Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,873,025 A→G intergenic (‑238/‑97) yidW ← / → yidX regulator protein for dgo operon/putative replicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,873,0250AG99.2% 3156.3 / 3.7 913intergenic (‑238/‑97)yidW/yidXregulator protein for dgo operon/putative replicase
Reads supporting (aligned to +/- strand):  ref base A (5/2);  new base G (383/522);  total (388/525)
Fisher's exact test for biased strand distribution p-value = 1.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.42e-01

Only 100 of 933 total aligned reads displayed.

TCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTG  >  NC_000913/3872934‑3873115
                                                                                           |                                                                                          
tCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGtgtg                                                                                          >  2:1579621/1‑94 (MQ=255)
 cacaAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGtgtgt                                                                                         >  1:7850811/1‑93 (MQ=255)
  acaAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCt                                                                                        >  2:3456629/1‑94 (MQ=255)
    aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCttt                                                                                      <  1:4784738/94‑1 (MQ=255)
    aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCttt                                                                                      <  1:1569468/94‑1 (MQ=255)
    aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCttt                                                                                      >  1:9933565/1‑94 (MQ=255)
       aaGAACAAGGCAAAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCaa                                                                                   <  1:3878133/94‑1 (MQ=255)
        aGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAAc                                                                                  >  1:10385135/1‑94 (MQ=255)
         gAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACg                                                                                 >  2:3976183/1‑94 (MQ=255)
          aaCAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACgg                                                                                >  2:9732886/1‑94 (MQ=255)
            cAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCt                                                                              <  1:1445145/94‑1 (MQ=255)
             aaTGCATAAAAAAATGACCTGCGTCCGGCAAAAATCTGAAAAGGGATATCAGGCCCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCtt                                                                             <  1:5778255/94‑1 (MQ=255)
             aaTGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCtt                                                                             >  1:3411615/1‑94 (MQ=255)
             aaTGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCtt                                                                             <  1:3635078/94‑1 (MQ=255)
              aTGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTa                                                                            <  1:1711912/94‑1 (MQ=255)
               tGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAg                                                                           >  2:1808511/1‑94 (MQ=255)
                gCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAgt                                                                          >  2:5765137/1‑93 (MQ=255)
                gCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGc                                                                          <  2:4685781/94‑1 (MQ=255)
                gCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGc                                                                          >  1:6318177/1‑94 (MQ=255)
                  aTAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTa                                                                        >  1:2081378/1‑94 (MQ=255)
                   tAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTAc                                                                       <  2:2411406/94‑1 (MQ=255)
                    aaaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACt                                                                      <  1:6448383/94‑1 (MQ=255)
                    aaaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACt                                                                      <  2:7851424/94‑1 (MQ=255)
                     aaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTc                                                                     <  2:4503070/94‑1 (MQ=255)
                     aaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTc                                                                     >  1:9067301/1‑94 (MQ=255)
                     aaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTc                                                                     <  2:983727/94‑1 (MQ=255)
                        aaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGtt                                                                  <  2:5366759/94‑1 (MQ=255)
                          aTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTa                                                                >  1:2750321/1‑94 (MQ=255)
                          aTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTa                                                                <  2:4927852/94‑1 (MQ=255)
                          aTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTa                                                                <  1:7492668/94‑1 (MQ=255)
                          aTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTa                                                                <  1:4983305/94‑1 (MQ=255)
                          aTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTa                                                                <  2:9544893/94‑1 (MQ=255)
                           tGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTaa                                                               >  1:7295836/1‑94 (MQ=255)
                           tGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTaa                                                               >  1:6585856/1‑94 (MQ=255)
                            gACGTGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTaaa                                                              <  2:10301923/94‑1 (MQ=255)
                             aCATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCACCGGCTTAGCTACTCGTTTAAAg                                                             <  1:6761993/94‑1 (MQ=255)
                             aCATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAg                                                             >  1:556121/1‑94 (MQ=255)
                              cATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAgg                                                            >  1:8059139/1‑94 (MQ=255)
                               aTGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGa                                                           <  1:10255703/94‑1 (MQ=255)
                               aTGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGa                                                           <  2:827118/94‑1 (MQ=255)
                                tGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGAt                                                          <  1:5948320/94‑1 (MQ=255)
                                  cGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTa                                                        >  2:6450929/1‑94 (MQ=255)
                                  cGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTa                                                        >  2:7238773/1‑94 (MQ=255)
                                  cGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTa                                                        <  1:5336896/94‑1 (MQ=255)
                                   gTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTaa                                                       >  1:2607516/1‑94 (MQ=255)
                                   gTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTaa                                                       <  2:6796500/94‑1 (MQ=255)
                                   gTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTaa                                                       >  1:3045311/1‑94 (MQ=255)
                                   gTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTaa                                                       >  2:6228282/1‑94 (MQ=255)
                                   ctCGGGCAGAAATGTGAAAAGGAATATCAGTCCATAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTaa                                                       <  2:5170622/93‑1 (MQ=255)
                                    tCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAAt                                                      <  1:4279934/94‑1 (MQ=255)
                                     cGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATc                                                     <  1:10533837/94‑1 (MQ=255)
                                       ggCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCAt                                                   <  1:7009895/94‑1 (MQ=255)
                                        gCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATg                                                  >  2:2317471/1‑94 (MQ=255)
                                          aGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGaa                                                >  2:7711449/1‑94 (MQ=255)
                                          aGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGaa                                                <  1:5106558/94‑1 (MQ=255)
                                            aaaTCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGt                                              >  1:521166/1‑94 (MQ=255)
                                            aaaTCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGt                                              <  2:6653390/94‑1 (MQ=255)
                                             aaTCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGtt                                             <  1:9256458/94‑1 (MQ=255)
                                               tCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGa                                           >  1:1934010/1‑94 (MQ=255)
                                                cTGAGAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGat                                          >  1:8807062/1‑93 (MQ=255)
                                                cTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGaa                                          <  2:2970367/94‑1 (MQ=255)
                                                  taaaaGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAtt                                        <  2:3671748/93‑1 (MQ=255)
                                                  gAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAtt                                        <  1:3261043/94‑1 (MQ=255)
                                                  gAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAtt                                        <  2:10599413/94‑1 (MQ=255)
                                                    aaaGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAtttt                                      >  2:1176062/1‑94 (MQ=255)
                                                    aaaGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAtttt                                      <  2:806567/94‑1 (MQ=255)
                                                       gggATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAg                                   <  2:8475626/94‑1 (MQ=255)
                                                       gggATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAg                                   <  2:7584893/94‑1 (MQ=255)
                                                       gggATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAg                                   <  1:8529937/94‑1 (MQ=255)
                                                        ggATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAgg                                  <  2:4210197/94‑1 (MQ=255)
                                                          atatCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGa                                <  1:8655451/94‑1 (MQ=255)
                                                          atatCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGa                                <  2:10068044/94‑1 (MQ=255)
                                                            atCAGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGAtt                              <  1:2363343/94‑1 (MQ=255)
                                                              cAGGCGCTAAACAGGAGGGAAAGAAGAGTTTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGAtttt                            <  2:4069630/94‑1 (MQ=255)
                                                               aGGCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGAGAttttt                           >  2:6027203/1‑94 (MQ=255)
                                                                ggCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGAtttttt                          <  1:8351934/94‑1 (MQ=255)
                                                                ggCGCTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGAtttttt                          >  1:2201832/1‑94 (MQ=255)
                                                                   gcTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAg                       <  2:2716821/94‑1 (MQ=255)
                                                                   gcTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAg                       >  1:4465946/1‑94 (MQ=255)
                                                                    cTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAgg                      >  2:2137592/1‑94 (MQ=255)
                                                                    cTAAACAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAgg                      >  2:2057112/1‑94 (MQ=255)
                                                                       aaCAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTg                   <  2:7055891/94‑1 (MQ=255)
                                                                         cAGGAGGGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGcc                 <  1:9725157/94‑1 (MQ=255)
                                                                         aaggaggGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGcc                 <  2:8936096/93‑1 (MQ=255)
                                                                          aggaggGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCg                >  1:10025875/1‑94 (MQ=255)
                                                                           ggaggGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCgg               <  1:4115417/94‑1 (MQ=255)
                                                                           ggaggGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCgg               <  2:1353816/94‑1 (MQ=255)
                                                                            gaggGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGt              >  2:2573044/1‑94 (MQ=255)
                                                                             aggGAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGtt             >  2:747233/1‑94 (MQ=255)
                                                                              gggAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGttt            <  2:5904511/94‑1 (MQ=255)
                                                                               ggAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTa           >  2:9259504/1‑94 (MQ=255)
                                                                                gAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTAt          <  2:3191781/94‑1 (MQ=255)
                                                                                gAAAGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTAt          <  1:6136466/94‑1 (MQ=255)
                                                                                 aaaGAAGAGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTAtt         >  1:4665554/1‑94 (MQ=255)
                                                                                   agaagaGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTcc       >  2:8723524/1‑94 (MQ=255)
                                                                                    gaagaGTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTccc      <  1:7691567/94‑1 (MQ=255)
                                                                                      agagTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCAc    >  2:6884312/1‑94 (MQ=255)
                                                                                      agagTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCAc    <  2:3800161/94‑1 (MQ=255)
                                                                                       gagTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACt   <  1:9481067/94‑1 (MQ=255)
                                                                                        agTGTGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTg  >  1:1205642/1‑94 (MQ=255)
                                                                                           |                                                                                          
TCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTG  >  NC_000913/3872934‑3873115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 519 total aligned reads displayed.
AAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAAT  >  NC_000913/3873534‑3873720
                                                                                             |                                                                                             
  AATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATG                                                                                            >  SRR4302545.5722945/1‑94 (MQ=60)
   ATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGG                                                                                           >  SRR4302545.3644204/1‑94 (MQ=60)
    TAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGT                                                                                          <  SRR4302545.10056299/94‑1 (MQ=60)
     AAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTG                                                                                         <  SRR4302545.10094313/94‑1 (MQ=60)
     AAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTG                                                                                         >  SRR4302545.8072609/1‑94 (MQ=60)
     AAAAAAAAGGAGTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCGCCCAGAGGCATTCC‑GGATGGTG                                                                                         <  SRR4302545.2009385/94‑1 (MQ=60)
      AAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGT                                                                                        <  SRR4302545.27904/94‑1 (MQ=60)
      AAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGT                                                                                        >  SRR4302545.2138976/1‑94 (MQ=60)
      AAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGT                                                                                        <  SRR4302545.8433927/94‑1 (MQ=60)
      AAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGT                                                                                        <  SRR4302545.3971714/94‑1 (MQ=60)
       AAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTT                                                                                       >  SRR4302545.10231083/1‑94 (MQ=60)
       AAACATGAATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTT                                                                                       >  SRR4302545.10581432/1‑94 (MQ=60)
        AACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTT                                                                                      >  SRR4302545.9762453/1‑94 (MQ=60)
        AACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTT                                                                                      >  SRR4302545.7784184/1‑94 (MQ=60)
        AACATGGAGTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAAGACTATTCGCCCAGAGGCATTCC‑GGATGGTGTTT                                                                                      <  SRR4302545.6769829/94‑1 (MQ=60)
         ACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTC                                                                                     <  SRR4302545.1117864/94‑1 (MQ=60)
         ACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTC                                                                                     <  SRR4302545.119984/94‑1 (MQ=60)
         ACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTC                                                                                     >  SRR4302545.1291487/1‑94 (MQ=60)
          CATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCC                                                                                    >  SRR4302545.2632536/1‑94 (MQ=60)
          CATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCC                                                                                    >  SRR4302545.8397388/1‑94 (MQ=60)
          CATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCC                                                                                    >  SRR4302545.8363448/1‑94 (MQ=60)
          CATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCC                                                                                    >  SRR4302545.3372840/1‑94 (MQ=60)
          CATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCC                                                                                    <  SRR4302545.1353343/94‑1 (MQ=60)
           ATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCG                                                                                   <  SRR4302545.10342646/94‑1 (MQ=60)
           ATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCG                                                                                   >  SRR4302545.6623248/1‑94 (MQ=60)
           ATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCG                                                                                   >  SRR4302545.7638947/1‑94 (MQ=60)
            TGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGC                                                                                  >  SRR4302545.7407369/1‑94 (MQ=60)
            TGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGC                                                                                  <  SRR4302545.968367/94‑1 (MQ=60)
            TGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGC                                                                                  >  SRR4302545.8682162/1‑94 (MQ=60)
             GGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCA                                                                                 <  SRR4302545.9606273/94‑1 (MQ=60)
              GATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAG                                                                                >  SRR4302545.283300/1‑94 (MQ=60)
              GATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTACCCAG                                                                                >  SRR4302545.1935891/1‑94 (MQ=60)
               ATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGC                                                                               >  SRR4302545.3808147/1‑94 (MQ=60)
                 TACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCAT                                                                             >  SRR4302545.7547642/1‑94 (MQ=60)
                 TACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCAT                                                                             <  SRR4302545.2285752/94‑1 (MQ=60)
                 TACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCAT                                                                             <  SRR4302545.7118264/94‑1 (MQ=60)
                   CTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTA                                                                           >  SRR4302545.6718680/1‑94 (MQ=60)
                   CTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTA                                                                           >  SRR4302545.4744947/1‑94 (MQ=60)
                   CTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTA                                                                           >  SRR4302545.5061224/1‑94 (MQ=60)
                   CTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTA                                                                           <  SRR4302545.107241/94‑1 (MQ=60)
                    TCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTAC                                                                          >  SRR4302545.2692007/1‑94 (MQ=60)
                     CAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACT                                                                         <  SRR4302545.1089902/94‑1 (MQ=60)
                     CAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACT                                                                         >  SRR4302545.4567278/1‑94 (MQ=60)
                      AAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTG                                                                        >  SRR4302545.2362391/1‑94 (MQ=60)
                       AAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGC                                                                       <  SRR4302545.3025676/94‑1 (MQ=60)
                       AAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGC                                                                       >  SRR4302545.6423517/1‑94 (MQ=60)
                       AAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGC                                                                       >  SRR4302545.8225650/1‑94 (MQ=60)
                       AAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGC                                                                       >  SRR4302545.7147412/1‑94 (MQ=60)
                       AAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGC                                                                       >  SRR4302545.10204572/1‑94 (MQ=60)
                        AGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATAGTGTTTCCGCAGCATTACTGCC                                                                      <  SRR4302545.933379/94‑1 (MQ=60)
                         GGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCA                                                                     <  SRR4302545.9954752/94‑1 (MQ=60)
                          GTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAG                                                                    >  SRR4302545.10866726/1‑94 (MQ=60)
                          GTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAG                                                                    <  SRR4302545.1480558/94‑1 (MQ=60)
                           TGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGT                                                                   >  SRR4302545.5787848/1‑94 (MQ=60)
                            GATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTG                                                                  >  SRR4302545.7380300/1‑94 (MQ=60)
                            GATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTG                                                                  <  SRR4302545.2426684/94‑1 (MQ=60)
                            GATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTG                                                                  >  SRR4302545.3004963/1‑94 (MQ=60)
                             ATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGA                                                                 <  SRR4302545.9983715/94‑1 (MQ=60)
                              TGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCTGCATGACTGCCAGTGAC                                                                >  SRR4302545.9673484/1‑94 (MQ=60)
                               GGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACT                                                               <  SRR4302545.8277828/94‑1 (MQ=60)
                                 CGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGT                                                             >  SRR4302545.6465711/1‑94 (MQ=60)
                                 CGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGT                                                             <  SRR4302545.552762/94‑1 (MQ=60)
                                  GTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTT                                                            >  SRR4302545.10127174/1‑94 (MQ=60)
                                  GTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTT                                                            >  SRR4302545.3314743/1‑94 (MQ=60)
                                  GTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTT                                                            >  SRR4302545.7476348/1‑94 (MQ=60)
                                  GTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTT                                                            >  SRR4302545.8734104/1‑94 (MQ=60)
                                   TTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTA                                                           <  SRR4302545.3287612/94‑1 (MQ=60)
                                   TTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTA                                                           <  SRR4302545.8968698/94‑1 (MQ=60)
                                   TTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTA                                                           <  SRR4302545.9399681/94‑1 (MQ=60)
                                    TCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTAC                                                          <  SRR4302545.1574296/94‑1 (MQ=60)
                                     CTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACG                                                         >  SRR4302545.6734110/1‑94 (MQ=60)
                                      TACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGC                                                        >  SRR4302545.2084493/1‑94 (MQ=60)
                                      TACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGC                                                        <  SRR4302545.7768421/94‑1 (MQ=60)
                                      TACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGC                                                        <  SRR4302545.6972930/94‑1 (MQ=60)
                                       TCCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCT                                                       <  SRR4302545.2424194/94‑1 (MQ=60)
                                       ACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCT                                                       >  SRR4302545.9358446/1‑94 (MQ=60)
                                        CCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTG                                                      >  SRR4302545.4955971/1‑94 (MQ=60)
                                         CATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GTATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGG                                                     <  SRR4302545.7296483/94‑1 (MQ=60)
                                         CATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGG                                                     <  SRR4302545.870386/94‑1 (MQ=60)
                                         CATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGG                                                     <  SRR4302545.4600624/94‑1 (MQ=60)
                                         CATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGG                                                     >  SRR4302545.9321481/1‑94 (MQ=60)
                                         CATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGG                                                     >  SRR4302545.6999606/1‑94 (MQ=60)
                                          ATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGA                                                    <  SRR4302545.9704351/94‑1 (MQ=60)
                                           TCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAC                                                   <  SRR4302545.7129242/94‑1 (MQ=60)
                                           TCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAC                                                   <  SRR4302545.576852/94‑1 (MQ=60)
                                           TCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAC                                                   <  SRR4302545.10671697/94‑1 (MQ=60)
                                            CCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACA                                                  <  SRR4302545.2928791/94‑1 (MQ=60)
                                            CCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACA                                                  <  SRR4302545.7954083/94‑1 (MQ=60)
                                            CCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACA                                                  <  SRR4302545.10420283/94‑1 (MQ=60)
                                            CCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACA                                                  >  SRR4302545.7755634/1‑94 (MQ=60)
                                             CATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACAT                                                 >  SRR4302545.10536654/1‑94 (MQ=60)
                                              ATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GTATGGTGTTTCCGCAGCATTACTGCCAGTGACAGTTACGCTGGACATC                                                <  SRR4302545.2668038/94‑1 (MQ=60)
                                              ATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATC                                                >  SRR4302545.8941898/1‑94 (MQ=60)
                                              ATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATC                                                >  SRR4302545.7694734/1‑94 (MQ=60)
                                               TTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCA                                               <  SRR4302545.8515286/94‑1 (MQ=60)
                                               TTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCA                                               <  SRR4302545.5043461/94‑1 (MQ=60)
                                               TTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCA                                               <  SRR4302545.9242243/94‑1 (MQ=60)
                                                TTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCAT                                              >  SRR4302545.10847250/1‑94 (MQ=60)
                                                TTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCAT                                              <  SRR4302545.6512402/94‑1 (MQ=60)
                                                TTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCAT                                              >  SRR4302545.8855957/1‑94 (MQ=60)
                                                 TAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATT                                             >  SRR4302545.2998008/1‑94 (MQ=60)
                                                 TAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATT                                             <  SRR4302545.2314882/94‑1 (MQ=60)
                                                     GTGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTG                                         <  SRR4302545.1816607/94‑1 (MQ=60)
                                                      TGCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGC                                        <  SRR4302545.2216183/94‑1 (MQ=60)
                                                       GCGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCA                                       <  SRR4302545.4152562/94‑1 (MQ=60)
                                                        CGATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCAC                                      >  SRR4302545.1523196/1‑94 (MQ=60)
                                                         GATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACC                                     <  SRR4302545.1739658/94‑1 (MQ=60)
                                                         GATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACC                                     >  SRR4302545.7081137/1‑94 (MQ=60)
                                                         GATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACC                                     <  SRR4302545.64789/94‑1 (MQ=60)
                                                          ATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCG                                    <  SRR4302545.7245573/94‑1 (MQ=60)
                                                          ATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCG                                    <  SRR4302545.1046829/94‑1 (MQ=60)
                                                          ATTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCG                                    >  SRR4302545.2922479/1‑94 (MQ=60)
                                                           TTTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGC                                   >  SRR4302545.908215/1‑94 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  <  SRR4302545.9516216/94‑1 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  <  SRR4302545.8868254/94‑1 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  <  SRR4302545.10397067/94‑1 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  >  SRR4302545.10513811/1‑94 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  >  SRR4302545.6928688/1‑94 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  <  SRR4302545.2566946/94‑1 (MQ=60)
                                                            TTTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCT                                  <  SRR4302545.6052806/94‑1 (MQ=60)
                                                            TTGATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCCCCGCT                                  <  SRR4302545.3039441/94‑1 (MQ=60)
                                                             TTATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTG                                 >  SRR4302545.8178654/1‑94 (MQ=60)
                                                              TATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGC                                >  SRR4302545.4415454/1‑94 (MQ=60)
                                                              TATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGC                                <  SRR4302545.10123594/94‑1 (MQ=60)
                                                               ATGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCA                               >  SRR4302545.3226092/1‑94 (MQ=60)
                                                                TGAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAA                              <  SRR4302545.3748008/94‑1 (MQ=60)
                                                                 GAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAAT                             >  SRR4302545.7471133/1‑94 (MQ=60)
                                                                 GAATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAAT                             <  SRR4302545.5832328/94‑1 (MQ=60)
                                                                 GAATACTATTCACCCAGAGACATTCC‑GGATGGAGTGTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAAT                             <  SRR4302545.4852868/94‑1 (MQ=60)
                                                                  AATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATT                            >  SRR4302545.5475510/1‑94 (MQ=60)
                                                                  AATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATT                            >  SRR4302545.1775120/1‑94 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           >  SRR4302545.10791213/1‑94 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           <  SRR4302545.2448411/94‑1 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           >  SRR4302545.2726180/1‑94 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           <  SRR4302545.4928265/94‑1 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           <  SRR4302545.1687019/94‑1 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           >  SRR4302545.5683810/1‑94 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           <  SRR4302545.5893316/94‑1 (MQ=60)
                                                                   ATACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTT                           <  SRR4302545.4715803/94‑1 (MQ=60)
                                                                    TACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTC                          >  SRR4302545.6011577/1‑94 (MQ=60)
                                                                     ACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCT                         <  SRR4302545.1977374/94‑1 (MQ=60)
                                                                     ACTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCT                         <  SRR4302545.6488172/94‑1 (MQ=60)
                                                                      CTATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTG                        <  SRR4302545.5566640/94‑1 (MQ=60)
                                                                       TATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGG                       >  SRR4302545.6736580/1‑94 (MQ=60)
                                                                       TATCCCCCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGG                       <  SRR4302545.8196342/94‑1 (MQ=60)
                                                                        ATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGT                      >  SRR4302545.7431441/1‑94 (MQ=60)
                                                                        ATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGT                      >  SRR4302545.3791900/1‑94 (MQ=60)
                                                                        ATTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGT                      <  SRR4302545.5284183/94‑1 (MQ=60)
                                                                         TTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTT                     >  SRR4302545.4088678/1‑94 (MQ=60)
                                                                         TTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTT                     <  SRR4302545.4666331/94‑1 (MQ=60)
                                                                         TTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTT                     >  SRR4302545.7609913/1‑94 (MQ=60)
                                                                         TTCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTT                     >  SRR4302545.1693703/1‑94 (MQ=60)
                                                                          TCACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTG                    >  SRR4302545.4478925/1‑94 (MQ=60)
                                                                           CACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGT                   >  SRR4302545.2984758/1‑94 (MQ=60)
                                                                           CACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGT                   <  SRR4302545.7593093/94‑1 (MQ=60)
                                                                           CACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGT                   >  SRR4302545.7347659/1‑94 (MQ=60)
                                                                            ACCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTA                  >  SRR4302545.724064/1‑94 (MQ=60)
                                                                             CCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTAT                 >  SRR4302545.9409372/1‑94 (MQ=60)
                                                                             CCCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTAT                 >  SRR4302545.3355907/1‑94 (MQ=60)
                                                                              CCAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATA                >  SRR4302545.6279132/1‑94 (MQ=60)
                                                                               CAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATAT               <  SRR4302545.515528/94‑1 (MQ=60)
                                                                               CAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATAT               >  SRR4302545.5338134/1‑94 (MQ=60)
                                                                               CAGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACAGCTGCAATTTCTGGTTGTATAT               >  SRR4302545.8612430/1‑94 (MQ=60)
                                                                                AGAGGCATTCC‑GGATGGTGTTTCCGCGGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATG              <  SRR4302545.9925672/94‑1 (MQ=60)
                                                                                AGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATG              >  SRR4302545.6244216/1‑94 (MQ=60)
                                                                                AGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATG              <  SRR4302545.6382068/94‑1 (MQ=60)
                                                                                AGAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATG              >  SRR4302545.5269086/1‑94 (MQ=60)
                                                                                 GAGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGC             >  SRR4302545.4102424/1‑94 (MQ=60)
                                                                                 GAGGCATTCC‑GGATGGTGTTTCCACAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGC             <  SRR4302545.7088711/94‑1 (MQ=60)
                                                                                  AGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCA            <  SRR4302545.4655/94‑1 (MQ=60)
                                                                                  AGGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCA            <  SRR4302545.784128/94‑1 (MQ=60)
                                                                                   GGCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTGCTGGTTGTATATGCAG           >  SRR4302545.9814929/1‑94 (MQ=60)
                                                                                    GCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGT          >  SRR4302545.4719611/1‑94 (MQ=60)
                                                                                    GCATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGT          <  SRR4302545.7192845/94‑1 (MQ=60)
                                                                                     CATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGCCATCATTCCTGCACCGCGGCCATTTCTAGTTGTATATGCcgga         >  SRR4302545.7367474/1‑90 (MQ=60)
                                                                                     CATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTA         <  SRR4302545.6968122/94‑1 (MQ=60)
                                                                                     CATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTA         >  SRR4302545.6156186/1‑94 (MQ=60)
                                                                                     CATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTA         >  SRR4302545.476894/1‑94 (MQ=60)
                                                                                      ATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAA        >  SRR4302545.3986668/1‑94 (MQ=60)
                                                                                      ATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAA        >  SRR4302545.10000799/1‑94 (MQ=60)
                                                                                      ATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAA        >  SRR4302545.5420374/1‑94 (MQ=60)
                                                                                      ATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAA        >  SRR4302545.1619662/1‑94 (MQ=60)
                                                                                      ATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAA        >  SRR4302545.8018329/1‑94 (MQ=60)
                                                                                      ATTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAA        >  SRR4302545.8171949/1‑94 (MQ=60)
                                                                                       TTCC‑GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAA       >  SRR4302545.8136037/1‑94 (MQ=60)
                                                                                          CCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACC     >  SRR4302545.6824877/1‑94 (MQ=60)
                                                                                          CCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACC     <  SRR4302545.9798272/94‑1 (MQ=60)
                                                                                           CGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCA    >  SRR4302545.4241124/1‑94 (MQ=60)
                                                                                           CGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCA    <  SRR4302545.3666245/94‑1 (MQ=60)
                                                                                           CGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCA    >  SRR4302545.10609319/1‑94 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAA   >  SRR4302545.9182765/1‑94 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAA   >  SRR4302545.3519274/1‑94 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAA   >  SRR4302545.4454756/1‑94 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAA   >  SRR4302545.4331138/1‑94 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAA   >  SRR4302545.9212760/1‑94 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAA   <  SRR4302545.9139789/94‑1 (MQ=60)
                                                                                            GGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGGAAACCAA   >  SRR4302545.5356654/1‑94 (MQ=60)
                                                                                             GATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAAT  >  SRR4302545.2875340/1‑94 (MQ=60)
                                                                                             GATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAAT  >  SRR4302545.2472140/1‑94 (MQ=60)
                                                                                             GATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAAT  <  SRR4302545.1835522/94‑1 (MQ=60)
                                                                                             |                                                                                             
AAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAAT  >  NC_000913/3873534‑3873720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑