Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,464,932 |
A→G |
G853G (GGT→GGC) |
yheB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,464,932 | 0 | A | G | 94.6%
| 753.3
/ 22.2
| 239 | G853G (GGT→GGC) | yheB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (7/6); new base G (98/128); total (105/134) |
| Fisher's exact test for biased strand distribution p-value = 5.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 246 total aligned reads displayed.
CGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCAT > NC_000913/3464842‑3465021
|
cGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGcc < 1:2930332/93‑1 (MQ=255)
ggTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACTAACCATACCg > 1:717013/1‑93 (MQ=255)
ggTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCg > 1:5528769/1‑93 (MQ=255)
gTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCga < 2:2368624/93‑1 (MQ=255)
gTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCga < 1:4391587/93‑1 (MQ=255)
gCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCgaga > 1:269528/1‑93 (MQ=255)
gCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCgaga > 1:1458446/1‑93 (MQ=255)
cTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGAtt > 1:1230103/1‑93 (MQ=255)
tGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTa > 2:2648682/1‑93 (MQ=255)
tGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTa < 1:984530/93‑1 (MQ=255)
tGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTa > 1:701748/1‑93 (MQ=255)
tGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAAACATGCCGAGATTa > 1:6115072/1‑93 (MQ=255)
gTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTAc < 1:632012/93‑1 (MQ=255)
gTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTAc < 2:3998788/93‑1 (MQ=255)
ttCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACg < 2:4854496/93‑1 (MQ=255)
tCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGc > 1:1635574/1‑93 (MQ=255)
tCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGc > 2:4084674/1‑93 (MQ=255)
tCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGc < 2:2805388/93‑1 (MQ=255)
tCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGc < 1:3855186/93‑1 (MQ=255)
tttAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCtt > 1:2587462/1‑93 (MQ=255)
ttAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTc < 2:3780771/93‑1 (MQ=255)
ttAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTc < 1:5204526/93‑1 (MQ=255)
tAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCt > 2:4222921/1‑93 (MQ=255)
tAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCt < 1:1042589/93‑1 (MQ=255)
tCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTgcg < 1:3716975/93‑1 (MQ=255)
aGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCa < 1:2494898/93‑1 (MQ=255)
aGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCa < 2:2828109/93‑1 (MQ=255)
aGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCa < 2:5308432/93‑1 (MQ=255)
aGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCa > 1:3599122/1‑93 (MQ=255)
ggCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCAt > 2:5241186/1‑93 (MQ=255)
cGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCt > 2:689918/1‑93 (MQ=255)
cGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCt < 1:4141953/93‑1 (MQ=255)
gTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTg > 1:5553416/1‑93 (MQ=255)
tGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGc > 1:906129/1‑93 (MQ=255)
tGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGc < 2:3530262/93‑1 (MQ=255)
ggAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACTAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCa < 1:4552468/93‑1 (MQ=255)
ggAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCa < 2:2104697/93‑1 (MQ=255)
ggAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCa < 2:1124042/93‑1 (MQ=255)
aaTTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATg > 2:4562828/1‑93 (MQ=255)
aTTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGa < 1:5036448/93‑1 (MQ=255)
tCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGAcc < 1:3261414/93‑1 (MQ=255)
tCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGAcc > 2:1974483/1‑93 (MQ=255)
ccGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCa > 1:4029542/1‑93 (MQ=255)
cGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAg > 2:396868/1‑93 (MQ=255)
cGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAg < 2:5556523/93‑1 (MQ=255)
ggAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGa < 2:6300008/93‑1 (MQ=255)
ggAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGa > 1:1905467/1‑93 (MQ=255)
ggAGACAGGTTAGTGCCGCCCGGCAGGTCGCCCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGa < 1:5609455/93‑1 (MQ=255)
agaCAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACg > 2:2308059/1‑93 (MQ=255)
gaCAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGa < 2:1430439/93‑1 (MQ=255)
gaCAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGa > 1:4425551/1‑93 (MQ=255)
cAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGc < 1:895027/93‑1 (MQ=255)
cAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGc > 2:3314638/1‑93 (MQ=255)
cAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGc < 2:775046/93‑1 (MQ=255)
aGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCa < 1:2135403/93‑1 (MQ=255)
aGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCa > 1:2996421/1‑93 (MQ=255)
ggTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAt > 2:1874418/1‑93 (MQ=255)
ttAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCa < 2:3128929/93‑1 (MQ=255)
ttAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCa > 1:5734358/1‑93 (MQ=255)
aGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCaga < 2:4435973/93‑1 (MQ=255)
gTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagag < 1:107624/93‑1 (MQ=255)
gTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagag > 1:3123876/1‑93 (MQ=255)
gTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagag > 1:978784/1‑93 (MQ=255)
tGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagaga < 1:4875031/93‑1 (MQ=255)
gccgccCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagagag < 2:3739266/93‑1 (MQ=255)
gccgccCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagagag > 2:3036500/1‑93 (MQ=255)
ccgccCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAgagaga < 2:4784704/93‑1 (MQ=255)
ccgccCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAgagaga < 1:3918109/93‑1 (MQ=255)
cgccCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGAt < 1:1330963/93‑1 (MQ=255)
gccCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATa > 2:406623/1‑93 (MQ=255)
cccGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAg < 1:3295205/93‑1 (MQ=255)
cccGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAg > 1:5803114/1‑93 (MQ=255)
ccGGCAGGTCGCGCGCGATTGACCAGATGCCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGa < 2:2583280/93‑1 (MQ=255)
ccGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGa < 2:4952963/93‑1 (MQ=255)
cGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGaa < 2:4256770/93‑1 (MQ=255)
aGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACAcc > 2:635519/1‑93 (MQ=255)
aGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACAcc < 1:5400962/93‑1 (MQ=255)
ggTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCt < 1:2081195/93‑1 (MQ=255)
gTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTc < 2:2374353/93‑1 (MQ=255)
cgcgcgcgATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGc > 2:5493379/1‑93 (MQ=255)
gcgcgcgATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGcc > 2:3335955/1‑93 (MQ=255)
cgcgcgATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGccc < 2:5003799/93‑1 (MQ=255)
gcgATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGa > 2:5144937/1‑93 (MQ=255)
cgATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGaa < 2:5817652/93‑1 (MQ=255)
cgATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGaa < 2:573448/93‑1 (MQ=255)
gATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAc > 1:5696092/1‑93 (MQ=255)
gATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAc > 2:3660643/1‑93 (MQ=255)
aTTGACCAGATACCACCCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcg < 1:1544969/93‑1 (MQ=255)
aTTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcg > 1:5425725/1‑93 (MQ=255)
tGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcgtc < 2:1054835/93‑1 (MQ=255)
gACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcgtcg > 2:5936465/1‑93 (MQ=255)
ccAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGtt < 2:1791334/93‑1 (MQ=255)
cAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTc > 1:4928472/1‑93 (MQ=255)
aGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCa > 1:2897209/1‑93 (MQ=255)
gATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCAc > 2:3373380/1‑93 (MQ=255)
aTACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACg > 2:6200873/1‑93 (MQ=255)
accaaccaTGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGcc > 1:5912271/1‑93 (MQ=255)
ccaaccaTGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCa < 1:1733598/93‑1 (MQ=255)
aaccaTGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAAc < 2:2166047/93‑1 (MQ=255)
aaccaTGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAAc < 2:2438872/93‑1 (MQ=255)
|
CGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCAT > NC_000913/3464842‑3465021
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGG > NC_000913/3464839‑3465024
|
CTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATG > SRR4302537.1124650/1‑94 (MQ=60)
CGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACTAACCATACCG > SRR4302537.721911/1‑94 (MQ=60)
CGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCG < SRR4302537.2950910/94‑1 (MQ=60)
CGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCG > SRR4302537.5566511/1‑94 (MQ=60)
GTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAG < SRR4302537.4421866/94‑1 (MQ=60)
TGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGA > SRR4302537.271426/1‑94 (MQ=60)
TGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGA > SRR4302537.1468598/1‑94 (MQ=60)
GCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGAT > SRR4302537.176068/1‑94 (MQ=60)
CCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATT > SRR4302537.1238657/1‑94 (MQ=60)
CTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTA > SRR4302537.706554/1‑94 (MQ=60)
CTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAAACATGCCGAGATTA > SRR4302537.6157091/1‑94 (MQ=60)
CTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGACTGACCAGATACCAACCATGCCGAGATTA > SRR4302537.870632/1‑94 (MQ=60)
TGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTAC < SRR4302537.4439185/94‑1 (MQ=60)
TGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTAC > SRR4302537.4935618/1‑94 (MQ=60)
TGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTAC < SRR4302537.542002/94‑1 (MQ=60)
TGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTAC < SRR4302537.991328/94‑1 (MQ=60)
GTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACG < SRR4302537.3920800/94‑1 (MQ=60)
GTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACG > SRR4302537.2699891/1‑94 (MQ=60)
GTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACG < SRR4302537.2460513/94‑1 (MQ=60)
GTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACG < SRR4302537.2574863/94‑1 (MQ=60)
GTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACG < SRR4302537.636310/94‑1 (MQ=60)
GTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACG > SRR4302537.1056168/1‑94 (MQ=60)
TTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGC > SRR4302537.1647028/1‑94 (MQ=60)
TTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGC < SRR4302537.5284741/94‑1 (MQ=60)
TCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCT < SRR4302537.3882171/94‑1 (MQ=60)
TCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCT < SRR4302537.5761660/94‑1 (MQ=60)
CTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTT > SRR4302537.2605568/1‑94 (MQ=60)
TTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCT < SRR4302537.5240328/94‑1 (MQ=60)
TTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCT < SRR4302537.1497618/94‑1 (MQ=60)
TAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTG < SRR4302537.4005188/94‑1 (MQ=60)
TAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTG < SRR4302537.1049787/94‑1 (MQ=60)
AGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGC > SRR4302537.592875/1‑94 (MQ=60)
TCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGC < SRR4302537.961625/94‑1 (MQ=60)
TCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGC < SRR4302537.3743102/94‑1 (MQ=60)
TCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGC > SRR4302537.281780/1‑94 (MQ=60)
CAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCA > SRR4302537.3624491/1‑94 (MQ=60)
AGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCAT < SRR4302537.2512464/94‑1 (MQ=60)
AGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCAT > SRR4302537.3302058/1‑94 (MQ=60)
GCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCC < SRR4302537.5634294/94‑1 (MQ=60)
CGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTG < SRR4302537.4170847/94‑1 (MQ=60)
CGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTG > SRR4302537.5591338/1‑94 (MQ=60)
CGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTG < SRR4302537.5460029/94‑1 (MQ=60)
CGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTG > SRR4302537.3750858/1‑94 (MQ=60)
GTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGC < SRR4302537.5521722/94‑1 (MQ=60)
GTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGC > SRR4302537.912389/1‑94 (MQ=60)
TGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCA < SRR4302537.1391566/94‑1 (MQ=60)
GGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACTAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCAT < SRR4302537.4583971/94‑1 (MQ=60)
AATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGA > SRR4302537.5051886/1‑94 (MQ=60)
ATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGCCCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGAC < SRR4302537.5610282/94‑1 (MQ=60)
ATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGAC < SRR4302537.5071120/94‑1 (MQ=60)
TTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACC < SRR4302537.4387074/94‑1 (MQ=60)
TTCCGGAGACAGGTTAGTGCCGCCCGGCAGGACGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACC > SRR4302537.5999219/1‑94 (MQ=60)
TCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCA < SRR4302537.3284416/94‑1 (MQ=60)
TCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCA > SRR4302537.4057745/1‑94 (MQ=60)
CGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGA > SRR4302537.1918701/1‑94 (MQ=60)
GGAGACAGGTTAGTGCCGCCCGGCAGGTCGCCCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAC < SRR4302537.5647807/94‑1 (MQ=60)
GAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACG < SRR4302537.1668450/94‑1 (MQ=60)
GAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACG < SRR4302537.3583401/94‑1 (MQ=60)
AGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGA > SRR4302537.4456120/1‑94 (MQ=60)
ACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGC > SRR4302537.4037498/1‑94 (MQ=60)
CAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCA > SRR4302537.3017315/1‑94 (MQ=60)
CAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCA < SRR4302537.901208/94‑1 (MQ=60)
AGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAT > SRR4302537.1181800/1‑94 (MQ=60)
AGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAT < SRR4302537.2150436/94‑1 (MQ=60)
AGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAT < SRR4302537.6475790/94‑1 (MQ=60)
GTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCA > SRR4302537.5773618/1‑94 (MQ=60)
TTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAG < SRR4302537.4136974/94‑1 (MQ=60)
TTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAG < SRR4302537.5705319/94‑1 (MQ=60)
TAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGA < SRR4302537.318850/94‑1 (MQ=60)
AGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAG > SRR4302537.3145740/1‑94 (MQ=60)
AGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAG > SRR4302537.985541/1‑94 (MQ=60)
AGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAG > SRR4302537.1298822/1‑94 (MQ=60)
GTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGA < SRR4302537.108407/94‑1 (MQ=60)
TGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAG < SRR4302537.4908680/94‑1 (MQ=60)
GCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGA > SRR4302537.3144066/1‑94 (MQ=60)
GCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGA < SRR4302537.5820285/94‑1 (MQ=60)
CCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGAT < SRR4302537.4501029/94‑1 (MQ=60)
CCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGAT < SRR4302537.783538/94‑1 (MQ=60)
CCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGAT < SRR4302537.3945497/94‑1 (MQ=60)
CGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATA < SRR4302537.1340240/94‑1 (MQ=60)
GCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAG > SRR4302537.5842907/1‑94 (MQ=60)
CCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGA < SRR4302537.3318495/94‑1 (MQ=60)
CCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAA > SRR4302537.3874305/1‑94 (MQ=60)
CGGCAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAAC > SRR4302537.1541052/1‑94 (MQ=60)
CAGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACC < SRR4302537.4432216/94‑1 (MQ=60)
AGGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCT < SRR4302537.5437825/94‑1 (MQ=60)
GGTCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTC < SRR4302537.2095854/94‑1 (MQ=60)
GGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTC < SRR4302537.4872754/94‑1 (MQ=60)
TCGCGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGC < SRR4302537.5785778/94‑1 (MQ=60)
TCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGC < SRR4302537.3715371/94‑1 (MQ=60)
CGCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCT > SRR4302537.961828/1‑94 (MQ=60)
GCGCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTG < SRR4302537.2842261/94‑1 (MQ=60)
GCGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAA < SRR4302537.1001746/94‑1 (MQ=60)
CGTTTGACCAGATACCAGCCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAC < SRR4302537.6460094/94‑1 (MQ=60)
CGATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAC > SRR4302537.5735071/1‑94 (MQ=60)
GATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGCACG > SRR4302537.2999148/1‑94 (MQ=60)
GATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACG > SRR4302537.5462711/1‑94 (MQ=60)
ATTGACCAGATACCACCCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGT < SRR4302537.1555756/94‑1 (MQ=60)
ATTGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGT > SRR4302537.905999/1‑94 (MQ=60)
TGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCG < SRR4302537.4981176/94‑1 (MQ=60)
TGACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCG < SRR4302537.3367412/94‑1 (MQ=60)
ACCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTT < SRR4302537.1604470/94‑1 (MQ=60)
ACCAGATACCAACCATGCCGAGATTACGATTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTT < SRR4302537.6259091/94‑1 (MQ=60)
CCAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTC > SRR4302537.4962445/1‑94 (MQ=60)
CAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCA < SRR4302537.5500096/94‑1 (MQ=60)
CAGATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCA > SRR4302537.2917545/1‑94 (MQ=60)
AGATACGAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCAC < SRR4302537.2940206/94‑1 (MQ=60)
ATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGC > SRR4302537.2061997/1‑94 (MQ=60)
ATACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGC < SRR4302537.5076626/94‑1 (MQ=60)
TACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCC > SRR4302537.5952837/1‑94 (MQ=60)
ACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCA > SRR4302537.990135/1‑94 (MQ=60)
ACCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCA > SRR4302537.711967/1‑94 (MQ=60)
CCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAA < SRR4302537.3229897/94‑1 (MQ=60)
CCAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAA < SRR4302537.1745691/94‑1 (MQ=60)
CAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAAC < SRR4302537.1988208/94‑1 (MQ=60)
CAACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAAC < SRR4302537.2979505/94‑1 (MQ=60)
AACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACC > SRR4302537.2371023/1‑94 (MQ=60)
ACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCA > SRR4302537.2118777/1‑94 (MQ=60)
ACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCA > SRR4302537.1249997/1‑94 (MQ=60)
ACCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCA > SRR4302537.5590244/1‑94 (MQ=60)
CCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCAT < SRR4302537.4769542/94‑1 (MQ=60)
CCATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCAT > SRR4302537.1717970/1‑94 (MQ=60)
CATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATC > SRR4302537.5704400/1‑94 (MQ=60)
CATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATC < SRR4302537.6017983/94‑1 (MQ=60)
ATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCG < SRR4302537.3442181/94‑1 (MQ=60)
ATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCG > SRR4302537.4490144/1‑94 (MQ=60)
ATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCG < SRR4302537.4852111/94‑1 (MQ=60)
ATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCG < SRR4302537.220570/94‑1 (MQ=60)
ATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCG < SRR4302537.5022427/94‑1 (MQ=60)
ATGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCG < SRR4302537.5605778/94‑1 (MQ=60)
TGCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGG < SRR4302537.459999/94‑1 (MQ=60)
|
CTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGG > NC_000913/3464839‑3465024
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
