Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,700,934	T→C	T182A (ACC→GCC)	dppD ←	putative ATP‑binding component of dipeptide transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,700,934	0	T	C	99.5%	1906.0 / ‑3.0	558	T182A (ACC→GCC)	dppD	putative ATP‑binding component of dipeptide transport system
Reads supporting (aligned to +/- strand): ref base T (0/3); new base C (299/255); total (300/258)
Fisher's exact test for biased strand distribution p-value = 9.88e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 613 total aligned reads displayed.

TGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATG  >  NC_000913/3700843‑3701024

 gggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCggcggt                                                                                         <  1:10310148/94‑1 (MQ=255)

 gggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCggcggt                                                                                         <  1:1889038/94‑1 (MQ=255)

  ggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTc                                                                                        >  2:8038027/1‑94 (MQ=255)

  ggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTc                                                                                        >  2:5039360/1‑94 (MQ=255)

  ggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTc                                                                                        <  1:5356556/94‑1 (MQ=255)

   gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTTCAGCGCGGCGGTCg                                                                                       >  1:9648667/1‑94 (MQ=255)

   gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCg                                                                                       <  2:2439054/94‑1 (MQ=255)

   gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCg                                                                                       >  2:2652841/1‑94 (MQ=255)

   gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCg                                                                                       <  1:49388/94‑1 (MQ=255)

    tAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCgg                                                                                      >  2:6806290/1‑94 (MQ=255)

    tAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCgg                                                                                      >  2:204376/1‑94 (MQ=255)

    tAATTAACACCAGCGCCATGTTCTCTTTCCGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCgg                                                                                      >  1:5695907/1‑94 (MQ=255)

      aTTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGtt                                                                                    <  1:2324881/94‑1 (MQ=255)

      aTTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGtt                                                                                    <  2:7223601/94‑1 (MQ=255)

       ttAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGTGCGGCGGTCGGttt                                                                                   >  1:8456766/1‑93 (MQ=255)

         aaCACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCAt                                                                                 <  1:8641639/94‑1 (MQ=255)

          acacCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATc                                                                                <  1:4287353/94‑1 (MQ=255)

           cacCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATca                                                                               <  1:162696/94‑2 (MQ=255)

             ccAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCgga                                                                             >  2:8149359/1‑93 (MQ=255)

             ccAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGc                                                                             <  2:6406786/94‑1 (MQ=255)

               aGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCaa                                                                           >  2:10117077/1‑94 (MQ=255)

                 cgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATc                                                                         <  1:784651/94‑1 (MQ=255)

                   ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATcag                                                                       >  1:9598351/1‑94 (MQ=255)

                   ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATcag                                                                       >  2:9113673/1‑94 (MQ=255)

                   ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATcag                                                                       >  1:3999627/1‑94 (MQ=255)

                    cATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATcagc                                                                      >  2:6078378/1‑94 (MQ=255)

                    cATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGCCGGTCGGTTCATCGGCAATcagc                                                                      >  1:7552227/1‑94 (MQ=255)

                       gTTCTCTTTCTGCTGTAGCTCCCGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCTGTTCATCGGCAATCAGCAGt                                                                   >  1:7427757/1‑94 (MQ=255)

                       gTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGt                                                                   >  2:7001308/1‑94 (MQ=255)

                        ttCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGTTTCATCGGCAATCAGCAGtt                                                                  <  1:4089685/94‑1 (MQ=255)

                        ttCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGtt                                                                  >  1:1926491/1‑94 (MQ=255)

                         tctcTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGttt                                                                 >  2:2322287/1‑94 (MQ=255)

                           tctTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTg                                                               <  1:6523664/94‑1 (MQ=255)

                           tctTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTg                                                               <  2:198234/94‑1 (MQ=255)

                             tttCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGc                                                             <  2:5252872/94‑1 (MQ=255)

                             tttCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGc                                                             >  1:7139769/1‑94 (MQ=255)

                             tttCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGc                                                             <  1:5505838/94‑1 (MQ=255)

                              ttCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGcc                                                            <  1:9015692/94‑1 (MQ=255)

                                ctgctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGa                                                          >  1:2639741/1‑94 (MQ=255)

                                   ctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAg                                                       <  2:10312111/94‑1 (MQ=255)

                                    tgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAgg                                                      >  1:9913809/1‑94 (MQ=255)

                                    tgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAgg                                                      >  2:1236327/1‑94 (MQ=255)

                                    tgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAgg                                                      >  1:4569830/1‑94 (MQ=255)

                                     gTAGCTACAACAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGc                                                     <  2:2828164/94‑1 (MQ=255)

                                      tAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCa                                                    <  1:2171311/94‑1 (MQ=255)

                                       aGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCaa                                                   <  2:6231497/94‑1 (MQ=255)

                                        gCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt                                                  <  1:7031686/94‑1 (MQ=255)

                                        gCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt                                                  <  1:6675335/94‑1 (MQ=255)

                                        gCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt                                                  <  1:3584220/94‑1 (MQ=255)

                                          tCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCg                                                <  1:683812/94‑1 (MQ=255)

                                          tCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCg                                                <  2:7669068/94‑1 (MQ=255)

                                          tCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCg                                                >  1:1436270/1‑94 (MQ=255)

                                               gagtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg                                           <  2:2222548/93‑1 (MQ=255)

                                               cagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg                                           <  2:3349873/94‑1 (MQ=255)

                                               cagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg                                           <  2:1395232/94‑1 (MQ=255)

                                                agtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATgg                                          >  2:4013685/1‑94 (MQ=255)

                                                agtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATgg                                          <  2:4260110/94‑1 (MQ=255)

                                                agtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATgg                                          <  1:10558389/94‑1 (MQ=255)

                                                 gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGc                                         <  2:1593369/94‑1 (MQ=255)

                                                 gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGc                                         <  2:1820823/94‑1 (MQ=255)

                                                 gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGc                                         >  2:5473688/1‑94 (MQ=255)

                                                  tagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCg                                        >  2:10556589/1‑94 (MQ=255)

                                                   agtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGa                                       >  2:3084892/1‑94 (MQ=255)

                                                    gtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGat                                      >  1:1718316/1‑94 (MQ=255)

                                                     ttCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatc                                     <  2:8417051/94‑1 (MQ=255)

                                                       cGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatcat                                   <  1:10136712/94‑1 (MQ=255)

                                                        gatgatTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatcatc                                  <  1:1250639/94‑1 (MQ=255)

                                                         atgatTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGAtcatca                                 >  2:5801916/1‑94 (MQ=255)

                                                          tgatTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAc                                >  1:9812026/1‑94 (MQ=255)

                                                           gatTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAcg                               <  1:5161133/94‑1 (MQ=255)

                                                           gatTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGGCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAcg                               <  1:6288626/94‑1 (MQ=255)

                                                                 cgcCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTgg                         >  2:9793119/1‑94 (MQ=255)

                                                                 cgcCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTgg                         >  2:4666133/1‑94 (MQ=255)

                                                                  gcCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTCTGGCCGATAGGCAATCGCCATGGCGATCATCACGCGCTGGc                        >  2:9358092/1‑94 (MQ=38)

                                                                   gcTGAATGGGCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAACAGTTGTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCt                       <  1:8813821/93‑1 (MQ=38)

                                                                   ccTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCt                       >  1:9329732/1‑94 (MQ=255)

                                                                   ccTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCt                       >  2:5927692/1‑94 (MQ=255)

                                                                    cTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTc                      >  2:4548407/1‑94 (MQ=255)

                                                                    cTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTc                      >  2:8928147/1‑94 (MQ=255)

                                                                    cTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTc                      >  1:5937091/1‑94 (MQ=255)

                                                                     tGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCa                     >  2:8748778/1‑94 (MQ=255)

                                                                     tGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCa                     >  2:7767825/1‑94 (MQ=255)

                                                                      gAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAt                    <  1:2783752/94‑1 (MQ=255)

                                                                      gAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAt                    <  2:673581/94‑1 (MQ=255)

                                                                       aaTGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATg                   >  1:6091307/1‑94 (MQ=255)

                                                                       aaTGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATg                   >  1:8104262/1‑94 (MQ=255)

                                                                         tgttCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgcc                 >  2:4374879/4‑94 (MQ=255)

                                                                          ggTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCTCTGGCTCATgccg                >  1:2043534/1‑94 (MQ=255)

                                                                            tCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgccgcc              >  1:4494177/1‑94 (MQ=255)

                                                                             cACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGccgccg             >  2:4842354/1‑94 (MQ=255)

                                                                             cACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGccgccg             >  1:10086702/1‑94 (MQ=255)

                                                                              aCGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCgg            >  1:3412025/1‑94 (MQ=255)

                                                                               cGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGa           <  1:7754063/94‑1 (MQ=255)

                                                                                gTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGaa          >  2:5674271/1‑94 (MQ=255)

                                                                                gTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGaa          >  1:324964/1‑94 (MQ=255)

                                                                                 tCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGaaa         >  2:5136889/1‑94 (MQ=255)

                                                                                  ccAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAg        >  2:863345/1‑94 (MQ=255)

                                                                                   cAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGACAGc       >  1:830836/1‑94 (MQ=255)

                                                                                      cgcgGGGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGa    <  1:3018552/94‑1 (MQ=255)

                                                                                        cggcggTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATg  <  2:3791006/94‑1 (MQ=255)

TGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATG  >  NC_000913/3700843‑3701024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 375 total aligned reads displayed.

AAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGCGGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAT  >  NC_000913/3703509‑3703691

AAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGG                                                                                           >  SRR4302545.7544839/1‑94 (MQ=60)

     TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTA                                                                                      <  SRR4302545.10016173/94‑1 (MQ=60)

      TGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGCCGTTAA                                                                                     <  SRR4302545.8161951/94‑1 (MQ=60)

       GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAC                                                                                    <  SRR4302545.6495339/94‑1 (MQ=60)

       GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAC                                                                                    <  SRR4302545.9025771/94‑1 (MQ=60)

       GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAC                                                                                    <  SRR4302545.10840033/94‑1 (MQ=60)

       GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAC                                                                                    <  SRR4302545.4009873/94‑1 (MQ=60)

        CTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACG                                                                                   <  SRR4302545.4862843/94‑1 (MQ=60)

         TGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGC                                                                                  >  SRR4302545.613318/1‑94 (MQ=60)

         CGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGC                                                                                  <  SRR4302545.2067711/94‑1 (MQ=60)

          GCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCC                                                                                 <  SRR4302545.7415160/94‑1 (MQ=60)

          GCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCC                                                                                 >  SRR4302545.5874416/1‑94 (MQ=60)

           CCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCT                                                                                <  SRR4302545.4557694/94‑1 (MQ=60)

           CCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCT                                                                                <  SRR4302545.3214795/94‑1 (MQ=60)

           CCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCT                                                                                <  SRR4302545.9878000/94‑1 (MQ=60)

           CCGGACGGCGCTGCACGCAGAGGCACAGCGCCCCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGTATGCGGCGTTAACGCCT                                                                                <  SRR4302545.5367194/94‑1 (MQ=60)

             GGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTA                                                                              >  SRR4302545.5337574/1‑94 (MQ=60)

              GATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAT                                                                             <  SRR4302545.6596241/94‑1 (MQ=60)

               ATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATC                                                                            >  SRR4302545.7460670/1‑94 (MQ=60)

                TGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCC                                                                           <  SRR4302545.7523633/94‑1 (MQ=60)

                TGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCC                                                                           <  SRR4302545.3656550/94‑1 (MQ=60)

                TGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCC                                                                           <  SRR4302545.4769032/94‑1 (MQ=60)

                 GGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCG                                                                          >  SRR4302545.2258940/1‑94 (MQ=60)

                 GGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCG                                                                          <  SRR4302545.5617998/94‑1 (MQ=60)

                 GGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCG                                                                          <  SRR4302545.5263236/94‑1 (MQ=60)

                  GCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGG                                                                         <  SRR4302545.6116101/94‑1 (MQ=60)

                   CGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGC                                                                        >  SRR4302545.1239733/1‑94 (MQ=60)

                   CGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGC                                                                        >  SRR4302545.6867025/1‑94 (MQ=60)

                    GCTGTACGCAGATGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGGTAACGCCTTATCCGGCC                                                                       >  SRR4302545.9697857/1‑94 (MQ=49)

                    GCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCC                                                                       >  SRR4302545.9493375/1‑94 (MQ=60)

                     CTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGTCCT                                                                      >  SRR4302545.8286669/1‑94 (MQ=60)

                     CTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT                                                                      <  SRR4302545.502544/94‑1 (MQ=60)

                     CTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT                                                                      >  SRR4302545.4181292/1‑94 (MQ=60)

                     CTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT                                                                      <  SRR4302545.9952196/94‑1 (MQ=60)

                      TGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTA                                                                     <  SRR4302545.4942037/94‑1 (MQ=60)

                      TGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTA                                                                     <  SRR4302545.8677792/94‑1 (MQ=60)

                      TGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTA                                                                     >  SRR4302545.2372951/1‑94 (MQ=60)

                       GCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC                                                                    <  SRR4302545.709563/94‑1 (MQ=60)

                       GCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCCTATCCGGCCTAC                                                                    >  SRR4302545.9640237/1‑94 (MQ=60)

                         ACGCAGGGGCACAGCGCCACCGGGGATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAA                                                                  >  SRR4302545.5567025/1‑94 (MQ=40)

                         ACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAA                                                                  >  SRR4302545.4510652/1‑94 (MQ=60)

                          CGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAA                                                                 >  SRR4302545.3835772/1‑94 (MQ=60)

                          CGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAA                                                                 >  SRR4302545.3225651/1‑94 (MQ=60)

                           GCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAA                                                                >  SRR4302545.7841436/1‑94 (MQ=60)

                           GCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAA                                                                >  SRR4302545.622036/1‑94 (MQ=60)

                           GCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAA                                                                >  SRR4302545.3164907/1‑94 (MQ=60)

                            CAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAAT                                                               >  SRR4302545.8579991/1‑94 (MQ=60)

                            CAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAAT                                                               >  SRR4302545.314421/1‑94 (MQ=60)

                             AGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATC                                                              >  SRR4302545.9089314/1‑94 (MQ=58)

                             AGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATC                                                              <  SRR4302545.4877514/94‑1 (MQ=58)

                             AGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATC                                                              >  SRR4302545.542716/1‑94 (MQ=58)

                              GAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCG                                                             <  SRR4302545.1285377/94‑1 (MQ=55)

                               AGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGT                                                            >  SRR4302545.169531/1‑94 (MQ=53)

                               AGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGT                                                            <  SRR4302545.8461397/94‑1 (MQ=53)

                                GGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTG                                                           <  SRR4302545.252018/94‑1 (MQ=51)

                                GGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTG                                                           <  SRR4302545.4112862/94‑1 (MQ=51)

                                 GCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGC                                                          <  SRR4302545.8386265/94‑1 (MQ=48)

                                 GCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGC                                                          <  SRR4302545.8386266/94‑1 (MQ=48)

                                 GCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGC                                                          <  SRR4302545.6527011/94‑1 (MQ=48)

                                  CACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCA                                                         <  SRR4302545.9779678/94‑1 (MQ=46)

                                  CACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCA                                                         <  SRR4302545.6073247/94‑1 (MQ=46)

                                  CACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCA                                                         >  SRR4302545.8358927/1‑94 (MQ=46)

                                  CACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCA                                                         >  SRR4302545.2388763/1‑94 (MQ=46)

                                   ACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAA                                                        <  SRR4302545.4348497/94‑1 (MQ=43)

                                   ACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAA                                                        <  SRR4302545.1439195/94‑1 (MQ=43)

                                    CAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAA                                                       <  SRR4302545.1193865/94‑1 (MQ=41)

                                    CAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAA                                                       <  SRR4302545.7931364/94‑1 (MQ=41)

                                     AGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAAT                                                      >  SRR4302545.6693215/1‑94 (MQ=39)

                                      GCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATT                                                     <  SRR4302545.10738287/94‑1 (MQ=36)

                                      ACGCCACCGGATATACAGATTGTTGACAAAGTGCGCTTTGGTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATT                                                     <  SRR4302545.6319078/94‑1 (MQ=20)

                                       CGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTC                                                    <  SRR4302545.2952308/94‑1 (MQ=34)

                                       CGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTC                                                    <  SRR4302545.6683797/94‑1 (MQ=34)

                                       CGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTC                                                    <  SRR4302545.1134732/94‑1 (MQ=34)

                                        GCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCA                                                   >  SRR4302545.3488206/1‑94 (MQ=31)

                                        GCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCA                                                   >  SRR4302545.5225118/1‑94 (MQ=31)

                                        GCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCA                                                   >  SRR4302545.1095705/1‑94 (MQ=31)

                                        GCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCA                                                   >  SRR4302545.41217/1‑94 (MQ=31)

                                         CCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAA                                                  >  SRR4302545.5531930/1‑94 (MQ=29)

                                         CCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAA                                                  >  SRR4302545.10309519/1‑94 (MQ=29)

                                          CACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAT                                                 <  SRR4302545.9233926/94‑1 (MQ=29)

                                          CACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAT                                                 <  SRR4302545.9635724/94‑1 (MQ=29)

                                          CACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAT                                                 >  SRR4302545.7593504/1‑94 (MQ=29)

                                          CACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAT                                                 <  SRR4302545.1815082/94‑1 (MQ=29)

                                          CACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAT                                                 >  SRR4302545.10023549/1‑94 (MQ=29)

                                           ACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATA                                                >  SRR4302545.4951229/1‑94 (MQ=29)

                                           ACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATA                                                >  SRR4302545.1613752/1‑94 (MQ=29)

                                           ACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATA                                                <  SRR4302545.7907413/94‑1 (MQ=29)

                                           ACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATA                                                >  SRR4302545.9720223/1‑94 (MQ=29)

                                           ACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATA                                                <  SRR4302545.4287898/94‑1 (MQ=29)

                                            CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATAC                                               <  SRR4302545.4260747/94‑1 (MQ=29)

                                            CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATAC                                               <  SRR4302545.6788561/94‑1 (MQ=29)

                                             CGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACA                                              >  SRR4302545.4787130/1‑94 (MQ=29)

                                              GGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACAT                                             <  SRR4302545.5710722/94‑1 (MQ=29)

                                              GGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACAT                                             <  SRR4302545.8061830/94‑1 (MQ=29)

                                               GGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATT                                            <  SRR4302545.4391959/94‑1 (MQ=29)

                                               GGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATT                                            >  SRR4302545.4386842/1‑94 (MQ=29)

                                               GGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATT                                            >  SRR4302545.9855672/1‑94 (MQ=29)

                                               GGTATACAGATGGTTGACAAAGGGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGCGCAAATTCAATACATT                                            <  SRR4302545.1709268/94‑1 (MQ=19)

                                                GTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTG                                           >  SRR4302545.8478431/1‑94 (MQ=29)

                                                GTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTG                                           >  SRR4302545.6407144/1‑94 (MQ=29)

                                                GTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTG                                           >  SRR4302545.4050643/1‑94 (MQ=29)

                                                 TATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC                                          <  SRR4302545.656320/94‑1 (MQ=29)

                                                  ATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA                                         >  SRR4302545.7437107/1‑94 (MQ=29)

                                                  ATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA                                         <  SRR4302545.5832422/94‑1 (MQ=29)

                                                  ATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA                                         >  SRR4302545.7751486/1‑94 (MQ=29)

                                                   TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAG                                        <  SRR4302545.7694603/94‑1 (MQ=29)

                                                   TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAG                                        <  SRR4302545.4535123/94‑1 (MQ=29)

                                                   TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAG                                        <  SRR4302545.8151168/94‑1 (MQ=29)

                                                     CAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAA                                      >  SRR4302545.324125/1‑94 (MQ=29)

                                                     CAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAA                                      >  SRR4302545.306564/1‑94 (MQ=29)

                                                      AGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAT                                     <  SRR4302545.3858110/94‑1 (MQ=31)

                                                      AGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAT                                     >  SRR4302545.7042063/1‑94 (MQ=31)

                                                      AGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAT                                     >  SRR4302545.7152751/1‑94 (MQ=31)

                                                       GATTGTTGACAAAGTGCGCTTTGTGTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATT                                    <  SRR4302545.7936696/94‑1 (MQ=60)

                                                       GATTGGTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATT                                    >  SRR4302545.6988403/1‑94 (MQ=23)

                                                        ATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTT                                   <  SRR4302545.2207/94‑1 (MQ=34)

                                                        ATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTT                                   >  SRR4302545.6455246/1‑94 (MQ=34)

                                                        ATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTT                                   <  SRR4302545.10636243/94‑1 (MQ=34)

                                                        ATTGTTGACAAAGTGCGCTTTGTTTATGCCGGAGGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTT                                   <  SRR4302545.2846232/94‑1 (MQ=32)

                                                        ATTGTTGACAAAGTGCGCTTTGTTTATACCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTT                                   >  SRR4302545.6455245/1‑94 (MQ=60)

                                                         TTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTT                                  >  SRR4302545.10882139/1‑94 (MQ=34)

                                                         TTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTT                                  >  SRR4302545.5577431/1‑94 (MQ=34)

                                                         TTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTT                                  >  SRR4302545.10691692/1‑94 (MQ=34)

                                                          TGTTGACACAGAGCGCTTTGTTTCTGGCGGATGGGGCGTTAACACCCTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTcg                                 >  SRR4302545.6772420/1‑92 (MQ=21)

                                                          TGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTC                                 <  SRR4302545.4454863/94‑1 (MQ=34)

                                                          TGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTC                                 >  SRR4302545.7618266/1‑94 (MQ=34)

                                                          TGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTC                                 >  SRR4302545.8700721/1‑94 (MQ=34)

                                                          TGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTC                                 <  SRR4302545.1274676/94‑1 (MQ=34)

                                                           GTTGACAAAGTGCGCTTTGTTTATGTCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCG                                <  SRR4302545.5178017/94‑1 (MQ=32)

                                                           GTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGTCGTTAGCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCG                                <  SRR4302545.9896762/94‑1 (MQ=44)

                                                           GTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCG                                <  SRR4302545.3475020/94‑1 (MQ=34)

                                                            TTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGT                               <  SRR4302545.4541231/94‑1 (MQ=34)

                                                            TTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGT                               >  SRR4302545.1560692/1‑94 (MQ=34)

                                                             TGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTA                              <  SRR4302545.7223515/94‑1 (MQ=36)

                                                             TGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGACTACAAAATCGAGCAAATGTAATACATTGCAGCATTTTCGTC                              >  SRR4302545.5966781/1‑94 (MQ=3)

                                                              GACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAG                             <  SRR4302545.10499508/94‑1 (MQ=39)

                                                              GACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAG                             >  SRR4302545.9338668/1‑94 (MQ=39)

                                                              GACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAG                             >  SRR4302545.5829710/1‑94 (MQ=39)

                                                               ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGG                            >  SRR4302545.2194434/1‑94 (MQ=41)

                                                               ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGG                            <  SRR4302545.1764346/94‑1 (MQ=41)

                                                               ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGG                            <  SRR4302545.3597745/94‑1 (MQ=41)

                                                               ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGG                            <  SRR4302545.9438339/94‑1 (MQ=41)

                                                               ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGG                            <  SRR4302545.7220999/94‑1 (MQ=41)

                                                                CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGC                           <  SRR4302545.9796524/94‑1 (MQ=43)

                                                                CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGC                           >  SRR4302545.9323337/1‑94 (MQ=41)

                                                                CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGC                           >  SRR4302545.10509039/1‑94 (MQ=41)

                                                                CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGC                           >  SRR4302545.8819124/1‑94 (MQ=41)

                                                                CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGC                           >  SRR4302545.10770349/1‑94 (MQ=41)

                                                                 AAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCC                          >  SRR4302545.796353/1‑94 (MQ=41)

                                                                 AAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCC                          >  SRR4302545.3599512/1‑94 (MQ=41)

                                                                 AAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCC                          >  SRR4302545.2041986/1‑94 (MQ=41)

                                                                 AAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCC                          >  SRR4302545.8079190/1‑94 (MQ=41)

                                                                 AAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCC                          >  SRR4302545.3777722/1‑94 (MQ=41)

                                                                  AAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCT                         <  SRR4302545.8607399/94‑1 (MQ=43)

                                                                      GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATA                     <  SRR4302545.1732014/94‑1 (MQ=53)

                                                                      GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATA                     <  SRR4302545.4133848/94‑1 (MQ=53)

                                                                       CGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAA                    >  SRR4302545.2030467/1‑94 (MQ=60)

                                                                       CGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAA                    <  SRR4302545.2222703/94‑1 (MQ=55)

                                                                       CGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAA                    <  SRR4302545.4408822/94‑1 (MQ=55)

                                                                        GCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAG                   <  SRR4302545.9519271/94‑1 (MQ=58)

                                                                        GCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAG                   <  SRR4302545.750083/94‑1 (MQ=58)

                                                                        GCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAG                   <  SRR4302545.2766726/94‑1 (MQ=58)

                                                                        GCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAG                   >  SRR4302545.3283826/1‑94 (MQ=60)

                                                                         CTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGC                  <  SRR4302545.8626497/94‑1 (MQ=60)

                                                                         CTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTCCAGAATTTTCGTAGGCCTGATAAGG                  >  SRR4302545.2344094/1‑94 (MQ=48)

                                                                          TTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCG                 <  SRR4302545.3917523/94‑1 (MQ=60)

                                                                           TTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGG                <  SRR4302545.1128939/94‑1 (MQ=60)

                                                                           TTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGG                <  SRR4302545.1264746/94‑1 (MQ=60)

                                                                            TGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGA               >  SRR4302545.3952942/1‑94 (MQ=60)

                                                                            TGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGA               <  SRR4302545.84803/94‑1 (MQ=60)

                                                                             GTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAG              <  SRR4302545.3780118/94‑1 (MQ=60)

                                                                             GTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAG              <  SRR4302545.2691942/94‑1 (MQ=60)

                                                                             GTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAG              >  SRR4302545.5283195/1‑94 (MQ=60)

                                                                              TTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGC             >  SRR4302545.4659477/1‑94 (MQ=60)

                                                                               TTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCG            >  SRR4302545.4046436/1‑94 (MQ=60)

                                                                                 ATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCA          >  SRR4302545.10349741/1‑94 (MQ=60)

                                                                                 ATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCA          >  SRR4302545.1850449/1‑94 (MQ=60)

                                                                                   GCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATC        >  SRR4302545.9156928/1‑94 (MQ=60)

                                                                                   GCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATC        <  SRR4302545.10414805/94‑1 (MQ=60)

                                                                                    CCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCA       >  SRR4302545.10016368/1‑94 (MQ=60)

                                                                                    CCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCA       >  SRR4302545.8874645/1‑94 (MQ=60)

                                                                                    CCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAACGGAGCGCATCA       <  SRR4302545.6332734/94‑1 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAGATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      <  SRR4302545.4467922/94‑1 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      <  SRR4302545.8638545/94‑1 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      >  SRR4302545.1920608/1‑94 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      >  SRR4302545.3933227/1‑94 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      >  SRR4302545.1683174/1‑94 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      <  SRR4302545.7100568/94‑1 (MQ=60)

                                                                                     CGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAG      <  SRR4302545.7323017/94‑1 (MQ=60)

                                                                                      GGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGG     >  SRR4302545.5504514/1‑94 (MQ=60)

                                                                                      GGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGG     >  SRR4302545.1346391/1‑94 (MQ=60)

                                                                                      GGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGG     >  SRR4302545.10283570/1‑94 (MQ=60)

                                                                                      GGATGCGGCGTTAACGCCTTATCCGGACTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGG     >  SRR4302545.2540945/1‑94 (MQ=49)

                                                                                       GATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGC    <  SRR4302545.4584379/94‑1 (MQ=60)

                                                                                        ATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCA   <  SRR4302545.4510197/94‑1 (MQ=60)

                                                                                        ATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCA   >  SRR4302545.1631749/1‑94 (MQ=60)

                                                                                        ATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCA   >  SRR4302545.10607498/1‑94 (MQ=60)

                                                                                         TGCGGCGTTAACGCCTTATCCGGTCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAT  <  SRR4302545.5992557/94‑1 (MQ=60)

                                                                                         TGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAT  <  SRR4302545.1232560/94‑1 (MQ=60)

                                                                                         TGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAT  <  SRR4302545.10464625/94‑1 (MQ=60)

AAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGCGGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAT  >  NC_000913/3703509‑3703691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`