Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,558,932 2 bp→GC coding (153‑154/831 nt) glpG ← GlpG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,558,9320CG100.0% 1829.7 / NA 536V52L (GTG→CTG) glpGGlpG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (263/273);  total (263/273)
*NC_0009133,558,9330GC100.0% 1826.5 / NA 537D51E (GAC→GAG) glpGGlpG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (263/274);  total (263/274)

Only 100 of 558 total aligned reads displayed.

CGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCACGTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGC  >  NC_000913/3558844‑3559020
                                                                                        ||                                                                                       
 gATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGc                                                                                    >  2:2075841/1‑94 (MQ=255)
  aTAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGcc                                                                                   <  2:2414849/94‑1 (MQ=255)
   tAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGccc                                                                                  >  1:3341339/1‑94 (MQ=255)
    aaTGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCg                                                                                 >  2:1393881/1‑94 (MQ=255)
    aaTGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCg                                                                                 >  2:9345651/1‑94 (MQ=255)
      tGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTa                                                                               >  1:7446112/1‑94 (MQ=255)
        cAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATGTGCCGGGCTTTCGGGAAAACGGGCCAGCTCCGCCCGTAcg                                                                             >  2:3581319/1‑94 (MQ=255)
        cAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTAcg                                                                             >  1:4941506/1‑94 (MQ=255)
            ccACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCt                                                                         >  2:7642449/1‑94 (MQ=255)
             cgcTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTc                                                                        <  1:8068954/92‑1 (MQ=255)
             cACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTc                                                                        >  1:5097511/1‑94 (MQ=255)
             cACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTc                                                                        >  2:6076948/1‑94 (MQ=255)
              aCTGCGGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCg                                                                       <  2:4963113/94‑1 (MQ=255)
              aCTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCg                                                                       >  2:800043/1‑94 (MQ=255)
              aCTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCg                                                                       <  1:4108850/94‑1 (MQ=255)
               cTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCgg                                                                      <  2:5101429/94‑1 (MQ=255)
                tGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGc                                                                     >  1:10013346/1‑94 (MQ=255)
                tGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGc                                                                     >  1:1808106/1‑94 (MQ=255)
                  ccGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCt                                                                   >  2:5268922/1‑94 (MQ=255)
                  ccGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCt                                                                   <  1:9621977/94‑1 (MQ=255)
                   cGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTg                                                                  >  2:7539754/1‑94 (MQ=255)
                   cGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTg                                                                  >  1:642116/1‑94 (MQ=255)
                    ggTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGGTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTgg                                                                 >  2:1112272/1‑94 (MQ=255)
                     gTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTggg                                                                <  2:5759721/94‑1 (MQ=255)
                     gTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTggg                                                                <  1:8592646/94‑1 (MQ=255)
                       aTGTCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGAc                                                              <  1:5553235/94‑1 (MQ=255)
                       aTGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGAc                                                              <  2:6121214/94‑1 (MQ=255)
                        tGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACt                                                             >  1:10298661/1‑94 (MQ=255)
                         ggCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTc                                                            >  2:6612502/1‑94 (MQ=255)
                          gcctgcctGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCa                                                           >  1:8404430/1‑94 (MQ=255)
                           cctgcctgCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCAt                                                          <  2:10516673/94‑1 (MQ=255)
                            ctgcctgcCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATc                                                         <  2:2908663/94‑1 (MQ=255)
                            ctgcctgcCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCACGTACGCGCTCGGCCTGGGACTCATc                                                         >  2:4600588/1‑94 (MQ=255)
                             tgcctgccAGCGCGCCGCCAGATAACGCTGATCTGCCGGGTTTTCGAGAAACCGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATcc                                                        <  2:5585236/94‑1 (MQ=255)
                               cctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgc                                                      >  2:5880093/1‑94 (MQ=255)
                                ctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgcc                                                     <  2:4495717/94‑1 (MQ=255)
                                ctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgcc                                                     >  2:3350103/1‑94 (MQ=255)
                                 tgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgcca                                                    >  1:922633/1‑94 (MQ=255)
                                  gccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccag                                                   >  1:7173465/1‑94 (MQ=255)
                                  gccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccag                                                   >  2:7112968/1‑94 (MQ=255)
                                  gccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccag                                                   >  2:6288301/1‑94 (MQ=255)
                                    cAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagcc                                                 >  2:8682025/1‑94 (MQ=255)
                                     aGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagcca                                                >  1:1409385/1‑94 (MQ=255)
                                      gCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGccagccag                                               >  1:689837/1‑94 (MQ=255)
                                         cgccgcCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACa                                            >  1:6277283/1‑94 (MQ=255)
                                           ccgccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATc                                          >  1:2368428/1‑94 (MQ=255)
                                            cgccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCg                                         <  1:4532525/94‑1 (MQ=255)
                                            cgccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCg                                         <  2:10092603/94‑1 (MQ=255)
                                             gccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGc                                        >  2:189114/1‑94 (MQ=255)
                                              ccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCt                                       <  2:7782344/94‑1 (MQ=255)
                                               cAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCtt                                      <  1:1266091/94‑1 (MQ=255)
                                                aGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCttt                                     <  2:3168049/94‑1 (MQ=255)
                                                aGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCttt                                     >  1:3941439/1‑94 (MQ=255)
                                                 gATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTg                                    <  1:7574918/94‑1 (MQ=255)
                                                 gATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTg                                    <  1:7813716/94‑1 (MQ=255)
                                                  aTAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTgg                                   >  1:8734679/1‑94 (MQ=255)
                                                   tAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGt                                  <  2:4271396/94‑1 (MQ=255)
                                                   tAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGt                                  <  2:741637/94‑1 (MQ=255)
                                                    aaCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGtt                                 >  2:2232367/1‑94 (MQ=255)
                                                    aaCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGtt                                 <  1:6611791/94‑1 (MQ=255)
                                                    aaCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGtt                                 >  2:4170614/1‑94 (MQ=255)
                                                     aCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTa                                >  1:9688618/1‑94 (MQ=255)
                                                     aCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTa                                <  1:8930164/94‑1 (MQ=255)
                                                      cgcgGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAt                               >  2:4037008/1‑94 (MQ=255)
                                                       gcgGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtg                              <  1:2827081/94‑1 (MQ=255)
                                                         ggATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgtt                            >  1:9795261/1‑94 (MQ=255)
                                                          gagcTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgttg                           <  2:6964059/91‑1 (MQ=255)
                                                          gATCTGCGGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgttg                           <  2:8389327/94‑1 (MQ=255)
                                                          gATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgttg                           <  1:9440896/94‑1 (MQ=255)
                                                          gATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgttg                           <  1:3439114/94‑1 (MQ=255)
                                                            tCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATgttgtt                         <  1:3173799/94‑1 (MQ=255)
                                                            tCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATgttgtt                         >  1:9114088/1‑94 (MQ=255)
                                                             cTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGttgttg                        >  2:2527614/1‑94 (MQ=255)
                                                             cTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGttgttg                        <  1:3695558/94‑1 (MQ=255)
                                                              tGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGa                       <  2:9026658/94‑1 (MQ=255)
                                                                ccGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAAt                     <  2:3472946/94‑1 (MQ=255)
                                                                ccGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAAt                     <  2:1981471/94‑1 (MQ=255)
                                                                ccGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGATATGTTGTTGAAt                     >  1:5922337/1‑94 (MQ=255)
                                                                 cGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATTTTGTTGAATc                    >  2:9766247/1‑94 (MQ=255)
                                                                 cGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATc                    <  2:9123122/94‑1 (MQ=255)
                                                                 cGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATc                    <  2:1037956/94‑1 (MQ=255)
                                                                  gggTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCg                   <  1:2940650/94‑1 (MQ=255)
                                                                  gggTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCg                   >  1:10519115/1‑94 (MQ=255)
                                                                  gggTTTTCCAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGTTTTGGTTATGTTGTTGAATCg                   <  2:3719534/94‑1 (MQ=255)
                                                                   ggTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGt                  <  1:1099823/94‑1 (MQ=255)
                                                                      tttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAg               <  2:1694906/94‑1 (MQ=255)
                                                                      tttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAg               <  1:442665/94‑1 (MQ=255)
                                                                       ttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAgg              <  1:2653572/94‑1 (MQ=255)
                                                                       ttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAgg              <  2:947402/94‑1 (MQ=255)
                                                                        tCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGa             >  1:7915597/1‑94 (MQ=255)
                                                                         cGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGAt            >  1:5773530/1‑94 (MQ=255)
                                                                          gagaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATa           >  1:2152622/1‑94 (MQ=255)
                                                                          gagaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATa           >  2:2685913/1‑94 (MQ=255)
                                                                           agaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATaa          <  2:728853/94‑1 (MQ=255)
                                                                           agaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATaa          >  2:386021/1‑94 (MQ=255)
                                                                            gaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAac         >  2:6534313/1‑94 (MQ=255)
                                                                            gaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAac         >  1:2496998/1‑94 (MQ=255)
                                                                             aaaaCGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAaca        >  1:152800/1‑94 (MQ=255)
                                                                                  gcgcCAGCTCCGCCCTTAGGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTg   <  1:3251438/94‑1 (MQ=255)
                                                                                   cgcCAGCTCCGCCCGTACGCGCTCGGCCTGGGACACATCCGCCAGCCAGCCATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGc  <  2:5442414/94‑1 (MQ=255)
                                                                                        ||                                                                                       
CGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCACGTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGC  >  NC_000913/3558844‑3559020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 386 total aligned reads displayed.
AAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGA  >  NC_000913/3561319‑3561505
                                                                                             |                                                                                             
AAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCG                                                                                               <  SRR4302545.2651303/94‑1 (MQ=60)
AAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCG                                                                                               >  SRR4302545.8915616/1‑94 (MQ=60)
AAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGCAACAAAACTCAGGCG                                                                                               <  SRR4302545.3127612/94‑1 (MQ=60)
 AAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGC                                                                                              <  SRR4302545.546266/94‑1 (MQ=60)
 AAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGC                                                                                              <  SRR4302545.7828399/94‑1 (MQ=60)
 AAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGC                                                                                              >  SRR4302545.7351973/1‑94 (MQ=60)
  AGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCG                                                                                             <  SRR4302545.5129805/94‑1 (MQ=60)
   GCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGT                                                                                            <  SRR4302545.6295915/94‑1 (MQ=60)
     GCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTC                                                                                          <  SRR4302545.1348899/94‑1 (MQ=60)
     GCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTC                                                                                          >  SRR4302545.7525828/1‑94 (MQ=60)
     GCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTC                                                                                          <  SRR4302545.3929676/94‑1 (MQ=60)
     GCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTC                                                                                          >  SRR4302545.8628166/1‑94 (MQ=60)
      CACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCC                                                                                         <  SRR4302545.6760935/94‑1 (MQ=60)
      CACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCC                                                                                         >  SRR4302545.8166090/1‑94 (MQ=60)
      CACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCC                                                                                         <  SRR4302545.3876730/94‑1 (MQ=60)
      CACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCA                                                                                         <  SRR4302545.5222383/94‑1 (MQ=60)
       ACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCC                                                                                        <  SRR4302545.7454964/94‑1 (MQ=60)
       ACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCC                                                                                        >  SRR4302545.3214186/1‑94 (MQ=60)
        CTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCC                                                                                       >  SRR4302545.2722492/1‑94 (MQ=60)
        CTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCC                                                                                       >  SRR4302545.3288226/1‑94 (MQ=60)
        CTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCC                                                                                       <  SRR4302545.5315977/94‑1 (MQ=60)
         TTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCA                                                                                      <  SRR4302545.9911911/94‑1 (MQ=60)
         TTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCA                                                                                      >  SRR4302545.4233144/1‑94 (MQ=60)
         TTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCA                                                                                      <  SRR4302545.9045493/94‑1 (MQ=60)
          TTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCAC                                                                                     <  SRR4302545.2253139/94‑1 (MQ=60)
          TTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGCAACAAAACTCAGGCGCGTTCCCCAC                                                                                     >  SRR4302545.7627831/1‑94 (MQ=60)
          TTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATAACCAACGTAACAACACTCAGGCGAGTTCCCCAC                                                                                     >  SRR4302545.2049342/1‑94 (MQ=60)
           TGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACT                                                                                    >  SRR4302545.9656359/1‑94 (MQ=60)
            GTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTC                                                                                   <  SRR4302545.2225046/94‑1 (MQ=60)
            GTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTC                                                                                   >  SRR4302545.3017453/1‑94 (MQ=60)
             TCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCG                                                                                  <  SRR4302545.7196058/94‑1 (MQ=60)
              CAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGC                                                                                 >  SRR4302545.1637197/1‑94 (MQ=60)
               AAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCTAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCC                                                                                <  SRR4302545.1870842/94‑1 (MQ=60)
                 AAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCC                                                                              <  SRR4302545.8268781/94‑1 (MQ=60)
                  AATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCG                                                                             <  SRR4302545.8075576/94‑1 (MQ=60)
                  AATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCG                                                                             <  SRR4302545.8015314/94‑1 (MQ=60)
                  AATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCG                                                                             <  SRR4302545.396479/94‑1 (MQ=60)
                  AATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCG                                                                             <  SRR4302545.10074855/94‑1 (MQ=60)
                  AATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCG                                                                             <  SRR4302545.10552542/94‑1 (MQ=60)
                   ATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGA                                                                            <  SRR4302545.4948264/94‑1 (MQ=60)
                   ATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGA                                                                            >  SRR4302545.8666255/1‑94 (MQ=60)
                   ATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGA                                                                            >  SRR4302545.4264923/1‑94 (MQ=60)
                     CTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGA                                                                          >  SRR4302545.2661491/1‑94 (MQ=60)
                     CTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGA                                                                          <  SRR4302545.6764655/94‑1 (MQ=60)
                     CTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGA                                                                          >  SRR4302545.6483019/1‑94 (MQ=60)
                     CTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGACA                                                                          >  SRR4302545.4010699/1‑94 (MQ=60)
                      TAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAA                                                                         >  SRR4302545.8176259/1‑94 (MQ=60)
                      TAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAA                                                                         >  SRR4302545.7819405/1‑94 (MQ=60)
                      TAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAA                                                                         <  SRR4302545.7667099/94‑1 (MQ=60)
                       AACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAA                                                                        >  SRR4302545.5895221/1‑94 (MQ=60)
                       AACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAA                                                                        <  SRR4302545.1471013/94‑1 (MQ=60)
                         CCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATCCCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAA                                                                      <  SRR4302545.929904/94‑1 (MQ=60)
                         CCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAA                                                                      <  SRR4302545.4458742/94‑1 (MQ=60)
                          CTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAAT                                                                     >  SRR4302545.6710619/1‑94 (MQ=60)
                           TACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATA                                                                    <  SRR4302545.5638900/94‑1 (MQ=60)
                            ACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAG                                                                   >  SRR4302545.9407562/1‑94 (MQ=60)
                             ATTTTTAATTCAGGGAATTACCGCAAATCCCACGCCTTCATCCCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGC                                                                  <  SRR4302545.2554620/94‑1 (MQ=60)
                              TTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCTACTCGCCCCGAGAAAAATAGCA                                                                 >  SRR4302545.4810566/1‑94 (MQ=60)
                              TTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCA                                                                 <  SRR4302545.3780433/94‑1 (MQ=60)
                              TTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCA                                                                 >  SRR4302545.9188291/1‑94 (MQ=60)
                               TTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCAT                                                                >  SRR4302545.7297760/1‑94 (MQ=60)
                                TTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGCGAAAAATAGCATT                                                               >  SRR4302545.2093347/1‑94 (MQ=60)
                                TTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATT                                                               >  SRR4302545.9717293/1‑94 (MQ=60)
                                TTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATT                                                               >  SRR4302545.4170098/1‑94 (MQ=60)
                                TTTAATTCAGGGAAGTACCGCAAAGCCCACGCCATCATCCCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATT                                                               <  SRR4302545.4136494/94‑1 (MQ=60)
                                 TTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTA                                                              >  SRR4302545.3351245/1‑94 (MQ=60)
                                 TTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTA                                                              >  SRR4302545.6013352/1‑94 (MQ=60)
                                  TAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAATCTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAA                                                             <  SRR4302545.6301973/94‑1 (MQ=60)
                                  TAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAA                                                             >  SRR4302545.10106196/1‑94 (MQ=60)
                                  TAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAA                                                             >  SRR4302545.1144614/1‑94 (MQ=60)
                                   AATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAAT                                                            <  SRR4302545.6834531/94‑1 (MQ=60)
                                   AATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAAT                                                            >  SRR4302545.507702/1‑94 (MQ=60)
                                    GTTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATG                                                           >  SRR4302545.6190722/1‑94 (MQ=60)
                                    ATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATG                                                           >  SRR4302545.1218643/1‑94 (MQ=60)
                                    ATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATG                                                           >  SRR4302545.161359/1‑94 (MQ=60)
                                     TTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGC                                                          >  SRR4302545.1288531/1‑94 (MQ=60)
                                     TTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGC                                                          >  SRR4302545.1116613/1‑94 (MQ=60)
                                     TTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGC                                                          <  SRR4302545.9349328/94‑1 (MQ=60)
                                     ATCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGC                                                          <  SRR4302545.9248296/94‑1 (MQ=60)
                                      TCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCG                                                         >  SRR4302545.6452690/1‑94 (MQ=60)
                                      TCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCG                                                         >  SRR4302545.10204354/1‑94 (MQ=60)
                                      TCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCG                                                         >  SRR4302545.5386246/1‑94 (MQ=60)
                                       CAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGC                                                        >  SRR4302545.10769626/1‑94 (MQ=60)
                                       CAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGC                                                        >  SRR4302545.3590097/1‑94 (MQ=60)
                                        AGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGatcagagatcgg                                                       >  SRR4302545.5486210/1‑82 (MQ=60)
                                        AGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCC                                                       >  SRR4302545.3089046/1‑94 (MQ=60)
                                        AGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCC                                                       <  SRR4302545.3545874/94‑1 (MQ=60)
                                         GGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCC                                                      >  SRR4302545.3009264/1‑94 (MQ=60)
                                          GGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCA                                                     <  SRR4302545.5298512/94‑1 (MQ=60)
                                          GGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCA                                                     >  SRR4302545.5678174/1‑94 (MQ=60)
                                          GGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCA                                                     <  SRR4302545.4711099/94‑1 (MQ=60)
                                           GAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAG                                                    >  SRR4302545.9546482/1‑94 (MQ=60)
                                           GAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAG                                                    <  SRR4302545.8968103/94‑1 (MQ=60)
                                           GAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACACGCCCCGAGAAAAATAGCATTAATGCGCCCAG                                                    <  SRR4302545.4110302/94‑1 (MQ=60)
                                            AATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGC                                                   >  SRR4302545.10530948/1‑94 (MQ=60)
                                            AATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGC                                                   >  SRR4302545.5590504/1‑94 (MQ=60)
                                             ATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCG                                                  >  SRR4302545.10007586/1‑94 (MQ=60)
                                              TTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGC                                                 >  SRR4302545.2168280/1‑94 (MQ=60)
                                               TACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCC                                                >  SRR4302545.8512321/1‑94 (MQ=60)
                                               TACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCC                                                >  SRR4302545.7929076/1‑94 (MQ=60)
                                                ACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCA                                               >  SRR4302545.5205268/1‑94 (MQ=60)
                                                ACCGCAAAGCCCACGCCATCATAACCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCA                                               <  SRR4302545.6057500/94‑1 (MQ=60)
                                                 CCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAG                                              >  SRR4302545.2986362/1‑94 (MQ=60)
                                                  CGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGC                                             <  SRR4302545.10620410/94‑1 (MQ=60)
                                                  CGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGC                                             <  SRR4302545.145224/94‑1 (MQ=60)
                                                   GCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCA                                            >  SRR4302545.5939305/1‑94 (MQ=60)
                                                   GCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAACAGCATTAATGCGCCCAGCGCCAGCA                                            >  SRR4302545.3949927/1‑94 (MQ=60)
                                                    CAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCAT                                           <  SRR4302545.6941762/94‑1 (MQ=60)
                                                    CAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCAT                                           >  SRR4302545.7168256/1‑94 (MQ=60)
                                                    CAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCAT                                           >  SRR4302545.7303955/1‑94 (MQ=60)
                                                    CAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCAT                                           <  SRR4302545.9623508/94‑1 (MQ=60)
                                                     AAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATA                                          >  SRR4302545.5569848/1‑94 (MQ=60)
                                                     AAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATA                                          <  SRR4302545.4520357/94‑1 (MQ=60)
                                                     AAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATA                                          >  SRR4302545.5569849/1‑94 (MQ=60)
                                                      AAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAA                                         >  SRR4302545.843000/1‑94 (MQ=60)
                                                       AGCGCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAA                                        <  SRR4302545.10692914/94‑1 (MQ=60)
                                                       AGCCCACGCCATCATCCCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAA                                        <  SRR4302545.7912220/94‑1 (MQ=60)
                                                       AGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAA                                        <  SRR4302545.8176169/94‑1 (MQ=60)
                                                        GCCCACGCCATCATACCCAACGTCACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAA                                       <  SRR4302545.5964517/94‑1 (MQ=60)
                                                        GCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAA                                       <  SRR4302545.3619503/94‑1 (MQ=60)
                                                        GCCCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAA                                       <  SRR4302545.1314064/94‑1 (MQ=60)
                                                          CCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAAT                                     >  SRR4302545.9730912/1‑94 (MQ=60)
                                                          CCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAAT                                     >  SRR4302545.9802985/1‑94 (MQ=60)
                                                          CCACGCCATCATACCCAACGTAACAAAACTCAGGCGCGCTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAAT                                     >  SRR4302545.1155528/1‑94 (MQ=60)
                                                           CACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATT                                    >  SRR4302545.5349641/1‑94 (MQ=60)
                                                           CACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATT                                    >  SRR4302545.481608/1‑94 (MQ=60)
                                                           CACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATT                                    <  SRR4302545.4144175/94‑1 (MQ=60)
                                                           CACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATT                                    >  SRR4302545.1677228/1‑94 (MQ=60)
                                                           CACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATT                                    <  SRR4302545.1645683/94‑1 (MQ=60)
                                                            ACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTT                                   >  SRR4302545.2333989/1‑94 (MQ=60)
                                                            ACGCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTT                                   <  SRR4302545.6682142/94‑1 (MQ=60)
                                                              GCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTG                                 <  SRR4302545.3741395/94‑1 (MQ=60)
                                                              GCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTG                                 >  SRR4302545.201161/1‑94 (MQ=60)
                                                              GCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTG                                 <  SRR4302545.8191093/94‑1 (MQ=60)
                                                              GCCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTG                                 >  SRR4302545.4129813/1‑94 (MQ=60)
                                                               CCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGA                                <  SRR4302545.1360619/94‑1 (MQ=60)
                                                               CCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGA                                <  SRR4302545.8645952/94‑1 (MQ=60)
                                                               CCATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGA                                <  SRR4302545.7697139/94‑1 (MQ=60)
                                                                CATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAG                               <  SRR4302545.8712288/94‑1 (MQ=60)
                                                                CATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAG                               >  SRR4302545.7362218/1‑94 (MQ=60)
                                                                CATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAG                               <  SRR4302545.7370985/94‑1 (MQ=60)
                                                                 ATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGCAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGC                              >  SRR4302545.2964399/1‑94 (MQ=60)
                                                                 ATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGC                              >  SRR4302545.2684308/1‑94 (MQ=60)
                                                                 ATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGC                              >  SRR4302545.1822475/1‑94 (MQ=60)
                                                                 ATCATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGC                              >  SRR4302545.1519950/1‑94 (MQ=60)
                                                                  TCATACCCAACGTAACAAAACTCAGGCGCGTTCCCTACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCA                             <  SRR4302545.6402316/94‑1 (MQ=60)
                                                                   CATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAG                            <  SRR4302545.8106353/94‑1 (MQ=60)
                                                                   CATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAG                            <  SRR4302545.7958580/94‑1 (MQ=60)
                                                                    ATACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGA                           >  SRR4302545.797832/1‑94 (MQ=60)
                                                                     TACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAA                          <  SRR4302545.6133316/94‑1 (MQ=60)
                                                                     TACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAA                          <  SRR4302545.4398836/94‑1 (MQ=60)
                                                                      ACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAG                         <  SRR4302545.3640144/94‑1 (MQ=60)
                                                                      ACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAG                         <  SRR4302545.2212748/94‑1 (MQ=60)
                                                                      ACCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAG                         <  SRR4302545.7255786/94‑1 (MQ=60)
                                                                      ACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAG                         <  SRR4302545.4547102/94‑1 (MQ=60)
                                                                       CCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGG                        <  SRR4302545.8750880/94‑1 (MQ=60)
                                                                       CCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGG                        <  SRR4302545.2699622/94‑1 (MQ=60)
                                                                       CCCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGG                        <  SRR4302545.8726276/94‑1 (MQ=60)
                                                                        CCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGT                       <  SRR4302545.244659/94‑1 (MQ=60)
                                                                        CCAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGT                       >  SRR4302545.9741092/1‑94 (MQ=60)
                                                                         CAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTA                      <  SRR4302545.6283783/94‑1 (MQ=60)
                                                                         CAACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTA                      >  SRR4302545.5736385/1‑94 (MQ=60)
                                                                          AACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAA                     <  SRR4302545.1732941/94‑1 (MQ=60)
                                                                          AACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAA                     >  SRR4302545.5013223/1‑94 (MQ=60)
                                                                          AACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAA                     <  SRR4302545.1065597/94‑1 (MQ=60)
                                                                          AACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAA                     <  SRR4302545.7081967/94‑1 (MQ=60)
                                                                           ACGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAA                    <  SRR4302545.2915951/94‑1 (MQ=60)
                                                                            CGTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAT                   <  SRR4302545.7351701/94‑1 (MQ=60)
                                                                             GTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATT                  <  SRR4302545.6857647/94‑1 (MQ=60)
                                                                             GTAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATCCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATT                  <  SRR4302545.6434181/94‑1 (MQ=60)
                                                                              TAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTG                 >  SRR4302545.8094561/1‑94 (MQ=60)
                                                                              TAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTG                 <  SRR4302545.9423563/94‑1 (MQ=60)
                                                                              TAACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTG                 <  SRR4302545.6514453/94‑1 (MQ=60)
                                                                               AACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGT                >  SRR4302545.10186670/1‑94 (MQ=60)
                                                                               AACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGT                >  SRR4302545.9036927/1‑94 (MQ=60)
                                                                                ACAAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTT               <  SRR4302545.9148581/94‑1 (MQ=60)
                                                                                  AAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGG             <  SRR4302545.5660292/94‑1 (MQ=60)
                                                                                  AAAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGG             <  SRR4302545.7149660/94‑1 (MQ=60)
                                                                                   AAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGC            >  SRR4302545.4297714/1‑94 (MQ=60)
                                                                                   AAACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGC            >  SRR4302545.10470702/1‑94 (MQ=60)
                                                                                    AACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCG           <  SRR4302545.7789306/94‑1 (MQ=60)
                                                                                    AACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCG           <  SRR4302545.4742908/94‑1 (MQ=60)
                                                                                     ACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCGTTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGT          >  SRR4302545.5795551/1‑94 (MQ=60)
                                                                                     ACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTTAGCAGAAGGTAAATTGTTGGCGT          >  SRR4302545.8278228/1‑94 (MQ=60)
                                                                                     ACTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGT          <  SRR4302545.9280580/94‑1 (MQ=60)
                                                                                      CTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTG         >  SRR4302545.8934024/1‑94 (MQ=60)
                                                                                      CTCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTG         <  SRR4302545.9819671/94‑1 (MQ=60)
                                                                                       TCAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGA        <  SRR4302545.5625862/94‑1 (MQ=60)
                                                                                        CAGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGAT       <  SRR4302545.4534809/94‑1 (MQ=60)
                                                                                         AGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGACGGTAAATTGTTGGCGTGATA      >  SRR4302545.5042683/1‑94 (MQ=60)
                                                                                         AGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATA      <  SRR4302545.8395925/94‑1 (MQ=60)
                                                                                         AGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATA      <  SRR4302545.3300247/94‑1 (MQ=60)
                                                                                         AGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATA      <  SRR4302545.10397613/94‑1 (MQ=60)
                                                                                         AGGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATA      >  SRR4302545.6328555/1‑94 (MQ=60)
                                                                                          GGCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAA     <  SRR4302545.5736670/94‑1 (MQ=60)
                                                                                           GCGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAG    <  SRR4302545.9605913/94‑1 (MQ=60)
                                                                                            CGCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGG   <  SRR4302545.3365236/94‑1 (MQ=60)
                                                                                            CGCGTTCCCCACTCACCCCGAGAAAAATAGCATAAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGG   <  SRR4302545.9944598/94‑1 (MQ=60)
                                                                                             GCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGA  >  SRR4302545.10665351/1‑94 (MQ=60)
                                                                                             GCGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGA  >  SRR4302545.9531627/1‑94 (MQ=60)
                                                                                             |                                                                                             
AAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGA  >  NC_000913/3561319‑3561505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑