Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,703,602 2 bp→GC intergenic (‑183/+124) dppB ← / ← dppA dipeptide transport system permease protein 1/dipeptide transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,703,6020CG99.7% 2481.3 / NA 731intergenic (‑183/+125)dppB/dppAdipeptide transport system permease protein 1/dipeptide transport protein
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (369/359);  total (369/362)
Fisher's exact test for biased strand distribution p-value = 2.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,703,6030GC100.0% 2515.3 / NA 734intergenic (‑184/+124)dppB/dppAdipeptide transport system permease protein 1/dipeptide transport protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (369/365);  total (369/365)

Only 100 of 742 total aligned reads displayed.

TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGCGGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCA  >  NC_000913/3703514‑3703690
                                                                                        ||                                                                                       
 tgctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTaa                                                                                    >  1:6026343/1‑94 (MQ=255)
  gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc                                                                                   <  2:4318336/94‑1 (MQ=255)
  gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc                                                                                   <  2:2733973/94‑1 (MQ=255)
  gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc                                                                                   <  1:3912226/94‑1 (MQ=255)
   ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg                                                                                  <  2:10614244/94‑1 (MQ=255)
    tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGc                                                                                 >  1:747955/1‑94 (MQ=255)
     gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc                                                                                <  1:574267/94‑1 (MQ=255)
      ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt                                                                               <  1:9595254/94‑1 (MQ=255)
      ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt                                                                               <  1:4285015/94‑1 (MQ=255)
      ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt                                                                               <  1:3137477/94‑1 (MQ=255)
       cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCtt                                                                              >  2:288043/1‑94 (MQ=255)
        ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa                                                                             <  2:6054855/94‑1 (MQ=255)
        ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa                                                                             >  1:6542730/1‑94 (MQ=255)
        ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa                                                                             <  1:688271/94‑1 (MQ=255)
        ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa                                                                             >  1:1670392/1‑94 (MQ=255)
        ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa                                                                             >  2:5042936/1‑94 (MQ=255)
        ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTCAACGCCTTa                                                                             >  1:3744475/1‑94 (MQ=255)
          aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc                                                                           >  1:3332069/1‑94 (MQ=255)
          aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc                                                                           <  2:4519596/94‑1 (MQ=255)
          aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc                                                                           >  1:7257344/1‑94 (MQ=255)
          aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc                                                                           <  2:1722983/94‑1 (MQ=255)
           tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc                                                                          <  1:3569358/94‑1 (MQ=255)
             gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg                                                                        <  1:1058106/94‑1 (MQ=255)
             gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg                                                                        <  2:5300337/94‑1 (MQ=255)
              cgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc                                                                       >  1:9480667/1‑94 (MQ=255)
                cTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGTCCt                                                                     >  1:8056415/1‑94 (MQ=255)
                cTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt                                                                     >  2:1397024/1‑94 (MQ=255)
                  gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAc                                                                   <  2:8061520/94‑1 (MQ=255)
                    aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACaa                                                                 <  2:8762653/94‑1 (MQ=255)
                     cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACaaa                                                                >  2:10143718/1‑94 (MQ=255)
                      gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACaaaa                                                               <  2:6919271/94‑1 (MQ=255)
                       cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAAt                                                              >  1:4176778/1‑94 (MQ=255)
                       cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAAt                                                              <  2:567463/94‑1 (MQ=255)
                        agagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATc                                                             >  1:8832842/1‑94 (MQ=255)
                              acaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCaa                                                       <  2:909910/94‑1 (MQ=255)
                               caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCaaa                                                      <  1:1168024/94‑1 (MQ=255)
                                aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAAt                                                     <  2:1958034/94‑1 (MQ=255)
                                  cgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTc                                                   <  1:2882531/94‑1 (MQ=255)
                                     cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAt                                                <  1:10009383/94‑1 (MQ=255)
                                     cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAt                                                >  1:9733753/1‑94 (MQ=255)
                                      aCCGGGTATACGGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACCCCTTATCCGGCCTACAAAATCGTGCAAATTCAATa                                               >  2:9593571/1‑94 (MQ=14)
                                      aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATa                                               <  1:7689693/94‑1 (MQ=255)
                                      aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATa                                               >  1:1576553/1‑94 (MQ=255)
                                      aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATa                                               <  2:2101228/94‑1 (MQ=255)
                                       ccGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATAc                                              <  2:841705/94‑1 (MQ=255)
                                        cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACa                                             >  2:2368069/1‑94 (MQ=255)
                                        cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACa                                             <  2:4648187/94‑1 (MQ=255)
                                         gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACAt                                            <  1:7839577/94‑1 (MQ=255)
                                            tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGc                                         <  1:641980/94‑1 (MQ=255)
                                              taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAg                                       <  1:4017223/94‑1 (MQ=255)
                                               ncNGATTNTTGACAAAGTGCGNTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGa                                      <  2:7795092/93‑1 (MQ=11)
                                               aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGa                                      >  1:5525387/1‑94 (MQ=255)
                                               aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGa                                      >  2:5476295/1‑94 (MQ=255)
                                                cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGaa                                     >  2:411947/1‑94 (MQ=255)
                                                  gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtt                                   >  2:7137102/1‑94 (MQ=255)
                                                   aTTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAttt                                  >  2:6423265/1‑94 (MQ=255)
                                                   aTTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAttt                                  <  1:1271103/94‑1 (MQ=255)
                                                    ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtttt                                 <  2:3419278/94‑1 (MQ=255)
                                                    ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtttt                                 >  2:7588600/1‑94 (MQ=255)
                                                    ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtttt                                 <  2:5760549/94‑1 (MQ=255)
                                                    ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtttt                                 <  2:9474933/94‑1 (MQ=255)
                                                    ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtttt                                 >  1:10385522/1‑94 (MQ=255)
                                                    ttggtgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAAtttt                                 <  2:1614986/94‑1 (MQ=255)
                                                     tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTc                                >  1:8456303/1‑94 (MQ=255)
                                                       ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGt                              >  2:4844779/1‑94 (MQ=255)
                                                       ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGt                              <  2:5594636/94‑1 (MQ=255)
                                                        tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTa                             >  1:10175448/1‑94 (MQ=255)
                                                         gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAg                            >  1:4883320/1‑94 (MQ=255)
                                                         gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAg                            <  2:8976789/94‑1 (MQ=255)
                                                         gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAg                            >  1:9073427/1‑94 (MQ=255)
                                                          aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAgg                           <  1:7027000/94‑1 (MQ=255)
                                                          aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAgg                           <  2:1848589/94‑1 (MQ=255)
                                                          aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAgg                           >  1:2141961/1‑94 (MQ=255)
                                                            aaaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGcc                         >  2:6667496/1‑94 (MQ=255)
                                                            aaaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGcc                         >  2:6540685/1‑94 (MQ=255)
                                                             aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCt                        <  1:8365129/94‑1 (MQ=255)
                                                              aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTg                       <  2:74755/94‑1 (MQ=255)
                                                               gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATCTTCGTAGGCCTGa                      <  2:3725704/94‑1 (MQ=255)
                                                                   gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAg                  <  1:4727468/94‑1 (MQ=255)
                                                                   gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAg                  <  2:7671768/94‑1 (MQ=255)
                                                                    cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGc                 <  2:3149588/94‑1 (MQ=255)
                                                                    cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTCCAGAATTTTCGTAGGCCTGATAAgg                 >  1:2288367/1‑93 (MQ=17)
                                                                     tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCg                <  1:8226995/94‑1 (MQ=255)
                                                                       tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGa              >  2:8625142/1‑94 (MQ=255)
                                                                        gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAg             >  1:5149846/1‑94 (MQ=255)
                                                                          ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAgcg           >  2:10274695/1‑94 (MQ=255)
                                                                            aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCa         <  1:6282753/94‑1 (MQ=255)
                                                                             tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCAt        <  2:8236425/94‑1 (MQ=255)
                                                                             tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCAt        >  2:9687140/1‑94 (MQ=255)
                                                                             tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCAt        <  2:9916060/94‑1 (MQ=255)
                                                                              gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCACTACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATc       <  1:9350045/94‑1 (MQ=255)
                                                                               gcGGATTCGGCGTTCACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCa      <  2:6786089/93‑1 (MQ=14)
                                                                                cGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAg     <  2:3014084/94‑1 (MQ=255)
                                                                                cGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAg     >  1:1874568/1‑94 (MQ=255)
                                                                                 ggATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAgg    <  2:2588467/94‑1 (MQ=255)
                                                                                 ggATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAgg    >  1:5365040/1‑94 (MQ=255)
                                                                                 ggATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAgg    <  2:9805794/94‑1 (MQ=255)
                                                                                 ggATGCGGCGTTAACGCCTTATCCGGACTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAgg    >  1:2480949/1‑94 (MQ=14)
                                                                                  gATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc   <  1:4470306/94‑1 (MQ=255)
                                                                                   aTGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa  <  1:4398672/94‑1 (MQ=255)
                                                                                        ||                                                                                       
TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGCGGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGAATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCA  >  NC_000913/3703514‑3703690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 426 total aligned reads displayed.
AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCACCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCACC  >  NC_000913/3703764‑3703950
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AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCG                                                                                               <  SRR4302545.4980361/94‑1 (MQ=60)
AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCG                                                                                               <  SRR4302545.850997/94‑1 (MQ=60)
AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCG                                                                                               >  SRR4302545.5670791/1‑94 (MQ=60)
AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCG                                                                                               >  SRR4302545.5499488/1‑94 (MQ=60)
AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCAATGATCAGTGCCGGAGCCTGATCGTGCATCG                                                                                               >  SRR4302545.4683290/1‑94 (MQ=60)
   GGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCA                                                                                            <  SRR4302545.1952602/94‑1 (MQ=60)
    GATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCAC                                                                                           <  SRR4302545.3581018/94‑1 (MQ=60)
     ATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACC                                                                                          >  SRR4302545.7581674/1‑94 (MQ=60)
     ATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACC                                                                                          <  SRR4302545.386396/94‑1 (MQ=60)
      TCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCT                                                                                         <  SRR4302545.10252064/94‑1 (MQ=60)
      TCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCT                                                                                         >  SRR4302545.4239950/1‑94 (MQ=60)
      TCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCT                                                                                         >  SRR4302545.9419845/1‑94 (MQ=60)
      TCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCT                                                                                         <  SRR4302545.10724188/94‑1 (MQ=60)
       CAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTG                                                                                        >  SRR4302545.4785472/1‑94 (MQ=60)
        AACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGC                                                                                       <  SRR4302545.2812952/94‑1 (MQ=60)
        AACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGC                                                                                       <  SRR4302545.10806653/94‑1 (MQ=60)
        AACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGC                                                                                       <  SRR4302545.5030782/94‑1 (MQ=60)
         ACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCG                                                                                      <  SRR4302545.3466546/94‑1 (MQ=60)
          CCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGC                                                                                     >  SRR4302545.328955/1‑94 (MQ=60)
           CACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCT                                                                                    <  SRR4302545.7535854/94‑1 (MQ=60)
           CACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCT                                                                                    >  SRR4302545.6003237/1‑94 (MQ=60)
           CACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCT                                                                                    >  SRR4302545.3411247/1‑94 (MQ=60)
            ACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTT                                                                                   >  SRR4302545.7456416/1‑94 (MQ=60)
            ACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTT                                                                                   <  SRR4302545.1504490/94‑1 (MQ=60)
             CATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTG                                                                                  >  SRR4302545.9359318/1‑94 (MQ=60)
             CATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTG                                                                                  <  SRR4302545.9178432/94‑1 (MQ=60)
             CATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTG                                                                                  <  SRR4302545.6833867/94‑1 (MQ=60)
             CATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTG                                                                                  >  SRR4302545.6415370/1‑94 (MQ=60)
             CATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGGGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCCCCCGCGCTTG                                                                                  >  SRR4302545.4349298/1‑94 (MQ=60)
               TAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTT                                                                                <  SRR4302545.7335068/94‑1 (MQ=60)
                AGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTT                                                                               >  SRR4302545.3965185/1‑94 (MQ=60)
                 GCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTG                                                                              <  SRR4302545.418831/94‑1 (MQ=60)
                 GCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTG                                                                              >  SRR4302545.8331363/1‑94 (MQ=60)
                 GCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTG                                                                              <  SRR4302545.7661637/94‑1 (MQ=60)
                  CCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGT                                                                             >  SRR4302545.17319/1‑94 (MQ=60)
                   CTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTA                                                                            >  SRR4302545.6716796/1‑94 (MQ=60)
                   CTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTA                                                                            >  SRR4302545.6536536/1‑94 (MQ=60)
                   CTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTA                                                                            >  SRR4302545.7886492/1‑94 (MQ=60)
                    TTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTAC                                                                           >  SRR4302545.5092892/1‑94 (MQ=60)
                    TTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTAC                                                                           <  SRR4302545.2129150/94‑1 (MQ=60)
                     TTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACA                                                                          <  SRR4302545.7025657/94‑1 (MQ=60)
                     TTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACA                                                                          >  SRR4302545.13547/1‑94 (MQ=60)
                        ACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTT                                                                       <  SRR4302545.8418960/94‑1 (MQ=60)
                        ACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTT                                                                       <  SRR4302545.2412897/94‑1 (MQ=60)
                        ACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTT                                                                       >  SRR4302545.9862830/1‑94 (MQ=60)
                          TTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCA                                                                     >  SRR4302545.10003776/1‑94 (MQ=60)
                            CTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAAC                                                                   <  SRR4302545.9444162/94‑1 (MQ=60)
                            CTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAAC                                                                   <  SRR4302545.5586604/94‑1 (MQ=60)
                            CTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAAC                                                                   >  SRR4302545.10740185/1‑94 (MQ=60)
                            CTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAAC                                                                   <  SRR4302545.1120935/94‑1 (MQ=60)
                             TTTACGTACCTGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCGGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACG                                                                  <  SRR4302545.5138325/94‑1 (MQ=60)
                             TTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACG                                                                  <  SRR4302545.10672172/94‑1 (MQ=60)
                             TTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACG                                                                  <  SRR4302545.1866202/94‑1 (MQ=60)
                             TTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCAACCTGCGCTTTCTTGTGCAGTTTAACG                                                                  >  SRR4302545.7754940/1‑94 (MQ=60)
                               TACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCG                                                                >  SRR4302545.9036693/1‑94 (MQ=60)
                               TACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCG                                                                <  SRR4302545.1616824/94‑1 (MQ=60)
                               TACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCG                                                                <  SRR4302545.564999/94‑1 (MQ=60)
                                ACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGT                                                               >  SRR4302545.10427523/1‑94 (MQ=60)
                                 CGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTT                                                              <  SRR4302545.2155770/94‑1 (MQ=60)
                                 CGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTT                                                              <  SRR4302545.3694555/94‑1 (MQ=60)
                                 CGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTT                                                              >  SRR4302545.1311722/1‑94 (MQ=60)
                                 CGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTT                                                              >  SRR4302545.10148579/1‑94 (MQ=60)
                                  GTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTT                                                             <  SRR4302545.4715197/94‑1 (MQ=60)
                                  GTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTT                                                             >  SRR4302545.7308055/1‑94 (MQ=60)
                                  GTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTT                                                             >  SRR4302545.1582380/1‑94 (MQ=60)
                                   TACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTT                                                            >  SRR4302545.4140366/1‑94 (MQ=60)
                                   TACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTA                                                            >  SRR4302545.4078278/1‑94 (MQ=60)
                                    ACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTAT                                                           >  SRR4302545.9045518/1‑94 (MQ=60)
                                    ACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTAT                                                           <  SRR4302545.2885254/94‑1 (MQ=60)
                                     CCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATT                                                          >  SRR4302545.10041132/1‑94 (MQ=60)
                                     CCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATT                                                          <  SRR4302545.630103/94‑1 (MQ=60)
                                     CCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATT                                                          >  SRR4302545.10908359/1‑94 (MQ=60)
                                     CCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTCGTACAGTTCAACGCGTTTATT                                                          <  SRR4302545.2576909/94‑1 (MQ=60)
                                     CCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCACCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATT                                                          <  SRR4302545.10338679/94‑1 (MQ=60)
                                      CGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTG                                                         <  SRR4302545.394621/94‑1 (MQ=60)
                                      CGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTG                                                         >  SRR4302545.824823/1‑94 (MQ=60)
                                      CGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTG                                                         <  SRR4302545.8709921/94‑1 (MQ=60)
                                       GGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGT                                                        <  SRR4302545.4654429/94‑1 (MQ=60)
                                       GGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGT                                                        <  SRR4302545.9772645/94‑1 (MQ=60)
                                        GTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTG                                                       <  SRR4302545.3016003/94‑1 (MQ=60)
                                        GTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTG                                                       <  SRR4302545.864122/94‑1 (MQ=60)
                                        GTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTG                                                       <  SRR4302545.4218634/94‑1 (MQ=60)
                                         TTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGG                                                      <  SRR4302545.210656/94‑1 (MQ=60)
                                         TTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGG                                                      <  SRR4302545.10143618/94‑1 (MQ=60)
                                           CAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTC                                                    >  SRR4302545.10616110/1‑94 (MQ=60)
                                           CAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTC                                                    <  SRR4302545.3404975/94‑1 (MQ=60)
                                           CAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTC                                                    <  SRR4302545.648091/94‑1 (MQ=60)
                                            AAACACGGTTGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCG                                                   <  SRR4302545.8973738/94‑1 (MQ=60)
                                            AAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCG                                                   <  SRR4302545.9124334/94‑1 (MQ=60)
                                              ACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTC                                                 <  SRR4302545.5740225/94‑1 (MQ=60)
                                              ACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTC                                                 <  SRR4302545.2440172/94‑1 (MQ=60)
                                              ACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTC                                                 <  SRR4302545.687376/94‑1 (MQ=60)
                                              ACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTC                                                 <  SRR4302545.3031281/94‑1 (MQ=60)
                                               CACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCG                                                >  SRR4302545.6266808/1‑94 (MQ=60)
                                               CACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCG                                                <  SRR4302545.6738207/94‑1 (MQ=60)
                                               CACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCG                                                <  SRR4302545.8283723/94‑1 (MQ=60)
                                                 CGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGT                                              <  SRR4302545.9907694/94‑1 (MQ=60)
                                                 CGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGT                                              >  SRR4302545.8128392/1‑94 (MQ=60)
                                                 CGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGT                                              >  SRR4302545.3328757/1‑94 (MQ=60)
                                                  GGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGTATCGCCGCCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTA                                             <  SRR4302545.5175999/94‑1 (MQ=60)
                                                  GGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTA                                             <  SRR4302545.6037732/94‑1 (MQ=60)
                                                  GGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTA                                             <  SRR4302545.1172260/94‑1 (MQ=60)
                                                   GTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAG                                            <  SRR4302545.4908309/94‑1 (MQ=60)
                                                   GTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAG                                            <  SRR4302545.1940588/94‑1 (MQ=60)
                                                   GTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAG                                            <  SRR4302545.10293449/94‑1 (MQ=60)
                                                    TGGAGTGAGCGATGATCAGTGCCGGAGACTGATCGTGCATCCCCACCTGCGCTCGTTTGTACAGTTATATGCGATTATTGTGTTCGTCGGTAGG                                           >  SRR4302545.9115257/1‑94 (MQ=60)
                                                     GGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCA                                          <  SRR4302545.1251651/94‑1 (MQ=60)
                                                      GAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCAC                                         >  SRR4302545.9582386/1‑94 (MQ=60)
                                                      GAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCAC                                         <  SRR4302545.5894963/94‑1 (MQ=60)
                                                       AGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACG                                        >  SRR4302545.7237655/1‑94 (MQ=60)
                                                       AGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACG                                        >  SRR4302545.8997429/1‑94 (MQ=60)
                                                        GTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGC                                       <  SRR4302545.1754690/94‑1 (MQ=60)
                                                         TGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCG                                      <  SRR4302545.5911572/94‑1 (MQ=60)
                                                         TGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCG                                      <  SRR4302545.9346776/94‑1 (MQ=60)
                                                           AGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCC                                    >  SRR4302545.8429008/1‑94 (MQ=60)
                                                           AGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCC                                    >  SRR4302545.3627108/1‑94 (MQ=60)
                                                           AGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCC                                    <  SRR4302545.6997082/94‑1 (MQ=60)
                                                           AGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCC                                    >  SRR4302545.973551/1‑94 (MQ=60)
                                                           AGCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCC                                    >  SRR4302545.232611/1‑94 (MQ=60)
                                                            GCGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCG                                   <  SRR4302545.5009152/94‑1 (MQ=60)
                                                            GCCATGATCAGTGCCGGATCCTTATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCG                                   <  SRR4302545.4627407/94‑1 (MQ=60)
                                                             CGATGATCAGTGCCGGATACTGATCGTGCATCGCCACCTGCGCTTGTTTTTACAGTTCAAGGCGTTTATTGTGGTCGTCGGAAGCACGAGCCGG                                  >  SRR4302545.4126941/1‑94 (MQ=60)
                                                             CGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCTACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGG                                  >  SRR4302545.4272804/1‑94 (MQ=60)
                                                             CGATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGG                                  >  SRR4302545.4085389/1‑94 (MQ=60)
                                                               ATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTT                                >  SRR4302545.7987028/1‑94 (MQ=60)
                                                               ATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTT                                <  SRR4302545.5115613/94‑1 (MQ=60)
                                                               ATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTT                                >  SRR4302545.6190414/1‑94 (MQ=60)
                                                               ATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTT                                >  SRR4302545.7165851/1‑94 (MQ=60)
                                                               ATGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTT                                <  SRR4302545.8663136/94‑1 (MQ=60)
                                                                TGATCAGTGCCGGAGCCTGATCGTGCATCGCCGCCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTG                               <  SRR4302545.7081930/94‑1 (MQ=60)
                                                                TGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTG                               <  SRR4302545.26315/94‑1 (MQ=60)
                                                                TGATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTG                               <  SRR4302545.2762083/94‑1 (MQ=60)
                                                                 GATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGA                              >  SRR4302545.9647502/1‑94 (MQ=60)
                                                                 GATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGA                              <  SRR4302545.8799408/94‑1 (MQ=60)
                                                                 GATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGA                              >  SRR4302545.8062157/1‑94 (MQ=60)
                                                                  ATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAA                             <  SRR4302545.1028668/94‑1 (MQ=60)
                                                                  ATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAA                             <  SRR4302545.6663279/94‑1 (MQ=60)
                                                                  ATCAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGCAGCACGCGCCGGTTGAA                             >  SRR4302545.1667375/1‑94 (MQ=60)
                                                                    CAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATC                           <  SRR4302545.6649919/94‑1 (MQ=60)
                                                                    CAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATC                           <  SRR4302545.4769730/94‑1 (MQ=60)
                                                                    CAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATC                           <  SRR4302545.5201854/94‑1 (MQ=60)
                                                                    CAGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATC                           >  SRR4302545.2268045/1‑94 (MQ=60)
                                                                     AGTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCTCCGGTTGAATCA                          <  SRR4302545.4336522/94‑1 (MQ=60)
                                                                      GTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGCATCAG                         >  SRR4302545.5144587/1‑94 (MQ=60)
                                                                      GTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAG                         <  SRR4302545.5368093/94‑1 (MQ=60)
                                                                      GTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAG                         <  SRR4302545.8045036/94‑1 (MQ=60)
                                                                      GTGCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAG                         >  SRR4302545.7885199/1‑94 (MQ=60)
                                                                        GCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGAT                       <  SRR4302545.6598867/94‑1 (MQ=60)
                                                                        GCCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGAT                       <  SRR4302545.4860186/94‑1 (MQ=60)
                                                                         CCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGACTCAGATC                      >  SRR4302545.9458267/1‑94 (MQ=60)
                                                                         CCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATC                      <  SRR4302545.1657512/94‑1 (MQ=60)
                                                                         CCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATC                      >  SRR4302545.7832438/1‑94 (MQ=60)
                                                                         CCGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATC                      <  SRR4302545.8932614/94‑1 (MQ=60)
                                                                          CGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCT                     <  SRR4302545.5976070/94‑1 (MQ=60)
                                                                          CGGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCT                     <  SRR4302545.4461526/94‑1 (MQ=60)
                                                                           GGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTT                    <  SRR4302545.9731679/94‑1 (MQ=60)
                                                                           GGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTT                    >  SRR4302545.2355/1‑94 (MQ=60)
                                                                           GGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTT                    <  SRR4302545.7933447/94‑1 (MQ=60)
                                                                           GGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTT                    >  SRR4302545.594784/1‑94 (MQ=60)
                                                                           GGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTT                    <  SRR4302545.6431633/94‑1 (MQ=60)
                                                                           CGAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTT                    <  SRR4302545.9238094/94‑1 (MQ=60)
                                                                            GAGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTC                   <  SRR4302545.5385816/94‑1 (MQ=60)
                                                                             AGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGGCGGGTGAATCAGATCTTCA                  >  SRR4302545.1792341/1‑94 (MQ=60)
                                                                             AGCCTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCA                  >  SRR4302545.2531708/1‑94 (MQ=60)
                                                                                CTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAAC               >  SRR4302545.4570956/1‑94 (MQ=60)
                                                                                CTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAAC               <  SRR4302545.1217392/94‑1 (MQ=60)
                                                                                CTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAAC               >  SRR4302545.6559687/1‑94 (MQ=60)
                                                                                CTGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAAC               <  SRR4302545.7495631/94‑1 (MQ=60)
                                                                                 TGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACG              >  SRR4302545.609382/1‑94 (MQ=60)
                                                                                 TGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACG              >  SRR4302545.8593189/1‑94 (MQ=60)
                                                                                 TGATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACG              >  SRR4302545.3148650/1‑94 (MQ=60)
                                                                                  GATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGG             <  SRR4302545.8205333/94‑1 (MQ=60)
                                                                                  GATCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGG             >  SRR4302545.2942496/1‑94 (MQ=60)
                                                                                    TCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTT           >  SRR4302545.10483691/1‑94 (MQ=60)
                                                                                    TCGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTT           <  SRR4302545.3025009/94‑1 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCGACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          <  SRR4302545.8316472/94‑1 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          <  SRR4302545.1431638/94‑1 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          >  SRR4302545.9219410/1‑94 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          <  SRR4302545.4373176/94‑1 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          >  SRR4302545.3678804/1‑94 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          <  SRR4302545.429606/94‑1 (MQ=60)
                                                                                     CGTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTT          <  SRR4302545.8784275/94‑1 (MQ=60)
                                                                                      GTGCATCGTCCCCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTG         <  SRR4302545.3614917/94‑1 (MQ=60)
                                                                                      GTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTG         <  SRR4302545.8875095/94‑1 (MQ=60)
                                                                                      GTGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTG         <  SRR4302545.1842163/94‑1 (MQ=60)
                                                                                       TGCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGT        >  SRR4302545.3221010/1‑94 (MQ=60)
                                                                                        TCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTA       <  SRR4302545.492233/94‑1 (MQ=60)
                                                                                        GCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTA       >  SRR4302545.5682763/1‑94 (MQ=60)
                                                                                        GCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTA       <  SRR4302545.421091/94‑1 (MQ=60)
                                                                                        GCATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTA       <  SRR4302545.3990834/94‑1 (MQ=60)
                                                                                         CATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAAATCTTCAAACGGTTTGTAG      >  SRR4302545.4113983/1‑94 (MQ=60)
                                                                                          ATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGC     >  SRR4302545.1917318/1‑94 (MQ=60)
                                                                                          ATCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGC     <  SRR4302545.10468892/94‑1 (MQ=60)
                                                                                           TCGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCA    <  SRR4302545.1245022/94‑1 (MQ=60)
                                                                                            CGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCAC   <  SRR4302545.1480684/94‑1 (MQ=60)
                                                                                            CGCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCAC   <  SRR4302545.5514300/94‑1 (MQ=60)
                                                                                            CGCCACCTGCGCTTATTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCAC   <  SRR4302545.7122292/94‑1 (MQ=60)
                                                                                             GCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCACC  >  SRR4302545.9718180/1‑94 (MQ=60)
                                                                                             GCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCACC  <  SRR4302545.7725685/94‑1 (MQ=60)
                                                                                             GCCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCACC  <  SRR4302545.2720222/94‑1 (MQ=60)
                                                                                             |                                                                                             
AATGGATCAACCACATAGCCTTTAACTTCTTTACGTACCGGTTCAAACACGGTGGAGTGAGCGATGATCAGTGCCGGAGCCTGATCGTGCATCACCACCTGCGCTTGTTTGTACAGTTCAACGCGTTTATTGTGGTCGTCGGTAGCACGCGCCGGTTGAATCAGATCTTCAAACGGTTTGTAGCACC  >  NC_000913/3703764‑3703950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑