                                                       aTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaaa                   <  1:4916537/94‑1 (MQ=255)

                                                                       aTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaaa                   >  2:3947854/1‑94 (MQ=255)

                                                                          cTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAt                <  2:6994239/94‑1 (MQ=255)

                                                                          cTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAt                <  2:3226674/94‑1 (MQ=255)

                                                                          cTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAt                <  2:8719105/94‑1 (MQ=255)

                                                                          cTGCGCCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAt                <  1:4016095/94‑1 (MQ=255)

                                                                            gCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaa              >  1:7754001/1‑94 (MQ=255)

                                                                             cGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa             <  2:9756602/94‑1 (MQ=255)

                                                                                ccAGCACCTTATCTTTCTTCCTCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGat          <  2:2777820/94‑1 (MQ=255)

                                                                                ccAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGat          >  2:2920314/1‑94 (MQ=255)

                                                                                   gCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtt       >  2:7464392/1‑94 (MQ=255)

                                                                                   gCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtt       <  1:788098/94‑1 (MQ=255)

                                                                                    cACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAttt      >  1:3777417/1‑94 (MQ=255)

                                                                                    cACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAttt      <  1:8722725/94‑1 (MQ=255)

                                                                                       cttatcttTCTTCCGCCATTTCAGCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttct   <  2:9659830/94‑1 (MQ=255)

                                                                                       cttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttct   >  2:1630230/1‑94 (MQ=255)

                                                                                       cttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttct   <  2:8465523/94‑1 (MQ=255)

                                                                                        ttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttctt  >  2:9198300/1‑94 (MQ=255)

GATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTACCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTT  >  NC_000913/3547914‑3548095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 290 total aligned reads displayed.

CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAG  >  NC_000913/3553883‑3554068

CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTC                                                                                              <  SRR4302545.6498031/94‑1 (MQ=60)

CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTC                                                                                              >  SRR4302545.297850/1‑94 (MQ=60)

 CCACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCG                                                                                             <  SRR4302545.3020144/94‑1 (MQ=60)

 ACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCG                                                                                             >  SRR4302545.362304/1‑94 (MQ=60)

 ACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCG                                                                                             >  SRR4302545.10404862/1‑94 (MQ=60)

 ACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCG                                                                                             >  SRR4302545.5053284/1‑94 (MQ=60)

   ACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTT                                                                                           <  SRR4302545.9469719/94‑1 (MQ=60)

    CCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTG                                                                                          >  SRR4302545.9797720/1‑94 (MQ=60)

    CCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTG                                                                                          >  SRR4302545.2272583/1‑94 (MQ=60)

    CCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTG                                                                                          <  SRR4302545.10404106/94‑1 (MQ=60)

    CCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTG                                                                                          >  SRR4302545.10070425/1‑94 (MQ=60)

     CAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGC                                                                                         <  SRR4302545.5700174/94‑1 (MQ=60)

      AGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCC                                                                                        <  SRR4302545.5352565/94‑1 (MQ=60)

      AGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCC                                                                                        >  SRR4302545.3149908/1‑94 (MQ=60)

        CTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCAC                                                                                      <  SRR4302545.2172374/94‑1 (MQ=60)

         TAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACC                                                                                     >  SRR4302545.10932768/1‑94 (MQ=60)

         TAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACC                                                                                     <  SRR4302545.6317529/94‑1 (MQ=60)

         TAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACC                                                                                     <  SRR4302545.10411766/94‑1 (MQ=60)

         TAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACC                                                                                     <  SRR4302545.4774498/94‑1 (MQ=60)

          AATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCA                                                                                    >  SRR4302545.6704367/1‑94 (MQ=60)

          AATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCA                                                                                    >  SRR4302545.1110347/1‑94 (MQ=60)

          AATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCA                                                                                    >  SRR4302545.10015354/1‑94 (MQ=60)

            TAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACA                                                                                  <  SRR4302545.5629816/94‑1 (MQ=60)

            TAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACA                                                                                  >  SRR4302545.2349763/1‑94 (MQ=60)

             AGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGCGACTTTCGTTGCCACCACAC                                                                                 <  SRR4302545.1714900/94‑1 (MQ=60)

             AGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACAC                                                                                 <  SRR4302545.6026219/94‑1 (MQ=60)

              GAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACC                                                                                <  SRR4302545.10926418/94‑1 (MQ=60)

              GAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACC                                                                                >  SRR4302545.4818681/1‑94 (MQ=60)

                ACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGC                                                                              >  SRR4302545.8900632/1‑94 (MQ=60)

                 CTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCC                                                                             >  SRR4302545.6994638/1‑94 (MQ=60)

                 CTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGAATTTCGTTGCCACCACACCGCC                                                                             >  SRR4302545.3689443/1‑94 (MQ=60)

                  TTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGTTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCT                                                                            <  SRR4302545.6789033/94‑1 (MQ=60)

                  TTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCT                                                                            <  SRR4302545.6789032/94‑1 (MQ=60)

                    CTCCGCGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCC                                                                          <  SRR4302545.8123067/94‑1 (MQ=60)

                    CTCCACGCATCTGCACAATGTTCCCGCGCTCGCCCAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTAGTTGCCAACACACCGCCTTC                                                                          >  SRR4302545.2632332/1‑94 (MQ=60)

                    CTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACCCCGCCTCC                                                                          <  SRR4302545.1642160/94‑1 (MQ=60)

                    CTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCC                                                                          <  SRR4302545.6202704/94‑1 (MQ=60)

                     TCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCG                                                                         <  SRR4302545.4243545/94‑1 (MQ=60)

                      CCACGCATCTTCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGG                                                                        <  SRR4302545.1267271/94‑1 (MQ=60)

                      CCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGG                                                                        >  SRR4302545.505716/1‑94 (MQ=60)

                      CCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGG                                                                        >  SRR4302545.3245852/1‑94 (MQ=60)

                       CACGCATCTGCACAATGTTCCCGCGCTCTCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGC                                                                       <  SRR4302545.1548830/94‑1 (MQ=60)

                       CACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGC                                                                       <  SRR4302545.1030470/94‑1 (MQ=60)

                       CACGCATCTGCACAATGTCCCCGCGCTCTCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGC                                                                       <  SRR4302545.1548505/94‑1 (MQ=60)

                        CCGCATCTGCACAATTTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCA                                                                      <  SRR4302545.10192999/94‑1 (MQ=60)

                        ACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCA                                                                      <  SRR4302545.10054652/94‑1 (MQ=60)

                        ACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCA                                                                      <  SRR4302545.8476148/94‑1 (MQ=60)

                         CGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAG                                                                     <  SRR4302545.9242865/94‑1 (MQ=60)

                          GCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGG                                                                    <  SRR4302545.7472806/94‑1 (MQ=60)

                           CATATGCAAAATGTTCCCGCGCGCGCCACGTTGCAAGGAGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCATCCGGCAGAG                                                                   >  SRR4302545.7074389/1‑94 (MQ=60)

                            ATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGT                                                                  <  SRR4302545.9316027/94‑1 (MQ=60)

                            ATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGT                                                                  >  SRR4302545.4839833/1‑94 (MQ=60)

                             TCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTA                                                                 <  SRR4302545.3376124/94‑1 (MQ=60)

                             TCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTA                                                                 <  SRR4302545.2007345/94‑1 (MQ=60)

                              CTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAA                                                                >  SRR4302545.3015319/1‑94 (MQ=60)

                               TGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAA                                                               >  SRR4302545.6537839/1‑94 (MQ=60)

                               TGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGCAAA                                                               >  SRR4302545.1381094/1‑94 (MQ=60)

                                GCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAA                                                              >  SRR4302545.6223683/1‑94 (MQ=60)

                                  CCAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAAC                                                            <  SRR4302545.2035646/94‑1 (MQ=60)

                                    AATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCG                                                          <  SRR4302545.6532233/94‑1 (MQ=60)

                                    AATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCG                                                          >  SRR4302545.6511615/1‑94 (MQ=60)

                                    AATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCG                                                          >  SRR4302545.796759/1‑94 (MQ=60)

                                    AATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCG                                                          >  SRR4302545.5597328/1‑94 (MQ=60)

                                     ATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGT                                                         <  SRR4302545.1102511/94‑1 (MQ=60)

                                     ATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGT                                                         <  SRR4302545.9744383/94‑1 (MQ=60)

                                       GTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGG                                                       <  SRR4302545.7710176/94‑1 (MQ=60)

                                       GTTCCCGCGCTCGCCAAGGTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGG                                                       >  SRR4302545.9663885/1‑94 (MQ=60)

                                        TTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGC                                                      <  SRR4302545.4780723/94‑1 (MQ=60)

                                         TCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCG                                                     >  SRR4302545.8050008/1‑94 (MQ=60)

                                         TCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCG                                                     <  SRR4302545.8493782/94‑1 (MQ=60)

                                         TCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCG                                                     <  SRR4302545.1722401/94‑1 (MQ=60)

                                         TCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTCGCG                                                     >  SRR4302545.6073738/1‑94 (MQ=60)

                                          CCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGT                                                    >  SRR4302545.277366/1‑94 (MQ=60)

                                          CCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGAATTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGT                                                    <  SRR4302545.3983866/94‑1 (MQ=60)

                                           CCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTA                                                   >  SRR4302545.10523642/1‑94 (MQ=60)

                                           CCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTA                                                   <  SRR4302545.7000530/94‑1 (MQ=60)

                                            CGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAA                                                  >  SRR4302545.6243544/1‑94 (MQ=60)

                                            CGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAA                                                  >  SRR4302545.5870165/1‑94 (MQ=60)

                                            CGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAA                                                  <  SRR4302545.7753425/94‑1 (MQ=60)

                                            CGCGCGCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAA                                                  <  SRR4302545.4951503/94‑1 (MQ=60)

                                             GCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAAC                                                 >  SRR4302545.7446125/1‑94 (MQ=60)

                                             GCGCGCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAAC                                                 <  SRR4302545.2340153/94‑1 (MQ=60)

                                              gcCTCGCCAAGTTGCAAGTCGTTATACGATCCCACGGGAGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACA                                                <  SRR4302545.3757636/92‑1 (MQ=60)

                                              CGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCCCCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACA                                                <  SRR4302545.7940377/94‑1 (MQ=60)

                                              CGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACA                                                <  SRR4302545.2847661/94‑1 (MQ=60)

                                               GCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACTGGCGAGACTTTTGTTGCCACCACACTGCTTCCGGGCGGGTAATAACCCTGGCGTGACAG                                               >  SRR4302545.1795993/1‑94 (MQ=44)

                                                CTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGC                                              <  SRR4302545.10384189/94‑1 (MQ=60)

                                                CTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGC                                              <  SRR4302545.8465136/94‑1 (MQ=60)

                                                CTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGC                                              <  SRR4302545.4018220/94‑1 (MQ=60)

                                                CTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGC                                              >  SRR4302545.10828047/1‑94 (MQ=60)

                                                CTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGC                                              >  SRR4302545.3384185/1‑94 (MQ=60)

                                                CTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGC                                              <  SRR4302545.5186934/94‑1 (MQ=60)

                                                 TCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTCACAGCG                                             >  SRR4302545.4125491/1‑94 (MQ=60)

                                                 TCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCG                                             >  SRR4302545.2376615/1‑94 (MQ=60)

                                                 TCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCG                                             <  SRR4302545.10575077/94‑1 (MQ=60)

                                                  CGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGT                                            >  SRR4302545.7392351/1‑94 (MQ=60)

                                                  CGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGT                                            >  SRR4302545.8785536/1‑94 (MQ=60)

                                                   GCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTG                                           <  SRR4302545.7303549/94‑1 (MQ=60)

                                                   GCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCCTGGCGTAACACCGTG                                           >  SRR4302545.7384123/1‑94 (MQ=60)

                                                    cccagtgaCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          <  SRR4302545.7807854/86‑1 (MQ=60)

                                                    CCAAGTTGNANGGTGTTAAACNATNCCANGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          <  SRR4302545.588431/94‑1 (MQ=60)

                                                    CCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          >  SRR4302545.835676/1‑94 (MQ=60)

                                                    CCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          >  SRR4302545.10584686/1‑94 (MQ=60)

                                                    CCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          <  SRR4302545.7807853/94‑1 (MQ=60)

                                                    CCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          >  SRR4302545.3546669/1‑94 (MQ=60)

                                                    CCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGG                                          >  SRR4302545.4497027/1‑94 (MQ=60)

                                                    CCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGGGGCGTAACAGCGTGG                                          >  SRR4302545.3546668/1‑94 (MQ=60)

                                                     CAAGTTGCAAGGTGTTAAACGCTGCCACGGGGGAGACTTTCGTTGCCACCACACCGGCTCCGGCAGGGTAGAAACCctcgcgtacacgagtggt                                         >  SRR4302545.6013564/1‑76 (MQ=60)

                                                     CAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGT                                         >  SRR4302545.3692491/1‑94 (MQ=60)

                                                     CAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGT                                         >  SRR4302545.9582572/1‑94 (MQ=60)

                                                     CAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGT                                         <  SRR4302545.2320602/94‑1 (MQ=60)

                                                     CAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGT                                         >  SRR4302545.2471931/1‑94 (MQ=60)

                                                      AAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTT                                        >  SRR4302545.4976440/1‑94 (MQ=60)

                                                      AAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTT                                        <  SRR4302545.4787996/94‑1 (MQ=60)

                                                      AAGCTGCAAGGTGTTAAACGATGCCACGGGCGAGGATTTCGTTGCCACCACACCGCCTCCGGCAGGGCAAAAACCGTGGCGTAACAGCGTGGTT                                        >  SRR4302545.7324419/1‑94 (MQ=60)

                                                       AGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTT                                       <  SRR4302545.10151614/94‑1 (MQ=60)

                                                       AGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTT                                       >  SRR4302545.1064295/1‑94 (MQ=60)

                                                        GTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTG                                      >  SRR4302545.6581477/1‑94 (MQ=60)

                                                         TTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGC                                     >  SRR4302545.9904078/1‑94 (MQ=60)

                                                           GCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTG                                   <  SRR4302545.7743907/94‑1 (MQ=60)

                                                           GCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTG                                   >  SRR4302545.538124/1‑94 (MQ=60)

                                                           GCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTG                                   <  SRR4302545.6806140/94‑1 (MQ=60)

                                                           GCAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTG                                   <  SRR4302545.2671952/94‑1 (MQ=60)

                                                            CAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGA                                  >  SRR4302545.2018774/1‑94 (MQ=60)

                                                            CAAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGA                                  >  SRR4302545.79781/1‑94 (MQ=60)

                                                             AAGGTGTTAAACGATGCCACGGGCTAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGAT                                 <  SRR4302545.9042665/94‑1 (MQ=60)

                                                             AAGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGAT                                 >  SRR4302545.5294377/1‑94 (MQ=60)

                                                             AAGGTGTTAAACGATGCCACGGGCAAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGAT                                 <  SRR4302545.9739866/94‑1 (MQ=60)

                                                              AGGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATG                                >  SRR4302545.3090591/1‑94 (MQ=60)

                                                               GGTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGA                               <  SRR4302545.5105526/94‑1 (MQ=60)

                                                                GTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAA                              <  SRR4302545.2100376/94‑1 (MQ=60)

                                                                GTGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAA                              >  SRR4302545.9290046/1‑94 (MQ=60)

                                                                 TGTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAAT                             >  SRR4302545.7861931/1‑94 (MQ=60)

                                                                  GTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATT                            >  SRR4302545.5122153/1‑94 (MQ=60)

                                                                  GTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATT                            <  SRR4302545.10478143/94‑1 (MQ=60)

                                                                  GTTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATT                            >  SRR4302545.4296330/1‑94 (MQ=60)

                                                                   TTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTC                           <  SRR4302545.2384258/94‑1 (MQ=60)

                                                                   TTAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTC                           <  SRR4302545.1031645/94‑1 (MQ=60)

                                                                    TAAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCC                          >  SRR4302545.8610410/1‑94 (MQ=60)

                                                                     AAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCT                         <  SRR4302545.4422397/94‑1 (MQ=60)

                                                                     AAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCT                         >  SRR4302545.4255942/1‑94 (MQ=60)

                                                                     AAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCT                         >  SRR4302545.2866034/1‑94 (MQ=60)

                                                                     AAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCT                         <  SRR4302545.4961242/94‑1 (MQ=60)

                                                                     AAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCT                         <  SRR4302545.9582775/94‑1 (MQ=60)

                                                                     AAACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCT                         <  SRR4302545.4308588/94‑1 (MQ=60)

                                                                      AACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTA                        <  SRR4302545.9463802/94‑1 (MQ=60)

                                                                      AACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTA                        >  SRR4302545.3693843/1‑94 (MQ=60)

                                                                       ACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTAT                       <  SRR4302545.4796642/94‑1 (MQ=60)

                                                                       ACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTAT                       <  SRR4302545.922870/94‑1 (MQ=60)

                                                                       ACGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTAT                       <  SRR4302545.2492368/94‑1 (MQ=60)

                                                                        CGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATT                      >  SRR4302545.3067950/1‑94 (MQ=60)

                                                                        CGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATT                      >  SRR4302545.6676175/1‑94 (MQ=60)

                                                                        CGATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATT                      >  SRR4302545.2488268/1‑94 (MQ=60)

                                                                         GATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTT                     >  SRR4302545.1465081/1‑94 (MQ=60)

                                                                         GATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTT                     <  SRR4302545.9368903/94‑1 (MQ=60)

                                                                         GATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTT                     >  SRR4302545.2014202/1‑94 (MQ=60)

                                                                         GATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTT                     <  SRR4302545.4512170/94‑1 (MQ=60)

                                                                         GATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTT                     <  SRR4302545.5514786/94‑1 (MQ=60)

                                                                          ATGCCACGGGCGAGTCTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTT                    <  SRR4302545.610331/94‑1 (MQ=60)

                                                                          ATGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTT                    >  SRR4302545.1963160/1‑94 (MQ=60)

                                                                           TGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTC                   >  SRR4302545.4121833/1‑94 (MQ=60)

                                                                           TGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTC                   <  SRR4302545.5475058/94‑1 (MQ=60)

                                                                           TGCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTC                   <  SRR4302545.5475059/94‑1 (MQ=60)

                                                                            GCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCG                  <  SRR4302545.4337559/94‑1 (MQ=60)

                                                                            GCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCG                  <  SRR4302545.2411604/94‑1 (MQ=60)

                                                                            GCCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCG                  <  SRR4302545.3465965/94‑1 (MQ=60)

                                                                             CCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGC                 >  SRR4302545.2966973/1‑94 (MQ=60)

                                                                             CCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGC                 >  SRR4302545.6326177/1‑94 (MQ=60)

                                                                             CCACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGC                 >  SRR4302545.10653994/1‑94 (MQ=60)

                                                                             CCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGC                 >  SRR4302545.5656876/1‑94 (MQ=60)

                                                                              CACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCC                >  SRR4302545.10346927/1‑94 (MQ=60)

                                                                              CACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCCTGGTTTGCTGATGAATTCCTATTTTCGCC                >  SRR4302545.5912516/1‑94 (MQ=60)

                                                                               CCGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCA               <  SRR4302545.9535234/94‑1 (MQ=60)

                                                                               ACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCA               <  SRR4302545.1429619/94‑1 (MQ=60)

                                                                               ACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCA               >  SRR4302545.210295/1‑94 (MQ=60)

                                                                               ACGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCA               <  SRR4302545.2724749/94‑1 (MQ=60)

                                                                                CGGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAG              >  SRR4302545.8252295/1‑94 (MQ=60)

                                                                                 GGGCGAGACTTTGATTGCCACCACACCGACTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGGGTGCTGATGAATTCCTATTTTCGCCAGC             >  SRR4302545.6041331/1‑94 (MQ=60)

                                                                                 GGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTTGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCTCCAGC             >  SRR4302545.9871263/1‑94 (MQ=60)

                                                                                 GGGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGC             >  SRR4302545.6018855/1‑94 (MQ=60)

                                                                                  GGCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCA            <  SRR4302545.536856/94‑1 (MQ=60)

                                                                                   GCGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAG           <  SRR4302545.4824871/94‑1 (MQ=60)

                                                                                    CGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGC          <  SRR4302545.2252843/94‑1 (MQ=60)

                                                                                    CGAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGC          >  SRR4302545.9365525/1‑94 (MQ=60)

                                                                                    CGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGC          <  SRR4302545.8323622/94‑1 (MQ=60)

                                                                                     GAGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCG         >  SRR4302545.7689127/1‑94 (MQ=60)

                                                                                     GAGACTTTCGTTACCACCACACCGCCTCCAGCAGGGTGAAAACCGTGGCGTAACAGCATGGTTTGCTGATGAATTCCTATTTTCGCgcgcaccg         >  SRR4302545.8529460/1‑86 (MQ=60)

                                                                                      AGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGG        >  SRR4302545.3820095/1‑94 (MQ=60)

                                                                                      AGACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGCTTGCTGATGAATTCCTATTTTCGCCAGCAGCGG        >  SRR4302545.4590382/1‑94 (MQ=60)

                                                                                        ACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCT      <  SRR4302545.4873501/94‑1 (MQ=60)

                                                                                        ACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCT      >  SRR4302545.4166914/1‑94 (MQ=60)

                                                                                        ACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCT      <  SRR4302545.9776572/94‑1 (MQ=60)

                                                                                        ACTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCT      <  SRR4302545.296130/94‑1 (MQ=60)

                                                                                         CTTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTC     <  SRR4302545.8152039/94‑1 (MQ=60)

                                                                                         CTTTCGTTGCCACCACACAGCCTCCGGCAGGGTAAAAACCGCGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCcgcgggta     >  SRR4302545.9226759/1‑86 (MQ=60)

                                                                                          TTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCTGCTCC    >  SRR4302545.8923334/1‑94 (MQ=60)

                                                                                          TTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCC    <  SRR4302545.9094/94‑1 (MQ=60)

                                                                                          TTTCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCC    <  SRR4302545.5548937/94‑1 (MQ=60)

                                                                                           TTCGTTGCCACCACCCCGCCGCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTGGCTGATGAATTCCAATTTTCGCCAGCAGCGGCTCCA   <  SRR4302545.6951873/94‑1 (MQ=60)

                                                                                            TCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAG  <  SRR4302545.9752059/94‑1 (MQ=60)

CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAG  >  NC_000913/3553883‑3554068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`