Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
245 |
579.6 |
28867798 |
97.7% |
28203838 |
96.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,957,092 |
+CC |
intergenic (+26/+58) |
ilvC → / ← ppiC |
ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,957,091 | 1 | . | C | 90.0%
| 554.4
/ 66.7
| 212 | intergenic (+25/+59) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (1/20); new base C (16/173); total (17/195) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
| * | NC_000913 | 3,957,091 | 2 | . | C | 90.2%
| 569.7
/ 66.7
| 214 | intergenic (+25/+59) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (1/20); new base C (16/177); total (17/197) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 256 total aligned reads displayed.
CGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑A‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAT > NC_000913/3956996‑3957176
||
cGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑a > 2:1961411/1‑96 (MQ=255)
gATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCGCC‑CCCCC‑‑A‑‑c > 2:8083086/1‑96 (MQ=255)
aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑cc < 2:2762165/96‑2 (MQ=255)
ttGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑ccc < 2:2087238/96‑3 (MQ=255)
tGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑ccct < 2:3977183/96‑1 (MQ=255)
gAGCAGGTAGATAAGAACCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑Ccctc < 1:4831828/96‑1 (MQ=255)
aGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑Ccctct < 2:4474801/96‑2 (MQ=255)
gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑Ccctctc < 1:8766987/96‑3 (MQ=255)
gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑Ccctctc < 2:3525693/96‑3 (MQ=255)
gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑Ccctctc < 1:9516649/96‑3 (MQ=255)
cAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑Ccctctcc < 2:11398005/96‑4 (MQ=255)
taggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCcaca < 1:12016995/96‑1 (MQ=38)
taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCCCaggga < 2:13684593/96‑1 (MQ=37)
taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACaggga < 2:11777580/96‑1 (MQ=37)
aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACagggag < 2:8613534/96‑1 (MQ=37)
aGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGGGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑CCCCTCTCCCACagggaga < 2:10773431/96‑1 (MQ=25)
gAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACagggagag < 2:1044413/96‑1 (MQ=37)
aaaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTTCCACagggagagg < 1:13425585/96‑1 (MQ=37)
aaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCC‑CCCCG‑‑ACCCTCTCCCACagggagaggg < 2:4732189/96‑1 (MQ=37)
aCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGGCCCCCC‑CCCCG‑‑G‑‑CCCCCCCCCccggagaggga > 2:3662493/1‑96 (MQ=255)
cTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCC‑CCCCG‑‑ACCCCCTCCCACagggggagggag > 2:9071258/1‑96 (MQ=25)
cTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACagggagagggag < 1:8651629/96‑1 (MQ=25)
gcgcGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGaa < 1:9866845/96‑1 (MQ=25)
gcgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCGCAGGGAGAGGGAGaaaa < 1:10967177/96‑1 (MQ=25)
cgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAac < 2:4084210/96‑1 (MQ=25)
cgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAac < 1:8413944/96‑1 (MQ=25)
cgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAac < 1:1942429/96‑1 (MQ=25)
ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCC‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAacc < 1:11342862/96‑2 (MQ=21)
ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGaaaaaa < 1:11500990/96‑3 (MQ=21)
ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAaca < 2:5943161/96‑1 (MQ=25)
cTATATGACAGATATGAAACGTATTGCTGTTGCGGTTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACt < 1:6027435/96‑1 (MQ=21)
cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACt < 1:4698020/96‑1 (MQ=25)
atGCCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑agg < 1:3378287/96‑3 (MQ=21)
atGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGATAAAACACTC‑A‑A‑g < 1:1381636/96‑1 (MQ=25)
gACAGATATGAACCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑A‑ggc < 1:5048773/96‑3 (MQ=21)
aCAGATATGAAACGTATTGCTTTTGCGGTTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑A‑ggcc < 2:13483629/96‑4 (MQ=18)
cAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑A‑ggcct < 1:10027268/96‑5 (MQ=21)
gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACCCTC‑A‑AGGCCTtc < 1:5095813/96‑1 (MQ=18)
gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTtc < 1:13106899/96‑1 (MQ=21)
gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCACCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTtc < 1:283668/96‑1 (MQ=21)
atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCC‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTtct < 2:14345264/96‑1 (MQ=21)
atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑ATG‑GCCTtct < 2:12967849/96‑1 (MQ=18)
tatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTtctc < 2:8502610/96‑1 (MQ=21)
tatGAAACGCATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACCCTC‑A‑AGGCCTtctc < 1:12356093/96‑1 (MQ=18)
atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTcc < 1:6929304/96‑1 (MQ=21)
atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCACACAGGGAGAGGGAGGAAACACAC‑A‑AGGCCTTCTcc > 1:13719036/1‑96 (MQ=18)
atGAAACGTATTGCTGTTGCGGGCTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTcc < 1:10232856/96‑1 (MQ=18)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGATGGAGAAAACACTC‑A‑AGGCCTTCTCCt < 1:6718646/96‑1 (MQ=21)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCt < 1:7758967/96‑1 (MQ=21)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCt < 1:11710122/96‑1 (MQ=21)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCt < 2:11055060/96‑1 (MQ=21)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCt < 1:14431242/96‑1 (MQ=21)
aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTgg < 1:7628982/96‑1 (MQ=21)
aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGga < 2:5409470/96‑1 (MQ=21)
aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGgag < 1:2724416/96‑1 (MQ=21)
aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGgag < 2:7331324/96‑1 (MQ=21)
aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGgag < 1:433799/96‑1 (MQ=21)
cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCG‑CCCCGTCC‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGgaga < 2:5919851/96‑1 (MQ=18)
gTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGaa < 1:9176821/96‑1 (MQ=21)
gTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGaa < 2:11130163/96‑1 (MQ=21)
gTATTGCTGTTGCGGGTTAAGTGAGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACACGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGaa < 2:10147770/96‑1 (MQ=21)
tATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAg < 2:6375156/96‑1 (MQ=21)
aTTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAgg < 1:5822652/96‑1 (MQ=21)
cTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGGGAAAGAAGTCAA‑A‑GCCTTCTCCTGGGGAAGGGCtt > 2:6447007/1‑96 (MQ=17)
cTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCtt < 2:7814353/96‑1 (MQ=21)
tGTTGCTGGTTGAGTGCGCCATGAT‑‑GCCCTCA‑CGCCG‑‑ACCCTCGCCCACCGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTg < 1:5901328/96‑1 (MQ=16)
tGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTg < 1:2014705/96‑1 (MQ=21)
gTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGc < 1:2986687/96‑1 (MQ=21)
ttGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTTGAGAAGGCCTTGCt < 1:5473420/96‑1 (MQ=18)
ttGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCt < 2:10743413/96‑1 (MQ=21)
tGCGGGTTAAGTGCGCGCTGAT‑‑GACCTCC‑CCCCC‑‑ACCCTCTCCCACCGGGGGGGGGGGGAAACACTA‑A‑AGGGCTTCTCCCGGAGAAGGCCTTGCTa > 2:6878191/1‑96 (MQ=255)
gCGGGTTAAGTGCGCGCTGAT‑‑GGCCCCACCCCCGC‑C‑‑CCCTCCCACCCGGAGAGGGAGAGAAAACTC‑A‑ATGACGTCTCCCGGTGAAGGCCTTggtgt > 2:1760206/1‑92 (MQ=255)
gCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCC‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAt < 1:3662493/96‑1 (MQ=21)
cGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 2:5137461/96‑1 (MQ=21)
cGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:14230554/96‑1 (MQ=21)
cGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:211763/96‑1 (MQ=21)
ttAAGTGCGCGCTGAT‑‑GCCCTCC‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAgct < 1:8083086/96‑3 (MQ=18)
tAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg < 2:1196924/96‑1 (MQ=21)
aaGCGCGCGCTGAT‑‑GCCCCCC‑CCCCG‑‑ACCCTCCCCCCCAGGGAGGGGGAGAACACCCTC‑A‑AGGCCTTCCCCTGGAGAAGGCCTTGCTATTAGTTGc < 1:3193093/96‑1 (MQ=16)
gTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ATCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:10790903/96‑1 (MQ=21)
gTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:10304888/96‑1 (MQ=21)
gTGCGCGCTGAT‑‑GCCCTCA‑CCCCC‑‑ACCCTCTCCCACAGGGAGAGGCAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg > 1:6588627/1‑96 (MQ=21)
gTGCGCGCTAAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCACAAAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:2613476/96‑1 (MQ=21)
gcgcTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:12822294/96‑1 (MQ=21)
gcgcTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 2:1856173/96‑1 (MQ=21)
cgcTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCATGGAGAAGGCCTTGCTATTAGTTGCGGTACAg < 2:13818991/96‑1 (MQ=21)
cTGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCa < 2:2740473/96‑1 (MQ=25)
tGAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 2:3045391/96‑1 (MQ=25)
tGAT‑‑CCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCaa < 1:8824238/96‑2 (MQ=25)
gAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc < 2:5548035/96‑1 (MQ=25)
gAT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc < 2:6533007/96‑1 (MQ=25)
aT‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 1:1050734/96‑1 (MQ=25)
t‑‑GCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt < 2:2314957/96‑1 (MQ=25)
gCCCTCA‑CCCCGTCC‑‑CTCCCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCCCCTTa < 2:3222583/96‑1 (MQ=25)
gCCCTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGATATTAGTTGCGGTACAGCACCtca < 1:14328024/96‑3 (MQ=25)
cccTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa < 2:13277373/96‑1 (MQ=37)
ccTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:8932591/96‑1 (MQ=37)
ccTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:9381891/96‑1 (MQ=37)
cTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAATACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatg < 2:12238274/96‑1 (MQ=37)
cTCA‑CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatg > 1:13317051/1‑96 (MQ=37)
||
CGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAT‑‑GCCCTCA‑CCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑A‑A‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAT > NC_000913/3956996‑3957176
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTG > NC_000913/3956992‑3957191
|
NNNGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑C < SRR4302518.8303313/101‑1 (MQ=60)
CGTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCN‑‑N‑‑N > SRR4302518.13889231/1‑101 (MQ=60)
ATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGGTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATTCCCTCACCCCG‑‑A‑‑CC < SRR4302518.9023/101‑1 (MQ=60)
TGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCC < SRR4302518.5454525/101‑1 (MQ=60)
NNNATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCT < SRR4302518.9471186/101‑1 (MQ=60)
CGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccccc > SRR4302518.1939668/1‑97 (MQ=60)
CGAGTGAGCAGGTAGATAAGAACCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCTC < SRR4302518.5084520/101‑1 (MQ=60)
GATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctct < SRR4302518.5356489/101‑6 (MQ=60)
GATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctct > SRR4302518.2303034/1‑96 (MQ=60)
NNNGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCTCTC < SRR4302518.9978006/101‑1 (MQ=60)
NNNGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCTCTC < SRR4302518.12556355/101‑1 (MQ=60)
NNNGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCTCTC < SRR4302518.9192804/101‑1 (MQ=60)
TTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAACCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCC < SRR4302518.5827675/101‑1 (MQ=60)
NNNAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCC < SRR4302518.8103854/101‑1 (MQ=60)
TGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCC < SRR4302518.7013717/101‑1 (MQ=60)
NNNAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCAG‑‑ACCCTCTCCCAC < SRR4302518.11954511/101‑1 (MQ=60)
AGCAGGTAGGTAAGAAACTGCGCGTCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCAC < SRR4302518.2818981/101‑1 (MQ=60)
AGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccccctccnnn > SRR4302518.9201811/1‑91 (MQ=60)
NNNGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACA < SRR4302518.12589492/101‑1 (MQ=60)
GCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACA < SRR4302518.5306124/101‑1 (MQ=60)
NNNGTAGGTAAGAGACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAG < SRR4302518.14725110/101‑1 (MQ=60)
GAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAG < SRR4302518.2049680/101‑1 (MQ=60)
GGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGG < SRR4302518.5305891/101‑1 (MQ=60)
CGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGCAGTTCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGG < SRR4302518.7168710/101‑1 (MQ=60)
NNNGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCTCCCCG‑‑ACCCTCTCCCACAGGGA < SRR4302518.9933001/101‑1 (MQ=60)
NNNTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA < SRR4302518.10931871/101‑1 (MQ=60)
AGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCAGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA < SRR4302518.136897/101‑1 (MQ=60)
NNNAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTTCCACAGGGAGAGG < SRR4302518.14042731/101‑1 (MQ=60)
GTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGG < SRR4302518.3135579/101‑1 (MQ=60)
GTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCACCCCG‑‑ACCCTCTCCCACAGGGAGAGG > SRR4302518.4559521/1‑101 (MQ=60)
TAAGAAACTGCGCGGCTATATGACAGATATGAAACGTAGTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGG < SRR4302518.2752817/101‑1 (MQ=60)
AAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGA < SRR4302518.4255350/101‑1 (MQ=60)
NNNAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAG < SRR4302518.9072728/101‑1 (MQ=60)
NNNACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGA < SRR4302518.7409991/101‑1 (MQ=60)
NNNCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAA < SRR4302518.10338371/101‑1 (MQ=60)
NNNGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCGCAGGGAGAGGGAGAAAA < SRR4302518.11480982/101‑1 (MQ=60)
NNNGCGCGGCTATATGACAGACATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAA < SRR4302518.13413861/101‑1 (MQ=60)
ACTGCGCGGCTATATGACAGATATGAAACGGATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAA < SRR4302518.6267892/101‑1 (MQ=60)
NNNCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAAC < SRR4302518.8826312/101‑1 (MQ=60)
CTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAAC < SRR4302518.2030871/101‑1 (MQ=60)
CTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCACCCCGCCC‑‑CTCTCCCACAGGGAGtgggcgtannn > SRR4302518.12087869/1‑90 (MQ=60)
TGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACA < SRR4302518.1222765/101‑1 (MQ=60)
NNNGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACC < SRR4302518.11874517/101‑1 (MQ=60)
NNNGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAAAA < SRR4302518.12040438/101‑1 (MQ=60)
nnnttgtTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGGGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGCAGAAAACAC < SRR4302518.15071010/94‑1 (MQ=60)
NNNCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACAC < SRR4302518.13776394/101‑1 (MQ=60)
CGCGTCTATATGACAGATATGAAACGTATTGCTGTTGCGGTTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT < SRR4302518.6333260/101‑1 (MQ=60)
CGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT < SRR4302518.4944878/101‑1 (MQ=60)
CGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A < SRR4302518.2192767/101‑1 (MQ=60)
CGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A < SRR4302518.7059817/101‑1 (MQ=60)
NNNTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑CA < SRR4302518.12029988/101‑1 (MQ=60)
GCTATATGCCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AG‑G < SRR4302518.3535640/101‑1 (MQ=60)
GCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGATAAAACACTC‑AA‑G < SRR4302518.1439163/101‑1 (MQ=60)
GCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AG‑G < SRR4302518.3535641/101‑1 (MQ=60)
NNNTATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G‑C < SRR4302518.9231011/101‑1 (MQ=60)
TATATGACAGATATGAACCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G‑GC < SRR4302518.5310513/101‑1 (MQ=60)
NNNGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCT < SRR4302518.10503438/101‑1 (MQ=60)
TTGACCGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACCC‑AAGG‑CCTT < SRR4302518.6297147/101‑1 (MQ=56)
TGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACCCTC‑AAGG‑CCTTC < SRR4302518.5359482/101‑1 (MQ=60)
TGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCACCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTC < SRR4302518.295093/101‑1 (MQ=60)
NNNCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTC < SRR4302518.13712873/101‑1 (MQ=60)
NNNGATATGAAACGCATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACCCTC‑AAGG‑CCTTCTC < SRR4302518.12939238/101‑1 (MQ=41)
AGAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGGGAGGGGGAAAACACTCcaggccttnnn > SRR4302518.14943121/1‑90 (MQ=60)
ACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTC < SRR4302518.6788242/101‑1 (MQ=60)
ACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTC < SRR4302518.2919212/101‑1 (MQ=60)
NNNATATGAAACGTATTGCTGTTGCGGGCTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCC < SRR4302518.10715670/101‑1 (MQ=56)
CAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCC < SRR4302518.1734435/101‑1 (MQ=60)
CAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCC < SRR4302518.7297123/101‑1 (MQ=60)
NNNTATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCT < SRR4302518.11061496/101‑1 (MQ=60)
NNNTATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCT < SRR4302518.12263541/101‑1 (MQ=60)
NNNTATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCT < SRR4302518.15102238/101‑1 (MQ=60)
NNNTATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCT < SRR4302518.8151653/101‑1 (MQ=60)
NNNTATGAAACGTATTGCTGTTGCGGGTTAAGTGCCCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAACCACTC‑AAGG‑CCTTCTCCT < SRR4302518.14388021/101‑1 (MQ=57)
AGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGATGGAGAAAACACTC‑AAGG‑CCTTCTCCT < SRR4302518.7067976/101‑1 (MQ=60)
GGTATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCC‑‑ACCCTCTCCCACAGGGAGAGGGGGAAAACACTCAAA‑G‑CCTTCTCNNN > SRR4302518.14965102/1‑101 (MQ=56)
NNNTGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGG < SRR4302518.8018005/101‑1 (MQ=60)
NNNTGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTCG < SRR4302518.11077882/101‑1 (MQ=60)
NNNTGAAACGTATCGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGG < SRR4302518.10732909/101‑1 (MQ=56)
TATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ATCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGA < SRR4302518.6152135/101‑1 (MQ=60)
acgacACGTATTGCTGTTGCGGGTTAAGCGCGCGCTGATGCACTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAG < SRR4302518.878881/96‑1 (MQ=55)
ATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAG < SRR4302518.2853877/101‑1 (MQ=60)
ATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAG < SRR4302518.450840/101‑1 (MQ=60)
ATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCACACAGGGAGAGGGAGGAAACACAC‑AAGG‑CCTTCTCCTGNNN > SRR4302518.14347229/1‑101 (MQ=60)
NNNACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAA < SRR4302518.9619135/101‑1 (MQ=60)
NNNGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAATG < SRR4302518.14944896/101‑1 (MQ=60)
NNNGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGG < SRR4302518.12803780/101‑1 (MQ=60)
AACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGG < SRR4302518.6117631/101‑1 (MQ=60)
TATTGCTGTTGCGGGTTAGGTGCGCGCTGATGCCCCCACCCCG‑‑ACCCCCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTT < SRR4302518.4925142/101‑1 (MQ=58)
NNNTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTT < SRR4302518.9155067/101‑1 (MQ=60)
actgtTGTTGCTGGTTGAGTGCGCCATGATGCCCTCACGCCG‑‑ACCCTCGCCCACCGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTG < SRR4302518.6200463/96‑1 (MQ=39)
ATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTG < SRR4302518.2107571/101‑1 (MQ=60)
ATGGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTG < SRR4302518.2757572/101‑1 (MQ=60)
TTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGC < SRR4302518.3127082/101‑1 (MQ=60)
NNNCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGC < SRR4302518.13658328/101‑1 (MQ=60)
TGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTTGAGAAGGCCTTGCT < SRR4302518.5752129/101‑1 (MQ=60)
TGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCcttct > SRR4302518.7256609/1‑96 (MQ=60)
TGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCT < SRR4302518.2171990/101‑1 (MQ=60)
NNNTGTTGCGGGCTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCCCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCT < SRR4302518.8146575/101‑1 (MQ=53)
NNNTTGCGGGTTAAGTGCGCGATGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTATCCTGGAGAAGGCCTTGCTAT < SRR4302518.13407182/101‑1 (MQ=53)
CTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTAT < SRR4302518.3834231/101‑1 (MQ=60)
CTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTAT < SRR4302518.1496492/101‑1 (MQ=60)
TTTTGCGGGTTAAGTGCGCGCTGATGCCCTCCACCCC‑‑ACCCTCTCCCACAGGGGGAGGGAGGGAACACTC‑AAaggccttccctcggggaggcctgtctnnn > SRR4302518.12025594/1‑72 (MQ=20)
TGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATT < SRR4302518.220305/101‑1 (MQ=60)
NNNTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATT < SRR4302518.14885340/101‑1 (MQ=60)
NNNCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAG < SRR4302518.8557033/101‑1 (MQ=60)
TGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGT < SRR4302518.3277809/101‑1 (MQ=60)
NNNGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGCT < SRR4302518.8484975/101‑1 (MQ=60)
NNNTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGC < SRR4302518.10327087/101‑1 (MQ=60)
GGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGC < SRR4302518.5762681/101‑1 (MQ=60)
GGGTTAAGCGCGCGCTGATGCCCCCCCCCCG‑‑ACCCTCCCCCCCAGGGAGGGGGAGAACACCCTC‑AAGG‑CCTTCCCCTGGAGAAGGCCTTGCTATTAGTTGC < SRR4302518.3341754/101‑1 (MQ=28)
GAGTTAAGTGCGCGCTGTTGCATTCACCACG‑‑ACCCTATCCCACAGGGAGAGGGAGACAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTTC < SRR4302518.3121612/101‑1 (MQ=49)
GGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCG < SRR4302518.1068135/101‑1 (MQ=60)
NNNAAGTGCGCGCTGATGCCCTCACCCCG‑‑ATCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGG < SRR4302518.11297627/101‑1 (MQ=60)
NNNAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGG < SRR4302518.10790678/101‑1 (MQ=60)
GTAAAGTGCGCGCTAATGCCCTCACCCCG‑‑ACCCTCTCACAAAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGG < SRR4302518.2738715/101‑1 (MQ=60)
TAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTA < SRR4302518.5006431/101‑1 (MQ=60)
NNNTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACCCTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTCC < SRR4302518.11565205/101‑1 (MQ=51)
NNNGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302518.13418830/101‑1 (MQ=60)
NNNGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302518.10520903/101‑1 (MQ=60)
NNNGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAAA < SRR4302518.9857498/101‑1 (MQ=60)
NNNGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCGCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302518.8798778/101‑1 (MQ=60)
AGTGCGCGCTGATCCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302518.3391637/101‑1 (MQ=60)
GTGCGCGCTGATGCCCTCACCCCG‑‑ACCCACTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAG < SRR4302518.2924606/101‑1 (MQ=60)
GTGCGCGCTGATGCCCTCACCCCC‑‑ACCCTCTCCCACAGGGAGAGGCAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTGCAG > SRR4302518.6927473/1‑101 (MQ=60)
NNNCGCTGACGCCCTCACCCCG‑‑ACCCTCCCCCAGAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGgt < SRR4302518.11835038/101‑3 (MQ=60)
GGGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGCAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACANNN > SRR4302518.14229468/1‑101 (MQ=60)
NNNGCTGATCCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAA < SRR4302518.9252359/101‑1 (MQ=60)
nnngctgaagccctccccccgcccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAC < SRR4302518.10354665/77‑1 (MQ=60)
CGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCT < SRR4302518.1092148/101‑1 (MQ=60)
GCTGATGCCCTCCCCCCGGCC‑‑CTCTCCCACTGGGAGAGGGAGAAAACACTCAAA‑G‑CCTTCTTCGCGTGAAGGCCTTGCTATTATATGCGTTACAGCACCCT > SRR4302518.7031561/1‑101 (MQ=17)
NNNATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTA < SRR4302518.9487044/101‑1 (MQ=60)
NNNATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTA < SRR4302518.10467066/101‑1 (MQ=60)
NNNATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGATATTAGTTGCGGTACAGCACCTCA < SRR4302518.14990892/101‑1 (MQ=60)
CTGATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTAA < SRR4302518.3606904/101‑1 (MQ=60)
NNNGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT < SRR4302518.12082383/101‑1 (MQ=60)
gccttgagtgttttctccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGGACAGCACCTTAAT > SRR4302518.6568376/19‑101 (MQ=60)
NNNCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGA < SRR4302518.7847473/101‑1 (MQ=60)
GCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAT < SRR4302518.5347619/101‑1 (MQ=60)
NNNCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGT < SRR4302518.12249480/101‑1 (MQ=60)
CCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGT > SRR4302518.1428848/1‑101 (MQ=60)
CCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑GACCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAacataatgaatt > SRR4302518.3995253/1‑89 (MQ=60)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGGGGGGGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTG > SRR4302518.6248338/1‑101 (MQ=60)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATNNN > SRR4302518.13930148/1‑101 (MQ=60)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTG < SRR4302518.6794827/101‑1 (MQ=60)
CTCACCCCG‑‑ACCCGCTCCCACAGGGAGGGGGAGGAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGATGCGGTACAGCACCTTAATGATNNN > SRR4302518.11472531/1‑101 (MQ=60)
nnncccgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCCGGAGAAGGCCTTGCTATTAGTTGCAGTACAGCACCTTAATGATGTGAT < SRR4302518.8411374/91‑1 (MQ=60)
aaccccgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTNNN > SRR4302518.9237278/11‑101 (MQ=60)
nnnccgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATA < SRR4302518.11016835/92‑1 (MQ=60)
CCCG‑‑ACCCTCTCCCACCGGGGGAGGGGGAAAACAATC‑AAGG‑CCTTCTCCTGGAGAAGGCCCTGCTATTAGTTTCGGTACAGCACCTgaaagatgtggtnnn > SRR4302518.12985310/1‑86 (MQ=39)
CCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGTGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC > SRR4302518.1992528/1‑101 (MQ=60)
ccccgcccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT < SRR4302518.1794005/93‑1 (MQ=60)
NN‑‑N‑‑CTCTCCCACAGGGGGAGGGAAAAAACGCTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAA < SRR4302518.14305305/101‑1 (MQ=60)
nnnaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCC < SRR4302518.13094076/95‑1 (MQ=60)
nnnccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCG < SRR4302518.12898530/96‑1 (MQ=60)
nnnccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCG < SRR4302518.9509462/96‑1 (MQ=60)
cgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATNNN > SRR4302518.11591263/6‑101 (MQ=60)
cgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCG < SRR4302518.4702968/96‑1 (MQ=60)
gaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATGCGA > SRR4302518.2342380/5‑101 (MQ=60)
gaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCATAATGATGTGATATCNNN > SRR4302518.10308988/5‑101 (MQ=60)
cccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCNNN > SRR4302518.11946319/4‑101 (MQ=60)
accCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAA < SRR4302518.795890/98‑1 (MQ=60)
accCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAA < SRR4302518.7089478/98‑1 (MQ=60)
N‑‑NNCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACT < SRR4302518.14292817/101‑1 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACT > SRR4302518.6715305/1‑101 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACG > SRR4302518.6695320/1‑101 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAC < SRR4302518.1037903/99‑1 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAC > SRR4302518.4799580/3‑101 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAC < SRR4302518.1038361/99‑1 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGGACAGCACCTTAATGATGTGATATCCGAAC > SRR4302518.1954992/3‑101 (MQ=60)
NNNTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTG < SRR4302518.8413510/101‑1 (MQ=60)
CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAANNN > SRR4302518.7521667/1‑101 (MQ=60)
CTCTCCCACAGGGAGAGAGAGAAAACACTC‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTG < SRR4302518.4073043/101‑1 (MQ=60)
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CATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTG > NC_000913/3956992‑3957191
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
