Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,554,113	Δ1 bp	coding (372/396 nt)	yhgKJ ←	RNA phosphage cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,554,113	0	C	.	99.8%	1929.0 / ‑2.3	432	coding (372/396 nt)	yhgKJ	RNA phosphage cyclase
Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (212/217); total (214/218)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.15e-01

Only 100 of 479 total aligned reads displayed.

GTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCG‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCG  >  NC_000913/3554025‑3554200

gTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑c                                                                                     >  2:8907932/1‑94 (MQ=255)

 tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                    >  1:5535319/1‑93 (MQ=255)

 tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                    >  1:7130795/1‑93 (MQ=255)

 tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                    <  1:2243226/94‑2 (MQ=255)

 tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                    <  2:2482338/94‑2 (MQ=255)

      tGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGTCGCCGACGGGTTATCGGT‑GCCGCCGCTCa                                                                                <  1:76598/94‑1 (MQ=255)

      tGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCa                                                                                <  1:3097515/94‑1 (MQ=255)

       gCTGATGACTTCCTATTGTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAc                                                                               <  1:4120671/94‑1 (MQ=255)

       gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAc                                                                               >  1:3309318/1‑94 (MQ=255)

        cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACt                                                                              >  2:10545650/1‑94 (MQ=255)

         tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACtt                                                                             <  2:9213659/94‑1 (MQ=255)

         tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACtt                                                                             <  2:4144306/94‑1 (MQ=255)

         tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACtt                                                                             <  1:9269486/94‑1 (MQ=255)

         tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGGTATCGGT‑GCCGCCGCTCACtt                                                                             >  2:331849/1‑94 (MQ=255)

           atgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCa                                                                           >  2:876801/1‑94 (MQ=255)

            tgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCaa                                                                          >  1:4897493/1‑94 (MQ=255)

             taaTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAac                                                                         <  1:10348288/93‑1 (MQ=255)

              aaTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAaca                                                                        >  1:967126/1‑94 (MQ=255)

              aaTTCCTATTTGCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAaca                                                                        <  1:2935548/94‑1 (MQ=255)

               aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAacac                                                                       >  2:8645027/1‑94 (MQ=255)

                ttCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAcg                                                                      >  2:9448629/1‑94 (MQ=255)

                 tCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAcgc                                                                     >  1:10090245/1‑94 (MQ=255)

                 tCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAcgc                                                                     <  2:1286671/94‑1 (MQ=255)

                     tttttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAg                                                                 <  2:10174008/93‑1 (MQ=255)

                     aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCTCTTCCACACGCGAAg                                                                 >  1:6074339/1‑94 (MQ=255)

                     aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAg                                                                 <  2:2726899/94‑1 (MQ=255)

                      ttttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAgg                                                                >  1:1891062/1‑94 (MQ=255)

                       tttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGACggg                                                               >  2:3901894/1‑93 (MQ=255)

                         tCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTcc                                                             <  1:1417007/94‑1 (MQ=255)

                          cGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCa                                                            >  1:2754193/1‑94 (MQ=255)

                          cGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCa                                                            >  1:319301/1‑94 (MQ=255)

                           gCCATCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCAt                                                           <  2:7417492/94‑1 (MQ=255)

                           gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCAt                                                           >  2:168509/1‑94 (MQ=255)

                            ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATc                                                          <  2:4304192/94‑1 (MQ=255)

                            ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATc                                                          <  1:17166/94‑1 (MQ=255)

                             cagcagCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                         <  1:1556073/94‑1 (MQ=255)

                             cagcagCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                         <  2:2057901/94‑1 (MQ=255)

                             cagcagCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                         >  1:7349304/1‑94 (MQ=255)

                              cgcagcGGCTCCAGCACCCGGCGAATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGTTCACTTCAACACGCGAAGGTCCATCgg                                                        <  1:7606550/93‑1 (MQ=255)

                              agcagcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                        >  1:4532481/1‑94 (MQ=255)

                              agcagcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                        >  1:4440293/1‑94 (MQ=255)

                              agcagcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                        >  1:2590394/1‑94 (MQ=255)

                              agcagcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                        >  1:5726892/1‑94 (MQ=255)

                                  gcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCaaa                                                    >  2:8231654/1‑94 (MQ=255)

                                   tggCTCCAGCACCCGGCGCATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAc                                                   >  1:5313705/2‑94 (MQ=255)

                                   cGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCCAAc                                                   >  1:8821211/1‑94 (MQ=255)

                                   cGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAc                                                   <  1:9095445/94‑1 (MQ=255)

                                   cGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAc                                                   <  2:6807570/94‑1 (MQ=255)

                                    ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCACAcc                                                  >  1:1068617/1‑94 (MQ=255)

                                    ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAcc                                                  <  2:5904165/94‑1 (MQ=255)

                                    ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAcc                                                  >  2:6696405/1‑94 (MQ=255)

                                       gccAGAACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcaca                                               <  2:5794542/93‑1 (MQ=255)

                                         cAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCACACCACAgc                                             >  2:4753196/1‑94 (MQ=255)

                                         cAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                             >  1:6143290/1‑94 (MQ=255)

                                         cAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                             <  1:4329248/94‑1 (MQ=255)

                                             aCCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCgg                                        >  2:9291484/1‑94 (MQ=255)

                                              cccGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCggg                                       <  2:3074453/94‑1 (MQ=255)

                                              cccGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCggg                                       <  1:6423714/94‑1 (MQ=255)

                                                cggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGgca                                     <  2:9620534/94‑1 (MQ=255)

                                                cggcggATAAAACCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGgca                                     <  2:6352021/94‑1 (MQ=255)

                                                 ggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGgcag                                    >  2:4586905/1‑94 (MQ=255)

                                                  gcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGgcagc                                   <  2:10023367/94‑1 (MQ=255)

                                                   cggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGgcagca                                  >  1:3443021/1‑94 (MQ=255)

                                                    ggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCAc                                 >  2:3266906/1‑94 (MQ=255)

                                                    ggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCAc                                 <  2:6107240/94‑1 (MQ=255)

                                                     gATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCAcc                                <  1:3607382/94‑1 (MQ=255)

                                                      aTAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCg                               >  2:8379850/1‑94 (MQ=255)

                                                      aTAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCg                               >  1:7937893/1‑94 (MQ=255)

                                                      aTAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCg                               >  1:3955006/1‑94 (MQ=255)

                                                       tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGt                              <  2:2951400/94‑1 (MQ=255)

                                                       tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGt                              >  2:3760391/1‑94 (MQ=255)

                                                       tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGt                              >  1:6007856/1‑94 (MQ=255)

                                                             ccgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTgcag                        >  1:4750329/5‑94 (MQ=255)

                                                             ccgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTgcag                        <  2:349591/90‑1 (MQ=255)

                                                              cgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGTCGCTCACTTCAACACGCGAAGGTCCATCGGCAAGCCACAGC‑GCGGGCAGCACCGTTTgcagc                       <  2:3601613/91‑1 (MQ=255)

                                                              cgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTgcagc                       <  2:9779635/91‑1 (MQ=255)

                                                               gcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTgcagca                      <  2:8537915/92‑1 (MQ=255)

                                                                caGGGGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCAc                     <  1:8595008/93‑1 (MQ=255)

                                                                 cggcggcGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCAcc                    <  1:2397229/93‑1 (MQ=255)

                                                                   gcggcgCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAg                  <  2:5243173/94‑1 (MQ=255)

                                                                   gcggcgCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAg                  <  2:779236/94‑1 (MQ=255)

                                                                      gcgcCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGt               <  2:6489735/94‑1 (MQ=255)

                                                                        gcCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTAc             <  2:1406540/94‑1 (MQ=255)

                                                                          cGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGACGGTCCATGGGC‑AAGCACAACGGCGGGAAGAACCGTTTGAACAACCAGCGTACac           >  2:3613420/1‑93 (MQ=255)

                                                                           gACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAAc          <  2:2293903/94‑1 (MQ=255)

                                                                           gACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAAc          >  1:6969631/1‑94 (MQ=255)

                                                                            aCGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt         <  1:6728040/94‑1 (MQ=255)

                                                                            aCGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt         <  2:2170407/94‑1 (MQ=255)

                                                                            aCGGGTTATCGG‑AGCCGCCGCTCAATTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt         >  2:499277/1‑94 (MQ=255)

                                                                             cGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACtt        >  2:7594243/1‑94 (MQ=255)

                                                                              gggTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTc       <  1:87220/94‑1 (MQ=255)

                                                                               ggTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc      <  2:9027037/94‑1 (MQ=255)

                                                                               ggTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc      <  1:1254363/94‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCg     <  2:1893852/94‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCg     <  1:8107985/94‑1 (MQ=255)

                                                                                 ttATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg    <  1:982244/94‑1 (MQ=255)

                                                                                 ttATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg    <  1:3854975/94‑1 (MQ=255)

                                                                                 ttATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg    <  1:2123287/94‑1 (MQ=255)

                                                                                  tATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgc   >  2:697611/1‑94 (MQ=255)

                                                                                   aTCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgcg  >  2:6237101/1‑94 (MQ=255)

GTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCG‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC‑GCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCG  >  NC_000913/3554025‑3554200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 266 total aligned reads displayed.

GTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCG‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAGC  >  NC_000913/3554025‑3554211

GTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCG‑C                                                                                               >  SRR4302545.8630616/1‑94 (MQ=60)

GTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCG‑C                                                                                               >  SRR4302545.483264/1‑94 (MQ=60)

      TGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGTCGCCGACGGGTTATCGGT‑GCCGCCGCTCA                                                                                          <  SRR4302545.78316/94‑1 (MQ=60)

      TGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCA                                                                                          <  SRR4302545.1884305/94‑1 (MQ=60)

      TGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCA                                                                                          <  SRR4302545.3173810/94‑1 (MQ=60)

      TGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCA                                                                                          >  SRR4302545.287480/1‑94 (MQ=60)

       GCTGATGACTTCCTATTGTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAC                                                                                         <  SRR4302545.4223766/94‑1 (MQ=60)

       GCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAC                                                                                         >  SRR4302545.3390237/1‑94 (MQ=60)

       GCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAC                                                                                         >  SRR4302545.3918699/1‑94 (MQ=60)

       GCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGACGACGGGTTATCGGT‑GCCGCCGCTCAC                                                                                         >  SRR4302545.5470471/1‑94 (MQ=60)

        CTGATGAATTCCTATTTTCGCCAGCCGCGGCTCCAGCACCCCGCGGATAAAATCAGCAGGAGGCGCCGACGGGCTATCGGTGCCGG‑CGCTCACT                                                                                        >  SRR4302545.9506634/1‑94 (MQ=50)

        CTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACT                                                                                        >  SRR4302545.9506633/1‑94 (MQ=60)

         TGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTT                                                                                       >  SRR4302545.311541/1‑94 (MQ=60)

         TGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTT                                                                                       >  SRR4302545.10271692/1‑94 (MQ=60)

           ATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCA                                                                                     >  SRR4302545.504841/1‑94 (MQ=60)

           ATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCA                                                                                     >  SRR4302545.3189744/1‑94 (MQ=60)

           ATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCA                                                                                     >  SRR4302545.9921487/1‑94 (MQ=60)

           ATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCA                                                                                     >  SRR4302545.3837948/1‑94 (MQ=60)

           ATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATACGCAGGAGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCA                                                                                     >  SRR4302545.3653368/1‑94 (MQ=60)

           ATCAATCCCTATTTGCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTCCA                                                                                     <  SRR4302545.7721868/94‑1 (MQ=60)

            TGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAA                                                                                    >  SRR4302545.5021849/1‑94 (MQ=60)

            TGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAA                                                                                    >  SRR4302545.6829661/1‑94 (MQ=60)

             TAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAAC                                                                                   <  SRR4302545.10653306/94‑1 (MQ=60)

             GAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCCCTTCAAC                                                                                   >  SRR4302545.2635652/1‑94 (MQ=60)

             GAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAAC                                                                                   >  SRR4302545.1260437/1‑94 (MQ=60)

             GAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAAC                                                                                   >  SRR4302545.10123709/1‑94 (MQ=60)

              AATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGGTATCGGT‑GCCGCCGCTCACTTCAACA                                                                                  >  SRR4302545.4351215/1‑94 (MQ=60)

              AATTCCTATTTGCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACA                                                                                  <  SRR4302545.3006932/94‑1 (MQ=60)

              AATGCCTAGTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACA                                                                                  <  SRR4302545.1906735/94‑1 (MQ=60)

               ATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAC                                                                                 >  SRR4302545.6217197/1‑94 (MQ=60)

               ATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAC                                                                                 >  SRR4302545.5628128/1‑94 (MQ=60)

               ATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGACGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAC                                                                                 >  SRR4302545.7836383/1‑94 (MQ=60)

                gtaCTATTTTCGCCAGCAGCGTCTTCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACG                                                                                <  SRR4302545.10257104/91‑1 (MQ=60)

                TTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACG                                                                                <  SRR4302545.5868119/94‑1 (MQ=60)

                 TCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGC                                                                               >  SRR4302545.10388657/1‑94 (MQ=60)

                  CCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCG                                                                              >  SRR4302545.4659324/1‑94 (MQ=60)

                    TATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAA                                                                            <  SRR4302545.2732500/94‑1 (MQ=60)

                     ATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCTCTTCCACACGCGAAG                                                                           >  SRR4302545.6239270/1‑94 (MQ=60)

                     ATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAG                                                                           <  SRR4302545.1533250/94‑1 (MQ=60)

                     ATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAG                                                                           <  SRR4302545.7695675/94‑1 (MQ=60)

                      TTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGG                                                                          >  SRR4302545.7372443/1‑94 (MQ=60)

                       TTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGT                                                                         >  SRR4302545.4926558/1‑94 (MQ=60)

                        TTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTC                                                                        <  SRR4302545.2237799/94‑1 (MQ=60)

                         TCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCC                                                                       <  SRR4302545.1449077/94‑1 (MQ=60)

                         TCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCC                                                                       <  SRR4302545.4911565/94‑1 (MQ=60)

                          CGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCA                                                                      >  SRR4302545.7319466/1‑94 (MQ=60)

                          CGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCA                                                                      <  SRR4302545.6274913/94‑1 (MQ=60)

                          CGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCA                                                                      >  SRR4302545.326069/1‑94 (MQ=60)

                           GCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCAT                                                                     >  SRR4302545.2874793/1‑94 (MQ=60)

                            CCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATC                                                                    <  SRR4302545.17601/94‑1 (MQ=60)

                            CCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATC                                                                    <  SRR4302545.3475224/94‑1 (MQ=60)

                            CCAGCAGCGGCTCCAGCACCCGGAGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATC                                                                    <  SRR4302545.6032384/94‑1 (MQ=60)

                             CAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGACGGTCCATCG                                                                   >  SRR4302545.5854882/1‑94 (MQ=60)

                             CAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCG                                                                   <  SRR4302545.2091552/94‑1 (MQ=60)

                             CAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCG                                                                   <  SRR4302545.9104629/94‑1 (MQ=60)

                             CAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCG                                                                   >  SRR4302545.7555766/1‑94 (MQ=60)

                             CAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCG                                                                   <  SRR4302545.1592677/94‑1 (MQ=60)

                              CGCAGCGGCTCCAGCACCCGGCGAATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGTTCACTTCAACACGCGAAGGTCCATCGG                                                                  <  SRR4302545.7821719/94‑1 (MQ=60)

                              AGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGACGGTCCATCGG                                                                  >  SRR4302545.4101192/1‑94 (MQ=60)

                              AGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGG                                                                  >  SRR4302545.4553280/1‑94 (MQ=60)

                              AGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGG                                                                  <  SRR4302545.1426922/94‑1 (MQ=60)

                              AGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGG                                                                  >  SRR4302545.2030424/1‑94 (MQ=60)

                              AGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGG                                                                  >  SRR4302545.4945835/1‑94 (MQ=60)

                              AGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGG                                                                  >  SRR4302545.2509876/1‑94 (MQ=60)

                                CAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCA                                                                >  SRR4302545.8142042/1‑94 (MQ=60)

                                 AGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAA                                                               >  SRR4302545.9062566/1‑94 (MQ=60)

                                  GCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGCAGGTCCATCGGCAAA                                                              >  SRR4302545.7168435/1‑94 (MQ=60)

                                   TGGCTCCAGCACCCGGCGCATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAC                                                             >  SRR4302545.5451483/1‑94 (MQ=60)

                                   CGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCCAAC                                                             >  SRR4302545.9077342/1‑94 (MQ=60)

                                   CGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAC                                                             <  SRR4302545.7533661/94‑1 (MQ=60)

                                   CGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAC                                                             <  SRR4302545.9361819/94‑1 (MQ=60)

                                   CGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAC                                                             <  SRR4302545.10402070/94‑1 (MQ=60)

                                   CGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAC                                                             <  SRR4302545.3436137/94‑1 (MQ=60)

                                    GGCTCCAGCACCCGGCGGATAAAATCCGCAGGAGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACC                                                            >  SRR4302545.9173516/1‑94 (MQ=60)

                                     GCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCA                                                           <  SRR4302545.7901219/94‑1 (MQ=60)

                                     GCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGCTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCC                                                           >  SRR4302545.4623498/1‑94 (MQ=60)

                                      CTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAACAC                                                          >  SRR4302545.9352845/1‑94 (MQ=60)

                                       ccccGCACCCCGCGGATAAAATCCGCAGGCGGCGCCGGCGGCTTTTCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCACACCACA                                                         <  SRR4302545.5791984/90‑1 (MQ=39)

                                       TCCAGCTCCCTGCGGATAAAATCCGCAGCCGCCGCCGGCGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACA                                                         <  SRR4302545.6329939/94‑1 (MQ=46)

                                       TCCAGCACCCGCCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGACCATCGGCAAACCACA                                                         >  SRR4302545.162537/1‑94 (MQ=60)

                                        CCAGCCCCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAG                                                        <  SRR4302545.1225739/94‑1 (MQ=60)

                                        CCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAG                                                        <  SRR4302545.589642/94‑1 (MQ=60)

                                        CCAGACCCCGGCGGATAAAATCCGCAGGCGGCGCCTACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAG                                                        <  SRR4302545.3677050/94‑1 (MQ=60)

                                         CAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC                                                       >  SRR4302545.6310366/1‑94 (MQ=60)

                                         CAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC                                                       <  SRR4302545.10816089/94‑1 (MQ=60)

                                         CAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC                                                       <  SRR4302545.4438450/94‑1 (MQ=60)

                                         CAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC                                                       >  SRR4302545.1706775/1‑94 (MQ=60)

                                         CAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC                                                       <  SRR4302545.3029367/94‑1 (MQ=60)

                                         CAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGC                                                       <  SRR4302545.2262491/94‑1 (MQ=60)

                                          AGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCG                                                      >  SRR4302545.6245482/1‑94 (MQ=60)

                                           GCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGC                                                     <  SRR4302545.1880685/94‑1 (MQ=60)

                                           GCACCCGGCGGATAAAATCCGCAGGAGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGC                                                     >  SRR4302545.2657184/1‑94 (MQ=60)

                                            TACCCGGCGGTTAAAATCCGCAGGCGGCGCCGACGGGTTATCGG‑GGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCG                                                    >  SRR4302545.8311157/1‑94 (MQ=60)

                                            CCCCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCG                                                    <  SRR4302545.3938257/94‑1 (MQ=60)

                                            CACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCG                                                    >  SRR4302545.2579140/1‑94 (MQ=60)

                                            CACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCG                                                    <  SRR4302545.3288414/94‑1 (MQ=60)

                                            CACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGCTCCATCGGAAAAACACAGCGCG                                                    >  SRR4302545.9021598/1‑94 (MQ=60)

                                              CCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGG                                                  <  SRR4302545.6599323/94‑1 (MQ=60)

                                               CCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGC                                                 <  SRR4302545.688223/94‑1 (MQ=60)

                                               CCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGC                                                 <  SRR4302545.6328866/94‑1 (MQ=60)

                                                CGGCGTATGAAATCCGCAGGCGGCGCCGACCGGTTATCGGTCCCGC‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCA                                                <  SRR4302545.10028176/94‑1 (MQ=60)

                                                  GCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGC                                              <  SRR4302545.10080117/94‑1 (MQ=60)

                                                   CGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCC                                             >  SRR4302545.3960288/1‑94 (MQ=60)

                                                   CGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCA                                             >  SRR4302545.3527264/1‑94 (MQ=60)

                                                    GGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAC                                            >  SRR4302545.4552245/1‑94 (MQ=60)

                                                    GGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAC                                            <  SRR4302545.6725639/94‑1 (MQ=60)

                                                    GGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAC                                            >  SRR4302545.401099/1‑94 (MQ=60)

                                                    GGATAAAACCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAC                                            <  SRR4302545.2101037/94‑1 (MQ=60)

                                                     GATAAAATCCGCAGGCGGCGCGGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACC                                           <  SRR4302545.7219112/94‑1 (MQ=60)

                                                     GATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACC                                           <  SRR4302545.705469/94‑1 (MQ=60)

                                                     GATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACC                                           <  SRR4302545.4218975/94‑1 (MQ=60)

                                                     GATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACC                                           <  SRR4302545.3515385/94‑1 (MQ=60)

                                                      ATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCG                                          >  SRR4302545.8163386/1‑94 (MQ=60)

                                                      ATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCG                                          >  SRR4302545.3152748/1‑94 (MQ=60)

                                                      ATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCG                                          >  SRR4302545.3298480/1‑94 (MQ=60)

                                                      ATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCG                                          >  SRR4302545.4053853/1‑94 (MQ=60)

                                                       TAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGT                                         >  SRR4302545.6170050/1‑94 (MQ=60)

                                                       TAAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGT                                         <  SRR4302545.4458327/94‑1 (MQ=60)

                                                        AAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTT                                        >  SRR4302545.5324140/1‑94 (MQ=60)

                                                        AAAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTT                                        <  SRR4302545.10874028/94‑1 (MQ=60)

                                                         AAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTT                                       <  SRR4302545.2832901/94‑1 (MQ=60)

                                                         AAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTT                                       <  SRR4302545.54403/94‑1 (MQ=60)

                                                         AAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTT                                       <  SRR4302545.8189204/94‑1 (MQ=60)

                                                         AAATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTT                                       >  SRR4302545.419326/1‑94 (MQ=60)

                                                          AATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGTAGCACCGTTTG                                      >  SRR4302545.8322817/1‑94 (MQ=60)

                                                           ATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGC                                     <  SRR4302545.8035384/94‑1 (MQ=60)

                                                           ATCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGC                                     <  SRR4302545.6282594/94‑1 (MQ=60)

                                                            TCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCA                                    <  SRR4302545.10332623/94‑1 (MQ=60)

                                                            TCCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCA                                    >  SRR4302545.5379718/1‑94 (MQ=60)

                                                             CCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAG                                   >  SRR4302545.4871649/1‑94 (MQ=60)

                                                             CCGCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAG                                   <  SRR4302545.10180605/94‑1 (MQ=60)

                                                              cgcagaCGGCGCCGAAGAGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGAACAGTTTGCAGC                                  <  SRR4302545.9699290/88‑1 (MQ=60)

                                                              cgcAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGC                                  >  SRR4302545.3598184/4‑94 (MQ=60)

                                                               gcAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCCCCGTTTGCAGCA                                 >  SRR4302545.5629640/3‑94 (MQ=60)

                                                               gcAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCA                                 <  SRR4302545.6514210/92‑1 (MQ=60)

                                                               gcAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCA                                 >  SRR4302545.6234228/3‑94 (MQ=60)

                                                               C‑AGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACAACAGCGCGGGCAGCACCGTTTGCAGCAC                                >  SRR4302545.2359148/1‑94 (MQ=60)

                                                                cagggGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAC                                <  SRR4302545.8843696/89‑1 (MQ=60)

                                                                 CGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACC                               <  SRR4302545.2455385/94‑1 (MQ=60)

                                                                 AGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACC                               >  SRR4302545.4514944/1‑94 (MQ=60)

                                                                   gcggacccggCGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGCCCATCGGCAAACCACAGCGCGGGCAGCGCCGTTTGCAGCACCAG                             <  SRR4302545.2709570/84‑1 (MQ=60)

                                                                   GCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAG                             >  SRR4302545.2798547/1‑94 (MQ=60)

                                                                   GCGGCGCAGAGGGCTTATCGGT‑GCCGCCGCTCTCTTCAACACGTGAATGTCCATCGGCAAACCACAGCGCGGTCAGCACCGTTTGCAGCACCAG                             <  SRR4302545.2589947/94‑1 (MQ=48)

                                                                      GCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT                          >  SRR4302545.7358520/1‑94 (MQ=60)

                                                                        GCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTAC                        <  SRR4302545.3683776/94‑1 (MQ=60)

                                                                         CCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACA                       >  SRR4302545.4293652/1‑94 (MQ=60)

                                                                         CCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACA                       <  SRR4302545.9878980/94‑1 (MQ=60)

                                                                         CCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACA                       <  SRR4302545.2316634/94‑1 (MQ=60)

                                                                         CCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACA                       >  SRR4302545.9034742/1‑94 (MQ=60)

                                                                          ctgtcggggtatcggtgctgcCGCTCACTTCAACACGCGAAGGTCCATCGGTAAACCACAGCGCGGGCAGCACCGTGTGCAGCACCAGCGTACA                       >  SRR4302545.9675659/22‑94 (MQ=60)

                                                                          CGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAA                      >  SRR4302545.144953/1‑94 (MQ=60)

                                                                          CGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAA                      >  SRR4302545.8846080/1‑94 (MQ=60)

                                                                          CGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAA                      >  SRR4302545.1722204/1‑94 (MQ=60)

                                                                           cgccgggtgatcggtgcctcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAA                      <  SRR4302545.3215756/74‑1 (MQ=60)

                                                                           GACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAAC                     >  SRR4302545.8038728/1‑94 (MQ=60)

                                                                            cgcgtgttatcggtgccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAAC                     <  SRR4302545.720379/75‑1 (MQ=60)

                                                                            ACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACT                    <  SRR4302545.6912487/94‑1 (MQ=60)

                                                                            ACGGATTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACT                    <  SRR4302545.7629688/94‑1 (MQ=60)

                                                                             CGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTT                   <  SRR4302545.7027213/94‑1 (MQ=60)

                                                                              GGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCCCCGTTTGCAGCACCAGCGTACAACTTC                  <  SRR4302545.857543/94‑1 (MQ=60)

                                                                              GGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTC                  <  SRR4302545.9480259/94‑1 (MQ=60)

                                                                              GGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTC                  <  SRR4302545.8871915/94‑1 (MQ=60)

                                                                              GGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTC                  <  SRR4302545.8190027/94‑1 (MQ=60)

                                                                              GGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTC                  <  SRR4302545.89225/94‑1 (MQ=60)

                                                                               GGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCC                 <  SRR4302545.1399523/94‑1 (MQ=60)

                                                                               GGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCC                 <  SRR4302545.1282497/94‑1 (MQ=60)

                                                                               GGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCC                 <  SRR4302545.5235785/94‑1 (MQ=60)

                                                                                GTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCG                <  SRR4302545.1178686/94‑1 (MQ=60)

                                                                                GTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCG                <  SRR4302545.8341850/94‑1 (MQ=60)

                                                                                GTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCG                >  SRR4302545.4586343/1‑94 (MQ=60)

                                                                                 TTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGG               <  SRR4302545.1004128/94‑1 (MQ=60)

                                                                                 TTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGG               <  SRR4302545.1071131/94‑1 (MQ=60)

                                                                                 TTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGG               <  SRR4302545.2175392/94‑1 (MQ=60)

                                                                                 TTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGG               >  SRR4302545.2251636/1‑94 (MQ=60)

                                                                                  TATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGC              <  SRR4302545.59356/94‑1 (MQ=60)

                                                                                   ATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCG             >  SRR4302545.6183871/1‑94 (MQ=60)

                                                                                   ATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCG             >  SRR4302545.4259909/1‑94 (MQ=60)

                                                                                       ggtgccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTA          <  SRR4302545.1772951/86‑1 (MQ=60)

                                                                                       ggtgccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTA          >  SRR4302545.3991664/9‑94 (MQ=60)

                                                                                        gtgccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCTGCGCTAC         >  SRR4302545.6073269/8‑94 (MQ=60)

                                                                                         tgccgcCGCTCTCTTCAACACGCGAAGGCCCATCGGCAAACTGCAGCTCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTTCC        <  SRR4302545.6132448/88‑1 (MQ=60)

                                                                                         tgccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACC        <  SRR4302545.9923587/88‑1 (MQ=60)

                                                                                         tgccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACC        <  SRR4302545.4778321/88‑1 (MQ=60)

                                                                                         ggccgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACC        <  SRR4302545.10731592/88‑1 (MQ=60)

                                                                                          GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCaccaaaaacc       <  SRR4302545.1255736/94‑11 (MQ=60)

                                                                                          GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCG       <  SRR4302545.5949092/94‑1 (MQ=60)

                                                                                           CCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGA      <  SRR4302545.3310894/94‑1 (MQ=60)

                                                                                           CCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGA      <  SRR4302545.1168247/94‑1 (MQ=60)

                                                                                            cgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGAT     >  SRR4302545.1390625/4‑94 (MQ=60)

                                                                                            cgcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGAT     >  SRR4302545.4045725/4‑94 (MQ=60)

                                                                                             gcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATA    >  SRR4302545.5647280/3‑94 (MQ=60)

                                                                                             gcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATA    >  SRR4302545.9453534/3‑94 (MQ=60)

                                                                                             gcCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATA    <  SRR4302545.2808387/92‑1 (MQ=60)

                                                                                             C‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAG   >  SRR4302545.2991314/1‑94 (MQ=60)

                                                                                             C‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAG   <  SRR4302545.10870456/94‑1 (MQ=60)

                                                                                             C‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAG   >  SRR4302545.6031450/1‑94 (MQ=60)

                                                                                             C‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAG   >  SRR4302545.7119648/1‑94 (MQ=60)

                                                                                               CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAGC  >  SRR4302545.2449759/1‑94 (MQ=60)

                                                                                               CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAGC  >  SRR4302545.2818189/1‑94 (MQ=60)

                                                                                               CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAGC  >  SRR4302545.9906041/1‑94 (MQ=60)

GTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCG‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCTACCGATAGC  >  NC_000913/3554025‑3554211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`