Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,765,203	A→T	Q119L (CAG→CTG)	yibJ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,765,203	0	A	T	99.0%	324.1 / ‑4.9	95	Q119L (CAG→CTG)	yibJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (55/39); total (56/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 117 total aligned reads displayed.

CCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC  >  NC_000913/3765183‑3765293

ccGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCg                   >  1:3609990/1‑94 (MQ=9)

ccGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCg                   <  2:19839/94‑1 (MQ=9)

ccGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCg                   <  2:4762482/94‑1 (MQ=9)

ccGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCg                   >  2:8158072/1‑94 (MQ=31)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  >  1:1804269/1‑94 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  >  2:2813702/1‑94 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  <  2:5552146/94‑1 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  >  2:3562028/1‑94 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  >  2:869938/1‑94 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  >  1:8134521/1‑94 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  <  1:814581/94‑1 (MQ=12)

 cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCgg                  >  2:4082619/1‑94 (MQ=12)

  gCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGt                 >  2:4918947/1‑94 (MQ=255)

  gCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGt                 <  1:8614128/94‑1 (MQ=255)

   cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGTCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGACTCCGGtt                >  2:4751767/1‑93 (MQ=11)

   cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                >  2:7477465/1‑94 (MQ=255)

   cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                <  1:4254459/94‑1 (MQ=255)

   cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                >  1:8776846/1‑94 (MQ=255)

   cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                >  2:9646241/1‑94 (MQ=255)

    tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa               >  1:3045941/1‑94 (MQ=255)

    tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa               <  1:10304432/94‑1 (MQ=255)

    tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa               <  1:10304224/94‑1 (MQ=255)

    tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa               >  2:7055914/1‑94 (MQ=255)

    tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa               >  1:9544207/1‑94 (MQ=255)

     attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt              >  2:5873406/1‑94 (MQ=255)

     attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt              <  1:1999909/94‑1 (MQ=255)

     attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt              >  2:9274207/1‑94 (MQ=255)

     attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt              >  2:8334774/1‑94 (MQ=255)

     attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt              >  2:5962862/1‑94 (MQ=255)

      ttatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGCATCCGGTCATa             >  2:8659681/1‑94 (MQ=255)

      ttatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATa             >  2:8033250/1‑94 (MQ=255)

      ttatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATa             >  1:4968521/1‑94 (MQ=255)

       tatGCCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaa            <  1:8940837/94‑1 (MQ=255)

       tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAGTCCGATCATaa            >  2:1961017/1‑94 (MQ=11)

       tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAtga            <  1:2617058/94‑3 (MQ=255)

       tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaa            <  1:5967153/94‑1 (MQ=255)

       tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaa            >  2:9354231/1‑94 (MQ=255)

       tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaa            >  1:2559651/1‑94 (MQ=255)

        atGCCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa           <  1:7703680/94‑1 (MQ=255)

        atGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa           <  2:3357147/94‑1 (MQ=255)

        atGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa           <  1:2452816/94‑1 (MQ=255)

         tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAt          <  1:5150253/94‑1 (MQ=255)

         tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAt          >  1:7833691/1‑94 (MQ=255)

         tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAt          >  1:6394637/1‑94 (MQ=255)

         tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAt          >  1:6214463/1‑94 (MQ=255)

         tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAt          <  1:4196200/94‑1 (MQ=255)

          gACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg         >  2:4068414/1‑94 (MQ=255)

          gACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg         <  1:7253208/94‑1 (MQ=255)

          gACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg         <  2:9336635/94‑1 (MQ=255)

          gACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg         <  2:10532607/94‑1 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATga        >  2:9825065/1‑93 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGt        <  1:2278354/94‑1 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGt        >  1:4436844/1‑94 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGt        <  2:7310546/94‑1 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGt        <  1:5082946/94‑1 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGt        >  1:1471052/1‑94 (MQ=255)

           aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAATATCCGGTGAATCCGGTCATAAATGt        >  1:1471053/1‑94 (MQ=14)

            cccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa       <  2:2025210/94‑1 (MQ=255)

            cccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa       >  2:2013725/1‑94 (MQ=255)

            cccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa       <  1:10343972/94‑1 (MQ=255)

            cccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa       <  2:3702094/94‑1 (MQ=255)

             ctgctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg      >  1:8266137/3‑94 (MQ=255)

             cctctgctgGGGCGGTATATCGCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg      <  1:651844/91‑1 (MQ=14)

             ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg      <  1:9929893/94‑1 (MQ=255)

             ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg      >  2:3088113/1‑94 (MQ=255)

             ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg      >  2:3301418/1‑94 (MQ=255)

             ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg      <  2:4908781/94‑1 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATTCGTTGAATCCGGTCATAAATGTAGa     >  1:1371509/1‑94 (MQ=17)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     <  1:2213057/94‑1 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     <  2:7148274/94‑1 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  1:4710994/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  2:8895995/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  1:9430696/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  1:1371510/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  2:1035500/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     <  2:10227536/94‑1 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  2:2088567/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     <  2:2246847/94‑1 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     >  2:3522232/1‑94 (MQ=255)

              cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa     <  1:9451431/94‑1 (MQ=255)

               gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGGGGGAATTTTTTTCAGTATCCGTTGAATCCGGTCATAAATGTAGAt    >  1:1125575/1‑94 (MQ=17)

               gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt    >  2:6022845/1‑94 (MQ=255)

               gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt    <  2:680728/94‑1 (MQ=255)

               gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt    <  2:2567613/94‑1 (MQ=255)

               gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt    >  1:5157885/1‑94 (MQ=255)

               gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt    <  1:1777725/94‑1 (MQ=255)

                gtGCTGGGGCGGTATATCAGTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   <  2:3453861/93‑1 (MQ=17)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCGGTTGAGTCTGGTCATAAATGAGGATc   >  1:5561305/1‑94 (MQ=14)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   <  1:209970/94‑1 (MQ=255)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   >  1:5561306/1‑94 (MQ=255)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   >  2:7174208/1‑94 (MQ=255)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   <  2:6206698/94‑1 (MQ=255)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   >  1:9810036/1‑94 (MQ=255)

                ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   <  2:10372148/94‑1 (MQ=255)

                ctgctgGGGCGGGATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc   <  1:8158553/94‑1 (MQ=255)

                 tGCTGGGGCGGTATATTACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc  <  2:4158668/94‑1 (MQ=255)

                 tGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc  >  2:1078879/1‑94 (MQ=255)

                 tGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc  <  2:7260643/94‑1 (MQ=255)

                 tGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc  >  2:6535649/1‑94 (MQ=255)

                 tGCTGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc  <  2:5029714/94‑1 (MQ=255)

CCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC  >  NC_000913/3765183‑3765293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 350 total aligned reads displayed.

GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA  >  NC_000913/3765141‑3765327

GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGG                                                                                               <  SRR4302545.2119073/94‑1 (MQ=0)

 CAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGC                                                                                              <  SRR4302545.2637869/94‑1 (MQ=0)

  AGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACT                                                                                             >  SRR4302545.3542991/1‑94 (MQ=0)

  AGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACT                                                                                             >  SRR4302545.4693183/1‑94 (MQ=0)

  AGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCT                                                                                             >  SRR4302545.898472/1‑94 (MQ=0)

   GCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTG                                                                                            <  SRR4302545.6080608/94‑1 (MQ=0)

   GCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTG                                                                                            <  SRR4302545.8460064/94‑1 (MQ=0)

    CAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGA                                                                                           >  SRR4302545.2839827/1‑94 (MQ=0)

     CGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAA                                                                                          <  SRR4302545.3120855/94‑1 (MQ=0)

     AGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAA                                                                                          <  SRR4302545.1430513/94‑1 (MQ=0)

      GTATGATGAGGAGTCCGGCTTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAG                                                                                         <  SRR4302545.2251646/94‑1 (MQ=0)

      GTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAG                                                                                         <  SRR4302545.4378047/94‑1 (MQ=0)

       TATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGG                                                                                        <  SRR4302545.7857872/94‑1 (MQ=0)

        ATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGG                                                                                       <  SRR4302545.9336313/94‑1 (MQ=0)

        ATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGG                                                                                       >  SRR4302545.10004624/1‑94 (MQ=0)

         TGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGG                                                                                      >  SRR4302545.7070394/1‑94 (MQ=0)

         TGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGG                                                                                      >  SRR4302545.269170/1‑94 (MQ=0)

          GATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGG                                                                                     <  SRR4302545.9012667/94‑1 (MQ=0)

          GATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGG                                                                                     <  SRR4302545.5502507/94‑1 (MQ=0)

           ATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGG                                                                                    >  SRR4302545.8340371/1‑94 (MQ=0)

           ATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGG                                                                                    >  SRR4302545.852999/1‑94 (MQ=0)

           ATGAGCAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGG                                                                                    >  SRR4302545.6432734/1‑94 (MQ=0)

            TGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGA                                                                                   <  SRR4302545.3897072/94‑1 (MQ=0)

             GAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGAT                                                                                  >  SRR4302545.2467744/1‑94 (MQ=0)

               GGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGG                                                                                <  SRR4302545.7781216/94‑1 (MQ=0)

               GGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGG                                                                                <  SRR4302545.1269809/94‑1 (MQ=0)

               GGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGG                                                                                >  SRR4302545.6704722/1‑94 (MQ=0)

                GAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGA                                                                               <  SRR4302545.8813500/94‑1 (MQ=0)

                 AGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAA                                                                              >  SRR4302545.3540957/1‑94 (MQ=0)

                  GTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAAT                                                                             <  SRR4302545.8458824/94‑1 (MQ=0)

                    CCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTT                                                                           <  SRR4302545.5212511/94‑1 (MQ=0)

                    CCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTT                                                                           <  SRR4302545.1653751/94‑1 (MQ=0)

                    CCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTT                                                                           <  SRR4302545.9571349/94‑1 (MQ=0)

                     CGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTT                                                                          >  SRR4302545.1341438/1‑94 (MQ=0)

                      GGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTT                                                                         >  SRR4302545.8937030/1‑94 (MQ=0)

                       GCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTA                                                                        >  SRR4302545.273469/1‑94 (MQ=0)

                       GCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGGATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAAATTTTA                                                                        >  SRR4302545.4340876/1‑94 (MQ=0)

                       GCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGGGGAATCTCACTCAGGATACGATTGGGCTGAAGGGGGGAcggcgtttttc                                                                        >  SRR4302545.3694205/1‑83 (MQ=0)

                       GCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTA                                                                        >  SRR4302545.3300900/1‑94 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTAT                                                                       >  SRR4302545.1835391/1‑94 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTAT                                                                       <  SRR4302545.6829040/94‑1 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTAT                                                                       >  SRR4302545.9240766/1‑94 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTAT                                                                       <  SRR4302545.8876393/94‑1 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTAT                                                                       >  SRR4302545.5039284/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATC                                                                      <  SRR4302545.10215700/94‑1 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATC                                                                      >  SRR4302545.6853263/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATC                                                                      >  SRR4302545.6576287/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATC                                                                      <  SRR4302545.6898349/94‑1 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATC                                                                      >  SRR4302545.1214236/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATC                                                                      >  SRR4302545.7527469/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATA                                                                      >  SRR4302545.10934687/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCCCTGGAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGGTGGAATTTTTATC                                                                      >  SRR4302545.10795338/1‑94 (MQ=0)

                          TGTATTACAACCGCCACCGTTATGATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCA                                                                     <  SRR4302545.7499497/94‑1 (MQ=0)

                          TGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCA                                                                     <  SRR4302545.6532443/94‑1 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAG                                                                    >  SRR4302545.2871712/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAG                                                                    >  SRR4302545.4034914/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAG                                                                    >  SRR4302545.6747033/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAG                                                                    <  SRR4302545.5828688/94‑1 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAG                                                                    <  SRR4302545.5554483/94‑1 (MQ=0)

                            TATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGT                                                                   >  SRR4302545.4321236/1‑94 (MQ=0)

                            TATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGT                                                                   <  SRR4302545.3606879/94‑1 (MQ=0)

                            TATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGT                                                                   >  SRR4302545.9923553/1‑94 (MQ=0)

                            TATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGT                                                                   <  SRR4302545.3148597/94‑1 (MQ=0)

                             ATTACAACGGCCACCGCTCTTATGACCCGCTGCTGGAGCGGTATATCACTCAGGGTCCGGTTGGACTGAAGAGGGGATGGAATTTTTATCAGTA                                                                  >  SRR4302545.7561834/1‑94 (MQ=0)

                             ATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTA                                                                  <  SRR4302545.4715808/94‑1 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATC                                                                <  SRR4302545.816468/94‑1 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATTAGTATC                                                                >  SRR4302545.3210257/1‑94 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATC                                                                <  SRR4302545.9821735/94‑1 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATC                                                                >  SRR4302545.864159/1‑94 (MQ=0)

                                tcagccgctaccgaTATTATGTCCCGCTGCAGGCGCAGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCC                                                               <  SRR4302545.10401051/80‑1 (MQ=0)

                                ACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCC                                                               <  SRR4302545.8603006/94‑1 (MQ=0)

                                ACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCC                                                               <  SRR4302545.3771429/94‑1 (MQ=0)

                                ACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCC                                                               >  SRR4302545.6237649/1‑94 (MQ=0)

                                ACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCC                                                               >  SRR4302545.4048524/1‑94 (MQ=0)

                                 CAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCG                                                              <  SRR4302545.3457418/94‑1 (MQ=0)

                                 CAACCGCCACCGCTATTATGACCCGCTGCAGGGTCGGCATATCACTCAGGATCTGAATGGGCTGAAGGGGGGATGGAATTTTTATCAGTACCCG                                                              <  SRR4302545.6422218/94‑1 (MQ=0)

                                 CAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCG                                                              >  SRR4302545.6294975/1‑94 (MQ=0)

                                  AACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGT                                                             <  SRR4302545.1811361/94‑1 (MQ=0)

                                  AACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGT                                                             >  SRR4302545.8803529/1‑94 (MQ=0)

                                  AACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGT                                                             <  SRR4302545.10245458/94‑1 (MQ=0)

                                   ACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTT                                                            >  SRR4302545.3564909/1‑94 (MQ=0)

                                   ACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTT                                                            >  SRR4302545.5422666/1‑94 (MQ=0)

                                   ACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTT                                                            >  SRR4302545.6455500/1‑94 (MQ=0)

                                    CCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTG                                                           >  SRR4302545.7457801/1‑94 (MQ=0)

                                     CGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGA                                                          >  SRR4302545.5833243/1‑94 (MQ=0)

                                     CGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGA                                                          <  SRR4302545.8025379/94‑1 (MQ=0)

                                      GCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGTAATTTTTATCAGTATCCGTTGAA                                                         >  SRR4302545.7809277/1‑94 (MQ=0)

                                      CCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAA                                                         <  SRR4302545.1870326/94‑1 (MQ=0)

                                       CCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAAT                                                        <  SRR4302545.6654862/94‑1 (MQ=0)

                                       CCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAAT                                                        >  SRR4302545.6404239/1‑94 (MQ=0)

                                        CACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC                                                       >  SRR4302545.6700028/1‑94 (MQ=0)

                                        CACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC                                                       >  SRR4302545.3861106/1‑94 (MQ=0)

                                        CACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC                                                       >  SRR4302545.3484130/1‑94 (MQ=0)

                                        CACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC                                                       <  SRR4302545.783412/94‑1 (MQ=0)

                                        CACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC                                                       >  SRR4302545.8033079/1‑94 (MQ=0)

                                         CCCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCC                                                      <  SRR4302545.4523469/94‑1 (MQ=0)

                                         ACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCC                                                      <  SRR4302545.9505589/94‑1 (MQ=0)

                                         ACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCC                                                      >  SRR4302545.8525965/1‑94 (MQ=0)

                                         ACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCC                                                      <  SRR4302545.1201042/94‑1 (MQ=0)

                                          CCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCG                                                     >  SRR4302545.3697990/1‑94 (MQ=0)

                                           CGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGG                                                    <  SRR4302545.832852/94‑1 (MQ=2)

                                           CGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGTAGGGGGGATGGAATTTTTATCAGTATCCGcagaatccag                                                    >  SRR4302545.9635153/1‑84 (MQ=0)

                                             CTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTC                                                  >  SRR4302545.9031544/1‑94 (MQ=7)

                                              TATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCA                                                 <  SRR4302545.10608099/94‑1 (MQ=9)

                                              TATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCA                                                 >  SRR4302545.9825357/1‑94 (MQ=9)

                                               ATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAT                                                <  SRR4302545.2049372/94‑1 (MQ=11)

                                                TTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATA                                               >  SRR4302545.5094365/1‑94 (MQ=14)

                                                 TATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAA                                              >  SRR4302545.2621379/1‑94 (MQ=19)

                                                 TATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAA                                              <  SRR4302545.6128130/94‑1 (MQ=19)

                                                  ATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAA                                             <  SRR4302545.2512234/94‑1 (MQ=22)

                                                   TGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAT                                            >  SRR4302545.8055698/1‑94 (MQ=24)

                                                    GACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATG                                           <  SRR4302545.7456360/94‑1 (MQ=26)

                                                    GACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATG                                           >  SRR4302545.1466183/1‑94 (MQ=26)

                                                     ACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGT                                          >  SRR4302545.4549705/1‑94 (MQ=29)

                                                     ACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGT                                          <  SRR4302545.2333774/94‑1 (MQ=29)

                                                     ACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGT                                          >  SRR4302545.1504851/1‑94 (MQ=29)

                                                      CCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTA                                         <  SRR4302545.10648882/94‑1 (MQ=31)

                                                       CTGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAG                                        >  SRR4302545.8505379/1‑94 (MQ=33)

                                                        CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATTCGTTGAATCCGGTCATAAATGTAGA                                       >  SRR4302545.1402214/1‑94 (MQ=35)

                                                        CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGA                                       <  SRR4302545.6325736/94‑1 (MQ=36)

                                                        CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGA                                       <  SRR4302545.2267119/94‑1 (MQ=36)

                                                        CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGA                                       >  SRR4302545.4831057/1‑94 (MQ=36)

                                                        CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGA                                       >  SRR4302545.5120008/1‑94 (MQ=36)

                                                        CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGA                                       <  SRR4302545.9729259/94‑1 (MQ=36)

                                                         GCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGGGGGAATTTTTTTCAGTATCCGTTGAATCCGGTCATAAATGTAGAT                                      >  SRR4302545.1150174/1‑94 (MQ=34)

                                                         GCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAT                                      >  SRR4302545.5290496/1‑94 (MQ=39)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                     >  SRR4302545.10101525/1‑94 (MQ=41)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                     >  SRR4302545.5708436/1‑94 (MQ=41)

                                                          CTGCTGGGGCGGGATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                     <  SRR4302545.8394397/94‑1 (MQ=39)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                   >  SRR4302545.10834451/1‑94 (MQ=47)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                   <  SRR4302545.2406678/94‑1 (MQ=47)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                   <  SRR4302545.10296678/94‑1 (MQ=47)

                                                             CTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGC                                  <  SRR4302545.76632/94‑1 (MQ=49)

                                                              TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA                                 <  SRR4302545.5191091/94‑1 (MQ=52)

                                                              TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA                                 >  SRR4302545.8767055/1‑94 (MQ=52)

                                                              TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA                                 <  SRR4302545.5191092/94‑1 (MQ=52)

                                                              TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA                                 <  SRR4302545.2603278/94‑1 (MQ=52)

                                                                GGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAG                               <  SRR4302545.4587967/94‑1 (MQ=58)

                                                                GGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAG                               <  SRR4302545.1300750/94‑1 (MQ=58)

                                                                 GGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGG                              <  SRR4302545.5171086/94‑1 (MQ=60)

                                                                 GGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGG                              >  SRR4302545.6560341/1‑94 (MQ=60)

                                                                 GGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGG                              <  SRR4302545.8024023/94‑1 (MQ=60)

                                                                   CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT                            >  SRR4302545.1759455/1‑94 (MQ=60)

                                                                   CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT                            >  SRR4302545.2912367/1‑94 (MQ=60)

                                                                   CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT                            <  SRR4302545.5985199/94‑1 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                           <  SRR4302545.3148104/94‑1 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                           <  SRR4302545.4894648/94‑1 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTAGCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                           <  SRR4302545.5159502/94‑1 (MQ=60)

                                                                    AGTATATCACTCAGGATCCGATTAGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                           <  SRR4302545.10723339/94‑1 (MQ=60)

                                                                     GTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTG                          <  SRR4302545.4691503/94‑1 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                         <  SRR4302545.6378287/94‑1 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                         >  SRR4302545.689367/1‑94 (MQ=60)

                                                                       ATATCACTCAGGATCCGTTTGGACTGAAGGGGGGATGGAATTTTTAGCAGTATCCGTTGAATCCGGTCATAAATGTTGATCTGCAATGTTTGGT                        >  SRR4302545.9667165/1‑94 (MQ=30)

                                                                        TATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT                       <  SRR4302545.4923918/94‑1 (MQ=60)

                                                                        TATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT                       <  SRR4302545.2764695/94‑1 (MQ=60)

                                                                        TATCACTCAGGATCCGATTAGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT                       <  SRR4302545.7093890/94‑1 (MQ=60)

                                                                         ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG                      >  SRR4302545.7977181/1‑94 (MQ=60)

                                                                          TCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGA                     >  SRR4302545.3871461/1‑94 (MQ=60)

                                                                          TCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGA                     <  SRR4302545.2034816/94‑1 (MQ=60)

                                                                          TCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGA                     <  SRR4302545.8147825/94‑1 (MQ=60)

                                                                          GCACTCAGGATCCGATAGGACTGAAGGTGGAATGAAATTTTTATCAGTATCCTTCGAATCCGGTCATAAATGTAGATCCGCAATGTTTAGTTGA                     <  SRR4302545.1615784/94‑1 (MQ=50)

                                                                           CACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGAT                    >  SRR4302545.6966986/1‑94 (MQ=60)

                                                                            ACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATA                   >  SRR4302545.4718998/1‑94 (MQ=60)

                                                                             CTCAGGATCCGATTGGCCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATAT                  <  SRR4302545.3063363/94‑1 (MQ=60)

                                                                             CTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATTCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATAT                  >  SRR4302545.1678625/1‑94 (MQ=60)

                                                                             CTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATAT                  <  SRR4302545.6417651/94‑1 (MQ=60)

                                                                              TCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATA                 <  SRR4302545.3245166/94‑1 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA                <  SRR4302545.306324/94‑1 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA                >  SRR4302545.2157664/1‑94 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA                <  SRR4302545.10351438/94‑1 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA                <  SRR4302545.5434058/94‑1 (MQ=60)

                                                                                AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAA               <  SRR4302545.16251/94‑1 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT              >  SRR4302545.5390629/1‑94 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT              >  SRR4302545.1526700/1‑94 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT              <  SRR4302545.3307448/94‑1 (MQ=60)

                                                                                  GATCCGGTTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATT             <  SRR4302545.5751685/94‑1 (MQ=60)

                                                                                  GATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATT             <  SRR4302545.9172/94‑1 (MQ=60)

                                                                                  GATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATT             >  SRR4302545.6056465/1‑94 (MQ=60)

                                                                                   ATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTT            >  SRR4302545.10749369/1‑94 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT          <  SRR4302545.7270809/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT          >  SRR4302545.3751362/1‑94 (MQ=60)

                                                                                     CCGATTGGAATGAAGGGGGGATGGCATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGCTCCGCAAGGTTTGGTTGATATACATTTAT          >  SRR4302545.5901773/1‑94 (MQ=60)

                                                                                      CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATA         >  SRR4302545.4740258/1‑94 (MQ=60)

                                                                                      CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATA         <  SRR4302545.9861046/94‑1 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTTTAC        >  SRR4302545.8925584/1‑94 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC        >  SRR4302545.5312113/1‑94 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC        <  SRR4302545.10914261/94‑1 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC        >  SRR4302545.4114244/1‑94 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC        >  SRR4302545.4194248/1‑94 (MQ=60)

                                                                                        ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC       <  SRR4302545.9392373/94‑1 (MQ=60)

                                                                                        ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC       <  SRR4302545.2464167/94‑1 (MQ=60)

                                                                                          TGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCC     >  SRR4302545.9332074/1‑94 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG    <  SRR4302545.10868902/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG    <  SRR4302545.7316747/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG    <  SRR4302545.7561830/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG    >  SRR4302545.872554/1‑94 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG    <  SRR4302545.4756882/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG    <  SRR4302545.429188/94‑1 (MQ=60)

                                                                                            GACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGA   <  SRR4302545.3109768/94‑1 (MQ=60)

                                                                                             ACTGAAGGGGGGATGGAATTTTTATCAATATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA  >  SRR4302545.10620165/1‑94 (MQ=60)

GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA  >  NC_000913/3765141‑3765327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`