Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,919,891 G→A R64C (CGT→TGT)  atpI ← membrane‑bound ATP synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,919,8910GA99.4% 2703.4 / ‑3.5 722R64C (CGT→TGT) atpImembrane‑bound ATP synthase
Reads supporting (aligned to +/- strand):  ref base G (2/2);  new base A (359/355);  total (362/360)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01

Only 100 of 733 total aligned reads displayed.

AGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGA  >  NC_000913/3919800‑3919983
                                                                                           |                                                                                            
aGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACAcc                                                                                            >  2:8479033/1‑94 (MQ=255)
aGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACAcc                                                                                            >  1:5178873/1‑94 (MQ=255)
aGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACAcc                                                                                            <  1:4087235/94‑1 (MQ=255)
 gTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCCCCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCa                                                                                           <  2:306151/94‑1 (MQ=255)
  tAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAg                                                                                          <  2:5913025/94‑1 (MQ=255)
    acacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGc                                                                                        <  2:864482/94‑1 (MQ=255)
    acacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGc                                                                                        <  2:1471302/94‑1 (MQ=255)
     cacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCa                                                                                       >  1:3077103/1‑94 (MQ=255)
       ccAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCaaa                                                                                     >  2:1343793/1‑94 (MQ=255)
       ccAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCaaa                                                                                     >  2:3191484/1‑94 (MQ=255)
        cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAat                                                                                    <  2:3338281/94‑1 (MQ=255)
         aaCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACCCCAGGCACata                                                                                   >  2:7800961/1‑94 (MQ=255)
         aaCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAata                                                                                   <  2:7695140/94‑1 (MQ=255)
         aaCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAata                                                                                   <  2:2092220/94‑1 (MQ=255)
          aCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAatat                                                                                  <  1:3219170/94‑1 (MQ=255)
          aCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAatat                                                                                  <  1:6047791/94‑1 (MQ=255)
           cATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATc                                                                                 <  1:5665895/94‑1 (MQ=255)
           cATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATc                                                                                 >  2:1027657/1‑94 (MQ=255)
           cATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATc                                                                                 >  1:7674119/1‑94 (MQ=255)
           cATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATc                                                                                 <  1:3916615/94‑1 (MQ=255)
            aTCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCa                                                                                >  1:3726099/1‑94 (MQ=255)
            aTCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCa                                                                                <  1:1333196/94‑1 (MQ=255)
            aTCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCa                                                                                >  1:1660309/1‑94 (MQ=255)
               gCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATaa                                                                             <  1:1489334/94‑1 (MQ=255)
                 cAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATaaaa                                                                           >  1:3386138/1‑93 (MQ=255)
                 cAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAc                                                                           >  1:431333/1‑94 (MQ=255)
                  aGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACa                                                                          <  2:2655943/94‑1 (MQ=255)
                      cTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAAc                                                                      <  2:2332497/94‑1 (MQ=255)
                      cTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAAc                                                                      >  1:5335597/1‑94 (MQ=255)
                       tttGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACg                                                                     <  1:9820136/94‑1 (MQ=255)
                        ttGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGt                                                                    <  2:1801409/94‑1 (MQ=255)
                         tGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGtt                                                                   <  1:5871099/94‑1 (MQ=255)
                         tGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGtt                                                                   >  1:6196078/1‑94 (MQ=255)
                           aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAg                                                                 <  1:5407484/94‑1 (MQ=255)
                           aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAg                                                                 <  2:10500302/94‑1 (MQ=255)
                           aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAg                                                                 >  1:3482876/1‑94 (MQ=255)
                             aGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGc                                                               <  2:5082607/94‑1 (MQ=255)
                             aGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGc                                                               >  1:8565856/1‑94 (MQ=255)
                               cTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAg                                                             >  1:1906366/1‑94 (MQ=255)
                                 tCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGaa                                                           <  2:5687589/94‑1 (MQ=255)
                                   gCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAg                                                         >  2:8771636/1‑94 (MQ=255)
                                        aTGCAAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGc                                                    >  1:10470318/1‑94 (MQ=255)
                                         tGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGcc                                                   >  1:6661723/1‑94 (MQ=255)
                                         tGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGcc                                                   <  1:10062551/94‑1 (MQ=255)
                                          gCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGccg                                                  >  2:2201761/1‑93 (MQ=255)
                                          gCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCa                                                  >  1:2671248/1‑94 (MQ=255)
                                           cGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg                                                 <  1:8007769/94‑1 (MQ=255)
                                           cGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg                                                 <  2:9341166/94‑1 (MQ=255)
                                            gAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAgg                                                <  1:1067468/94‑1 (MQ=255)
                                            gAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAgg                                                >  2:275349/1‑94 (MQ=255)
                                            gAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAgg                                                <  2:4307489/94‑1 (MQ=255)
                                              aTGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGcc                                              >  2:1149832/1‑94 (MQ=255)
                                              aTGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGcc                                              >  1:6485937/1‑94 (MQ=255)
                                               tGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccc                                             >  1:7368352/1‑94 (MQ=255)
                                               tGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccc                                             >  1:9496519/1‑94 (MQ=255)
                                                  ccAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCg                                          <  2:740346/94‑1 (MQ=255)
                                                    aGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCt                                        <  1:932343/94‑1 (MQ=255)
                                                     ggCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCtt                                       >  2:7321292/1‑94 (MQ=255)
                                                       ccACCCGGCCTTTCGCTGGTGTATGCGCATGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAt                                     <  1:9636642/94‑1 (MQ=255)
                                                        cACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                    <  2:5583932/94‑1 (MQ=255)
                                                        cACCCGGCCTTTCGCTGGTGTATGCGACTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                    <  2:3725040/94‑1 (MQ=255)
                                                         ccccGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTg                                   <  1:2145362/93‑1 (MQ=255)
                                                         aCCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTg                                   <  2:6977145/94‑1 (MQ=255)
                                                              gCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCagag                              >  1:10249561/1‑94 (MQ=255)
                                                              gCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCagag                              <  2:474044/94‑1 (MQ=255)
                                                              gCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCagag                              >  1:6832195/1‑94 (MQ=255)
                                                              gCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTACCAGGCCCCCGCTTATTGCagag                              <  1:2496782/94‑1 (MQ=255)
                                                               ccTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga                             >  2:957030/1‑94 (MQ=255)
                                                               ccTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga                             >  1:4595729/1‑94 (MQ=255)
                                                                cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAc                            >  1:9136743/1‑94 (MQ=255)
                                                                cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAc                            <  1:777969/94‑1 (MQ=255)
                                                                cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAc                            <  1:7213414/94‑1 (MQ=255)
                                                                cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAc                            <  2:908578/94‑1 (MQ=255)
                                                                cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAc                            <  2:4947331/94‑1 (MQ=255)
                                                                cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAAGCCCCCGCTTATTGCAGAGAc                            <  2:158198/94‑1 (MQ=255)
                                                                    cGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc                        >  2:4552491/1‑94 (MQ=255)
                                                                      cTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCa                      >  2:7539311/1‑94 (MQ=255)
                                                                       tGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAg                     >  2:6630991/1‑94 (MQ=255)
                                                                       cggTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAg                     <  1:2863680/93‑1 (MQ=255)
                                                                         gtgtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGaa                   <  1:8327707/94‑1 (MQ=255)
                                                                         gtgtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGaa                   <  2:2462420/94‑1 (MQ=255)
                                                                           gtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAgg                 >  2:10096654/1‑94 (MQ=255)
                                                                           gtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAgg                 >  2:622936/1‑94 (MQ=255)
                                                                           gtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCACTTATTGCAGAGACGCCCCAGAAgg                 <  2:6455045/94‑1 (MQ=255)
                                                                            tATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAggg                <  1:4036037/94‑1 (MQ=255)
                                                                              tGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGt              <  2:8004862/94‑1 (MQ=255)
                                                                              tGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGt              >  2:9862318/1‑94 (MQ=255)
                                                                               gcgcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTc             <  2:3465824/94‑1 (MQ=255)
                                                                               gcgcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTc             >  1:4980477/1‑94 (MQ=255)
                                                                                cgcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCt            <  2:8364441/94‑1 (MQ=255)
                                                                                cgcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCt            <  1:8192050/94‑1 (MQ=255)
                                                                                cgcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCt            <  2:6826813/94‑1 (MQ=255)
                                                                                 gcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCtt           >  1:7009772/1‑94 (MQ=255)
                                                                                 gcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCtt           <  1:4804866/94‑1 (MQ=255)
                                                                                  ccTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCttt          >  2:3863006/1‑94 (MQ=255)
                                                                                   cTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTg         >  2:7185489/1‑94 (MQ=255)
                                                                                    tGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGa        >  2:4151915/1‑94 (MQ=255)
                                                                                     ggTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAg       <  2:522783/94‑1 (MQ=255)
                                                                                     ggTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAg       <  1:7894424/94‑1 (MQ=255)
                                                                                       tGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGc     >  1:890885/1‑94 (MQ=255)
                                                                                           |                                                                                            
AGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGA  >  NC_000913/3919800‑3919983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 409 total aligned reads displayed.
ATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGCGGC  >  NC_000913/3926251‑3926437
                                                                                             |                                                                                             
ATCCCCAAAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCA                                                                                               <  SRR4302545.10810676/94‑1 (MQ=60)
 TCCGCAGAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTCCCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCAT                                                                                              <  SRR4302545.8395756/94‑1 (MQ=60)
 TCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCAT                                                                                              >  SRR4302545.275337/1‑94 (MQ=60)
  CCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATG                                                                                             >  SRR4302545.4463043/1‑94 (MQ=60)
  CCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATG                                                                                             >  SRR4302545.2969910/1‑94 (MQ=60)
  CCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATG                                                                                             <  SRR4302545.2949370/94‑1 (MQ=60)
   CACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGC                                                                                            >  SRR4302545.6346311/1‑94 (MQ=60)
   CACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGC                                                                                            >  SRR4302545.8862361/1‑94 (MQ=60)
    ACACGGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCA                                                                                           >  SRR4302545.9098719/1‑94 (MQ=60)
    ACACAGACGATAACCGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCCATCACTTTTTCACGCCACGACTCACCATGCA                                                                                           <  SRR4302545.7299506/94‑1 (MQ=60)
     CACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAG                                                                                          >  SRR4302545.10259720/1‑94 (MQ=60)
     CACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAG                                                                                          >  SRR4302545.3826568/1‑94 (MQ=60)
     CACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAG                                                                                          <  SRR4302545.303999/94‑1 (MQ=60)
     CACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAG                                                                                          >  SRR4302545.10513295/1‑94 (MQ=60)
      ACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGG                                                                                         <  SRR4302545.6838392/94‑1 (MQ=60)
       CAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATTTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGC                                                                                        <  SRR4302545.750839/94‑1 (MQ=60)
       CAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGC                                                                                        >  SRR4302545.2930450/1‑94 (MQ=60)
       CAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGC                                                                                        <  SRR4302545.7599359/94‑1 (MQ=60)
       CAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGC                                                                                        >  SRR4302545.1695105/1‑94 (MQ=60)
       CAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGC                                                                                        <  SRR4302545.5347896/94‑1 (MQ=60)
       CAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGC                                                                                        <  SRR4302545.10461729/94‑1 (MQ=60)
        AGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCG                                                                                       >  SRR4302545.9810613/1‑94 (MQ=60)
        ACACAATAACCGGCCCGCGCGACCGTTCATCGTAATCTTTATGTCCCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCG                                                                                       <  SRR4302545.10153879/94‑1 (MQ=60)
          ACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGAT                                                                                     <  SRR4302545.3468618/94‑1 (MQ=60)
           CAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTTACGCCACGACTCACCATGCCGGGGATA                                                                                    >  SRR4302545.101943/1‑94 (MQ=60)
           CAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATA                                                                                    >  SRR4302545.10089534/1‑94 (MQ=60)
           CAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATA                                                                                    >  SRR4302545.2695333/1‑94 (MQ=60)
           CAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATA                                                                                    >  SRR4302545.1181446/1‑94 (MQ=60)
           CAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATA                                                                                    <  SRR4302545.10285246/94‑1 (MQ=60)
            aaaaaagccCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAG                                                                                   <  SRR4302545.2293104/85‑1 (MQ=60)
            AATAAACGTCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAG                                                                                   <  SRR4302545.4374607/94‑1 (MQ=60)
            AATAAACGGCCCGCGCAGCCGTTCATCGTAATCTTTATGTACCACCGGACGTACGATCTCTTTTTTACGCCACGACTCACCGTTCAGGCGATAG                                                                                   <  SRR4302545.9234713/94‑1 (MQ=60)
             ATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGG                                                                                  <  SRR4302545.6006577/94‑1 (MQ=60)
             ATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTAGGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGG                                                                                  <  SRR4302545.4918224/94‑1 (MQ=60)
              TAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGT                                                                                 <  SRR4302545.1653789/94‑1 (MQ=60)
              TAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGT                                                                                 >  SRR4302545.3431512/1‑94 (MQ=60)
               AAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTG                                                                                >  SRR4302545.2475724/1‑94 (MQ=60)
               AAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTG                                                                                >  SRR4302545.3020133/1‑94 (MQ=60)
               AAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTG                                                                                >  SRR4302545.8467342/1‑94 (MQ=60)
               AAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTG                                                                                >  SRR4302545.718955/1‑94 (MQ=60)
               AAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTG                                                                                >  SRR4302545.7853700/1‑94 (MQ=60)
                AACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGA                                                                               <  SRR4302545.9450591/94‑1 (MQ=60)
                AACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGA                                                                               >  SRR4302545.1387409/1‑94 (MQ=60)
                  TGGCCCGCGCGGCTGTTCGTCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGC                                                                             >  SRR4302545.9276130/1‑94 (MQ=60)
                  CGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGC                                                                             >  SRR4302545.5731764/1‑94 (MQ=60)
                   GGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCA                                                                            >  SRR4302545.4283616/1‑94 (MQ=60)
                   GGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCA                                                                            <  SRR4302545.6629510/94‑1 (MQ=60)
                   GGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCA                                                                            >  SRR4302545.8701288/1‑94 (MQ=60)
                   GGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGGTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCA                                                                            >  SRR4302545.463278/1‑94 (MQ=60)
                    GCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAA                                                                           <  SRR4302545.8219432/94‑1 (MQ=60)
                      CCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACT                                                                         >  SRR4302545.4948620/1‑94 (MQ=60)
                      CCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACT                                                                         <  SRR4302545.2593474/94‑1 (MQ=60)
                      CCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACT                                                                         >  SRR4302545.1352548/1‑94 (MQ=60)
                       CGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAAATG                                                                        >  SRR4302545.7441650/1‑94 (MQ=60)
                       CGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTG                                                                        >  SRR4302545.7736363/1‑94 (MQ=60)
                       CGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTG                                                                        >  SRR4302545.6494704/1‑94 (MQ=60)
                       CGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTG                                                                        <  SRR4302545.4020955/94‑1 (MQ=60)
                       CGCGCGGCTGTTCATCGTAATCTGTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTG                                                                        <  SRR4302545.5155116/94‑1 (MQ=60)
                         CGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTT                                                                      <  SRR4302545.2988365/94‑1 (MQ=60)
                         CGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTT                                                                      >  SRR4302545.790396/1‑94 (MQ=60)
                         CGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGGGAGCAACTGTT                                                                      >  SRR4302545.170013/1‑94 (MQ=60)
                          GCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTT                                                                     >  SRR4302545.9265367/1‑94 (MQ=60)
                           CGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTT                                                                    >  SRR4302545.9595793/1‑94 (MQ=60)
                           CGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTT                                                                    >  SRR4302545.6250048/1‑94 (MQ=60)
                            GGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTT                                                                   >  SRR4302545.1283882/1‑94 (MQ=60)
                            GGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTT                                                                   <  SRR4302545.3400728/94‑1 (MQ=60)
                            GGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTT                                                                   <  SRR4302545.8884379/94‑1 (MQ=60)
                            GGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATCCAGGCGATAGGTGATCAACTGTTTTT                                                                   >  SRR4302545.4301878/1‑94 (MQ=60)
                             GCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTC                                                                  <  SRR4302545.8720015/94‑1 (MQ=60)
                             GCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTC                                                                  <  SRR4302545.6303357/94‑1 (MQ=60)
                              CTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCC                                                                 >  SRR4302545.8176215/1‑94 (MQ=60)
                               TGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCA                                                                >  SRR4302545.4650031/1‑94 (MQ=60)
                               TGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCA                                                                >  SRR4302545.7395937/1‑94 (MQ=60)
                               TGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCA                                                                <  SRR4302545.7977938/94‑1 (MQ=60)
                               TGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGAGAGCAACTGTTTTTCCA                                                                >  SRR4302545.5038979/1‑94 (MQ=60)
                                GTCCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCAC                                                               >  SRR4302545.305376/1‑94 (MQ=60)
                                  TCATCGTAATCTTTATGTAGCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCA                                                             <  SRR4302545.7656333/94‑1 (MQ=60)
                                  TCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCA                                                             >  SRR4302545.3671599/1‑94 (MQ=60)
                                  TCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCA                                                             >  SRR4302545.3010387/1‑94 (MQ=60)
                                   CATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCATCAG                                                            >  SRR4302545.5672870/1‑94 (MQ=60)
                                   CATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAG                                                            >  SRR4302545.3534970/1‑94 (MQ=60)
                                   CATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAG                                                            >  SRR4302545.6591009/1‑94 (MQ=60)
                                   CATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAG                                                            >  SRR4302545.1074046/1‑94 (MQ=60)
                                    ATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGC                                                           <  SRR4302545.5080348/94‑1 (MQ=60)
                                    ATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGC                                                           >  SRR4302545.10396959/1‑94 (MQ=60)
                                     TCGTAATCTTTATGTACCACCGGACTTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCC                                                          <  SRR4302545.10666339/94‑1 (MQ=60)
                                     TCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCC                                                          <  SRR4302545.9917215/94‑1 (MQ=60)
                                     TCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCC                                                          >  SRR4302545.3698104/1‑94 (MQ=60)
                                     TCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCC                                                          <  SRR4302545.6927221/94‑1 (MQ=60)
                                     TCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCC                                                          >  SRR4302545.285806/1‑94 (MQ=60)
                                      CGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCG                                                         >  SRR4302545.7719253/1‑94 (MQ=60)
                                      CGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCG                                                         <  SRR4302545.4124257/94‑1 (MQ=60)
                                      CGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCG                                                         >  SRR4302545.7000294/1‑94 (MQ=60)
                                      CGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCG                                                         >  SRR4302545.3629253/1‑94 (MQ=60)
                                      CGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCG                                                         >  SRR4302545.3609331/1‑94 (MQ=60)
                                       GTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCATCAGCCGA                                                        >  SRR4302545.9021420/1‑94 (MQ=60)
                                       GTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGA                                                        >  SRR4302545.8393454/1‑94 (MQ=60)
                                        TAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGAC                                                       >  SRR4302545.3067896/1‑94 (MQ=60)
                                        TAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGAC                                                       >  SRR4302545.3301126/1‑94 (MQ=60)
                                        TAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGAC                                                       >  SRR4302545.6786904/1‑94 (MQ=60)
                                        TAATCTTTAAGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGAC                                                       <  SRR4302545.2106625/94‑1 (MQ=60)
                                         AATCTTTATGTGCCACCGGACGTTCGATCACCTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACG                                                      <  SRR4302545.1800112/94‑1 (MQ=60)
                                         AATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACG                                                      >  SRR4302545.1522762/1‑94 (MQ=60)
                                         AATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACG                                                      <  SRR4302545.4771433/94‑1 (MQ=60)
                                         AATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACG                                                      <  SRR4302545.914776/94‑1 (MQ=60)
                                           TCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGT                                                    <  SRR4302545.7885371/94‑1 (MQ=60)
                                            CTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTA                                                   <  SRR4302545.10079274/94‑1 (MQ=60)
                                            CTTTATGTACCACCGGACGGTAGATAACTTTTTCACGCCTTGATTCACCATGCAGGCGATCGGTGAGCAACTGTTTTTTCACCAGCCGCCGGTA                                                   >  SRR4302545.7651213/1‑94 (MQ=42)
                                              TTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAA                                                 >  SRR4302545.8944170/1‑94 (MQ=60)
                                              TTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAA                                                 >  SRR4302545.3862325/1‑94 (MQ=60)
                                               TATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAA                                                >  SRR4302545.3393850/1‑94 (MQ=60)
                                               TATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAA                                                <  SRR4302545.2217048/94‑1 (MQ=60)
                                               TATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAA                                                <  SRR4302545.6660118/94‑1 (MQ=60)
                                                ATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAAC                                               <  SRR4302545.103422/94‑1 (MQ=60)
                                                ATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAAC                                               <  SRR4302545.5537104/94‑1 (MQ=60)
                                                ATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAAC                                               >  SRR4302545.3510179/1‑94 (MQ=60)
                                                ATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCAACAGCCGACGGTAGAAC                                               >  SRR4302545.5101026/1‑94 (MQ=60)
                                                 TGTACCACCGGACGTTCGATCACGTTTACACGCCACGACTCCCCAGGCAGGCGATAGGTGAGCAACTGGTTTTCCACCAACCGACGGTAAAACG                                              <  SRR4302545.9302676/94‑1 (MQ=60)
                                                    ACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCAT                                           <  SRR4302545.6425422/94‑1 (MQ=60)
                                                     CCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATA                                          >  SRR4302545.6993141/1‑94 (MQ=60)
                                                     CCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATA                                          <  SRR4302545.2531502/94‑1 (MQ=60)
                                                      CACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATAC                                         <  SRR4302545.2085503/94‑1 (MQ=60)
                                                      CACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATAC                                         >  SRR4302545.9539763/1‑94 (MQ=60)
                                                       ACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTTCACCAGCCGACGGTCAAACTCATACT                                        >  SRR4302545.1961503/1‑94 (MQ=60)
                                                        CCGGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAGACTCATACTC                                       >  SRR4302545.2665488/1‑94 (MQ=60)
                                                          GGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCA                                     >  SRR4302545.1674456/1‑94 (MQ=60)
                                                          GGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCA                                     <  SRR4302545.9530013/94‑1 (MQ=60)
                                                          GGACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCA                                     >  SRR4302545.212006/1‑94 (MQ=60)
                                                          GGACGTTAGATCACTTGTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCA                                     <  SRR4302545.10318657/94‑1 (MQ=60)
                                                            ACGTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGT                                   <  SRR4302545.4157784/94‑1 (MQ=60)
                                                             CGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTT                                  >  SRR4302545.7627895/1‑94 (MQ=60)
                                                              cgTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCCCCAGCCGACGGTAAAACTCATACTCCAGTTC                                 <  SRR4302545.8752356/92‑1 (MQ=60)
                                                              GTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTC                                 >  SRR4302545.8808563/1‑94 (MQ=60)
                                                              GTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTC                                 >  SRR4302545.5004973/1‑94 (MQ=60)
                                                              GTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTC                                 >  SRR4302545.4961886/1‑94 (MQ=60)
                                                              GTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTC                                 >  SRR4302545.7052149/1‑94 (MQ=60)
                                                              GTTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTC                                 <  SRR4302545.4679673/94‑1 (MQ=60)
                                                               TTCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCC                                <  SRR4302545.1840221/94‑1 (MQ=60)
                                                                TCGATCACTTTTTCACGCCCCGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGGCGGTAAAACTCATACTCCAGTTCCG                               <  SRR4302545.6564237/94‑1 (MQ=60)
                                                                TCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCT                               >  SRR4302545.8794925/1‑94 (MQ=60)
                                                                TCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCG                               >  SRR4302545.10911662/1‑94 (MQ=60)
                                                                TCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCG                               >  SRR4302545.5412078/1‑94 (MQ=60)
                                                                TCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCG                               >  SRR4302545.10597830/1‑94 (MQ=60)
                                                                TCGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTCCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCG                               <  SRR4302545.6204217/94‑1 (MQ=60)
                                                                 CGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTCAAACTCATACTCCAGTTCCGT                              >  SRR4302545.2739224/1‑94 (MQ=60)
                                                                 CGATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGT                              <  SRR4302545.7130454/94‑1 (MQ=60)
                                                                  GATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTT                             <  SRR4302545.10409126/94‑1 (MQ=60)
                                                                  GATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTT                             >  SRR4302545.9166674/1‑94 (MQ=60)
                                                                  GATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTT                             >  SRR4302545.1248201/1‑94 (MQ=60)
                                                                  GATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGGGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTT                             >  SRR4302545.3569296/1‑94 (MQ=60)
                                                                   ATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTA                            >  SRR4302545.3150309/1‑94 (MQ=60)
                                                                   ATCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTA                            >  SRR4302545.10174490/1‑94 (MQ=60)
                                                                    TCACTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTAT                           <  SRR4302545.4904642/94‑1 (MQ=60)
                                                                      ACTTTTACACGCAACGACTCACCATGCAGGCGATAGGTGAGCACCTGTTTTTCCACCAGCCGACGGTAAAACTCATCCTCCAATTCCGTTATCC                         <  SRR4302545.9698306/94‑1 (MQ=60)
                                                                       CTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCC                        >  SRR4302545.1263636/1‑94 (MQ=60)
                                                                       CTTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCC                        >  SRR4302545.1609963/1‑94 (MQ=60)
                                                                        TTTTTCCCGCCACGACGCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCT                       <  SRR4302545.10621224/94‑1 (MQ=60)
                                                                        TTTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCT                       <  SRR4302545.2279391/94‑1 (MQ=60)
                                                                         TTTTCACGCCGCGACTCGCCATGCAGGCGATAGGTGAGCAACTGTTTTTCCCCCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTA                      <  SRR4302545.8906096/94‑1 (MQ=60)
                                                                         TTTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTA                      <  SRR4302545.4512928/94‑1 (MQ=60)
                                                                         TGTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTA                      <  SRR4302545.7553895/94‑1 (MQ=60)
                                                                          TTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAG                     >  SRR4302545.8029575/1‑94 (MQ=60)
                                                                          TTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAG                     <  SRR4302545.6289344/94‑1 (MQ=60)
                                                                          TTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAG                     <  SRR4302545.1980803/94‑1 (MQ=60)
                                                                          TTTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAG                     <  SRR4302545.8025070/94‑1 (MQ=60)
                                                                           TTCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGT                    <  SRR4302545.4873971/94‑1 (MQ=60)
                                                                            TCACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTG                   <  SRR4302545.9772482/94‑1 (MQ=60)
                                                                             CACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCGGTTCCGTTATCCCTAGTGT                  >  SRR4302545.8527331/1‑94 (MQ=60)
                                                                             CACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGT                  >  SRR4302545.10895303/1‑94 (MQ=60)
                                                                             CACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGT                  <  SRR4302545.5842862/94‑1 (MQ=60)
                                                                              CCGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTC                 <  SRR4302545.5912310/94‑1 (MQ=60)
                                                                              ACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTC                 <  SRR4302545.6163722/94‑1 (MQ=60)
                                                                              ACGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTC                 <  SRR4302545.10841017/94‑1 (MQ=60)
                                                                               CGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCG                <  SRR4302545.6898409/94‑1 (MQ=60)
                                                                               CGCCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCA                <  SRR4302545.4094764/94‑1 (MQ=60)
                                                                                 CCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCC              <  SRR4302545.3986665/94‑1 (MQ=60)
                                                                                 CCACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCC              >  SRR4302545.10431647/1‑94 (MQ=60)
                                                                                  CACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCA             >  SRR4302545.7116410/1‑94 (MQ=60)
                                                                                  CACGACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCA             <  SRR4302545.3271104/94‑1 (MQ=60)
                                                                                     GACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTT          >  SRR4302545.7649562/1‑94 (MQ=60)
                                                                                     GACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTT          >  SRR4302545.3598171/1‑94 (MQ=60)
                                                                                      ACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTC         >  SRR4302545.4828725/1‑94 (MQ=60)
                                                                                      ACTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTC         <  SRR4302545.9065926/94‑1 (MQ=60)
                                                                                      ACTCACCATGCAGGCAATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCACTTC         >  SRR4302545.2555902/1‑94 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACTAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        <  SRR4302545.850257/94‑1 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        <  SRR4302545.5045013/94‑1 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        <  SRR4302545.8822288/94‑1 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        <  SRR4302545.3731505/94‑1 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        <  SRR4302545.3950770/94‑1 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        >  SRR4302545.6407547/1‑94 (MQ=60)
                                                                                       CTCACCATGCAGGCGATAGGAGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCT        >  SRR4302545.1116710/1‑94 (MQ=60)
                                                                                        TCACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTG       >  SRR4302545.1682623/1‑94 (MQ=60)
                                                                                         CACCAGGCAGGCAATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCATTTCCGTTATCCCTAGTGTCGCCAGTTCTGG      <  SRR4302545.9401104/94‑1 (MQ=60)
                                                                                          ACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGC     >  SRR4302545.10551831/1‑94 (MQ=60)
                                                                                          ACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGC     <  SRR4302545.6283371/94‑1 (MQ=60)
                                                                                          ACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGC     <  SRR4302545.4439633/94‑1 (MQ=60)
                                                                                          ACCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGC     >  SRR4302545.5693671/1‑94 (MQ=60)
                                                                                           CCATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGCG    >  SRR4302545.831194/1‑94 (MQ=60)
                                                                                           CCATGCAGGCGATAGGTGAGCAACTGTTTTTACACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGCG    >  SRR4302545.9342281/1‑94 (MQ=60)
                                                                                             ATGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGCGGC  >  SRR4302545.10029906/1‑94 (MQ=60)
                                                                                             |                                                                                             
ATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACTCCAGTTCCGTTATCCCTAGTGTCGCCAGTTCTGGCGGC  >  NC_000913/3926251‑3926437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑