Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,461,973	T→C	C140R (TGC→CGC)	yheK →	putative export protein K

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,461,973	0	T	C	99.1%	1975.1 / 2.3	576	C140R (TGC→CGC)	yheK	putative export protein K
Reads supporting (aligned to +/- strand): ref base T (4/1); new base C (316/255); total (320/256)
Fisher's exact test for biased strand distribution p-value = 3.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.19e-01

Only 100 of 607 total aligned reads displayed.

GGTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCTGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAAC  >  NC_000913/3461882‑3462063

 gTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGgccgct                                                                                         >  2:8761444/1‑94 (MQ=255)

 gTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGgccgct                                                                                         <  1:6737853/94‑1 (MQ=255)

 gTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGgccgct                                                                                         >  2:6684924/1‑94 (MQ=255)

  tGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTa                                                                                        <  2:6082490/94‑1 (MQ=255)

   gATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTAt                                                                                       >  1:7704063/1‑94 (MQ=255)

     tAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCt                                                                                     >  1:2064663/1‑94 (MQ=255)

     aaGGCATTCAGTCTGAGAAACACAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCt                                                                                     <  1:8660636/93‑1 (MQ=255)

      aGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCtt                                                                                    >  2:966130/1‑94 (MQ=255)

        gCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTcc                                                                                  >  1:7894514/1‑94 (MQ=255)

         cATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTccc                                                                                 >  1:8495387/1‑94 (MQ=255)

         cATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTccc                                                                                 >  2:1306120/1‑94 (MQ=255)

         cATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTccc                                                                                 <  1:3035316/94‑1 (MQ=255)

          cttCAGTCGGAGAAACGCAGTCGCTATCTTCAGCGGTTACAGACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCt                                                                                <  2:3184062/93‑1 (MQ=255)

          aTTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTccca                                                                                <  1:9085570/94‑2 (MQ=255)

           ttCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTg                                                                               >  1:8086876/1‑94 (MQ=255)

           ttCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTg                                                                               >  1:3384999/1‑94 (MQ=255)

           ttCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTg                                                                               <  2:7435388/94‑1 (MQ=255)

             cAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTggg                                                                             >  2:2187451/1‑94 (MQ=255)

                 cGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGt                                                                         >  2:6844469/1‑94 (MQ=255)

                 cGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGt                                                                         >  1:4635132/1‑94 (MQ=255)

                  ggAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTa                                                                        <  2:5001816/94‑1 (MQ=255)

                     gaAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGAt                                                                     <  1:7020164/94‑1 (MQ=255)

                      aaaCTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATa                                                                    >  1:4060738/1‑94 (MQ=255)

                      aaaCTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATa                                                                    <  1:9204453/94‑1 (MQ=255)

                      aaaCTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATa                                                                    >  2:3406745/1‑94 (MQ=255)

                      aaaCTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATa                                                                    >  2:8594388/1‑94 (MQ=255)

                       agcTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAg                                                                   <  1:7324258/92‑1 (MQ=255)

                       aaCTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAg                                                                   <  1:4427919/94‑1 (MQ=255)

                         cTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCt                                                                 >  1:7202191/1‑94 (MQ=255)

                         cTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCt                                                                 >  1:10230932/1‑94 (MQ=255)

                         cTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGAAGTTAGcg                                                                 >  2:587487/1‑93 (MQ=255)

                            aGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGa                                                              >  2:2399792/1‑94 (MQ=255)

                            aGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGa                                                              >  1:2651064/1‑94 (MQ=255)

                             gTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGAc                                                             >  2:2601747/1‑94 (MQ=255)

                             gTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGAc                                                             >  1:5116038/1‑94 (MQ=255)

                              tCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGAct                                                            <  1:2192480/94‑1 (MQ=255)

                               tgcgaTCTGGAGCGTTTGCATCCTGCCGGACTCAACGTGACGCGGTTTTTGCCAGATGGCCGCGATCTTCCCTGGGAAGTAGATAGCTGGActc                                                           <  1:1102680/90‑1 (MQ=255)

                                 cTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTg                                                         <  1:9941269/94‑1 (MQ=255)

                                 cTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTg                                                         >  1:9476157/1‑94 (MQ=255)

                                 cTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTg                                                         <  2:8421696/94‑1 (MQ=255)

                                  tATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTgg                                                        <  1:7456968/94‑1 (MQ=255)

                                   aTCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGATGGACTCTGGt                                                       >  1:1363067/1‑94 (MQ=255)

                                     cgtGAGCGCTTACATACTGCCGGACTCAACGTGACTCAGTTTTTGCCAGATGGCCGCAATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTa                                                     <  1:1827989/92‑1 (MQ=255)

                                     cTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTa                                                     >  1:4536696/1‑94 (MQ=255)

                                     cTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTa                                                     >  1:3794722/1‑94 (MQ=255)

                                      ttGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTaa                                                    <  1:2577230/94‑1 (MQ=255)

                                         aGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCa                                                 <  2:2983983/94‑1 (MQ=255)

                                           cGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGTGAAGTAGATAGCTGGACTCTGGTTAACCAGc                                               >  1:1471706/1‑94 (MQ=255)

                                           cGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGc                                               >  2:1645798/1‑94 (MQ=255)

                                            gTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCa                                              >  2:8903055/1‑94 (MQ=255)

                                             tttACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCaa                                             >  1:5740386/1‑94 (MQ=255)

                                               tACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAAc                                           <  1:5607293/94‑1 (MQ=255)

                                               tACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAAc                                           <  2:1068950/94‑1 (MQ=255)

                                               tACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAAc                                           <  1:5331713/94‑1 (MQ=255)

                                                aCATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACa                                          >  1:1602812/1‑94 (MQ=255)

                                                aCATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACa                                          <  1:1040551/94‑1 (MQ=255)

                                                  aTACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAg                                        >  1:492617/1‑94 (MQ=255)

                                                    aCTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCt                                      >  1:634016/1‑94 (MQ=255)

                                                     cTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTg                                     <  2:5352032/94‑1 (MQ=255)

                                                     cTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTg                                     <  2:4052490/94‑1 (MQ=255)

                                                     cTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACAAGCAAACAAGCTg                                     >  2:1434904/1‑94 (MQ=255)

                                                      tGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCCgg                                    >  2:5553990/1‑94 (MQ=255)

                                                       gCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGc                                   <  1:6558353/94‑1 (MQ=255)

                                                        ccGGACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCt                                  >  2:4427119/1‑94 (MQ=255)

                                                          ggACTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCa                                >  2:7075187/1‑94 (MQ=255)

                                                            aCTCAACGTGACGCGGGTTTTGCCAGATGGCTGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCAtt                              >  2:1536599/1‑94 (MQ=255)

                                                            aCTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCAtt                              >  2:5478228/1‑94 (MQ=255)

                                                             cTCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTc                             <  1:2903944/94‑1 (MQ=255)

                                                              tCAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCg                            <  2:7734484/94‑1 (MQ=255)

                                                               cAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGc                           >  2:10399957/1‑94 (MQ=255)

                                                               cAACGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGc                           <  1:6449420/94‑1 (MQ=255)

                                                                aaCGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCa                          <  1:3856074/94‑1 (MQ=255)

                                                                aaCGTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCa                          <  2:522725/94‑1 (MQ=255)

                                                                   gTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTg                       >  2:9591016/1‑94 (MQ=255)

                                                                   gTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTg                       <  2:3532621/94‑1 (MQ=255)

                                                                   gTGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTg                       >  2:4634373/1‑94 (MQ=255)

                                                                    tGACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGc                      <  1:6015714/94‑1 (MQ=255)

                                                                     gACGCGGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGcc                     >  1:10010826/1‑94 (MQ=255)

                                                                       cgcgGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGc                   >  1:3503824/1‑94 (MQ=255)

                                                                       cgcgGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGc                   >  2:6494872/1‑94 (MQ=255)

                                                                        gcgGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGca                  >  2:7943196/1‑94 (MQ=255)

                                                                         cgGGTTTTGCCAGATGGCTGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGcac                 >  1:4799963/1‑94 (MQ=255)

                                                                         cgGGTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACTAGCAAACATGCTGGCTCATTCGCAGTGCCGcac                 >  2:9400514/1‑94 (MQ=255)

                                                                          gggTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGcaca                >  2:988087/1‑94 (MQ=255)

                                                                           ggTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACAt               <  2:3800153/94‑1 (MQ=255)

                                                                           ggTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACAt               <  1:8368212/94‑1 (MQ=255)

                                                                           ggTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACAt               <  1:4278177/94‑1 (MQ=255)

                                                                           ggTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACAt               <  1:9314634/94‑1 (MQ=255)

                                                                            gTTTTGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATg              <  2:1798705/94‑1 (MQ=255)

                                                                             gtttGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGc             <  2:2912258/93‑1 (MQ=255)

                                                                              tttGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGcc            >  2:1985865/1‑94 (MQ=255)

                                                                               ttGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCt           <  2:8248407/94‑1 (MQ=255)

                                                                                tGCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCtt          <  1:9629159/94‑1 (MQ=255)

                                                                                 gCCAGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTc         >  2:5759907/1‑94 (MQ=255)

                                                                                    aGATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAAc      <  2:1101841/94‑1 (MQ=255)

                                                                                     gATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGTCTTCAACg     <  1:2367328/94‑1 (MQ=255)

                                                                                     gATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACg     <  1:9734169/94‑1 (MQ=255)

                                                                                     gATGGCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACg     <  2:515281/94‑1 (MQ=255)

                                                                                        ggCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAAc  <  1:3708020/94‑1 (MQ=255)

                                                                                        ggCCGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAAc  >  1:8893435/1‑94 (MQ=255)

GGTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCTGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAAC  >  NC_000913/3461882‑3462063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCAATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTTC  >  NC_000913/3467229‑3467415

GTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCG                                                                                               <  SRR4302545.2128347/94‑1 (MQ=60)

  GTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAT                                                                                             >  SRR4302545.4262562/1‑94 (MQ=60)

  GTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAT                                                                                             <  SRR4302545.1564763/94‑1 (MQ=60)

  GTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAT                                                                                             >  SRR4302545.6348494/1‑94 (MQ=60)

   TATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATT                                                                                            <  SRR4302545.4380375/94‑1 (MQ=60)

   TATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATT                                                                                            >  SRR4302545.7500109/1‑94 (MQ=60)

   TATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATT                                                                                            <  SRR4302545.8936951/94‑1 (MQ=60)

    ATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTT                                                                                           <  SRR4302545.6862567/94‑1 (MQ=60)

    ATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTT                                                                                           <  SRR4302545.2312236/94‑1 (MQ=60)

    ATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTT                                                                                           >  SRR4302545.765421/1‑94 (MQ=60)

    ATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTT                                                                                           >  SRR4302545.10011305/1‑94 (MQ=60)

     TTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTG                                                                                          <  SRR4302545.9775004/94‑1 (MQ=60)

     TTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTG                                                                                          <  SRR4302545.9738219/94‑1 (MQ=60)

      TGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGT                                                                                         <  SRR4302545.8001173/94‑1 (MQ=60)

       tgCAAACTGACTAATTTCAGCAGCTGTTGCAGTAAGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTA                                                                                        <  SRR4302545.8321006/92‑1 (MQ=60)

       GCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTA                                                                                        <  SRR4302545.1546194/94‑1 (MQ=60)

       GCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTA                                                                                        <  SRR4302545.9260457/94‑1 (MQ=60)

       GCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTA                                                                                        >  SRR4302545.3495184/1‑94 (MQ=60)

       GCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTGTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTA                                                                                        <  SRR4302545.1546193/94‑1 (MQ=60)

        CCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAG                                                                                       >  SRR4302545.4874162/1‑94 (MQ=60)

        CCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAG                                                                                       <  SRR4302545.2641720/94‑1 (MQ=60)

         CAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGA                                                                                      >  SRR4302545.2766182/1‑94 (MQ=60)

         CAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGA                                                                                      <  SRR4302545.7103800/94‑1 (MQ=60)

         CAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGA                                                                                      <  SRR4302545.10263591/94‑1 (MQ=60)

          AAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGGA                                                                                     >  SRR4302545.6486339/1‑94 (MQ=60)

          AAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAA                                                                                     >  SRR4302545.3928607/1‑94 (MQ=60)

          AAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAA                                                                                     <  SRR4302545.9459918/94‑1 (MQ=60)

          AAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAA                                                                                     <  SRR4302545.158517/94‑1 (MQ=60)

          AAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAA                                                                                     <  SRR4302545.5184863/94‑1 (MQ=60)

           AACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAG                                                                                    >  SRR4302545.8531944/1‑94 (MQ=60)

           AACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAG                                                                                    <  SRR4302545.2652790/94‑1 (MQ=60)

           AACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACCCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAG                                                                                    <  SRR4302545.7155074/94‑1 (MQ=60)

           AACTGACTAATTTCAGCAGCTGGTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGCAGAAA                                                                                    >  SRR4302545.8866264/1‑94 (MQ=60)

            ACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGA                                                                                   >  SRR4302545.4464713/1‑94 (MQ=60)

            ACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGA                                                                                   >  SRR4302545.10030738/1‑94 (MQ=60)

             CTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAA                                                                                  >  SRR4302545.5791523/1‑94 (MQ=60)

             CTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGAGCGATTTGTAGAAGAA                                                                                  <  SRR4302545.1256086/94‑1 (MQ=60)

               GACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAC                                                                                <  SRR4302545.446998/94‑1 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGTGCGCTTTGTAGAAGCAACC                                                                               >  SRR4302545.5811002/1‑94 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               >  SRR4302545.5904084/1‑94 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               >  SRR4302545.5531096/1‑94 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               >  SRR4302545.5531097/1‑94 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               >  SRR4302545.5811001/1‑94 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               <  SRR4302545.6544565/94‑1 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               <  SRR4302545.734574/94‑1 (MQ=60)

                ACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACC                                                                               <  SRR4302545.9401263/94‑1 (MQ=60)

                 CTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCC                                                                              <  SRR4302545.8239374/94‑1 (MQ=60)

                 CTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCC                                                                              <  SRR4302545.2566788/94‑1 (MQ=60)

                    ATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACC                                                                           <  SRR4302545.3306693/94‑1 (MQ=60)

                     TTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCA                                                                          <  SRR4302545.9917851/94‑1 (MQ=60)

                     TTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCA                                                                          <  SRR4302545.10342873/94‑1 (MQ=60)

                      TTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAG                                                                         <  SRR4302545.10113413/94‑1 (MQ=60)

                      TTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAG                                                                         <  SRR4302545.1981144/94‑1 (MQ=60)

                      TTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAG                                                                         >  SRR4302545.2982849/1‑94 (MQ=60)

                      TTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAG                                                                         <  SRR4302545.4990800/94‑1 (MQ=60)

                       TCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGG                                                                        <  SRR4302545.9803508/94‑1 (MQ=60)

                        CAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCTGGCGATTTGTAGAAGAAACCCACCAGGC                                                                       >  SRR4302545.6189608/1‑94 (MQ=60)

                        CAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGC                                                                       <  SRR4302545.7419543/94‑1 (MQ=60)

                        CAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGC                                                                       >  SRR4302545.10341389/1‑94 (MQ=60)

                         AGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCCCCAGGCA                                                                      <  SRR4302545.3479439/94‑1 (MQ=60)

                          GCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCAT                                                                     >  SRR4302545.10261385/1‑94 (MQ=60)

                            AGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTT                                                                   >  SRR4302545.2979233/1‑94 (MQ=60)

                            AGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTT                                                                   <  SRR4302545.9415143/94‑1 (MQ=60)

                             GCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTT                                                                  <  SRR4302545.10667836/94‑1 (MQ=60)

                             GCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTT                                                                  <  SRR4302545.4571169/94‑1 (MQ=60)

                             GCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTT                                                                  >  SRR4302545.6246920/1‑94 (MQ=60)

                              CTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTC                                                                 <  SRR4302545.4616677/94‑1 (MQ=60)

                              CTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTC                                                                 >  SRR4302545.427723/1‑94 (MQ=60)

                               TGTTGCGGTACGCTTTAAACGCCTCGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAATCCCACCAGGCATTTTCA                                                                <  SRR4302545.1213721/94‑1 (MQ=60)

                               TGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCA                                                                >  SRR4302545.372427/1‑94 (MQ=60)

                               TGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCA                                                                <  SRR4302545.1213722/94‑1 (MQ=60)

                               TGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCA                                                                <  SRR4302545.640761/94‑1 (MQ=60)

                               TGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCA                                                                <  SRR4302545.948396/94‑1 (MQ=60)

                                GTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCAT                                                               >  SRR4302545.9399660/1‑94 (MQ=60)

                                GTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCAT                                                               >  SRR4302545.7180705/1‑94 (MQ=60)

                                GTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCAT                                                               <  SRR4302545.2111544/94‑1 (MQ=60)

                                 TTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATA                                                              <  SRR4302545.3719787/94‑1 (MQ=60)

                                 TTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATA                                                              <  SRR4302545.3294977/94‑1 (MQ=60)

                                 TTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATA                                                              <  SRR4302545.6851614/94‑1 (MQ=60)

                                 TTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGACATTTTCATA                                                              <  SRR4302545.6787262/94‑1 (MQ=60)

                                  TGCGTTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAA                                                             <  SRR4302545.9543969/94‑1 (MQ=60)

                                  TGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAA                                                             <  SRR4302545.1136747/94‑1 (MQ=60)

                                  TGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAA                                                             <  SRR4302545.6324750/94‑1 (MQ=60)

                                  TGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAA                                                             <  SRR4302545.6182371/94‑1 (MQ=60)

                                    CGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAT                                                           >  SRR4302545.6019611/1‑94 (MQ=60)

                                    CGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAT                                                           >  SRR4302545.3819353/1‑94 (MQ=60)

                                     GGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATT                                                          <  SRR4302545.5662909/94‑1 (MQ=60)

                                     GGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATT                                                          >  SRR4302545.7596200/1‑94 (MQ=60)

                                      GTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTT                                                         >  SRR4302545.8709918/1‑94 (MQ=60)

                                      GTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTCTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTT                                                         <  SRR4302545.6482308/94‑1 (MQ=60)

                                       TACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTT                                                        <  SRR4302545.7055881/94‑1 (MQ=60)

                                        ACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTG                                                       <  SRR4302545.2087159/94‑1 (MQ=60)

                                        ACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTG                                                       <  SRR4302545.5832050/94‑1 (MQ=60)

                                        ACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTG                                                       >  SRR4302545.9307499/1‑94 (MQ=60)

                                        ACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTG                                                       <  SRR4302545.4323965/94‑1 (MQ=60)

                                         CGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGC                                                      <  SRR4302545.2350927/94‑1 (MQ=60)

                                          GCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCC                                                     <  SRR4302545.8648423/94‑1 (MQ=60)

                                           CTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCA                                                    <  SRR4302545.6156076/94‑1 (MQ=60)

                                            TTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTGGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCAT                                                   <  SRR4302545.8515981/94‑1 (MQ=60)

                                            TTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCAT                                                   <  SRR4302545.5762067/94‑1 (MQ=60)

                                             TTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATC                                                  <  SRR4302545.6404221/94‑1 (MQ=60)

                                             TTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATC                                                  <  SRR4302545.8422791/94‑1 (MQ=60)

                                              TAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCG                                                 >  SRR4302545.1020723/1‑94 (MQ=60)

                                              TAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCG                                                 <  SRR4302545.5380284/94‑1 (MQ=60)

                                              TAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCG                                                 <  SRR4302545.4691925/94‑1 (MQ=60)

                                              TAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCG                                                 <  SRR4302545.2087817/94‑1 (MQ=60)

                                              TAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCG                                                 <  SRR4302545.4197346/94‑1 (MQ=60)

                                               AAACGCCGCGGGTTAGTTGCATCATTTGCTTTCGTTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGA                                                <  SRR4302545.10395648/94‑1 (MQ=60)

                                               AAACGCCACGGGTTAGTTGCATCATGTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGA                                                <  SRR4302545.4619664/94‑1 (MQ=60)

                                                 ACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAA                                              <  SRR4302545.948418/94‑1 (MQ=60)

                                                  CGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAA                                             >  SRR4302545.7391964/1‑94 (MQ=60)

                                                   GCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAAT                                            <  SRR4302545.3170408/94‑1 (MQ=60)

                                                     CACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAACCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAA                                          <  SRR4302545.6712005/94‑1 (MQ=60)

                                                     CACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAA                                          >  SRR4302545.3864861/1‑94 (MQ=60)

                                                     CACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAA                                          >  SRR4302545.4701446/1‑94 (MQ=60)

                                                     CACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAA                                          <  SRR4302545.1889826/94‑1 (MQ=60)

                                                      ACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAAC                                         <  SRR4302545.1666012/94‑1 (MQ=60)

                                                      ACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAAC                                         >  SRR4302545.8771641/1‑94 (MQ=60)

                                                      ACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAAC                                         <  SRR4302545.4531058/94‑1 (MQ=60)

                                                      ACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTGGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAAC                                         >  SRR4302545.6998808/1‑94 (MQ=60)

                                                       CGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACC                                        <  SRR4302545.10153491/94‑1 (MQ=60)

                                                       CGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACC                                        <  SRR4302545.6438611/94‑1 (MQ=60)

                                                        GGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCT                                       <  SRR4302545.9779812/94‑1 (MQ=60)

                                                         GGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTG                                      <  SRR4302545.3247381/94‑1 (MQ=60)

                                                         GGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTG                                      <  SRR4302545.10894631/94‑1 (MQ=60)

                                                         GGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTG                                      <  SRR4302545.9833125/94‑1 (MQ=60)

                                                         GGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTG                                      <  SRR4302545.812836/94‑1 (MQ=60)

                                                          GTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGA                                     <  SRR4302545.3310996/94‑1 (MQ=60)

                                                          GTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGA                                     <  SRR4302545.8155232/94‑1 (MQ=60)

                                                           TTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAT                                    <  SRR4302545.9080725/94‑1 (MQ=60)

                                                           TTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAT                                    >  SRR4302545.6383602/1‑94 (MQ=60)

                                                           TTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAT                                    <  SRR4302545.2395778/94‑1 (MQ=60)

                                                             AGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATAT                                  <  SRR4302545.9100913/94‑1 (MQ=60)

                                                             AGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATAT                                  <  SRR4302545.785648/94‑1 (MQ=60)

                                                               TTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTT                                <  SRR4302545.8915466/94‑1 (MQ=60)

                                                               TTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTT                                <  SRR4302545.1915991/94‑1 (MQ=60)

                                                                TGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTA                               >  SRR4302545.3015721/1‑94 (MQ=60)

                                                                TGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTA                               <  SRR4302545.1601622/94‑1 (MQ=60)

                                                                 TCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTAT                              <  SRR4302545.1508130/94‑1 (MQ=60)

                                                                 GCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAATCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTAT                              <  SRR4302545.4618242/94‑1 (MQ=60)

                                                                 GCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTAT                              <  SRR4302545.7945213/94‑1 (MQ=60)

                                                                 GCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTAT                              <  SRR4302545.7039899/94‑1 (MQ=60)

                                                                 GCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTAT                              <  SRR4302545.5188324/94‑1 (MQ=60)

                                                                   ATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAATCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTA                            <  SRR4302545.1216085/94‑1 (MQ=60)

                                                                   ATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTA                            >  SRR4302545.4624472/1‑94 (MQ=60)

                                                                   ATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTA                            <  SRR4302545.1535856/94‑1 (MQ=60)

                                                                    TCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAACCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTAC                           <  SRR4302545.1204764/94‑1 (MQ=60)

                                                                    TCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTAC                           <  SRR4302545.5723266/94‑1 (MQ=60)

                                                                    TCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTAC                           <  SRR4302545.5723540/94‑1 (MQ=60)

                                                                     CATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACC                          <  SRR4302545.6350692/94‑1 (MQ=60)

                                                                      ATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCA                         <  SRR4302545.10598373/94‑1 (MQ=60)

                                                                      ATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCA                         <  SRR4302545.3209275/94‑1 (MQ=60)

                                                                      ATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCA                         <  SRR4302545.4610557/94‑1 (MQ=60)

                                                                      ATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCA                         <  SRR4302545.4610556/94‑1 (MQ=60)

                                                                       TTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAACCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCAC                        <  SRR4302545.1690446/94‑1 (MQ=60)

                                                                       TTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCAC                        <  SRR4302545.716508/94‑1 (MQ=60)

                                                                         TGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCT                      <  SRR4302545.7654286/94‑1 (MQ=60)

                                                                         TGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCT                      <  SRR4302545.5801785/94‑1 (MQ=60)

                                                                         TGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCT                      <  SRR4302545.6005408/94‑1 (MQ=60)

                                                                         TGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTACATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCT                      <  SRR4302545.4053851/94‑1 (MQ=60)

                                                                          TCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT                     <  SRR4302545.1946374/94‑1 (MQ=60)

                                                                          GCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT                     <  SRR4302545.6958302/94‑1 (MQ=60)

                                                                           CTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTG                    <  SRR4302545.105707/94‑1 (MQ=60)

                                                                           CTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTG                    <  SRR4302545.5601621/94‑1 (MQ=60)

                                                                             TTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTT                  <  SRR4302545.4310011/94‑1 (MQ=60)

                                                                             TTCGCTTTTCCCGAGCGATTTGTAGAAGAAACCCAACAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTT                  >  SRR4302545.9476472/1‑94 (MQ=60)

                                                                              TCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTG                 >  SRR4302545.2529196/1‑94 (MQ=60)

                                                                              TCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTG                 <  SRR4302545.2231990/94‑1 (MQ=60)

                                                                              TCGCTTTCCCCGGGCGATTTGTAGAAGAAACCCGCCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTG                 <  SRR4302545.2390066/94‑1 (MQ=60)

                                                                               CGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGG                <  SRR4302545.1058589/94‑1 (MQ=60)

                                                                               CGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGG                <  SRR4302545.9142428/94‑1 (MQ=60)

                                                                                GCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGT               >  SRR4302545.4913982/1‑94 (MQ=60)

                                                                                 CTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTT              <  SRR4302545.4523737/94‑1 (MQ=60)

                                                                                 CTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTT              <  SRR4302545.7247077/94‑1 (MQ=60)

                                                                                   TTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTAT            <  SRR4302545.1912034/94‑1 (MQ=60)

                                                                                   TTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTAT            <  SRR4302545.7541988/94‑1 (MQ=60)

                                                                                    TTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATT           <  SRR4302545.1470266/94‑1 (MQ=60)

                                                                                    TCCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATT           <  SRR4302545.1470265/94‑1 (MQ=60)

                                                                                     TGCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTC          <  SRR4302545.6291974/94‑1 (MQ=60)

                                                                                     TCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTC          <  SRR4302545.10860999/94‑1 (MQ=60)

                                                                                     TCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTC          <  SRR4302545.6928181/94‑1 (MQ=60)

                                                                                       CCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCA        <  SRR4302545.10077914/94‑1 (MQ=60)

                                                                                       CCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCA        >  SRR4302545.2982412/1‑94 (MQ=60)

                                                                                       CCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCA        <  SRR4302545.4987483/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.5886089/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.2379421/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.5878512/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.8580873/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.7639230/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.8298129/94‑1 (MQ=60)

                                                                                        CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT       <  SRR4302545.8298130/94‑1 (MQ=60)

                                                                                         GGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATG      <  SRR4302545.7043644/94‑1 (MQ=60)

                                                                                         GGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATG      >  SRR4302545.1878715/1‑94 (MQ=60)

                                                                                          GGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGC     <  SRR4302545.7754446/94‑1 (MQ=60)

                                                                                           GCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCT    <  SRR4302545.1852634/94‑1 (MQ=60)

                                                                                            CGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTT   <  SRR4302545.9847933/94‑1 (MQ=60)

                                                                                             GATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTTC  <  SRR4302545.967896/94‑1 (MQ=60)

GTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCAATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTTC  >  NC_000913/3467229‑3467415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`