Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A0 F0 I1 R1	245	579.6	28867798	97.7%	28203838	96.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,389,812	Δ1 bp	intergenic (‑149/+4151)	tldD ← / ← cafA	TldD/CafA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,389,811	0	C	.	100.0%	816.6 / NA	210	intergenic (‑148/+4152)	tldD/cafA	TldD/CafA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (86/124); total (86/124)

Only 100 of 242 total aligned reads displayed.

ATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCC  >  NC_000913/3389716‑3389897

aTGCGGCGTGACCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGCCTGTCGGATGc                                                                                        <  2:8702784/96‑1 (MQ=255)

 tGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGcg                                                                                       <  1:10677841/96‑2 (MQ=255)

 tGCGGCGTAAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGcg                                                                                       <  2:3094341/96‑2 (MQ=255)

  gcggcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGctg                                                                                      <  1:3619419/96‑3 (MQ=255)

   cggcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGcggc                                                                                     >  1:849960/1‑93 (MQ=255)

   cggcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGcggc                                                                                     >  1:6952464/1‑93 (MQ=255)

   cggcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGcggc                                                                                     >  1:6522347/1‑93 (MQ=255)

    ggcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGGCGGAGGcggcg                                                                                    >  1:6281266/1‑92 (MQ=14)

     gcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGt                                                                                  >  2:10039905/1‑96 (MQ=255)

      cgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTa                                                                                 >  1:8104184/1‑96 (MQ=255)

        taaaCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATG‑CGGCGTaaa                                                                               >  1:11067140/3‑96 (MQ=11)

        tGAACGCCCTATCCAGCCTACGTTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTaaa                                                                               <  1:12338725/96‑1 (MQ=255)

        tGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTaaa                                                                               >  1:1282689/1‑96 (MQ=255)

        tGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGGCGGATG‑CGGCGTaaa                                                                               >  1:6213896/1‑96 (MQ=255)

          accGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCCTAAACg                                                                             <  2:13708772/94‑1 (MQ=14)

          aaCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACg                                                                             >  2:6564623/1‑96 (MQ=255)

          aaCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACg                                                                             >  2:8058890/1‑96 (MQ=255)

           aCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGc                                                                            <  2:11448953/96‑1 (MQ=255)

           aCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGc                                                                            >  1:1713828/1‑96 (MQ=255)

           aCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGc                                                                            <  1:1160419/96‑1 (MQ=255)

           aCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGc                                                                            >  2:2713935/1‑96 (MQ=255)

            cGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGcc                                                                           <  2:1599544/96‑1 (MQ=255)

            cGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGcc                                                                           <  1:925980/96‑1 (MQ=255)

            cGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGAACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGcc                                                                           <  2:12876710/96‑1 (MQ=255)

             gCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCt                                                                          >  2:2005651/1‑96 (MQ=255)

             gCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCt                                                                          >  1:4673410/1‑96 (MQ=255)

             gCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCt                                                                          >  1:1201006/1‑96 (MQ=255)

              cccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCCCAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCtt                                                                         <  2:9476769/96‑1 (MQ=255)

              cccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCtt                                                                         <  2:1315159/96‑1 (MQ=255)

              cccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCtt                                                                         <  2:2433735/96‑1 (MQ=255)

              cccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCtt                                                                         >  2:5394733/1‑96 (MQ=255)

              cccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCtt                                                                         >  2:7174854/1‑96 (MQ=255)

               ccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTa                                                                        <  2:4070387/96‑1 (MQ=255)

               ccTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTa                                                                        >  2:8333751/1‑96 (MQ=255)

                cTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAt                                                                       <  1:4277335/96‑1 (MQ=255)

                cTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAt                                                                       <  1:728310/96‑1 (MQ=255)

                cTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAt                                                                       <  2:10606978/96‑1 (MQ=255)

                cTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGCCTGTCGGATG‑CGGCGTAAACGCCTTAt                                                                       <  2:10248162/96‑1 (MQ=255)

                 tATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATc                                                                      >  2:12664583/1‑96 (MQ=255)

                 naTCCAGCCTACGGTTATGTTCCGGTTTGAAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATc                                                                      >  1:4467053/2‑96 (MQ=255)

                  aTCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATcc                                                                     <  2:6121221/96‑1 (MQ=255)

                  aTCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATcc                                                                     <  1:13406961/96‑1 (MQ=255)

                  aTCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATcc                                                                     >  1:7396739/1‑96 (MQ=255)

                  aTCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATcc                                                                     <  1:9582069/96‑1 (MQ=255)

                  aTCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATcc                                                                     >  2:9346212/1‑96 (MQ=255)

                  aTCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATcc                                                                     <  1:10191188/96‑1 (MQ=255)

                   tCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCg                                                                    <  1:10053457/96‑1 (MQ=255)

                   tCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCg                                                                    <  1:2115762/96‑1 (MQ=255)

                   tCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCg                                                                    <  1:5339806/96‑1 (MQ=255)

                   tCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGACTGTCGGATG‑CGGCGTAAACGCCTTATCCg                                                                    >  2:11647495/1‑96 (MQ=255)

                    ctaGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGa                                                                   >  1:11842921/3‑96 (MQ=255)

                    ccAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGa                                                                   >  1:9847470/1‑96 (MQ=255)

                     cAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAc                                                                  <  2:383654/96‑1 (MQ=255)

                     cAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAc                                                                  <  2:1152617/96‑1 (MQ=255)

                      aGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAcc                                                                 >  2:6817603/1‑96 (MQ=255)

                      aGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAcc                                                                 <  1:2562260/96‑1 (MQ=255)

                      aGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAcc                                                                 >  2:4848969/1‑96 (MQ=255)

                      aGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAcc                                                                 <  2:14388274/96‑1 (MQ=255)

                       gCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCt                                                                <  2:3289759/96‑1 (MQ=255)

                        ccTACGGTTATGTTCCGGTTTGTAGTCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTa                                                               <  2:5285874/96‑1 (MQ=255)

                        ccTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTa                                                               >  1:12238950/1‑96 (MQ=19)

                        ccTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTa                                                               >  2:5130062/1‑96 (MQ=19)

                        ccTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTa                                                               >  1:8803936/1‑96 (MQ=19)

                         cTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTTAACGCCTTATCCGACCTAc                                                              >  2:12353954/1‑96 (MQ=255)

                         cTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTAc                                                              <  2:11769540/96‑1 (MQ=255)

                         cTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTAc                                                              >  1:5381943/1‑96 (MQ=19)

                         cTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTAc                                                              >  1:520407/1‑96 (MQ=19)

                         cTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTAc                                                              <  1:3342313/96‑1 (MQ=19)

                          tACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACg                                                             <  2:5184693/96‑1 (MQ=19)

                          tACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACg                                                             <  2:2674405/96‑1 (MQ=19)

                           aCGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAACGTCGCATCAGGCAACGGCTGTAGGATG‑CGGCGTGAACGCCTTATCAGACCTACgg                                                            >  1:12638480/1‑96 (MQ=11)

                            cGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGt                                                           <  1:432424/96‑1 (MQ=19)

                            cGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGt                                                           <  2:11069223/96‑1 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGtt                                                          <  1:12968512/96‑1 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGtt                                                          >  2:572720/1‑96 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGtt                                                          >  1:2654780/1‑96 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGtt                                                          >  2:7284004/1‑96 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGtt                                                          <  1:7021515/96‑1 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGtt                                                          <  1:8897108/96‑1 (MQ=19)

                             ggTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑AGGCGTAAACGCCTTATCCGACCTACGGtt                                                          >  1:598115/1‑96 (MQ=255)

                              gTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTa                                                         >  1:1075427/1‑96 (MQ=19)

                              gTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGGTa                                                         >  2:5849522/1‑96 (MQ=255)

                              gTTATGTTCCGGTTTGTAGGCCTCATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTa                                                         <  1:3843043/96‑1 (MQ=255)

                               ttATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTAt                                                        >  1:574538/1‑96 (MQ=19)

                               ttATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGCCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTAt                                                        <  2:3445447/96‑1 (MQ=255)

                                tATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATg                                                       >  1:9046782/1‑96 (MQ=19)

                                 aTGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGt                                                      >  2:4299146/1‑96 (MQ=19)

                                  tGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGtt                                                     >  1:7918624/1‑96 (MQ=19)

                                  tGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGtt                                                     >  1:10041415/1‑96 (MQ=19)

                                   gTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGttt                                                    <  1:13783289/96‑2 (MQ=255)

                                   gTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTc                                                    >  1:221811/1‑96 (MQ=19)

                                   gTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTc                                                    <  2:7515852/96‑1 (MQ=19)

                                    ttCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc                                                   >  1:13522417/1‑96 (MQ=16)

                                    ttCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc                                                   <  2:416015/96‑1 (MQ=16)

                                    ttCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc                                                   >  1:2853675/1‑96 (MQ=16)

                                    tgccGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc                                                   <  1:10434205/94‑1 (MQ=9)

                                     tCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCg                                                  <  2:2365322/96‑1 (MQ=12)

                                     tCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCg                                                  >  2:12187124/1‑96 (MQ=12)

                                     tCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCg                                                  >  2:9637200/1‑96 (MQ=12)

                                                                                     cTGTCGGATGCC‑GCGTAAACGCCTTACCCGACTTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGcc  <  2:13803419/96‑1 (MQ=11)

ATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCC  >  NC_000913/3389716‑3389897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAAC  >  NC_000913/3389712‑3389912

NNNGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCG                                                                                                      <  SRR4302518.11179487/101‑1 (MQ=60)

CCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATNNN                                                                                                      >  SRR4302518.8391101/1‑101 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGNNN                                                                                                     >  SRR4302518.10072310/1‑101 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGNNN                                                                                                     >  SRR4302518.13844059/1‑101 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCTG                                                                                                     <  SRR4302518.3789074/101‑1 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGG                                                                                                     >  SRR4302518.405420/1‑101 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGG                                                                                                     >  SRR4302518.6078408/1‑101 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGG                                                                                                     >  SRR4302518.3181137/1‑101 (MQ=60)

 CGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCGGTCGGATGCGG                                                                                                     >  SRR4302518.6481462/1‑101 (MQ=60)

 CGGATGCGGCGGGAACGCCCTATCCAGCCTACGGTTATGTTCCGGGTGGTAGGCGTGATAAGACGCACAGCGTCGCATCAGGATACGGCTGGCGGATGCGG                                                                                                     >  SRR4302518.195548/1‑101 (MQ=49)

  NNNTGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGC                                                                                                   <  SRR4302518.12800149/101‑1 (MQ=60)

  GGATGCGGCGTGAACGCCGTATCCAGCCTACGGTTATGTGCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.13186821/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.13258278/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.13764231/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.10935706/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.9968439/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.9376223/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGC                                                                                                   >  SRR4302518.4724340/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGC                                                                                                   >  SRR4302518.757440/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGC                                                                                                   >  SRR4302518.2420938/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCCTATCCAGCCTACGGGTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTGGCATCAGGCAACGGCTGTCGGATGCNNN                                                                                                    >  SRR4302518.10467287/1‑101 (MQ=60)

  GGATGCGGCGTGAACGCCATATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGC                                                                                                   >  SRR4302518.6941038/1‑101 (MQ=59)

     nnnggcgtcaccgccaTATCCAGCCTCCGGTTATGTTCCGGTTTGTCGGCCTGATAAGACGCACAGCGTCGCATCAGCCAACGGCTGTCGGATG‑CGGCGTA                                                                                                <  SRR4302518.13021329/85‑1 (MQ=29)

      GCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAA                                                                                               <  SRR4302518.2995442/101‑1 (MQ=60)

       nnnctTGAACGCCCTATCCAGCCTACGTTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAA                                                                                              <  SRR4302518.12921346/96‑1 (MQ=51)

       CGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAA                                                                                              >  SRR4302518.6856666/1‑101 (MQ=60)

       CGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGGAAA                                                                                              >  SRR4302518.7321793/1‑101 (MQ=60)

       CGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGGAAA                                                                                              >  SRR4302518.882818/1‑101 (MQ=60)

        NNNGTGAACGCGCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAAC                                                                                             <  SRR4302518.13440289/101‑1 (MQ=40)

        NNNGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAAC                                                                                             <  SRR4302518.9563653/101‑1 (MQ=53)

        GGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTANNN                                                                                             >  SRR4302518.10696606/1‑101 (MQ=60)

        GGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAAC                                                                                             >  SRR4302518.6418289/1‑101 (MQ=60)

        GGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGGCGGA‑GGCGGCGTAAAC                                                                                             >  SRR4302518.6601413/1‑101 (MQ=46)

         GCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACG                                                                                            >  SRR4302518.2264768/1‑101 (MQ=59)

          CGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAANNN                                                                                           >  SRR4302518.10866712/1‑101 (MQ=56)

          CGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAANNN                                                                                           >  SRR4302518.8506743/1‑101 (MQ=56)

          CGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGC                                                                                           <  SRR4302518.1206754/101‑1 (MQ=57)

          CGGGAACGCCATATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGC                                                                                           <  SRR4302518.5157977/101‑1 (MQ=36)

           NNNAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCC                                                                                          <  SRR4302518.14200818/101‑1 (MQ=46)

           GTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCC                                                                                          <  SRR4302518.961784/101‑1 (MQ=55)

            TGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCT                                                                                         >  SRR4302518.1335274/1‑101 (MQ=52)

            TGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCT                                                                                         >  SRR4302518.2854564/1‑101 (MQ=52)

            TGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGGCGGATG‑CGGCGTAAACGCCT                                                                                         >  SRR4302518.6530782/1‑101 (MQ=39)

            TAAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGNNN                                                                                         >  SRR4302518.11584922/1‑101 (MQ=43)

             NNNCGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTT                                                                                        <  SRR4302518.12536506/101‑1 (MQ=42)

             GCACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCNNN                                                                                        >  SRR4302518.7925732/1‑101 (MQ=43)

             GAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCNNN                                                                                        >  SRR4302518.13852278/1‑101 (MQ=49)

              AACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATACGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCNNN                                                                                       >  SRR4302518.8555551/1‑101 (MQ=45)

              AACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTACACGCCNNN                                                                                       >  SRR4302518.9739894/1‑101 (MQ=45)

              AACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTA                                                                                       >  SRR4302518.7084237/1‑101 (MQ=48)

               NNNCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAT                                                                                      <  SRR4302518.10133475/101‑1 (MQ=37)

               NNNCCCTATCCAGCATACGCTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAT                                                                                      <  SRR4302518.11562427/101‑1 (MQ=28)

               NNNCCCTAACCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTTT                                                                                      <  SRR4302518.10519213/101‑1 (MQ=24)

               ACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAT                                                                                      <  SRR4302518.4488673/101‑1 (MQ=45)

               ACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAT                                                                                      <  SRR4302518.756878/101‑1 (MQ=45)

               ACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTAT                                                                                      >  SRR4302518.1789852/1‑101 (MQ=45)

               ACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTNNN                                                                                      >  SRR4302518.13027887/1‑101 (MQ=44)

                NNNCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATC                                                                                     <  SRR4302518.9975195/101‑1 (MQ=35)

                CGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATC                                                                                     <  SRR4302518.5149570/101‑1 (MQ=43)

                 NNNCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    <  SRR4302518.11254984/101‑1 (MQ=32)

                 NNNCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    <  SRR4302518.10045325/101‑1 (MQ=32)

                 NNNCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    <  SRR4302518.10672784/101‑1 (MQ=32)

                 NNNCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    <  SRR4302518.14023386/101‑1 (MQ=32)

                 GCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    >  SRR4302518.1249495/1‑101 (MQ=40)

                 GCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    >  SRR4302518.6215959/1‑101 (MQ=40)

                 GCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    >  SRR4302518.4919273/1‑101 (MQ=40)

                 GCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    <  SRR4302518.3245097/101‑1 (MQ=40)

                 CCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCC                                                                                    <  SRR4302518.4200436/101‑1 (MQ=38)

                  NNNTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCG                                                                                   <  SRR4302518.10530332/101‑1 (MQ=30)

                  CCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCG                                                                                   <  SRR4302518.764923/101‑1 (MQ=38)

                  CCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCG                                                                                   <  SRR4302518.753414/101‑1 (MQ=38)

                  CCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCG                                                                                   <  SRR4302518.5613396/101‑1 (MQ=38)

                  CCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCG                                                                                   <  SRR4302518.2496584/101‑1 (MQ=38)

                  CCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCG                                                                                   <  SRR4302518.2215441/101‑1 (MQ=38)

                    CTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGAC                                                                                 >  SRR4302518.625369/1‑101 (MQ=33)

                     TATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGNNN                                                                                >  SRR4302518.13944971/1‑101 (MQ=30)

                     TATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACC                                                                                <  SRR4302518.2685235/101‑1 (MQ=31)

                     TATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCATATCCGACC                                                                                >  SRR4302518.1226908/1‑101 (MQ=30)

                     NATCCAGCCTACGGTTATGTTCCGGTTTGAAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACN                                                                                >  SRR4302518.4698378/1‑101 (MQ=27)

                      ATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGANNN                                                                               >  SRR4302518.7779512/1‑101 (MQ=28)

                      ATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCT                                                                               <  SRR4302518.646510/101‑1 (MQ=29)

                      ATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCT                                                                               <  SRR4302518.4197089/101‑1 (MQ=29)

                      ATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCT                                                                               >  SRR4302518.4644937/1‑101 (MQ=29)

                       TCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTA                                                                              <  SRR4302518.2323403/101‑1 (MQ=26)

                       NNNAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTA                                                                              <  SRR4302518.9325630/101‑1 (MQ=19)

                        CTAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCNNN                                                                             >  SRR4302518.12406653/1‑101 (MQ=18)

                        CCAGCCTATGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTAC                                                                             <  SRR4302518.3877197/101‑1 (MQ=23)

                        CCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACannn                                                                             >  SRR4302518.10318438/1‑97 (MQ=24)

                        CCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTTC                                                                             <  SRR4302518.3528942/101‑1 (MQ=23)

                        CCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTAC                                                                             <  SRR4302518.3497988/101‑1 (MQ=24)

                         NNNCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACC                                                                            <  SRR4302518.11934733/101‑1 (MQ=11)

                         NNNCCTACGGTTATGTTCCGGTTTGTAGCCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACG                                                                            <  SRR4302518.12936331/101‑1 (MQ=10)

                         CAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACG                                                                            <  SRR4302518.7332112/101‑1 (MQ=21)

                          NNNCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGG                                                                           <  SRR4302518.10547625/101‑1 (MQ=11)

                          AGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTANNN                                                                           >  SRR4302518.9467342/1‑101 (MQ=19)

                          AGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGG                                                                           >  SRR4302518.657065/1‑101 (MQ=19)

                           NNNTACGGTTATGTTCCGGTTTGTAGGCCTGATCAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGT                                                                          <  SRR4302518.12829698/101‑1 (MQ=10)

                           GCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAATGGCTGACGGATG‑CGGCGTACACGCCTTATCCGACCTACNNN                                                                          >  SRR4302518.13308590/1‑101 (MQ=1)

                           GCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGT                                                                          <  SRR4302518.6084987/101‑1 (MQ=14)

                           GCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGT                                                                          <  SRR4302518.449404/101‑1 (MQ=14)

                            NNNACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTT                                                                         <  SRR4302518.11253652/101‑1 (MQ=11)

                            NNNACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTT                                                                         <  SRR4302518.7657242/101‑1 (MQ=11)

                            NNNACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTT                                                                         <  SRR4302518.13569655/101‑1 (MQ=11)

                            NNNACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTT                                                                         <  SRR4302518.7393718/101‑1 (MQ=11)

                            NNNACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTT                                                                         <  SRR4302518.9328150/101‑1 (MQ=11)

                            CCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGNNN                                                                         >  SRR4302518.9231218/1‑101 (MQ=11)

                            CCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGNNN                                                                         >  SRR4302518.12818522/1‑101 (MQ=11)

                            CCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTT                                                                         <  SRR4302518.2777753/101‑1 (MQ=11)

                             NNNCGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTA                                                                        <  SRR4302518.9177329/101‑1 (MQ=11)

                             NNNCGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTA                                                                        <  SRR4302518.8180454/101‑1 (MQ=11)

                             CTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTA                                                                        >  SRR4302518.540809/1‑101 (MQ=11)

                             CTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGGAAACGCCTTATCCGACCTACGGTTA                                                                        >  SRR4302518.5657260/1‑101 (MQ=11)

                             CTACGGTTATGTTCCGGTTTGTAGGCCTCATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTA                                                                        <  SRR4302518.4024941/101‑1 (MQ=11)

                              TACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTGT                                                                       >  SRR4302518.5529880/1‑101 (MQ=11)

                              TACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTAT                                                                       <  SRR4302518.5791358/101‑1 (MQ=11)

                              TACGGTTATGATCCGGTCTGTAGGCCTGATAAGCCGCACAGCGTCGCATCAGGCAACGGCTATCGGATG‑CGGCGTAAACACCTTATCCGACCTCCGGTTAC                                                                       <  SRR4302518.6666511/101‑1 (MQ=8)

                              NNNGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTAT                                                                       <  SRR4302518.8365829/101‑1 (MQ=11)

                               ACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAACGTCGCATCAGGCAACGGCTGTAGGATG‑CGGCGTGAACGCCTTATCAGACCTACGGTTNNN                                                                      >  SRR4302518.13230254/1‑101 (MQ=7)

                               AAGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATG                                                                      >  SRR4302518.558690/1‑101 (MQ=11)

                                NNNTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATAT                                                                     <  SRR4302518.11119967/101‑1 (MQ=11)

                                CGGTTATGTTCCGTTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTANNN                                                                     >  SRR4302518.14069888/1‑101 (MQ=0)

                                CGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGT                                                                     <  SRR4302518.4673298/101‑1 (MQ=11)

                                 NNNTATGTTCCGGTTGGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTT                                                                    <  SRR4302518.10376300/101‑1 (MQ=10)

                                 GGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTCTGTT                                                                    >  SRR4302518.2781637/1‑101 (MQ=11)

                                 GGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGATATGTT                                                                    >  SRR4302518.1224676/1‑101 (MQ=11)

                                 GGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑AGGCGTAAACGCCTTATCCGACCTACGGTTATGCT                                                                    >  SRR4302518.621330/1‑101 (MQ=10)

                                  NNNATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTT                                                                   <  SRR4302518.14414337/101‑1 (MQ=11)

                                  GTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTC                                                                   >  SRR4302518.7116460/1‑101 (MQ=11)

                                  GTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTC                                                                   <  SRR4302518.1929484/101‑1 (MQ=11)

                                  GTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTC                                                                   >  SRR4302518.1117854/1‑101 (MQ=11)

                                  GTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGGTTTGTTC                                                                   >  SRR4302518.4539824/1‑101 (MQ=10)

                                   TTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCC                                                                  >  SRR4302518.596826/1‑101 (MQ=11)

                                   NNNTGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCC                                                                  <  SRR4302518.15049279/101‑1 (MQ=9)

                                   NNNTGTGCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCC                                                                  <  SRR4302518.10923469/101‑1 (MQ=0)

                                   GTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCC                                                                  <  SRR4302518.5884649/101‑1 (MQ=11)

                                    TATGTTCCGGTTTGTAGGCCTGATAAGACGCGCAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTNNN                                                                 >  SRR4302518.12766733/1‑101 (MQ=10)

                                    TATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTNNN                                                                 >  SRR4302518.9483991/1‑101 (MQ=11)

                                      TGTTCCGGTTTGTAGGCCTGATAAGACGCAGAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAACCGCCTTATCCGACCTACGGTTATGTTCCGTT                                                               >  SRR4302518.4770754/1‑101 (MQ=8)

                                      TGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCNNN                                                               >  SRR4302518.10517956/1‑101 (MQ=9)

                                      TGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCNNN                                                               >  SRR4302518.8315390/1‑101 (MQ=9)

                                       NNNCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCCGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTT                                                              <  SRR4302518.10727858/101‑1 (MQ=0)

                                       NNNCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTT                                                              <  SRR4302518.7634695/101‑1 (MQ=0)

                                       NNNCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTT                                                              <  SRR4302518.8675368/101‑1 (MQ=0)

                                       GTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTT                                                              >  SRR4302518.230758/1‑101 (MQ=7)

                                       GTTACGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCATCGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGCCCTACGGTTATGTTCCGTTT                                                              <  SRR4302518.6276263/101‑1 (MQ=0)

                                       GCTCCGGTTTGTAGGCCTGATAAGCCGCCCAGCGCCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTT                                                              <  SRR4302518.7213899/101‑1 (MQ=1)

                                        TTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGgnnn                                                             >  SRR4302518.14143202/1‑97 (MQ=4)

                                        TTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTG                                                             <  SRR4302518.6079995/101‑1 (MQ=4)

                                        TTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTG                                                             >  SRR4302518.2988327/1‑101 (MQ=4)

                                         TCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGT                                                            >  SRR4302518.5829258/1‑101 (MQ=2)

                                          CCGGTTTGTAGTCCTGATAAGCCGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTA                                                           <  SRR4302518.2631436/101‑1 (MQ=0)

                                          CCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTA                                                           >  SRR4302518.3472981/1‑101 (MQ=0)

                                           CGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATG‑CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAG                                                          >  SRR4302518.2764178/1‑101 (MQ=0)

                                                                                               nnntCCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTTATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCG       <  SRR4302518.12680056/97‑1 (MQ=0)

                                                                                                   GCGGCGTAAACGCCTTGTCCGACCTACGGTTATGTTCCGTTTGTAGGCTTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAA   <  SRR4302518.1098829/101‑1 (MQ=2)

                                                                                                    CGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTANNN  >  SRR4302518.8195221/1‑101 (MQ=0)

                                                                                                    CGACGTCAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAAC  <  SRR4302518.4264409/101‑1 (MQ=7)

CCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAAC  >  NC_000913/3389712‑3389912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`